HHsearch results for GI: 254780799 and protein with PDBid: 2q6t_A
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=95.97 E-value=0.1 Score=30.82 Aligned_cols=142 Identities=15% Similarity=0.153 Sum_probs=74.6
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHH-------HHHCCCCH--HHHCCCCCCHHHHHHHHHHHH
Q ss_conf 355304774067999999999998299578478885231001-------11027703--431223343045668999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKMLE-------LSVYDGIP--NLLTPVVTNPQKAVTVLKWLV 527 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~vE-------ls~Y~~iP--HLl~pVvTd~~kA~~aL~w~V 527 (806)
..|||.||.|||-....+...+.-+.. .+..++..=|=+ ++..-+|| ++..+-.++ .....+..+.
T Consensus 203 ~vi~a~pg~GKT~~~~~~a~~~a~~~g---~~v~~~slEm~~~~~~~r~~a~~~~i~~~~~~~~~~~~--~~~~~~~~~~ 277 (444)
T 2q6t_A 203 NIIAARPAMGKTAFALTIAQNAALKEG---VGVGIYSLEMPAAQLTLRMMCSEARIDMNRVRLGQLTD--RDFSRLVDVA 277 (444)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTC---CCEEEEESSSCHHHHHHHHHHHHTTCCTTTCCGGGCCH--HHHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHCC---CEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCH--HHHHHHHHHH
T ss_conf 999830466621888878999999779---94999858899999999999875288821222377627--7899999999
Q ss_pred HHHHHHHHHH-HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHC
Q ss_conf 9999999999-870899689999999988744786677544677654543222332232346986877634468888732
Q gi|254780799|r 528 CEMEERYQKM-SKIGVRNIDGFNLKVAQYHNTGKKFNRTVQTGFDRKTGEAIYETEHFDFQHMPYIVVVIDEMADLMMVA 606 (806)
Q Consensus 528 ~EMe~RY~l~-a~~~vRni~~yN~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~ivviiDElaDlmm~~ 606 (806)
.++.+ +.++ -...-.+++.-..+++..+..+ ..=+||||=+ .||...
T Consensus 278 ~~l~~-~~l~i~d~~~~t~~~i~~~~~~~~~~~------------------------------~~~~vviDyl-~~~~~~ 325 (444)
T 2q6t_A 278 SRLSE-APIYIDDTPDLTLMEVRARARRLVSQN------------------------------QVGLIIIDYL-QLMSGP 325 (444)
T ss_dssp HHHHT-SCEEEECCTTCBHHHHHHHHHHHHHHS------------------------------CCCEEEEECG-GGCBCC
T ss_pred HHHHC-CCEEEECCCCCCHHHHHHHHHHHHHCC------------------------------CCCEEEEEEH-HHHCCC
T ss_conf 99863-987996899999999999999866514------------------------------6785999624-542145
Q ss_pred C---------CHHHHHHHHHHHHHHHCCEEEEEEECCC
Q ss_conf 1---------0058899999986641423799996577
Q gi|254780799|r 607 R---------KDIESAVQRLAQMARASGIHVIMATQRP 635 (806)
Q Consensus 607 ~---------~~ve~~i~rlaq~ara~GiHli~aTqrP 635 (806)
. .+|.....+|.++|+--+||.|++.|-.
T Consensus 326 ~~~~~~~~~~~~i~~i~~~Lk~lA~~~~i~vi~~sqln 363 (444)
T 2q6t_A 326 GSGKSGENRQQEIAAISRGLKALARELGIPIIALSQLS 363 (444)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
T ss_conf 56776420999999999999999997398799985148