HHsearch results for GI: 254780799 and protein with PDBid: 2cvh_A

>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*

Probab=95.39  E-value=0.0084  Score=38.99  Aligned_cols=45  Identities=24%  Similarity=0.367  Sum_probs=34.4

Q ss_pred             CCEEEEEHHHHHHHHHHCC------CHHHHHHHHHHHHHHHCCEEEEEEEC
Q ss_conf             9868776344688887321------00588999999866414237999965
Q gi|254780799|r  589 MPYIVVVIDEMADLMMVAR------KDIESAVQRLAQMARASGIHVIMATQ  633 (806)
Q Consensus       589 lp~ivviiDElaDlmm~~~------~~ve~~i~rlaq~ara~GiHli~aTq  633 (806)
                      ..+-+||||=++.++....      .++...+.+|.+.|+-.|++.|+-.|
T Consensus       104 ~~~~liVIDsl~~~~~~~~~~~~~~~~~~~~~~~L~~~a~~~~~~vi~i~q  154 (220)
T 2cvh_A          104 SNFALVVVDSITAHYRAEENRSGLIAELSRQLQVLLWIARKHNIPVIVINQ  154 (220)
T ss_dssp             TTEEEEEEECCCCCTTGGGGSSTTHHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CCCEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf             573299833244231220141367899999999999999872977999964