HHsearch results for GI: 254780799 and protein with PDBid: 1p9r_A

>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*

Probab=94.77  E-value=0.028  Score=35.10  Aligned_cols=59  Identities=29%  Similarity=0.576  Sum_probs=37.8

Q ss_pred             HCCCCCCCCEEEEECCCCCE--EEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEE-CCCHHHHHH
Q ss_conf             10456666667854100202--355304774067999999999998299578478885-231001110
Q gi|254780799|r  437 NLGKSIEGKPIIADLARMPH--LLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMI-DPKMLELSV  501 (806)
Q Consensus       437 aLGKdI~G~pvv~DLakMPH--LLIAGtTGSGKSV~iN~iI~SlLyk~~P~evklili-DPK~vEls~  501 (806)
                      .||-+-.-...+-.+...||  +||+|.||||||--+++|+-.+   .+|+ .+.+.| ||  +|.-.
T Consensus       148 ~Lg~~~~~~~~l~~~~~~~~GlilisGpTGSGKSTTl~a~l~~i---~~~~-r~IiTiEDP--vE~~~  209 (418)
T 1p9r_A          148 SLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQEL---NSSE-RNILTVEDP--IEFDI  209 (418)
T ss_dssp             GSCCCHHHHHHHHHHHTSSSEEEEEECSTTSCHHHHHHHHHHHH---CCTT-SCEEEEESS--CCSCC
T ss_pred             HCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH---CCCC-CEEEEEECC--CCCCC
T ss_conf             55996789999999985689779996799886417899998775---0698-359997067--32445