HHsearch results for GI: 254780799 and protein with PDBid: 2r6a_A
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=95.58 E-value=0.038 Score=34.09 Aligned_cols=143 Identities=15% Similarity=0.154 Sum_probs=75.7
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHH-------HHHCCCCH--HHHCCCCCCHHHHHHHHHHHH
Q ss_conf 355304774067999999999998299578478885231001-------11027703--431223343045668999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKMLE-------LSVYDGIP--NLLTPVVTNPQKAVTVLKWLV 527 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~vE-------ls~Y~~iP--HLl~pVvTd~~kA~~aL~w~V 527 (806)
..|||.||.|||-....|..-+.-+. ..+.+++..-|=+ ++...++| ++.++-.++- -...+..+.
T Consensus 206 ~vi~a~pg~GKT~~~~~~a~~~~~~~---g~~Vl~~SlEm~~~~~~~R~~a~~~~v~~~~i~~~~~~~~--~~~~~~~~~ 280 (454)
T 2r6a_A 206 IIVAARPSVGKTAFALNIAQNVATKT---NENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPE--DWGKLTMAM 280 (454)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHHS---SCCEEEEESSSCHHHHHHHHHHHHHTCCHHHHHTSCCCHH--HHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC---CCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHCCCCCCHH--HHHHHHHHH
T ss_conf 99995677653299998997576625---9807998078999999999999873356776346999878--999999999
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCC
Q ss_conf 99999999998708996899999999887447866775446776545432223322323469868776344688887321
Q gi|254780799|r 528 CEMEERYQKMSKIGVRNIDGFNLKVAQYHNTGKKFNRTVQTGFDRKTGEAIYETEHFDFQHMPYIVVVIDEMADLMMVAR 607 (806)
Q Consensus 528 ~EMe~RY~l~a~~~vRni~~yN~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~ivviiDElaDlmm~~~ 607 (806)
.++..+-=.+...+..+++.-..+++....+ ...-+||||=+-. |+..+
T Consensus 281 ~~~~~~~l~i~~~~~~~~~~i~~~~r~~~~~------------------------------~g~~~vviDyl~~-~~~~~ 329 (454)
T 2r6a_A 281 GSLSNAGIYIDDTPSIRVSDIRAKCRRLKQE------------------------------SGLGMIVIDYLQL-IQGSG 329 (454)
T ss_dssp HHHHSSCEEEECCTTCCHHHHHHHHHHHHTT------------------------------TCCCEEEEECGGG-SCCSC
T ss_pred HHHHHCCEEEECCCCCCHHHHHHHHHHHHHH------------------------------CCCCEEEEEEHHH-CCCCC
T ss_conf 9876366067336676468999999999985------------------------------4996899974442-04678
Q ss_pred -------CHHHHHHHHHHHHHHHCCEEEEEEECCC
Q ss_conf -------0058899999986641423799996577
Q gi|254780799|r 608 -------KDIESAVQRLAQMARASGIHVIMATQRP 635 (806)
Q Consensus 608 -------~~ve~~i~rlaq~ara~GiHli~aTqrP 635 (806)
.+|.....+|.++|+--++|.|+.+|-.
T Consensus 330 ~~~~~~~~~i~~i~~~Lk~lA~~~~v~vi~~sqln 364 (454)
T 2r6a_A 330 RSKENRQQEVSEISRSLKALARELEVPVIALSQLS 364 (454)
T ss_dssp C----CHHHHHHHHHHHHHHHHHHTCCEEEEECCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
T ss_conf 88866999999999999999999798599981568