HHsearch results for GI: 254780799 and protein with PDBid: 2oap_1
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus dsm 4304} PDB: 2oaq_1
Probab=95.03 E-value=0.0066 Score=39.76 Aligned_cols=161 Identities=15% Similarity=0.278 Sum_probs=73.7
Q ss_pred CCHHHHHHHHHHHHHHHHHCCC------CEEEEEEEE-C---CEEEEEE----EEECCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 3256654578999999742486------328998410-4---4244444----321478639999978899998863001
Q gi|254780799|r 327 FSPKVMQNNACTLKSVLSDFGI------QGEIVNVRP-G---PVITLYE----LEPAPGIKSSRIIGLSDDIARSMSAIS 392 (806)
Q Consensus 327 ~s~eeL~~nA~lLE~tL~dFGV------e~~Vv~v~p-G---PVVTrYE----i~PApGVKvSKI~nLadDIA~aLsa~s 392 (806)
++++..+.....|..-+-.||+ +-.|.+|+. | |+..++. +++..-..-..+.++..-|| ..+
T Consensus 113 ~~~~~~~~l~y~i~~~~~G~G~L~~ll~D~~V~DI~ing~~~~v~V~~r~~g~l~~~~~~~~e~l~~ii~rl~----~~~ 188 (511)
T 2oap_1 113 FTDNFYSRMLYYLFRDFFGYGLIDPLMEDTNVEDISCDGYNIPIFIYHQKYGNVETNIVLDQEKLDRMVLRLT----QRS 188 (511)
T ss_dssp -CTTTTHHHHHHHHHTTTSCGGGHHHHHCTTEEEEEECSTTCCCEEEETTTEEEEESCCCCHHHHHHHHHHHH----HHT
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEECCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHH----HHC
T ss_conf 8989999999999998638676665652798479999478876999983672899537899999999999999----873
Q ss_pred -CCCCCCCCCCEEEEEECCCCCCEEEEHHHCCC-------HHHHHCCCCCH-HHCCCCCCCCEEEEEC-----CCCCEEE
Q ss_conf -21000388612555302456623873423072-------13430221000-2104566666678541-----0020235
Q gi|254780799|r 393 -ARVAVIPRRNAIGIELPNDIRETVMLRDLIVS-------RVFEKNQCDLA-INLGKSIEGKPIIADL-----ARMPHLL 458 (806)
Q Consensus 393 -vRIapIPGK~~VGIEiPN~~r~~V~lreil~s-------~~f~~s~~~L~-iaLGKdI~G~pvv~DL-----akMPHLL 458 (806)
.+|.. +++.+--.+||..|-.+.+...... ..|... +++ .-|-+.=.=.+-.+++ ...--+|
T Consensus 189 g~~is~--~~P~~d~~l~dg~Ri~~~~~~~v~~~G~~~~IRk~~~~--~~tl~dLv~~G~~~~~~~~~l~~~v~~~~~il 264 (511)
T 2oap_1 189 GKHISI--ANPIVDATLPDGSRLQATFGTEVTPRGSSFTIRKFTIE--PLTPIDLIEKGTVPSGVLAYLWLAIEHKFSAI 264 (511)
T ss_dssp TCCCBT--TBCEEEEEETTTEEEEEECSSSSCTTCSEEEEEECCCC--CCCHHHHHHTTSSCHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCC--CCCCEEEEECCCCEEEEEECCCCCCCCCEEEEECCCCC--CCCHHHHHHCCCCHHHHHHHHHHHHHCCCEEE
T ss_conf 987322--68756899679976999965764799766999612877--69989997658982999999999986695599
Q ss_pred EEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHH
Q ss_conf 5304774067999999999998299578478885231001110
Q gi|254780799|r 459 IAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKMLELSV 501 (806)
Q Consensus 459 IAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~vEls~ 501 (806)
|+|.|||||+-.+|+++.. -|.+.|.+-|-- ..|+..
T Consensus 265 i~G~tgSGKTT~L~all~~-----i~~~~riitIEd-~~El~l 301 (511)
T 2oap_1 265 VVGETASGKTTTLNAIMMF-----IPPDAKVVSIED-TREIKL 301 (511)
T ss_dssp EEESTTSSHHHHHHHHGGG-----SCTTCCEEEEES-SCCCCC
T ss_pred EECCCCCCHHHHHHHHHHH-----HHHCCCEEEEEC-CCCCCC
T ss_conf 9899989889999999996-----454054145433-743214