HHSEARCH alignment of GI: 254780799 and SCOP domain: d2j5pa1

Alignment
>d2j5pa1 a.4.5.67 (A:1261-1329) DNA translocase FtsK {Escherichia coli [TaxId: 562]}
Probab=99.90  E-value=3.9e-25  Score=204.46  Aligned_cols=69  Identities=43%  Similarity=0.650  Sum_probs=65.2

Q ss_pred             CCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCCEEEECHHHH
Q ss_conf             887777038999999996598500014222001177899999999977986802278872673171253
Q gi|254780799|r  735 NSSVADDLYKQAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGPASSTGKREILISSMEE  803 (806)
Q Consensus       735 ~~~~~d~l~~~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~~g~~~r~vl~~~~~~  803 (806)
                      ++++.||||++|+++|++++++|||+|||||||||||||||||+||++|||||++|+||||||++++.|
T Consensus         1 G~~~~D~ly~~a~~~V~~~~kaS~S~lQR~l~IGYnRAariid~LE~~GiVsp~~~~~~ReVL~~~~~~   69 (69)
T d2j5pa1           1 GAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD   69 (69)
T ss_dssp             CTTTSCTTHHHHHHHHHHTTEEEHHHHHHHHTCCHHHHHHHHHHHHHHTSBCCCCSSSEEEBCSCCSCC
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCC
T ss_conf             986422899999999998086448999999712522999999999988768877799799672899887


SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: FtsK C-terminal domain-like
domain: DNA translocase FtsK
species: Escherichia coli [TaxId: 562]