Query gi|254780799|ref|YP_003065212.1| DNA translocase FtsK [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 806
No_of_seqs 311 out of 1864
Neff 8.3
Searched_HMMs 13730
Date Wed Jun 1 06:40:26 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780799.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2j5pa1 a.4.5.67 (A:1261-1329) 99.9 3.9E-25 2.8E-29 204.5 4.9 69 735-803 1-69 (69)
2 d2ve8a1 a.4.5.67 (A:745-811) D 99.9 1.5E-24 1.1E-28 200.0 4.7 67 738-804 1-67 (67)
3 d1e9ra_ c.37.1.11 (A:) Bacteri 98.9 4.5E-09 3.3E-13 84.1 8.4 64 589-658 275-344 (433)
4 d1g6oa_ c.37.1.11 (A:) Hexamer 97.6 0.00011 8.1E-09 51.3 7.6 94 455-561 167-261 (323)
5 d1cr2a_ c.37.1.11 (A:) Gene 4 96.5 0.016 1.2E-06 35.1 9.5 43 592-635 149-197 (277)
6 d1p9ra_ c.37.1.11 (A:) Extrace 94.6 0.011 7.9E-07 36.4 3.1 57 437-499 139-198 (401)
7 d1nlfa_ c.37.1.11 (A:) Hexamer 94.4 0.0097 7E-07 36.7 2.4 45 591-635 133-180 (274)
8 d1tf7a2 c.37.1.11 (A:256-497) 94.4 0.16 1.1E-05 27.7 8.5 47 590-636 116-163 (242)
9 d1sxjd2 c.37.1.20 (D:26-262) R 93.6 0.03 2.2E-06 33.1 3.6 78 587-712 105-182 (237)
10 d1h65a_ c.37.1.8 (A:) Chloropl 93.2 0.027 2E-06 33.4 2.8 21 455-475 33-53 (257)
11 d2p67a1 c.37.1.10 (A:1-327) LA 92.9 0.087 6.4E-06 29.6 5.1 41 454-496 54-94 (327)
12 d1a5ta2 c.37.1.20 (A:1-207) de 91.1 0.065 4.7E-06 30.5 2.8 31 452-482 21-52 (207)
13 d1tf7a1 c.37.1.11 (A:14-255) C 90.9 0.17 1.2E-05 27.5 4.6 45 593-637 128-174 (242)
14 d1sxjc2 c.37.1.20 (C:12-238) R 90.8 0.097 7.1E-06 29.2 3.4 29 452-480 33-61 (227)
15 d1svia_ c.37.1.8 (A:) Probable 89.7 0.11 8.2E-06 28.7 3.0 23 453-475 22-44 (195)
16 d1ub9a_ a.4.5.28 (A:) Hypothet 89.3 0.28 2E-05 25.9 4.7 61 740-800 15-76 (100)
17 d1iqpa2 c.37.1.20 (A:2-232) Re 89.1 0.15 1.1E-05 27.7 3.3 28 453-480 44-71 (231)
18 d1sxjb2 c.37.1.20 (B:7-230) Re 89.0 0.22 1.6E-05 26.6 4.0 33 453-485 35-67 (224)
19 d1w36d1 c.37.1.19 (D:2-360) Ex 89.0 0.23 1.7E-05 26.5 4.1 138 455-638 164-304 (359)
20 d1wp9a1 c.37.1.19 (A:1-200) pu 88.9 0.28 2.1E-05 25.8 4.5 178 418-659 4-192 (200)
21 d1tq4a_ c.37.1.8 (A:) Interfer 88.8 0.13 9.8E-06 28.2 2.9 20 456-475 58-77 (400)
22 d1fnna2 c.37.1.20 (A:1-276) CD 87.7 0.55 4E-05 23.6 5.4 39 452-493 41-79 (276)
23 d2akab1 c.37.1.8 (B:6-304) Dyn 87.6 0.18 1.3E-05 27.3 2.9 24 453-476 25-48 (299)
24 d1vmaa2 c.37.1.10 (A:82-294) G 87.0 0.87 6.3E-05 22.1 6.4 75 452-530 8-89 (213)
25 d2p6ra3 c.37.1.19 (A:1-202) He 86.6 0.36 2.6E-05 25.0 4.0 24 456-479 42-65 (202)
26 d2i3ba1 c.37.1.11 (A:1-189) Ca 86.6 0.45 3.3E-05 24.3 4.4 38 456-495 3-40 (189)
27 d1jwyb_ c.37.1.8 (B:) Dynamin 86.1 0.25 1.8E-05 26.1 2.9 23 454-476 24-46 (306)
28 d1es6a2 b.31.1.1 (A:201-321) E 85.5 0.11 8E-06 28.8 0.9 60 373-447 36-98 (121)
29 d1njfa_ c.37.1.20 (A:) delta p 85.1 0.3 2.2E-05 25.6 2.9 32 453-484 32-64 (239)
30 d2eyqa3 c.37.1.19 (A:546-778) 84.3 0.37 2.7E-05 24.9 3.1 135 446-637 66-215 (233)
31 d1okkd2 c.37.1.10 (D:97-303) G 84.1 1.1 7.9E-05 21.4 5.4 73 458-532 10-86 (207)
32 d1j8yf2 c.37.1.10 (F:87-297) G 83.9 1.1 7.8E-05 21.4 5.3 74 453-528 10-88 (211)
33 d1np6a_ c.37.1.10 (A:) Molybdo 83.4 0.47 3.4E-05 24.1 3.3 39 454-496 2-40 (170)
34 d1n0wa_ c.37.1.11 (A:) DNA rep 83.0 0.13 9.6E-06 28.3 0.4 28 608-635 146-173 (242)
35 d2rbka1 c.108.1.10 (A:2-261) S 82.7 1.3 9.6E-05 20.8 9.3 78 609-715 23-102 (260)
36 d1odfa_ c.37.1.6 (A:) Hypothet 82.6 0.67 4.9E-05 23.0 3.9 39 454-493 26-67 (286)
37 d2bmfa2 c.37.1.14 (A:178-482) 82.3 0.23 1.7E-05 26.4 1.4 103 591-715 101-204 (305)
38 g1f2t.1 c.37.1.12 (A:,B:) Rad5 81.9 0.41 3E-05 24.6 2.5 28 455-482 23-51 (292)
39 d2fz4a1 c.37.1.19 (A:24-229) D 81.8 0.58 4.2E-05 23.4 3.3 20 455-474 86-105 (206)
40 d1ly1a_ c.37.1.1 (A:) Polynucl 81.4 0.5 3.6E-05 23.9 2.8 24 454-477 1-25 (152)
41 d1sxja2 c.37.1.20 (A:295-547) 80.6 0.5 3.6E-05 23.9 2.6 26 450-475 48-73 (253)
42 d2fbia1 a.4.5.28 (A:5-140) Pro 80.3 0.62 4.5E-05 23.2 3.0 59 745-803 34-93 (136)
43 d1r0wa_ c.37.1.12 (A:) Cystic 80.2 1.1 8.1E-05 21.3 4.3 49 443-496 47-99 (281)
44 d1ixsb2 c.37.1.20 (B:4-242) Ho 80.1 0.5 3.6E-05 23.9 2.5 23 454-476 35-57 (239)
45 g1xew.1 c.37.1.12 (X:,Y:) Smc 79.7 0.85 6.2E-05 22.2 3.6 43 590-636 246-288 (329)
46 d1sfxa_ a.4.5.50 (A:) Hypothet 79.2 1.2 8.5E-05 21.2 4.1 57 744-800 23-82 (109)
47 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 78.7 1.8 0.00013 19.8 6.2 11 339-349 364-374 (623)
48 d1ye8a1 c.37.1.11 (A:1-178) Hy 78.5 0.68 4.9E-05 22.9 2.8 23 456-478 2-24 (178)
49 d2qm8a1 c.37.1.10 (A:5-327) Me 78.4 0.8 5.8E-05 22.4 3.1 39 455-495 52-90 (323)
50 d2fnaa2 c.37.1.20 (A:1-283) Ar 78.3 1.8 0.00013 19.7 9.4 44 591-636 137-180 (283)
51 d2gj8a1 c.37.1.8 (A:216-376) P 78.2 0.73 5.3E-05 22.7 2.8 20 456-475 3-22 (161)
52 d1pjra1 c.37.1.19 (A:1-318) DE 78.2 1.8 0.00013 19.7 5.1 39 456-494 26-66 (318)
53 d1lv7a_ c.37.1.20 (A:) AAA dom 78.1 1.8 0.00013 19.7 8.0 43 454-504 45-87 (256)
54 d1nrjb_ c.37.1.8 (B:) Signal r 78.1 0.72 5.2E-05 22.7 2.8 23 454-476 3-25 (209)
55 d2qy9a2 c.37.1.10 (A:285-495) 77.6 1.9 0.00014 19.6 4.8 162 454-654 8-186 (211)
56 d1uj2a_ c.37.1.6 (A:) Uridine- 77.5 0.71 5.1E-05 22.8 2.6 24 455-478 2-26 (213)
57 d1rifa_ c.37.1.23 (A:) DNA hel 77.3 1.8 0.00013 19.7 4.7 40 454-495 128-167 (282)
58 d1t5la1 c.37.1.19 (A:2-414) Nu 77.3 1 7.4E-05 21.6 3.4 30 512-541 248-277 (413)
59 d1pkla2 c.1.12.1 (A:1-87,A:187 77.2 0.33 2.4E-05 25.3 0.8 117 520-661 95-226 (258)
60 d1w1wa_ c.37.1.12 (A:) Smc hea 76.5 0.71 5.2E-05 22.8 2.4 43 589-636 355-397 (427)
61 d1sq5a_ c.37.1.6 (A:) Pantothe 76.2 1.4 0.0001 20.6 3.8 109 427-577 61-174 (308)
62 d1q0ua_ c.37.1.19 (A:) Probabl 75.8 0.52 3.8E-05 23.8 1.5 23 456-478 40-62 (209)
63 d1yksa1 c.37.1.14 (A:185-324) 75.6 1.1 8E-05 21.3 3.2 42 590-635 98-139 (140)
64 d2bv6a1 a.4.5.28 (A:5-140) Tra 75.6 0.83 6E-05 22.3 2.5 55 745-799 38-93 (136)
65 d1in4a2 c.37.1.20 (A:17-254) H 75.6 1.1 7.8E-05 21.5 3.1 25 454-478 35-59 (238)
66 d1wf3a1 c.37.1.8 (A:3-180) GTP 75.5 0.86 6.2E-05 22.2 2.6 21 455-475 6-26 (178)
67 d1a1va1 c.37.1.14 (A:190-325) 75.5 1.1 7.9E-05 21.4 3.1 42 590-635 94-136 (136)
68 d1jgsa_ a.4.5.28 (A:) Multiple 75.4 1.5 0.00011 20.4 3.8 55 745-799 38-93 (138)
69 d1s3ja_ a.4.5.28 (A:) Putative 75.3 1.4 0.0001 20.5 3.7 58 745-802 39-97 (143)
70 d2cxxa1 c.37.1.8 (A:2-185) GTP 75.3 0.92 6.7E-05 21.9 2.7 19 457-475 3-21 (184)
71 d1gm5a3 c.37.1.19 (A:286-549) 75.3 1.1 7.7E-05 21.5 3.0 48 432-479 78-130 (264)
72 d2pmka1 c.37.1.12 (A:467-707) 75.1 1.4 0.0001 20.5 3.6 26 449-474 24-49 (241)
73 d1w5sa2 c.37.1.20 (A:7-293) CD 75.0 0.88 6.4E-05 22.1 2.5 25 455-479 47-71 (287)
74 d3ctaa1 a.4.5.28 (A:5-89) Ta10 74.7 2.2 0.00016 19.1 4.8 58 745-802 5-68 (85)
75 d2i1qa2 c.37.1.11 (A:65-322) D 74.7 1 7.6E-05 21.5 2.8 24 457-480 37-60 (258)
76 d1gkub1 c.37.1.16 (B:1-250) He 74.1 1.4 0.00011 20.5 3.4 21 593-614 165-185 (237)
77 d1a3xa2 c.1.12.1 (A:1-87,A:189 74.0 0.55 4E-05 23.6 1.3 124 511-661 88-226 (265)
78 d1udxa2 c.37.1.8 (A:157-336) O 73.9 0.84 6.1E-05 22.2 2.2 22 454-475 1-22 (180)
79 d2etha1 a.4.5.28 (A:1-140) Put 73.5 2 0.00014 19.4 4.0 58 745-802 36-94 (140)
80 d2atxa1 c.37.1.8 (A:9-193) Rho 72.9 1.3 9.1E-05 20.9 2.9 44 456-503 11-63 (185)
81 d1wb9a2 c.37.1.12 (A:567-800) 72.4 2.5 0.00018 18.7 4.6 96 427-532 14-110 (234)
82 d1zj6a1 c.37.1.8 (A:2-178) ADP 72.2 1.3 9.5E-05 20.8 2.8 21 455-475 16-36 (177)
83 d1s2ma1 c.37.1.19 (A:46-251) P 71.5 0.99 7.2E-05 21.7 2.1 21 456-476 40-60 (206)
84 d1qdea_ c.37.1.19 (A:) Initiat 71.0 0.97 7.1E-05 21.7 2.0 25 455-482 48-72 (212)
85 d2a61a1 a.4.5.28 (A:5-143) Tra 70.9 1.9 0.00014 19.5 3.5 57 744-800 33-90 (139)
86 d1mkya2 c.37.1.8 (A:173-358) P 70.9 1.5 0.00011 20.4 2.9 21 456-476 10-30 (186)
87 d1mkya1 c.37.1.8 (A:2-172) Pro 70.7 1.3 9.6E-05 20.8 2.6 19 457-475 3-21 (171)
88 d1puia_ c.37.1.8 (A:) Probable 70.5 0.69 5E-05 22.9 1.1 23 453-475 15-37 (188)
89 d1p4xa2 a.4.5.28 (A:126-250) S 70.2 2.4 0.00017 18.9 3.8 59 745-803 37-98 (125)
90 d1egaa1 c.37.1.8 (A:4-182) GTP 70.2 1.4 0.0001 20.6 2.7 19 457-475 8-26 (179)
91 d2cyya1 a.4.5.32 (A:5-64) Puta 70.0 2.8 0.0002 18.3 4.2 49 740-788 2-50 (60)
92 d1ksha_ c.37.1.8 (A:) ADP-ribo 69.6 0.43 3.1E-05 24.4 -0.1 47 456-502 4-51 (165)
93 d1hsja1 a.4.5.28 (A:373-487) S 69.4 1.5 0.00011 20.2 2.7 57 746-802 37-96 (115)
94 d3broa1 a.4.5.28 (A:3-137) Tra 69.0 2.9 0.00021 18.2 4.1 55 745-799 33-90 (135)
95 d1i1ga1 a.4.5.32 (A:2-61) LprA 68.9 2.9 0.00021 18.2 4.2 48 740-787 2-49 (60)
96 d1sf9a_ b.34.15.1 (A:) Hypothe 68.9 0.86 6.3E-05 22.1 1.3 39 521-559 6-45 (118)
97 d1z05a1 a.4.5.63 (A:10-80) Tra 68.6 2.9 0.00021 18.2 4.0 43 744-786 9-51 (71)
98 d1z91a1 a.4.5.28 (A:8-144) Org 68.4 1.9 0.00014 19.6 3.0 17 328-344 118-134 (137)
99 d1qhla_ c.37.1.12 (A:) Cell di 68.1 0.82 6E-05 22.3 1.1 29 449-478 20-48 (222)
100 d2ak3a1 c.37.1.1 (A:0-124,A:16 68.1 1.1 7.7E-05 21.5 1.6 34 452-494 4-37 (189)
101 d1h1oa1 a.3.1.4 (A:12-93) Cyto 68.0 1.7 0.00012 19.9 2.7 21 696-716 59-79 (82)
102 d1r7ra3 c.37.1.20 (A:471-735) 67.8 2.3 0.00017 18.9 3.4 36 455-497 42-77 (265)
103 d1knqa_ c.37.1.17 (A:) Glucona 67.1 1.8 0.00013 19.8 2.7 24 452-475 3-27 (171)
104 d1sxje2 c.37.1.20 (E:4-255) Re 67.1 1.8 0.00013 19.8 2.7 28 453-480 32-59 (252)
105 d1pzna2 c.37.1.11 (A:96-349) D 67.1 2 0.00014 19.5 2.9 46 589-634 135-190 (254)
106 d1oywa2 c.37.1.19 (A:1-206) Re 66.8 1.5 0.00011 20.3 2.2 16 456-471 42-57 (206)
107 d1jhfa1 a.4.5.2 (A:2-72) LexA 66.6 3.2 0.00024 17.8 4.7 60 741-801 9-70 (71)
108 d1mv5a_ c.37.1.12 (A:) Multidr 66.4 2.9 0.00021 18.2 3.6 67 593-677 160-227 (242)
109 d1b0ua_ c.37.1.12 (A:) ATP-bin 66.3 2.8 0.00021 18.3 3.5 160 449-655 23-222 (258)
110 d2j0sa1 c.37.1.19 (A:22-243) P 66.1 1.2 8.8E-05 21.1 1.6 26 456-481 56-81 (222)
111 d1a7ja_ c.37.1.6 (A:) Phosphor 65.9 1 7.5E-05 21.5 1.3 24 453-476 3-26 (288)
112 d1ixza_ c.37.1.20 (A:) AAA dom 65.7 2.4 0.00017 18.8 3.1 35 455-496 43-77 (247)
113 d1twfk_ d.74.3.2 (K:) RPB11 {B 65.4 3.4 0.00025 17.7 4.2 56 471-539 42-103 (114)
114 d1rz3a_ c.37.1.6 (A:) Hypothet 65.2 1.6 0.00012 20.1 2.1 23 458-481 26-48 (198)
115 d1e0ta2 c.1.12.1 (A:1-69,A:168 65.2 1 7.6E-05 21.5 1.2 111 518-652 75-195 (246)
116 d1jj7a_ c.37.1.12 (A:) Peptide 64.8 3.2 0.00024 17.8 3.6 156 447-636 33-213 (251)
117 d1x1ra1 c.37.1.8 (A:10-178) Ra 64.7 2.8 0.0002 18.3 3.3 48 456-503 6-58 (169)
118 d1lw7a2 c.37.1.1 (A:220-411) T 64.5 1.9 0.00014 19.5 2.4 20 457-476 10-29 (192)
119 d1u0la2 c.37.1.8 (A:69-293) Pr 64.5 1.4 0.0001 20.6 1.7 46 458-503 99-164 (225)
120 d1khta_ c.37.1.1 (A:) Adenylat 64.2 1.9 0.00014 19.5 2.4 22 457-478 4-25 (190)
121 d3d31a2 c.37.1.12 (A:1-229) Su 64.1 1.8 0.00013 19.8 2.2 55 590-655 146-201 (229)
122 d1zaka1 c.37.1.1 (A:3-127,A:15 63.9 1.4 0.0001 20.6 1.6 21 453-473 2-22 (189)
123 d1g8pa_ c.37.1.20 (A:) ATPase 63.4 1.6 0.00011 20.2 1.8 46 739-789 252-297 (333)
124 d3b60a1 c.37.1.12 (A:329-581) 63.3 2.3 0.00017 18.9 2.7 43 447-494 34-76 (253)
125 d1byia_ c.37.1.10 (A:) Dethiob 63.3 3 0.00021 18.1 3.2 35 456-494 3-38 (224)
126 d2bdta1 c.37.1.25 (A:1-176) Hy 62.7 2.4 0.00017 18.8 2.6 19 457-475 5-23 (176)
127 d1pbya1 a.3.1.7 (A:1-85) Quino 62.7 1.9 0.00014 19.6 2.1 25 689-713 43-67 (85)
128 d1yrba1 c.37.1.10 (A:1-244) AT 62.6 3 0.00022 18.1 3.1 39 457-498 3-41 (244)
129 d1okra_ a.4.5.39 (A:) Methicil 62.5 3.5 0.00026 17.6 3.5 44 745-788 11-58 (120)
130 d1l2ta_ c.37.1.12 (A:) MJ0796 62.3 3.8 0.00028 17.3 3.6 43 448-495 25-67 (230)
131 d1g2912 c.37.1.12 (1:1-240) Ma 62.2 2.8 0.0002 18.3 2.9 54 593-656 160-214 (240)
132 d1w7ja2 c.37.1.9 (A:63-792) My 61.6 4 0.00029 17.2 3.6 19 613-631 581-599 (730)
133 d1upta_ c.37.1.8 (A:) ADP-ribo 61.6 2.7 0.0002 18.4 2.8 21 456-476 7-27 (169)
134 d2g9na1 c.37.1.19 (A:21-238) I 61.2 2.1 0.00015 19.2 2.1 24 456-482 51-74 (218)
135 d2cg4a1 a.4.5.32 (A:4-66) Regu 61.0 4.1 0.0003 17.1 4.0 50 739-788 3-52 (63)
136 d1wrba1 c.37.1.19 (A:164-401) 60.7 4.1 0.0003 17.1 3.9 29 456-484 60-88 (238)
137 d1oxxk2 c.37.1.12 (K:1-242) Gl 60.7 3.1 0.00023 17.9 2.9 157 446-656 23-215 (242)
138 d1t6na_ c.37.1.19 (A:) Spliceo 60.6 2.2 0.00016 19.0 2.2 24 456-482 40-63 (207)
139 d1xzpa2 c.37.1.8 (A:212-371) T 60.5 1.4 9.8E-05 20.7 1.0 22 456-477 2-23 (160)
140 d1bjna_ c.67.1.4 (A:) Phosphos 60.2 3.1 0.00023 17.9 2.9 22 690-711 332-354 (360)
141 d2hr3a1 a.4.5.28 (A:2-146) Pro 60.1 3.1 0.00023 18.0 2.8 57 745-801 38-96 (145)
142 d1t9ha2 c.37.1.8 (A:68-298) Pr 59.9 1.1 8.3E-05 21.2 0.6 45 459-503 102-165 (231)
143 d1vhta_ c.37.1.1 (A:) Dephosph 59.9 2.9 0.00021 18.2 2.7 21 453-473 1-22 (208)
144 d1uaaa1 c.37.1.19 (A:2-307) DE 59.7 4.3 0.00031 16.9 4.7 33 456-488 16-50 (306)
145 d1mkma1 a.4.5.33 (A:1-75) Tran 59.6 4.3 0.00031 16.9 4.1 44 745-788 9-53 (75)
146 d1rkba_ c.37.1.1 (A:) Adenylat 59.4 1.7 0.00013 19.8 1.5 21 454-474 4-24 (173)
147 d1jjva_ c.37.1.1 (A:) Dephosph 58.9 3.1 0.00022 18.0 2.6 19 454-472 1-20 (205)
148 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 58.8 3.3 0.00024 17.8 2.8 23 454-476 2-24 (184)
149 d1l7vc_ c.37.1.12 (C:) ABC tra 58.8 3.8 0.00027 17.4 3.1 44 446-495 17-60 (231)
150 d1nksa_ c.37.1.1 (A:) Adenylat 58.2 3.3 0.00024 17.8 2.7 22 454-475 1-22 (194)
151 d1szpa2 c.37.1.11 (A:145-395) 58.2 1.8 0.00013 19.8 1.3 24 457-480 37-60 (251)
152 d2hyda1 c.37.1.12 (A:324-578) 57.8 1.5 0.00011 20.4 0.9 55 449-505 39-112 (255)
153 d1yj5a2 c.37.1.1 (A:351-522) 5 57.5 3 0.00022 18.0 2.4 22 453-474 12-34 (172)
154 d1p4xa1 a.4.5.28 (A:1-125) Sta 57.5 4.2 0.0003 17.0 3.1 58 746-803 39-99 (125)
155 d2qtvb1 c.37.1.8 (B:24-189) SA 57.5 3.3 0.00024 17.8 2.6 20 457-476 3-22 (166)
156 d1vrba1 b.82.2.11 (A:8-326) Pu 57.4 2 0.00015 19.4 1.5 39 672-710 200-246 (319)
157 d2fxaa1 a.4.5.28 (A:6-167) Pro 57.2 2.8 0.0002 18.3 2.2 30 756-785 56-85 (162)
158 d2d1ha1 a.4.5.50 (A:1-109) Hyp 57.0 4.7 0.00034 16.6 4.6 44 745-788 25-69 (109)
159 d1sgwa_ c.37.1.12 (A:) Putativ 56.8 3.2 0.00023 17.9 2.4 41 449-494 22-62 (200)
160 d1l8qa2 c.37.1.20 (A:77-289) C 56.6 4.8 0.00035 16.6 9.9 103 457-637 39-142 (213)
161 d2erya1 c.37.1.8 (A:10-180) r- 56.6 3.8 0.00027 17.4 2.8 24 454-477 2-28 (171)
162 d1ls1a2 c.37.1.10 (A:89-295) G 56.5 4.8 0.00035 16.6 6.4 71 457-529 13-87 (207)
163 d1ny5a2 c.37.1.20 (A:138-384) 56.2 3.3 0.00024 17.8 2.4 37 456-496 25-61 (247)
164 d1q7sa_ c.131.1.1 (A:) Bit1 (C 55.7 4.9 0.00036 16.5 4.2 47 328-379 60-112 (117)
165 g1ii8.1 c.37.1.12 (A:,B:) Rad5 55.3 4.6 0.00033 16.7 3.0 10 627-636 336-345 (369)
166 d1lnza2 c.37.1.8 (A:158-342) O 55.2 2.6 0.00019 18.6 1.7 21 454-474 1-21 (185)
167 d1gsia_ c.37.1.1 (A:) Thymidyl 55.2 3.2 0.00023 17.9 2.2 19 459-477 5-23 (208)
168 d1z6ra1 a.4.5.63 (A:12-81) Mlc 55.1 5 0.00037 16.4 3.5 43 744-786 8-50 (70)
169 d1teva_ c.37.1.1 (A:) UMP/CMP 54.9 2.4 0.00017 18.8 1.5 17 455-471 2-18 (194)
170 d1knxa2 c.91.1.2 (A:133-309) H 54.8 4.1 0.0003 17.0 2.8 20 456-475 17-36 (177)
171 d1jmxa1 a.3.1.7 (A:2-85) Quino 54.7 2.7 0.00019 18.5 1.7 25 689-713 43-67 (84)
172 d1cnoa_ a.3.1.1 (A:) Cytochrom 54.7 4.1 0.0003 17.1 2.7 21 695-715 65-85 (86)
173 d1v43a3 c.37.1.12 (A:7-245) Hy 54.5 4.6 0.00034 16.7 2.9 45 447-496 25-69 (239)
174 d1g6ha_ c.37.1.12 (A:) MJ1267 54.2 3.1 0.00023 17.9 2.0 27 450-476 26-52 (254)
175 d1uf9a_ c.37.1.1 (A:) Dephosph 54.1 4.3 0.00031 16.9 2.7 16 459-474 8-23 (191)
176 d1lnwa_ a.4.5.28 (A:) MexR rep 54.1 5.2 0.00038 16.3 3.9 54 745-798 40-94 (141)
177 d3dhwc1 c.37.1.12 (C:1-240) Me 54.1 5.2 0.00038 16.3 3.7 163 447-655 24-214 (240)
178 d1v8ka_ c.37.1.9 (A:) Kinesin 54.0 2.5 0.00018 18.7 1.5 50 615-674 222-272 (362)
179 d1d2na_ c.37.1.20 (A:) Hexamer 54.0 4 0.00029 17.1 2.6 22 456-477 42-63 (246)
180 d1fcdc1 a.3.1.4 (C:1-80) Flavo 53.9 4.4 0.00032 16.8 2.8 18 696-713 60-77 (80)
181 d1z06a1 c.37.1.8 (A:32-196) Ra 53.9 4.4 0.00032 16.9 2.8 22 455-476 3-24 (165)
182 d1ry6a_ c.37.1.9 (A:) Kinesin 53.9 2.4 0.00017 18.8 1.4 15 457-471 88-102 (330)
183 d1veca_ c.37.1.19 (A:) DEAD bo 53.5 3.1 0.00022 18.0 1.9 25 456-483 42-66 (206)
184 d3raba_ c.37.1.8 (A:) Rab3a {R 53.3 4.2 0.00031 17.0 2.6 48 456-503 7-60 (169)
185 d2bmea1 c.37.1.8 (A:6-179) Rab 52.9 4.5 0.00033 16.7 2.7 44 457-503 8-60 (174)
186 d1cora_ a.3.1.1 (A:) Cytochrom 52.9 3.8 0.00028 17.3 2.3 16 697-712 66-81 (82)
187 d2fn4a1 c.37.1.8 (A:24-196) r- 52.8 4.9 0.00036 16.5 2.9 44 456-503 8-60 (173)
188 d1x88a1 c.37.1.9 (A:18-362) Ki 52.4 2.7 0.0002 18.4 1.5 53 664-721 245-298 (345)
189 d2f9la1 c.37.1.8 (A:8-182) Rab 52.4 4.7 0.00034 16.6 2.7 21 456-476 6-26 (175)
190 d2fh5b1 c.37.1.8 (B:63-269) Si 52.3 4.5 0.00033 16.8 2.6 20 457-476 3-22 (207)
191 d1v5wa_ c.37.1.11 (A:) Meiotic 52.2 4.7 0.00034 16.6 2.7 47 589-635 133-189 (258)
192 d2ncda_ c.37.1.9 (A:) Kinesin 52.0 2.7 0.00019 18.5 1.4 47 664-721 275-324 (368)
193 d1bg2a_ c.37.1.9 (A:) Kinesin 51.9 2.7 0.00019 18.5 1.4 52 664-722 226-280 (323)
194 d1c52a_ a.3.1.1 (A:) Cytochrom 51.8 5.6 0.00041 16.1 3.5 17 696-712 74-90 (131)
195 d1sdma_ c.37.1.9 (A:) Kinesin 51.6 2.7 0.0002 18.4 1.4 52 664-723 225-280 (364)
196 d1tuba1 c.32.1.1 (A:1-245) Tub 51.2 5.2 0.00038 16.3 2.8 83 458-555 140-234 (245)
197 d2mysa2 c.37.1.9 (A:4-33,A:80- 51.1 5.7 0.00042 16.0 3.7 26 607-632 601-626 (794)
198 d2erxa1 c.37.1.8 (A:6-176) di- 51.1 5.2 0.00038 16.3 2.8 43 456-502 4-55 (171)
199 d1ctqa_ c.37.1.8 (A:) cH-p21 R 50.9 5.6 0.00041 16.1 2.9 23 454-476 1-25 (166)
200 d1u5ta2 a.4.5.54 (A:165-232) V 50.8 3.9 0.00029 17.2 2.1 44 745-788 7-50 (68)
201 d1y63a_ c.37.1.1 (A:) Probable 50.6 4.9 0.00036 16.5 2.6 46 455-506 6-51 (174)
202 d3adka_ c.37.1.1 (A:) Adenylat 50.5 2.9 0.00021 18.2 1.4 23 450-472 4-26 (194)
203 d1yzqa1 c.37.1.8 (A:14-177) Ra 50.4 5.2 0.00038 16.3 2.7 20 457-476 3-22 (164)
204 d1sd4a_ a.4.5.39 (A:) Penicill 50.3 5.9 0.00043 15.9 4.3 44 745-788 10-57 (122)
205 d1zd9a1 c.37.1.8 (A:18-181) AD 50.3 5.9 0.00043 15.9 2.9 22 456-477 4-25 (164)
206 d1nija1 c.37.1.10 (A:2-223) Hy 50.0 5.1 0.00037 16.3 2.6 24 453-476 2-25 (222)
207 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 49.9 5.2 0.00038 16.3 2.6 25 452-476 11-35 (186)
208 d2awna2 c.37.1.12 (A:4-235) Ma 49.8 6 0.00044 15.8 3.6 31 447-478 19-49 (232)
209 d2cfxa1 a.4.5.32 (A:1-63) Tran 49.8 6 0.00044 15.8 4.5 49 739-787 3-51 (63)
210 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 49.8 5.4 0.00039 16.2 2.7 43 457-503 5-56 (177)
211 d1ky3a_ c.37.1.8 (A:) Rab-rela 49.7 5.6 0.00041 16.0 2.8 22 455-476 3-24 (175)
212 d2zfia1 c.37.1.9 (A:4-352) Kin 49.7 3 0.00022 18.1 1.4 16 456-471 89-104 (349)
213 d2f7sa1 c.37.1.8 (A:5-190) Rab 49.6 5.1 0.00037 16.3 2.5 20 456-475 7-26 (186)
214 d1e32a2 c.37.1.20 (A:201-458) 49.4 5.3 0.00039 16.2 2.6 36 456-498 40-75 (258)
215 d1tvca2 c.25.1.2 (A:111-251) M 49.4 6.1 0.00044 15.8 3.5 40 452-494 7-46 (141)
216 d3erja1 c.131.1.1 (A:2-117) Hy 49.2 5.9 0.00043 15.9 2.8 12 615-626 61-72 (116)
217 d1r7ja_ a.4.5.49 (A:) Sso10a ( 49.1 6.1 0.00045 15.8 4.2 43 743-787 8-50 (90)
218 d1c6sa_ a.3.1.1 (A:) Cytochrom 49.1 3.9 0.00029 17.2 1.9 21 695-715 63-83 (87)
219 d1e2ka_ c.37.1.1 (A:) Thymidin 49.0 5 0.00037 16.4 2.4 21 454-474 1-24 (329)
220 d1wmsa_ c.37.1.8 (A:) Rab9a {H 49.0 5.9 0.00043 15.9 2.8 24 453-476 3-28 (174)
221 d1lj9a_ a.4.5.28 (A:) Transcri 48.9 6.2 0.00045 15.7 4.4 57 745-801 33-90 (144)
222 d1h0ca_ c.67.1.3 (A:) Alanine- 48.8 6.2 0.00045 15.7 6.8 24 688-711 354-379 (388)
223 d1r8sa_ c.37.1.8 (A:) ADP-ribo 48.8 5.9 0.00043 15.9 2.8 21 456-476 2-22 (160)
224 d1c75a_ a.3.1.1 (A:) Cytochrom 48.7 5.1 0.00037 16.4 2.4 17 696-712 54-70 (71)
225 d1ctja_ a.3.1.1 (A:) Cytochrom 48.6 3.3 0.00024 17.8 1.4 20 695-714 66-85 (89)
226 d1ls9a_ a.3.1.1 (A:) Cytochrom 48.5 4.1 0.0003 17.1 1.9 20 694-713 67-86 (91)
227 d2atva1 c.37.1.8 (A:5-172) Ras 48.5 5.6 0.00041 16.1 2.6 47 457-503 5-56 (168)
228 d1lkxa_ c.37.1.9 (A:) Myosin S 48.4 6.3 0.00046 15.7 3.5 35 744-782 645-683 (684)
229 d1ynra1 a.3.1.1 (A:1-80) Cytoc 48.2 5.2 0.00038 16.3 2.4 16 697-712 64-79 (80)
230 d1xjca_ c.37.1.10 (A:) Molybdo 48.1 6.4 0.00046 15.6 3.3 26 454-479 1-26 (165)
231 d1s3ga1 c.37.1.1 (A:1-125,A:16 47.8 3.6 0.00026 17.5 1.5 16 456-471 2-17 (182)
232 d1fcdc2 a.3.1.4 (C:81-174) Fla 47.7 5.6 0.0004 16.1 2.5 19 695-713 76-94 (94)
233 d351ca_ a.3.1.1 (A:) Cytochrom 47.6 5.3 0.00039 16.2 2.4 16 697-712 66-81 (82)
234 d1moza_ c.37.1.8 (A:) ADP-ribo 47.5 4.6 0.00033 16.7 2.0 19 456-474 19-37 (182)
235 d1h2ka_ b.82.2.6 (A:) Hypoxia- 47.4 3.6 0.00026 17.5 1.5 22 670-691 246-268 (335)
236 d1ji0a_ c.37.1.12 (A:) Branche 47.1 4.7 0.00034 16.6 2.0 149 449-636 27-200 (240)
237 d1u0ja_ c.37.1.20 (A:) Rep 40 47.1 6 0.00044 15.8 2.6 21 456-476 106-126 (267)
238 d1hv8a1 c.37.1.19 (A:3-210) Pu 46.5 5.8 0.00043 15.9 2.4 22 456-477 44-65 (208)
239 d1x38a1 c.1.8.7 (A:1-388) Beta 46.5 5.7 0.00041 16.0 2.4 36 744-786 325-360 (388)
240 d1nrwa_ c.108.1.10 (A:) Hypoth 46.5 6.7 0.00049 15.5 6.1 77 610-714 23-99 (285)
241 d1kv9a1 a.3.1.6 (A:561-664) Qu 46.3 2.3 0.00016 19.0 0.3 22 696-717 79-100 (104)
242 d1fzqa_ c.37.1.8 (A:) ADP-ribo 46.1 6.2 0.00045 15.7 2.5 21 456-476 18-38 (176)
243 d1cyja_ a.3.1.1 (A:) Cytochrom 46.1 5.2 0.00038 16.3 2.1 18 696-713 66-83 (90)
244 d2fbha1 a.4.5.28 (A:8-144) Tra 45.9 6.8 0.0005 15.4 3.6 44 745-788 32-76 (137)
245 d1ukza_ c.37.1.1 (A:) Uridylat 45.8 4.3 0.00031 17.0 1.6 34 452-494 6-39 (196)
246 d1puja_ c.37.1.8 (A:) Probable 45.7 6.8 0.0005 15.4 2.7 20 456-475 114-133 (273)
247 d1z0fa1 c.37.1.8 (A:8-173) Rab 45.5 6.6 0.00048 15.5 2.6 21 456-476 6-26 (166)
248 d1qvra3 c.37.1.20 (A:536-850) 45.2 6 0.00044 15.8 2.3 31 588-622 123-153 (315)
249 d1g16a_ c.37.1.8 (A:) Rab-rela 45.2 7 0.00051 15.3 2.8 48 456-503 4-57 (166)
250 d1kaoa_ c.37.1.8 (A:) Rap2a {H 44.9 6.9 0.0005 15.4 2.6 44 457-504 6-58 (167)
251 d1i2ma_ c.37.1.8 (A:) Ran {Hum 44.9 4.2 0.0003 17.0 1.5 47 457-503 6-58 (170)
252 d1qksa1 a.3.1.2 (A:9-135) N-te 44.9 7.1 0.00051 15.3 2.7 19 695-713 105-123 (127)
253 d1zp6a1 c.37.1.25 (A:6-181) Hy 44.6 6.7 0.00049 15.5 2.5 35 457-498 7-41 (176)
254 d1f5na2 c.37.1.8 (A:7-283) Int 44.4 5.8 0.00042 15.9 2.2 19 457-475 35-53 (277)
255 d1f1fa_ a.3.1.1 (A:) Cytochrom 44.3 5.9 0.00043 15.9 2.2 18 697-714 68-85 (88)
256 d1xppa_ d.74.3.2 (A:) DNA-dire 44.3 7.2 0.00052 15.2 4.1 64 473-556 28-96 (99)
257 d1z2aa1 c.37.1.8 (A:8-171) Rab 44.1 7.2 0.00052 15.2 2.6 19 457-475 5-23 (164)
258 d2vp4a1 c.37.1.1 (A:12-208) De 44.0 3.5 0.00026 17.6 1.0 18 457-474 12-29 (197)
259 d1r2qa_ c.37.1.8 (A:) Rab5a {H 43.8 7.3 0.00053 15.2 2.6 22 456-477 8-29 (170)
260 d1br2a2 c.37.1.9 (A:80-789) My 43.7 7.3 0.00053 15.2 3.2 14 596-609 527-540 (710)
261 d2b30a1 c.108.1.10 (A:18-300) 43.5 7.4 0.00054 15.2 3.0 85 611-715 31-116 (283)
262 d1cc5a_ a.3.1.1 (A:) Cytochrom 43.5 6.3 0.00046 15.7 2.2 16 696-711 67-82 (83)
263 d1f1ca_ a.3.1.1 (A:) Photosyst 43.2 6.2 0.00045 15.7 2.2 18 696-713 104-121 (129)
264 d1im5a_ c.33.1.3 (A:) Pyrazina 43.2 7.5 0.00054 15.1 3.3 108 593-715 5-120 (179)
265 d1e29a_ a.3.1.1 (A:) Photosyst 43.1 6.3 0.00046 15.7 2.2 18 696-713 106-123 (135)
266 d1nira1 a.3.1.2 (A:6-117) N-te 42.9 6.1 0.00044 15.8 2.1 17 697-713 92-108 (112)
267 d1m70a1 a.3.1.4 (A:1-92) Cytoc 42.7 7.4 0.00054 15.2 2.5 21 694-714 70-90 (92)
268 d1r6bx3 c.37.1.20 (X:437-751) 42.6 7.6 0.00055 15.1 4.0 32 587-622 118-149 (315)
269 d2ev0a1 a.4.5.24 (A:2-62) Mang 42.4 7.7 0.00056 15.0 3.7 46 741-786 7-52 (61)
270 d1y7ta1 c.2.1.5 (A:0-153) Mala 42.1 6.2 0.00045 15.7 2.0 57 592-651 83-150 (154)
271 d1mh1a_ c.37.1.8 (A:) Rac {Hum 42.1 7.7 0.00056 15.0 2.6 44 456-503 7-59 (183)
272 d1gvnb_ c.37.1.21 (B:) Plasmid 42.0 7.8 0.00057 15.0 8.8 34 454-494 31-65 (273)
273 d1kx7a_ a.3.1.1 (A:) Mono-heme 42.0 6.3 0.00046 15.7 2.0 17 696-712 64-80 (81)
274 d1c4oa1 c.37.1.19 (A:2-409) Nu 41.6 7.9 0.00057 15.0 3.3 26 518-543 249-274 (408)
275 d1vgya1 c.56.5.4 (A:2-180,A:29 41.0 8 0.00059 14.9 2.7 41 310-354 4-44 (262)
276 d1w23a_ c.67.1.4 (A:) Phosphos 40.7 7.5 0.00055 15.1 2.3 23 690-712 333-356 (360)
277 d1f9va_ c.37.1.9 (A:) Kinesin 40.7 5.1 0.00037 16.4 1.4 15 457-471 86-100 (342)
278 d2onka1 c.37.1.12 (A:1-240) Mo 40.6 6.9 0.0005 15.4 2.1 53 593-655 147-200 (240)
279 d2bmja1 c.37.1.8 (A:66-240) Ce 40.4 8.2 0.0006 14.8 2.9 50 454-503 3-58 (175)
280 d1e4va1 c.37.1.1 (A:1-121,A:15 40.4 5.8 0.00042 15.9 1.6 16 456-471 2-17 (179)
281 d1j2ra_ c.33.1.3 (A:) Hypothet 40.2 8.2 0.0006 14.8 2.7 31 608-638 31-61 (188)
282 d1xtqa1 c.37.1.8 (A:3-169) GTP 40.1 8.3 0.0006 14.8 2.9 51 453-503 3-58 (167)
283 d2btoa1 c.32.1.1 (A:3-246) Tub 40.1 4.5 0.00033 16.8 1.0 81 459-554 141-233 (244)
284 d1wzca1 c.108.1.10 (A:1-243) P 40.0 7.8 0.00057 15.0 2.3 76 620-709 28-106 (243)
285 d1azta2 c.37.1.8 (A:35-65,A:20 40.0 8.3 0.00061 14.8 4.3 23 453-475 5-27 (221)
286 d1u8za_ c.37.1.8 (A:) Ras-rela 39.8 8.3 0.00061 14.8 2.6 44 456-503 6-58 (168)
287 d1goja_ c.37.1.9 (A:) Kinesin 39.7 6.8 0.00049 15.4 1.9 52 664-722 231-286 (354)
288 d2c0ra1 c.67.1.4 (A:2-362) Pho 39.6 6.5 0.00048 15.6 1.8 22 690-711 333-355 (361)
289 d1m7ba_ c.37.1.8 (A:) RhoE (RN 39.6 8.4 0.00061 14.7 2.7 43 457-503 5-56 (179)
290 d1tubb1 c.32.1.1 (B:1-245) Tub 39.4 6.2 0.00045 15.7 1.7 81 459-554 139-231 (243)
291 d1gdva_ a.3.1.1 (A:) Cytochrom 39.3 7.6 0.00055 15.1 2.1 20 695-714 63-82 (85)
292 d2g3ya1 c.37.1.8 (A:73-244) GT 39.3 8.5 0.00062 14.7 2.6 47 457-503 6-59 (172)
293 d2frha1 a.4.5.28 (A:102-216) P 39.1 8.5 0.00062 14.7 3.7 57 746-802 38-97 (115)
294 d2fu5c1 c.37.1.8 (C:3-175) Rab 39.1 5.1 0.00037 16.4 1.2 47 457-503 9-61 (173)
295 d1ckea_ c.37.1.1 (A:) CMP kina 38.8 6.4 0.00047 15.6 1.7 14 331-344 210-223 (225)
296 d1a56a_ a.3.1.1 (A:) Cytochrom 38.3 6.6 0.00048 15.5 1.7 16 697-712 65-80 (81)
297 d1s96a_ c.37.1.1 (A:) Guanylat 38.2 8.8 0.00064 14.6 2.6 20 457-476 5-24 (205)
298 d2bcgy1 c.37.1.8 (Y:3-196) GTP 38.1 8.9 0.00064 14.6 2.9 49 455-503 7-61 (194)
299 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 37.9 5.3 0.00038 16.2 1.1 48 456-503 5-58 (170)
300 d1svma_ c.37.1.20 (A:) Papillo 37.8 8.9 0.00065 14.5 3.4 27 453-479 153-179 (362)
301 d1ku9a_ a.4.5.36 (A:) DNA-bind 37.8 8.9 0.00065 14.5 3.6 29 757-785 43-71 (151)
302 d1mz4a_ a.3.1.1 (A:) Cytochrom 37.7 8.6 0.00062 14.7 2.2 17 697-713 107-123 (131)
303 d1gksa_ a.3.1.1 (A:) Cytochrom 37.6 9 0.00065 14.5 2.4 16 696-711 61-76 (78)
304 d1kkma_ c.91.1.2 (A:) HPr kina 37.5 9 0.00066 14.5 2.6 18 456-473 16-33 (176)
305 d1zina1 c.37.1.1 (A:1-125,A:16 37.5 6.6 0.00048 15.5 1.5 17 456-472 2-18 (182)
306 d2cdna1 c.37.1.1 (A:1-181) Ade 36.8 6.9 0.0005 15.4 1.5 15 456-470 2-16 (181)
307 d1z0ja1 c.37.1.8 (A:2-168) Rab 36.1 9.5 0.00069 14.4 2.6 21 456-476 6-26 (167)
308 d3bzka1 a.60.2.6 (A:474-563) T 36.1 9.5 0.00069 14.3 3.5 33 753-785 29-61 (90)
309 d1elua_ c.67.1.3 (A:) Cystine 36.0 9.5 0.00069 14.3 5.9 25 689-713 355-380 (381)
310 d2fbka1 a.4.5.28 (A:8-179) Tra 35.8 2.8 0.0002 18.3 -0.6 44 756-799 80-124 (172)
311 d1ewqa2 c.37.1.12 (A:542-765) 35.7 9.6 0.0007 14.3 3.5 93 427-532 12-104 (224)
312 d1qf9a_ c.37.1.1 (A:) UMP/CMP 35.6 8 0.00058 14.9 1.7 15 456-470 8-22 (194)
313 d1qhxa_ c.37.1.3 (A:) Chloramp 35.6 9.6 0.0007 14.3 2.4 18 456-473 5-22 (178)
314 d1p6ra_ a.4.5.39 (A:) Penicill 35.1 9.8 0.00071 14.2 4.1 51 744-794 12-66 (82)
315 d1wb1a4 c.37.1.8 (A:1-179) Elo 35.0 9.8 0.00072 14.2 2.3 19 457-475 8-26 (179)
316 d2gjsa1 c.37.1.8 (A:91-258) Ra 34.4 10 0.00073 14.2 2.6 47 457-503 4-54 (168)
317 d1c53a_ a.3.1.1 (A:) Cytochrom 34.3 8.8 0.00064 14.6 1.8 19 693-711 60-78 (79)
318 d2a5ja1 c.37.1.8 (A:9-181) Rab 34.2 10 0.00073 14.1 2.5 20 457-476 6-25 (173)
319 d1x3sa1 c.37.1.8 (A:2-178) Rab 34.1 10 0.00074 14.1 2.8 45 456-503 9-62 (177)
320 d2nlya1 c.6.2.7 (A:31-254) Hyp 33.8 6.5 0.00047 15.6 1.0 174 589-785 1-215 (224)
321 d1akya1 c.37.1.1 (A:3-130,A:16 33.4 8.4 0.00061 14.8 1.5 19 456-474 4-22 (180)
322 d2jn6a1 a.4.1.19 (A:1-89) Unch 33.4 10 0.00076 14.1 2.0 47 741-787 9-55 (89)
323 d1c1ya_ c.37.1.8 (A:) Rap1A {H 33.3 10 0.00076 14.0 2.8 21 456-476 5-25 (167)
324 d1vpla_ c.37.1.12 (A:) Putativ 33.3 10 0.00076 14.0 2.1 48 440-491 10-61 (238)
325 d3deua1 a.4.5.28 (A:2-141) Tra 33.2 10 0.00076 14.0 5.6 56 745-800 35-92 (140)
326 d1kaga_ c.37.1.2 (A:) Shikimat 33.1 7.9 0.00057 15.0 1.4 13 457-469 5-17 (169)
327 d1wvec1 a.3.1.1 (C:602-675) p- 32.8 11 0.00077 14.0 2.5 17 696-712 56-72 (74)
328 d2iyva1 c.37.1.2 (A:2-166) Shi 31.9 8.4 0.00061 14.8 1.3 18 455-472 2-19 (165)
329 d1m8pa3 c.37.1.15 (A:391-573) 31.8 8.6 0.00062 14.7 1.4 17 458-474 10-26 (183)
330 d1kk8a2 c.37.1.9 (A:1-28,A:77- 31.6 11 0.00081 13.8 3.7 22 611-632 602-623 (789)
331 d1kgda_ c.37.1.1 (A:) Guanylat 31.6 11 0.00081 13.8 2.6 28 457-489 6-33 (178)
332 d1ko7a2 c.91.1.2 (A:130-298) H 31.5 11 0.00081 13.8 2.7 24 456-483 17-40 (169)
333 d1z08a1 c.37.1.8 (A:17-183) Ra 31.5 11 0.00081 13.8 2.6 20 457-476 6-25 (167)
334 d1e69a_ c.37.1.12 (A:) Smc hea 31.3 10 0.00074 14.1 1.7 40 593-636 244-283 (308)
335 d2qn6a3 c.37.1.8 (A:2-206) Ini 31.3 5.4 0.00039 16.2 0.3 37 454-490 6-44 (205)
336 d1nffa_ c.2.1.2 (A:) Putative 31.0 11 0.00082 13.8 3.6 104 349-456 131-243 (244)
337 d1gkya_ c.37.1.1 (A:) Guanylat 30.9 11 0.00082 13.8 2.6 29 457-490 4-32 (186)
338 d1yaca_ c.33.1.3 (A:) YcaC {Es 30.8 11 0.00083 13.8 3.1 149 591-776 12-186 (204)
339 d1nf9a_ c.33.1.3 (A:) Phenazin 30.7 11 0.00083 13.7 4.5 51 588-638 29-83 (207)
340 d1nf2a_ c.108.1.10 (A:) Hypoth 30.3 12 0.00085 13.7 7.1 79 609-715 23-101 (267)
341 d2edua1 a.60.2.7 (A:8-98) KIF2 30.1 9 0.00066 14.5 1.3 35 751-785 25-59 (91)
342 d1xq1a_ c.2.1.2 (A:) Tropinone 30.0 12 0.00085 13.7 4.3 53 349-401 137-190 (259)
343 d1d8wa_ c.1.15.2 (A:) L-rhamno 29.9 12 0.00086 13.6 5.3 94 339-443 24-130 (416)
344 d1lvga_ c.37.1.1 (A:) Guanylat 29.7 12 0.00086 13.6 2.6 19 457-475 3-21 (190)
345 d1viaa_ c.37.1.2 (A:) Shikimat 29.7 9 0.00065 14.5 1.2 12 459-470 5-16 (161)
346 d1fftb2 f.17.2.1 (B:27-117) Cy 29.6 6.4 0.00047 15.6 0.4 39 66-104 6-44 (91)
347 d2isya1 a.4.5.24 (A:2-64) Iron 29.3 12 0.00087 13.6 3.9 44 743-786 10-54 (63)
348 d1xvia_ c.108.1.10 (A:) Putati 29.1 12 0.00088 13.5 2.4 24 616-639 28-51 (232)
349 d2ngra_ c.37.1.8 (A:) CDC42 {H 29.0 12 0.00088 13.5 2.7 43 457-503 6-57 (191)
350 d2ew1a1 c.37.1.8 (A:4-174) Rab 29.0 12 0.00089 13.5 2.7 21 456-476 7-27 (171)
351 d1e6ca_ c.37.1.2 (A:) Shikimat 29.0 10 0.00073 14.2 1.3 14 457-470 5-18 (170)
352 d1pvda2 c.36.1.5 (A:2-181) Pyr 28.9 12 0.00089 13.5 1.8 26 380-405 5-31 (180)
353 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 28.9 12 0.00089 13.5 2.5 18 457-474 5-22 (200)
354 d1wr8a_ c.108.1.10 (A:) Phosph 28.8 12 0.00089 13.5 2.4 15 621-635 31-45 (230)
355 d1vjoa_ c.67.1.3 (A:) Alanine- 28.8 12 0.00089 13.5 4.4 24 688-711 349-374 (377)
356 d1kb0a1 a.3.1.6 (A:579-675) Qu 28.7 6 0.00044 15.8 0.1 19 696-714 75-93 (97)
357 d1svsa1 c.37.1.8 (A:32-60,A:18 28.6 12 0.0009 13.5 3.1 19 456-474 4-22 (195)
358 d2p4wa1 a.4.5.64 (A:1-194) Tra 28.5 12 0.0009 13.5 4.5 23 596-618 31-53 (194)
359 d1e0sa_ c.37.1.8 (A:) ADP-ribo 28.4 12 0.00089 13.5 1.7 19 456-474 14-32 (173)
360 d1foba_ c.1.8.3 (A:) Beta-1,4- 27.8 13 0.00093 13.4 2.8 27 329-355 107-133 (334)
361 d2q46a1 c.2.1.2 (A:2-253) Hypo 27.8 11 0.00077 14.0 1.3 13 452-464 1-13 (252)
362 d1ak2a1 c.37.1.1 (A:14-146,A:1 27.6 11 0.00082 13.8 1.4 15 457-471 6-20 (190)
363 d1d0xa2 c.37.1.9 (A:2-33,A:80- 27.5 13 0.00094 13.4 3.6 34 744-782 673-710 (712)
364 d1rlka_ c.131.1.1 (A:) Hypothe 27.3 13 0.00094 13.3 3.9 39 339-378 66-110 (116)
365 d1jtva_ c.2.1.2 (A:) Human est 27.2 13 0.00095 13.3 3.9 24 377-400 162-186 (285)
366 d2v7fa1 a.4.5.84 (A:2-150) Rib 26.9 13 0.00096 13.3 2.2 87 699-790 9-115 (149)
367 d1u8xx1 c.2.1.5 (X:3-169) Malt 26.8 6.8 0.0005 15.4 0.2 40 469-509 14-56 (167)
368 d2g6ba1 c.37.1.8 (A:58-227) Ra 26.5 13 0.00097 13.2 2.8 47 457-503 9-62 (170)
369 d2duya1 a.60.2.7 (A:11-75) Unc 26.4 13 0.00092 13.4 1.5 25 754-778 12-36 (65)
370 d1xp8a1 c.37.1.11 (A:15-282) R 25.8 14 0.001 13.1 4.6 51 432-494 43-93 (268)
371 d1x1ta1 c.2.1.2 (A:1-260) D(-) 25.8 13 0.00092 13.4 1.4 47 349-400 134-186 (260)
372 d2g9wa1 a.4.5.39 (A:3-124) Hyp 25.7 14 0.001 13.1 4.2 14 327-340 105-118 (122)
373 d1o5ia_ c.2.1.2 (A:) beta-keto 25.7 5.3 0.00038 16.2 -0.6 50 349-400 117-169 (234)
374 d1u94a1 c.37.1.11 (A:6-268) Re 25.7 14 0.001 13.1 6.6 71 590-660 132-226 (263)
375 d2fexa1 c.23.16.2 (A:1-188) Hy 25.1 14 0.001 13.0 2.1 92 592-715 5-96 (188)
376 d1tr9a_ c.1.8.7 (A:) Beta-hexo 25.0 14 0.001 13.0 2.2 70 328-403 91-168 (330)
377 d1vema2 c.1.8.1 (A:1-417) Bact 24.9 14 0.001 13.0 2.4 61 306-384 13-78 (417)
378 d1lfma_ a.3.1.1 (A:) Mitochond 24.5 14 0.0011 13.0 2.3 18 696-713 85-102 (103)
379 d1n57a_ c.23.16.2 (A:) HSP31 ( 24.4 15 0.0011 13.0 2.0 37 677-716 141-177 (279)
380 d1x6va3 c.37.1.4 (A:34-228) Ad 24.4 10 0.00073 14.2 0.6 17 458-474 23-39 (195)
381 d2gtaa1 a.204.1.2 (A:1-98) Hyp 24.3 11 0.00084 13.7 0.9 11 595-605 63-73 (98)
382 d1z3ix2 c.37.1.19 (X:92-389) R 24.1 15 0.0011 12.9 3.1 42 456-497 81-125 (298)
383 d1rkqa_ c.108.1.10 (A:) Hypoth 24.0 15 0.0011 12.9 3.0 76 619-714 31-106 (271)
384 d2cuja1 a.4.1.18 (A:8-108) Tra 23.9 15 0.0011 12.9 2.7 36 753-788 66-101 (101)
385 d1hjsa_ c.1.8.3 (A:) Beta-1,4- 23.7 15 0.0011 12.9 2.8 24 330-353 107-130 (332)
386 d1znwa1 c.37.1.1 (A:20-201) Gu 23.5 15 0.0011 12.8 2.6 18 457-474 5-22 (182)
387 d2gnoa2 c.37.1.20 (A:11-208) g 23.5 15 0.0011 12.8 3.6 27 452-478 13-39 (198)
388 d1g7sa4 c.37.1.8 (A:1-227) Ini 23.3 15 0.0011 12.8 2.8 39 585-631 90-128 (227)
389 d2g50a2 c.1.12.1 (A:12-115,A:2 23.3 15 0.0011 12.8 4.0 50 608-662 190-244 (282)
390 d1c9ka_ c.37.1.11 (A:) Adenosy 23.2 15 0.0011 12.9 1.3 17 457-473 2-18 (180)
391 d1hw1a1 a.4.5.6 (A:5-78) Fatty 23.0 15 0.0011 12.8 1.5 36 757-792 29-64 (74)
392 d2hs5a1 a.4.5.6 (A:25-93) Puta 22.5 16 0.0011 12.7 2.1 36 757-792 27-62 (69)
393 d1deka_ c.37.1.1 (A:) Deoxynuc 22.5 16 0.0011 12.7 2.6 12 459-470 6-17 (241)
394 d2hoea1 a.4.5.63 (A:10-71) N-a 22.5 16 0.0011 12.7 3.4 40 747-787 5-44 (62)
395 d2c78a3 c.37.1.8 (A:9-212) Elo 22.2 16 0.0012 12.7 2.8 21 455-475 2-24 (204)
396 d1vkya_ e.53.1.1 (A:) Queuosin 21.8 15 0.0011 12.9 1.1 29 685-713 291-319 (332)
397 d1mo6a1 c.37.1.11 (A:1-269) Re 21.3 17 0.0012 12.5 2.5 51 432-494 46-96 (269)
398 d1rk8c_ b.72.3.1 (C:) Pym (Wit 21.3 10 0.00073 14.2 0.1 10 627-636 9-18 (33)
399 d1ulya_ a.4.5.58 (A:) Hypothet 21.2 17 0.0012 12.5 4.3 13 512-525 6-18 (190)
400 d1rlma_ c.108.1.10 (A:) Sugar 21.0 17 0.0012 12.5 3.2 15 622-636 33-47 (269)
401 d1fmca_ c.2.1.2 (A:) 7-alpha-h 21.0 8.4 0.00061 14.7 -0.3 24 377-400 166-190 (255)
402 d1v72a1 c.67.1.1 (A:6-350) Phe 20.5 17 0.0012 12.4 4.1 26 687-712 318-344 (345)
403 d2ch1a1 c.67.1.3 (A:2-389) 3-h 20.3 17 0.0013 12.4 3.8 32 687-718 351-387 (388)
404 d2ji7a1 c.31.1.3 (A:195-369) O 20.2 8.4 0.00061 14.8 -0.4 137 328-530 5-146 (175)
405 d1svva_ c.67.1.1 (A:) Low-spec 20.0 18 0.0013 12.3 4.9 26 686-711 313-339 (340)
No 1
>d2j5pa1 a.4.5.67 (A:1261-1329) DNA translocase FtsK {Escherichia coli [TaxId: 562]}
Probab=99.90 E-value=3.9e-25 Score=204.46 Aligned_cols=69 Identities=43% Similarity=0.650 Sum_probs=65.2
Q ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCCEEEECHHHH
Q ss_conf 887777038999999996598500014222001177899999999977986802278872673171253
Q gi|254780799|r 735 NSSVADDLYKQAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGPASSTGKREILISSMEE 803 (806)
Q Consensus 735 ~~~~~d~l~~~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~~g~~~r~vl~~~~~~ 803 (806)
++++.||||++|+++|++++++|||+|||||||||||||||||+||++|||||++|+||||||++++.|
T Consensus 1 G~~~~D~ly~~a~~~V~~~~kaS~S~lQR~l~IGYnRAariid~LE~~GiVsp~~~~~~ReVL~~~~~~ 69 (69)
T d2j5pa1 1 GAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD 69 (69)
T ss_dssp CTTTSCTTHHHHHHHHHHTTEEEHHHHHHHHTCCHHHHHHHHHHHHHHTSBCCCCSSSEEEBCSCCSCC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCC
T ss_conf 986422899999999998086448999999712522999999999988768877799799672899887
No 2
>d2ve8a1 a.4.5.67 (A:745-811) DNA translocase FtsK {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.89 E-value=1.5e-24 Score=200.02 Aligned_cols=67 Identities=45% Similarity=0.677 Sum_probs=64.0
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCCEEEECHHHHH
Q ss_conf 7770389999999965985000142220011778999999999779868022788726731712530
Q gi|254780799|r 738 VADDLYKQAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGPASSTGKREILISSMEEC 804 (806)
Q Consensus 738 ~~d~l~~~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~~g~~~r~vl~~~~~~~ 804 (806)
|.||||++|+++|+++|++|||+|||||||||||||||||+||++|||||++|+||||||+++..++
T Consensus 1 e~D~ly~~a~~~V~~~~kaS~S~lQR~l~IGYnRAariid~LE~~GiVsp~~g~~~ReVL~~~~~~d 67 (67)
T d2ve8a1 1 EDDPLYDEAVRFVTESRRASISAVQRKLKIGYNRAARMIEAMEMAGVVTPMNTNGSREVIAPAPVRD 67 (67)
T ss_dssp CCCTTHHHHHHHHHHHCCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSBCCCCTTSCCCBCSCCCCCC
T ss_pred CCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCC
T ss_conf 9607999999999980863489999997115079999999999875988877998886748999988
No 3
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=98.87 E-value=4.5e-09 Score=84.15 Aligned_cols=64 Identities=23% Similarity=0.317 Sum_probs=47.1
Q ss_pred CCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCC--C----CCCHHHHHCCCCEEEEEECC
Q ss_conf 9868776344688887321005889999998664142379999657775--3----55435541102515876458
Q gi|254780799|r 589 MPYIVVVIDEMADLMMVARKDIESAVQRLAQMARASGIHVIMATQRPSV--D----VITGTIKANFPTRISFQVSS 658 (806)
Q Consensus 589 lp~ivviiDElaDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPsv--d----vitg~ikan~p~riaf~v~s 658 (806)
-+-+++++||++.+.- ++ .+.++...+|..|+++++|||.++= + -..-.|-+|+.++|.|+++.
T Consensus 275 ~~~v~l~lDE~~~~~~-----~~-~l~~~l~~~Rk~Gv~~~l~~Qs~~ql~~~yg~~~a~~i~~n~~t~i~~~~~~ 344 (433)
T d1e9ra_ 275 KRRLWLFIDELASLEK-----LA-SLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSR 344 (433)
T ss_dssp TCCEEEEESCGGGSCB-----CS-SHHHHHHHCTTTTEEEEEEESCHHHHHHHHCHHHHHHHHTTCCEEEEEECCT
T ss_pred CCCEEEEECHHHHHCC-----CH-HHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 9854998353755256-----08-7999999847899159999364889999873889999998468589953788
No 4
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=97.62 E-value=0.00011 Score=51.25 Aligned_cols=94 Identities=21% Similarity=0.329 Sum_probs=52.4
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEE-CCCHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 02355304774067999999999998299578478885-23100111027703431223343045668999999999999
Q gi|254780799|r 455 PHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMI-DPKMLELSVYDGIPNLLTPVVTNPQKAVTVLKWLVCEMEER 533 (806)
Q Consensus 455 PHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evklili-DPK~vEls~Y~~iPHLl~pVvTd~~kA~~aL~w~V~EMe~R 533 (806)
-.+||+|.|||||+.++|+++ ..-|++.|.+.| ||--+.|...+.++++...--.++. .+|+.+.+ | |
T Consensus 167 ~nili~G~tgSGKTT~l~al~-----~~i~~~~rivtiEd~~El~l~~~~~~~~~~~~~~~~~~---~ll~~~lR-~--~ 235 (323)
T d1g6oa_ 167 KNVIVCGGTGSGKTTYIKSIM-----EFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSA---DCLKSCLR-M--R 235 (323)
T ss_dssp CCEEEEESTTSSHHHHHHHHG-----GGSCTTCCEEEEESSCCCCCSSCSSEEEEECBTTBCHH---HHHHHHTT-S--C
T ss_pred CCEEEEEECCCCCHHHHHHHH-----HHCCCCCCEEECCCHHHHHCCCCCCCCEECCCCCHHHH---HHHHHHHC-C--C
T ss_conf 888999403566257899986-----53014562331132265511112454100146542499---99999743-4--9
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 9999870899689999999988744786
Q gi|254780799|r 534 YQKMSKIGVRNIDGFNLKVAQYHNTGKK 561 (806)
Q Consensus 534 Y~l~a~~~vRni~~yN~k~~~~~~~~~~ 561 (806)
=+.+----+|.-+.|. -+ ++...|.+
T Consensus 236 pd~iivgEiR~~ea~~-~l-~a~~tGh~ 261 (323)
T d1g6oa_ 236 PDRIILGELRSSEAYD-FY-NVLCSGHK 261 (323)
T ss_dssp CSEEEESCCCSTHHHH-HH-HHHHTTCS
T ss_pred CCCCCCCCCCCHHHHH-HH-HHHHHCCC
T ss_conf 9854578667465999-99-99981698
No 5
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=96.45 E-value=0.016 Score=35.14 Aligned_cols=43 Identities=19% Similarity=0.451 Sum_probs=31.4
Q ss_pred EEEEHHHHHHHHHHCC------CHHHHHHHHHHHHHHHCCEEEEEEECCC
Q ss_conf 8776344688887321------0058899999986641423799996577
Q gi|254780799|r 592 IVVVIDEMADLMMVAR------KDIESAVQRLAQMARASGIHVIMATQRP 635 (806)
Q Consensus 592 ivviiDElaDlmm~~~------~~ve~~i~rlaq~ara~GiHli~aTqrP 635 (806)
=|||||=+ .+|.... .++.....+|.+.|+--|+|.|+.+|--
T Consensus 149 ~~vvID~l-~~l~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~vi~~~q~~ 197 (277)
T d1cr2a_ 149 DVIILDHI-SIVVSASGESDERKMIDNLMTKLKGFAKSTGVVLVVICHLK 197 (277)
T ss_dssp SEEEEEEE-EC----------CHHHHHHHHHHHHHHHHHCCEEEEEEECC
T ss_pred CEEEECCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
T ss_conf 25997054-21203465443067789999999997650165520310356
No 6
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=94.64 E-value=0.011 Score=36.36 Aligned_cols=57 Identities=30% Similarity=0.541 Sum_probs=37.7
Q ss_pred HCCCCCCCCEEEEECCCCCE--EEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEE-ECCCHHHH
Q ss_conf 10456666667854100202--35530477406799999999999829957847888-52310011
Q gi|254780799|r 437 NLGKSIEGKPIIADLARMPH--LLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIM-IDPKMLEL 499 (806)
Q Consensus 437 aLGKdI~G~pvv~DLakMPH--LLIAGtTGSGKSV~iN~iI~SlLyk~~P~evklil-iDPK~vEl 499 (806)
.||-+-.--..+-.+...|+ +||+|.||||||--+++|+-.+ .++. .+++. =|| +|.
T Consensus 139 ~LG~~~~~~~~l~~l~~~~~GliLvtGpTGSGKSTTl~~~l~~~---~~~~-~~i~tiEdP--iE~ 198 (401)
T d1p9ra_ 139 SLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQEL---NSSE-RNILTVEDP--IEF 198 (401)
T ss_dssp GSCCCHHHHHHHHHHHTSSSEEEEEECSTTSCHHHHHHHHHHHH---CCTT-SCEEEEESS--CCS
T ss_pred HHCCCHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHH---CCCC-CEEEEECCC--CCC
T ss_conf 30135777899999986410548987678777447799986662---5787-469996267--434
No 7
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=94.44 E-value=0.0097 Score=36.75 Aligned_cols=45 Identities=13% Similarity=0.327 Sum_probs=34.2
Q ss_pred EEEEEHHHHHHHHHH---CCCHHHHHHHHHHHHHHHCCEEEEEEECCC
Q ss_conf 687763446888873---210058899999986641423799996577
Q gi|254780799|r 591 YIVVVIDEMADLMMV---ARKDIESAVQRLAQMARASGIHVIMATQRP 635 (806)
Q Consensus 591 ~ivviiDElaDlmm~---~~~~ve~~i~rlaq~ara~GiHli~aTqrP 635 (806)
.-+||||-+..+.-. ...++...+.+|.++|+..|+++|+..|-.
T Consensus 133 ~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~v~H~~ 180 (274)
T d1nlfa_ 133 RRLMVLDTLRRFHIEEENASGPMAQVIGRMEAIAADTGCSIVFLHHAS 180 (274)
T ss_dssp CSEEEEECGGGGCCSCTTCHHHHHHHHHHHHHHHHHHCCEEEEEEEC-
T ss_pred CCEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHCC
T ss_conf 658962813542266523225689999887777644797540131005
No 8
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=94.37 E-value=0.16 Score=27.71 Aligned_cols=47 Identities=13% Similarity=0.136 Sum_probs=36.6
Q ss_pred CEEEEEHHHHHHHHHHC-CCHHHHHHHHHHHHHHHCCEEEEEEECCCC
Q ss_conf 86877634468888732-100588999999866414237999965777
Q gi|254780799|r 590 PYIVVVIDEMADLMMVA-RKDIESAVQRLAQMARASGIHVIMATQRPS 636 (806)
Q Consensus 590 p~ivviiDElaDlmm~~-~~~ve~~i~rlaq~ara~GiHli~aTqrPs 636 (806)
..-++|||-+..+.... ..++...+..|-.+++..|++.++..|...
T Consensus 116 ~~~~vviDs~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~ 163 (242)
T d1tf7a2 116 KPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQ 163 (242)
T ss_dssp CCSEEEEECHHHHTSSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSS
T ss_pred CCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEE
T ss_conf 885332204314304899999999999999999986983999985675
No 9
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.62 E-value=0.03 Score=33.11 Aligned_cols=78 Identities=12% Similarity=0.165 Sum_probs=46.2
Q ss_pred CCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCEEEEEECCCCCCHHHC
Q ss_conf 46986877634468888732100588999999866414237999965777535543554110251587645866421233
Q gi|254780799|r 587 QHMPYIVVVIDEMADLMMVARKDIESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKANFPTRISFQVSSKIDSRTIL 666 (806)
Q Consensus 587 ~~lp~ivviiDElaDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ikan~p~riaf~v~s~~dSrtil 666 (806)
...++-|+|+||.-.|. ++....+.++-+.. ..-..+|++|.+++-. +.+ |.
T Consensus 105 ~~~~~~viiiDe~d~l~----~~~~~~l~~~~~~~-~~~~~~i~~~~~~~~~----------~~~-------------l~ 156 (237)
T d1sxjd2 105 PCPPYKIIILDEADSMT----ADAQSALRRTMETY-SGVTRFCLICNYVTRI----------IDP-------------LA 156 (237)
T ss_dssp CCCSCEEEEETTGGGSC----HHHHHHHHHHHHHT-TTTEEEEEEESCGGGS----------CHH-------------HH
T ss_pred CCCCCEEEEEECCCCCC----HHHHHHHHHCCCCC-CCCCCCCCCCCCCCCC----------CCC-------------CC
T ss_conf 56673699995513367----77788876301222-2333321224664222----------331-------------11
Q ss_pred CCCCHHHHCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHC
Q ss_conf 8864578658875477368983258883348988999999999712
Q gi|254780799|r 667 GEQGAEQLLGQGDMLYMTGGGRVQRIHGPFVSDIEVEKVVSHLKTQ 712 (806)
Q Consensus 667 d~~gae~Llg~gdml~~~~~~~~~r~~g~~v~~~ev~~v~~~~~~q 712 (806)
++..+++=.-.+.+|+.++...+..+
T Consensus 157 --------------------sr~~~i~f~~~~~~~~~~~L~~i~~~ 182 (237)
T d1sxjd2 157 --------------------SQCSKFRFKALDASNAIDRLRFISEQ 182 (237)
T ss_dssp --------------------HHSEEEECCCCCHHHHHHHHHHHHHT
T ss_pred --------------------CHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf --------------------00011023333332110010114555
No 10
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=93.19 E-value=0.027 Score=33.40 Aligned_cols=21 Identities=38% Similarity=0.703 Sum_probs=19.0
Q ss_pred CEEEEEECCCCHHHHHHHHHH
Q ss_conf 023553047740679999999
Q gi|254780799|r 455 PHLLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 455 PHLLIAGtTGSGKSV~iN~iI 475 (806)
..+++.|.||+|||-.+|+|+
T Consensus 33 l~I~LvG~tg~GKSSliN~il 53 (257)
T d1h65a_ 33 LTILVMGKGGVGKSSTVNSII 53 (257)
T ss_dssp EEEEEEESTTSSHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHH
T ss_conf 489998999986999999985
No 11
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=92.91 E-value=0.087 Score=29.59 Aligned_cols=41 Identities=27% Similarity=0.427 Sum_probs=33.4
Q ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCH
Q ss_conf 2023553047740679999999999982995784788852310
Q gi|254780799|r 454 MPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKM 496 (806)
Q Consensus 454 MPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~ 496 (806)
-+.+=|.|..|+|||-.||.++.-+..+ ...|-.+.+||--
T Consensus 54 ~~~IgitG~pGaGKSTLi~~l~~~~~~~--g~~vavlavDpss 94 (327)
T d2p67a1 54 TLRLGVTGTPGAGKSTFLEAFGMLLIRE--GLKVAVIAVDPSS 94 (327)
T ss_dssp SEEEEEEECTTSCHHHHHHHHHHHHHHT--TCCEEEEEECCC-
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEECCCCCE
T ss_conf 3289743899998999999999999756--9833220377761
No 12
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=91.15 E-value=0.065 Score=30.54 Aligned_cols=31 Identities=32% Similarity=0.404 Sum_probs=26.6
Q ss_pred CCCCE-EEEEECCCCHHHHHHHHHHHHHHHHC
Q ss_conf 00202-35530477406799999999999829
Q gi|254780799|r 452 ARMPH-LLIAGTTGSGKSVAINTMILSLLYRM 482 (806)
Q Consensus 452 akMPH-LLIAGtTGSGKSV~iN~iI~SlLyk~ 482 (806)
.+.|| +|+.|..|+||+.....+..+|+-..
T Consensus 21 ~~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~ 52 (207)
T d1a5ta2 21 GRGHHALLIQALPGMGDDALIYALSRYLLCQQ 52 (207)
T ss_dssp TCCCSEEEEECCTTSCHHHHHHHHHHHHTCSS
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHCCCCC
T ss_conf 99673798889998759999999998210101
No 13
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=90.88 E-value=0.17 Score=27.51 Aligned_cols=45 Identities=20% Similarity=0.279 Sum_probs=35.0
Q ss_pred EEEHHHHHHHHHHCCCH--HHHHHHHHHHHHHHCCEEEEEEECCCCC
Q ss_conf 77634468888732100--5889999998664142379999657775
Q gi|254780799|r 593 VVVIDEMADLMMVARKD--IESAVQRLAQMARASGIHVIMATQRPSV 637 (806)
Q Consensus 593 vviiDElaDlmm~~~~~--ve~~i~rlaq~ara~GiHli~aTqrPsv 637 (806)
++|||-+.+++....++ .-....++.+.++..|+..++..|.+..
T Consensus 128 ~viiD~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (242)
T d1tf7a1 128 RVSIDSVTSVFQQYDASSVVRRELFRLVARLKQIGATTVMTTERIEE 174 (242)
T ss_dssp EEEEECSTTTSTTTCCHHHHHHHHHHHHHHHHHHTCEEEEEEECSSS
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 20020788998760572678999999999998639716884210255
No 14
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.82 E-value=0.097 Score=29.24 Aligned_cols=29 Identities=31% Similarity=0.614 Sum_probs=24.3
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf 00202355304774067999999999998
Q gi|254780799|r 452 ARMPHLLIAGTTGSGKSVAINTMILSLLY 480 (806)
Q Consensus 452 akMPHLLIAGtTGSGKSV~iN~iI~SlLy 480 (806)
.++||+|+-|.+|+||+..+..+.-.+..
T Consensus 33 ~~~~~lLl~Gp~G~GKttl~~~la~~l~~ 61 (227)
T d1sxjc2 33 GKLPHLLFYGPPGTGKTSTIVALAREIYG 61 (227)
T ss_dssp TCCCCEEEECSSSSSHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHC
T ss_conf 99985999889987755899999998516
No 15
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=89.66 E-value=0.11 Score=28.75 Aligned_cols=23 Identities=39% Similarity=0.706 Sum_probs=20.8
Q ss_pred CCCEEEEEECCCCHHHHHHHHHH
Q ss_conf 02023553047740679999999
Q gi|254780799|r 453 RMPHLLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 453 kMPHLLIAGtTGSGKSV~iN~iI 475 (806)
..|+..|.|-||+|||--||++.
T Consensus 22 ~~~~I~lvG~~n~GKSTLin~L~ 44 (195)
T d1svia_ 22 GLPEIALAGRSNVGKSSFINSLI 44 (195)
T ss_dssp CCCEEEEEEBTTSSHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHC
T ss_conf 99899998999987999999852
No 16
>d1ub9a_ a.4.5.28 (A:) Hypothetical protein PH1061 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=89.27 E-value=0.28 Score=25.86 Aligned_cols=61 Identities=18% Similarity=0.215 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHH-HCCCCCEEEECH
Q ss_conf 7038999999996598500014222001177899999999977986802-278872673171
Q gi|254780799|r 740 DDLYKQAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGPA-SSTGKREILISS 800 (806)
Q Consensus 740 d~l~~~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~-~g~~~r~vl~~~ 800 (806)
+|.--+.+.+....+.+|.+-|++++.+....-.|.++.||+.|+|-.. +...+|.+.++-
T Consensus 15 ~p~r~~IL~~L~~~~~~~~~eLa~~l~is~~~vs~~l~~L~~~glV~~~~~~~d~r~~~~~L 76 (100)
T d1ub9a_ 15 NPVRLGIMIFLLPRRKAPFSQIQKVLDLTPGNLDSHIRVLERNGLVKTYKVIADRPRTVVEI 76 (100)
T ss_dssp SHHHHHHHHHHHHHSEEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEE
T ss_pred CHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHCEEEEEECCCCCCCCCCCC
T ss_conf 99999999876047990199999998625432309999882310368887576776534557
No 17
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=89.12 E-value=0.15 Score=27.75 Aligned_cols=28 Identities=43% Similarity=0.643 Sum_probs=24.2
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf 0202355304774067999999999998
Q gi|254780799|r 453 RMPHLLIAGTTGSGKSVAINTMILSLLY 480 (806)
Q Consensus 453 kMPHLLIAGtTGSGKSV~iN~iI~SlLy 480 (806)
+.||+|+-|-.|+||+-.+.++.-.+..
T Consensus 44 ~~~~lll~Gp~G~GKTtla~~iak~l~~ 71 (231)
T d1iqpa2 44 SMPHLLFAGPPGVGKTTAALALARELFG 71 (231)
T ss_dssp CCCEEEEESCTTSSHHHHHHHHHHHHHG
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 9976999789997487999999999873
No 18
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.03 E-value=0.22 Score=26.64 Aligned_cols=33 Identities=33% Similarity=0.624 Sum_probs=28.0
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHH
Q ss_conf 020235530477406799999999999829957
Q gi|254780799|r 453 RMPHLLIAGTTGSGKSVAINTMILSLLYRMTPA 485 (806)
Q Consensus 453 kMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~ 485 (806)
+.||+|+-|..|+||+-..+.++-+|..+....
T Consensus 35 ~~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~ 67 (224)
T d1sxjb2 35 NMPHMIISGMPGIGKTTSVHCLAHELLGRSYAD 67 (224)
T ss_dssp CCCCEEEECSTTSSHHHHHHHHHHHHHGGGHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 987499988999870546999999972566432
No 19
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=88.95 E-value=0.23 Score=26.46 Aligned_cols=138 Identities=19% Similarity=0.261 Sum_probs=67.6
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 02355304774067999999999998299578478885231001110277034312233430456689999999999999
Q gi|254780799|r 455 PHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKMLELSVYDGIPNLLTPVVTNPQKAVTVLKWLVCEMEERY 534 (806)
Q Consensus 455 PHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~vEls~Y~~iPHLl~pVvTd~~kA~~aL~w~V~EMe~RY 534 (806)
|-.+|-|--|+||+.-+..+|..|+....-...|.++.=| ..||+.-|.......-.++
T Consensus 164 ~~~vI~G~pGTGKTt~i~~~l~~l~~~~~~~~~~I~l~Ap---------------------TgkAA~~L~e~~~~~~~~~ 222 (359)
T d1w36d1 164 RISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAP---------------------TGKAAARLTESLGKALRQL 222 (359)
T ss_dssp SEEEEECCTTSTHHHHHHHHHHHHHHTCSSCCCCEEEEBS---------------------SHHHHHHHHHHHTHHHHHS
T ss_pred CEEEEECCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEECC---------------------CHHHHHHHHHHHHHHHHHC
T ss_conf 8599976898875216999999999987526982898437---------------------5999999998887777645
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCHHHHHH
Q ss_conf 99987089968999999998874478667754467765454322233223234698687763446888873210058899
Q gi|254780799|r 535 QKMSKIGVRNIDGFNLKVAQYHNTGKKFNRTVQTGFDRKTGEAIYETEHFDFQHMPYIVVVIDEMADLMMVARKDIESAV 614 (806)
Q Consensus 535 ~l~a~~~vRni~~yN~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~ivviiDElaDlmm~~~~~ve~~i 614 (806)
+......++ .......+++- .+..+..... ....-.++|+=||||||-.-+ .- + ..
T Consensus 223 ------~~~~~~~~~-----~~~~~~t~~~l--l~~~~~~~~~----~~~~~~~l~~d~lIIDEaSmv---~~---~-l~ 278 (359)
T d1w36d1 223 ------PLTDEQKKR-----IPEDASTLHRL--LGAQPGSQRL----RHHAGNPLHLDVLVVDEASMI---DL---P-MM 278 (359)
T ss_dssp ------SCCSCCCCS-----CSCCCBTTTSC--C---------------CTTSCCSCSEEEECSGGGC---BH---H-HH
T ss_pred ------CCHHHHHHH-----HHHHHHHHHHH--HHHHHCCHHH----HHHHHCCCCCCEEEEHHHHCC---CH---H-HH
T ss_conf ------810445542-----01345578998--7631000677----775436665413465332144---89---9-99
Q ss_pred HHHHHHHHHCCEEEEEEE---CCCCCC
Q ss_conf 999986641423799996---577753
Q gi|254780799|r 615 QRLAQMARASGIHVIMAT---QRPSVD 638 (806)
Q Consensus 615 ~rlaq~ara~GiHli~aT---qrPsvd 638 (806)
.++-... .-|.|+|+.= |=|||+
T Consensus 279 ~~ll~~~-~~~~~lILvGD~~QLppV~ 304 (359)
T d1w36d1 279 SRLIDAL-PDHARVIFLGDRDQLASVE 304 (359)
T ss_dssp HHHHHTC-CTTCEEEEEECTTSGGGTS
T ss_pred HHHHHHH-CCCCEEEEECCHHHCCCCC
T ss_conf 9999872-5999899977722166878
No 20
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=88.88 E-value=0.28 Score=25.77 Aligned_cols=178 Identities=19% Similarity=0.196 Sum_probs=77.8
Q ss_pred EHHHCCCHHHHHCCCCCHHHCCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCH-
Q ss_conf 3423072134302210002104566666678541002023553047740679999999999982995784788852310-
Q gi|254780799|r 418 LRDLIVSRVFEKNQCDLAINLGKSIEGKPIIADLARMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKM- 496 (806)
Q Consensus 418 lreil~s~~f~~s~~~L~iaLGKdI~G~pvv~DLakMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~- 496 (806)
=++.++-..||..- +..++++ +.||.+.||||||.+.-.++...+.+. +. |.+.|=|-+
T Consensus 4 ~~~~~~pr~~Q~~~--~~~~~~~---------------n~lv~~pTGsGKT~i~~~~~~~~~~~~-~~--~il~i~P~~~ 63 (200)
T d1wp9a1 4 RRDLIQPRIYQEVI--YAKCKET---------------NCLIVLPTGLGKTLIAMMIAEYRLTKY-GG--KVLMLAPTKP 63 (200)
T ss_dssp CHHHHCCCHHHHHH--HHHGGGS---------------CEEEECCTTSCHHHHHHHHHHHHHHHS-CS--CEEEECSSHH
T ss_pred CCCCCCCCHHHHHH--HHHHHCC---------------CEEEEECCCCCHHHHHHHHHHHHHHHC-CC--CEEEECCCHH
T ss_conf 24778988999999--9999639---------------969991899728899999999999706-98--1899737057
Q ss_pred H------HHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH--CCCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 0------111027703431223343045668999999999999999987--08996899999999887447866775446
Q gi|254780799|r 497 L------ELSVYDGIPNLLTPVVTNPQKAVTVLKWLVCEMEERYQKMSK--IGVRNIDGFNLKVAQYHNTGKKFNRTVQT 568 (806)
Q Consensus 497 v------Els~Y~~iPHLl~pVvTd~~kA~~aL~w~V~EMe~RY~l~a~--~~vRni~~yN~k~~~~~~~~~~~~~~~~~ 568 (806)
+ ++.-|-+.++.-.-..+.- .....|++.+.. ..+-+........ ..+.
T Consensus 64 L~~q~~~~~~~~~~~~~~~v~~~~~~-----------~~~~~~~~~~~~~~i~i~t~~~~~~~~----~~~~-------- 120 (200)
T d1wp9a1 64 LVLQHAESFRRLFNLPPEKIVALTGE-----------KSPEERSKAWARAKVIVATPQTIENDL----LAGR-------- 120 (200)
T ss_dssp HHHHHHHHHHHHBCSCGGGEEEECSC-----------SCHHHHHHHHHHCSEEEECHHHHHHHH----HTTS--------
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEECC-----------CCHHHHHHHHHCCCCCCCCCCHHHHHH----HHHH--------
T ss_conf 77788999998633554201342036-----------645677776511422234320257787----6313--------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCC--CCCCCHHHHH
Q ss_conf 77654543222332232346986877634468888732100588999999866414237999965777--5355435541
Q gi|254780799|r 569 GFDRKTGEAIYETEHFDFQHMPYIVVVIDEMADLMMVARKDIESAVQRLAQMARASGIHVIMATQRPS--VDVITGTIKA 646 (806)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~lp~ivviiDElaDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPs--vdvitg~ika 646 (806)
..... +=.||+||.-.+. . ..-... ...--+.++...|++..|-.|. .+.+--+++-
T Consensus 121 ---------------~~~~~--~~~vIiDE~H~~~--~-~~~~~~-~~~~~~~~~~~~~~l~~SATp~~~~~~~~~~~~~ 179 (200)
T d1wp9a1 121 ---------------ISLED--VSLIVFDEAHRAV--G-NYAYVF-IAREYKRQAKNPLVIGLTASPGSTPEKIMEVINN 179 (200)
T ss_dssp ---------------CCTTS--CSEEEEETGGGCS--T-TCHHHH-HHHHHHHHCSSCCEEEEESCSCSSHHHHHHHHHH
T ss_pred ---------------HHCCC--CCEEEEEEHHHHH--C-CHHHHH-HHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHC
T ss_conf ---------------31156--6618998621131--2-216899-9999986589985799996179739999999846
Q ss_pred CCCCEEEEEECCC
Q ss_conf 1025158764586
Q gi|254780799|r 647 NFPTRISFQVSSK 659 (806)
Q Consensus 647 n~p~riaf~v~s~ 659 (806)
.-.+.|-++-...
T Consensus 180 l~~~~i~~~~~~~ 192 (200)
T d1wp9a1 180 LGIEHIEYRSENS 192 (200)
T ss_dssp TTCCEEEECCTTS
T ss_pred CCCEEEEECCCCC
T ss_conf 9954999689998
No 21
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.85 E-value=0.13 Score=28.19 Aligned_cols=20 Identities=50% Similarity=0.712 Sum_probs=10.9
Q ss_pred EEEEEECCCCHHHHHHHHHH
Q ss_conf 23553047740679999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI 475 (806)
+..|.|.||+|||-.||+++
T Consensus 58 ~Iai~G~~n~GKSSLiNaL~ 77 (400)
T d1tq4a_ 58 NVAVTGETGSGKSSFINTLR 77 (400)
T ss_dssp EEEEEECTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
T ss_conf 79998999997899999995
No 22
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=87.67 E-value=0.55 Score=23.61 Aligned_cols=39 Identities=21% Similarity=0.431 Sum_probs=26.3
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEEC
Q ss_conf 002023553047740679999999999982995784788852
Q gi|254780799|r 452 ARMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMID 493 (806)
Q Consensus 452 akMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliD 493 (806)
...+|+|+-|-+|+||+..++++.-- |. .....+++.+.
T Consensus 41 ~~~~~lll~GppGtGKT~l~~~l~~~-l~--~~~~~~~~~~~ 79 (276)
T d1fnna2 41 HHYPRATLLGRPGTGKTVTLRKLWEL-YK--DKTTARFVYIN 79 (276)
T ss_dssp SSCCEEEEECCTTSSHHHHHHHHHHH-HT--TSCCCEEEEEE
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHHH-HH--CCCCCCEEEEC
T ss_conf 88881688898999899999999999-75--44688578732
No 23
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=87.65 E-value=0.18 Score=27.26 Aligned_cols=24 Identities=21% Similarity=0.538 Sum_probs=21.5
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHH
Q ss_conf 020235530477406799999999
Q gi|254780799|r 453 RMPHLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 453 kMPHLLIAGtTGSGKSV~iN~iI~ 476 (806)
.-|-+.|.|...||||-.||+|+-
T Consensus 25 ~~P~ivvvG~~SsGKSsliNaLlg 48 (299)
T d2akab1 25 DLPQIAVVGGQSAGKSSVLENFVG 48 (299)
T ss_dssp CCCEEEEEEBTTSCHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHC
T ss_conf 888699976898979999999968
No 24
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=86.98 E-value=0.87 Score=22.12 Aligned_cols=75 Identities=13% Similarity=0.172 Sum_probs=50.9
Q ss_pred CCCCEE-EEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHH----HHHHCCCCHHHHCC--CCCCHHHHHHHHH
Q ss_conf 002023-5530477406799999999999829957847888523100----11102770343122--3343045668999
Q gi|254780799|r 452 ARMPHL-LIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKML----ELSVYDGIPNLLTP--VVTNPQKAVTVLK 524 (806)
Q Consensus 452 akMPHL-LIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~v----Els~Y~~iPHLl~p--VvTd~~kA~~aL~ 524 (806)
.+.||. +..|-||+||+-.+==+=..++.+. ..|-||=.|..|. -|..|-.+ |=.| ++.+++..+..++
T Consensus 8 ~~~p~vi~lvGptGvGKTTTiAKLAa~~~~~~--~kV~lit~Dt~R~gA~eQL~~~a~~--l~i~~~~~~~~~d~~~~~~ 83 (213)
T d1vmaa2 8 PEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEG--KSVVLAAADTFRAAAIEQLKIWGER--VGATVISHSEGADPAAVAF 83 (213)
T ss_dssp SSSCEEEEEECCTTSSHHHHHHHHHHHHHHTT--CCEEEEEECTTCHHHHHHHHHHHHH--HTCEEECCSTTCCHHHHHH
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CCEEEEEECCCCCCHHHHHHHHHHH--CCCCCCCCCCCCCHHHHHH
T ss_conf 99998999989999988999999999999779--9069996013342046788877643--2764103677776899878
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780799|r 525 WLVCEM 530 (806)
Q Consensus 525 w~V~EM 530 (806)
.+....
T Consensus 84 ~~~~~~ 89 (213)
T d1vmaa2 84 DAVAHA 89 (213)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 878999
No 25
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=86.64 E-value=0.36 Score=24.96 Aligned_cols=24 Identities=25% Similarity=0.361 Sum_probs=16.5
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 235530477406799999999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLL 479 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlL 479 (806)
+++++..|||||+.|---.|+.-+
T Consensus 42 ~~il~apTGsGKT~~a~l~i~~~~ 65 (202)
T d2p6ra3 42 NLLLAMPTAAGKTLLAEMAMVREA 65 (202)
T ss_dssp CEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 989986899851178999999876
No 26
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.58 E-value=0.45 Score=24.25 Aligned_cols=38 Identities=18% Similarity=0.254 Sum_probs=29.2
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCC
Q ss_conf 2355304774067999999999998299578478885231
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPK 495 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK 495 (806)
|++|.|..|+|||.-+..++-.+.-+ -..|..+..+|=
T Consensus 3 ~v~ItG~~GtGKTtl~~~i~~~l~~~--~~~v~~~~~~~~ 40 (189)
T d2i3ba1 3 HVFLTGPPGVGKTTLIHKASEVLKSS--GVPVDGFYTEEV 40 (189)
T ss_dssp CEEEESCCSSCHHHHHHHHHHHHHHT--TCCCEEEECCEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC--CCEEEEEEECCC
T ss_conf 99998899971999999999999977--997999984550
No 27
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=86.07 E-value=0.25 Score=26.13 Aligned_cols=23 Identities=26% Similarity=0.676 Sum_probs=21.0
Q ss_pred CCEEEEEECCCCHHHHHHHHHHH
Q ss_conf 20235530477406799999999
Q gi|254780799|r 454 MPHLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 454 MPHLLIAGtTGSGKSV~iN~iI~ 476 (806)
.|-+.|.|...||||-.||+|+=
T Consensus 24 lP~ivVvG~~ssGKSSliNaLlG 46 (306)
T d1jwyb_ 24 LPQIVVVGSQSSGKSSVLENIVG 46 (306)
T ss_dssp CCEEEEEECSSSSHHHHHHHHHT
T ss_pred CCEEEEEECCCCCHHHHHHHHHC
T ss_conf 88599981898979999999968
No 28
>d1es6a2 b.31.1.1 (A:201-321) EV matrix protein {Ebola virus [TaxId: 205488]}
Probab=85.52 E-value=0.11 Score=28.84 Aligned_cols=60 Identities=25% Similarity=0.399 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCEEEEEECCCCCCEEEEHHHCCCHH--HHHCCCCCHHHCCCCCCCCEE
Q ss_conf 39999978899998863001210003-8861255530245662387342307213--430221000210456666667
Q gi|254780799|r 373 KSSRIIGLSDDIARSMSAISARVAVI-PRRNAIGIELPNDIRETVMLRDLIVSRV--FEKNQCDLAINLGKSIEGKPI 447 (806)
Q Consensus 373 KvSKI~nLadDIA~aLsa~svRIapI-PGK~~VGIEiPN~~r~~V~lreil~s~~--f~~s~~~L~iaLGKdI~G~pv 447 (806)
|+..|.|+-.|+ .|+|| |-|+.+|||||..-..- |.-++ -+|..--+|+-|-|-|.=.|+
T Consensus 36 kiq~imn~~qd~---------kivpidptkni~gievpellv~~------ltgkk~~~kngqpiipvllpkyigldpi 98 (121)
T d1es6a2 36 KIQAIMTSLQDF---------KIVPIDPTKNIMGIEVPETLVLK------LTGKKVTSKNGQPIIPVLLPKYIGLDPV 98 (121)
T ss_dssp HHHHHHHHGGGC---------EEEEEEGGGTEEEEECCHHHHHH------HTC-------CCCEEEEECCTTSCCCCT
T ss_pred HHHHHHHHCCCC---------EEEECCCCCCEEEECCHHHHHHH------HHCCCCCCCCCCEEEEEECCCCCCCCCC
T ss_conf 999999860235---------06612775552222118999998------7267666778966323620110266878
No 29
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=85.14 E-value=0.3 Score=25.61 Aligned_cols=32 Identities=28% Similarity=0.390 Sum_probs=26.5
Q ss_pred CCCE-EEEEECCCCHHHHHHHHHHHHHHHHCCH
Q ss_conf 0202-3553047740679999999999982995
Q gi|254780799|r 453 RMPH-LLIAGTTGSGKSVAINTMILSLLYRMTP 484 (806)
Q Consensus 453 kMPH-LLIAGtTGSGKSV~iN~iI~SlLyk~~P 484 (806)
+.|| +|+-|..|+||+-....+.-.|.+....
T Consensus 32 ~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~ 64 (239)
T d1njfa_ 32 RIHHAYLFSGTRGVGKTSIARLLAKGLNCETGI 64 (239)
T ss_dssp CCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCS
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 987059888899875899999999984685566
No 30
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=84.27 E-value=0.37 Score=24.91 Aligned_cols=135 Identities=16% Similarity=0.275 Sum_probs=67.2
Q ss_pred EEEEECCC---CCEEEEEECCCCHHH-HHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHCCCCHHHHCCCCCCHHHHHH
Q ss_conf 67854100---202355304774067-99999999999829957847888523100111027703431223343045668
Q gi|254780799|r 446 PIIADLAR---MPHLLIAGTTGSGKS-VAINTMILSLLYRMTPAQCRLIMIDPKMLELSVYDGIPNLLTPVVTNPQKAVT 521 (806)
Q Consensus 446 pvv~DLak---MPHLLIAGtTGSGKS-V~iN~iI~SlLyk~~P~evkliliDPK~vEls~Y~~iPHLl~pVvTd~~kA~~ 521 (806)
-+..|++. | +-|+-|-|||||. |.+.+|...+-- .-+-++.=|-.
T Consensus 66 ~i~~~~~~~~~~-~~LL~GdvGsGKT~V~~~a~~~~~~~-----g~qv~~l~Pt~------------------------- 114 (233)
T d2eyqa3 66 AVLSDMCQPLAM-DRLVCGDVGFGKTEVAMRAAFLAVDN-----HKQVAVLVPTT------------------------- 114 (233)
T ss_dssp HHHHHHHSSSCC-EEEEECCCCTTTHHHHHHHHHHHHTT-----TCEEEEECSSH-------------------------
T ss_pred HHHHHHHCCCCC-CEEEECCCCCCCHHHHHHHHHHHHHC-----CCCEEEECCHH-------------------------
T ss_conf 999998545766-70898388877289999999999976-----89569974688-------------------------
Q ss_pred HHHHHHHHHHHHHHH-HHHCCC------CCHHHHH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE--
Q ss_conf 999999999999999-987089------9689999-999988744786677544677654543222332232346986--
Q gi|254780799|r 522 VLKWLVCEMEERYQK-MSKIGV------RNIDGFN-LKVAQYHNTGKKFNRTVQTGFDRKTGEAIYETEHFDFQHMPY-- 591 (806)
Q Consensus 522 aL~w~V~EMe~RY~l-~a~~~v------Rni~~yN-~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~-- 591 (806)
-+...+.+|.+- |...++ +....-. +++.+.-..|+.- -+.-....-..++||
T Consensus 115 ---~La~Q~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~~~--------------iviGths~l~~~~~f~~ 177 (233)
T d2eyqa3 115 ---LLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKID--------------ILIGTHKLLQSDVKFKD 177 (233)
T ss_dssp ---HHHHHHHHHHHHHSTTTTCCEEEESTTSCHHHHHHHHHHHHTTCCS--------------EEEECTHHHHSCCCCSS
T ss_pred ---HHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCC--------------EEEEEHHHHCCCCCCCC
T ss_conf ---7679999999998724797797635765312699999999679978--------------89742023306776555
Q ss_pred -EEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCC
Q ss_conf -8776344688887321005889999998664142379999657775
Q gi|254780799|r 592 -IVVVIDEMADLMMVARKDIESAVQRLAQMARASGIHVIMATQRPSV 637 (806)
Q Consensus 592 -ivviiDElaDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPsv 637 (806)
=.|||||=-|. .=|. |-.-.+.+.++|+++.|=.|+.
T Consensus 178 LgLiIiDEeH~f---g~kQ------~~~l~~~~~~~~~l~~SATPip 215 (233)
T d2eyqa3 178 LGLLIVDEEHRF---GVRH------KERIKAMRANVDILTLTATPIP 215 (233)
T ss_dssp EEEEEEESGGGS---CHHH------HHHHHHHHTTSEEEEEESSCCC
T ss_pred CCCEEEECHHHH---HHHH------HHHHHHHCCCCCEEEEECCHHH
T ss_conf 463022231233---2578------9999961889988999655109
No 31
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=84.10 E-value=1.1 Score=21.39 Aligned_cols=73 Identities=15% Similarity=0.092 Sum_probs=45.8
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHH----HHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 5530477406799999999999829957847888523100----11102770343122334304566899999999999
Q gi|254780799|r 458 LIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKML----ELSVYDGIPNLLTPVVTNPQKAVTVLKWLVCEMEE 532 (806)
Q Consensus 458 LIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~v----Els~Y~~iPHLl~pVvTd~~kA~~aL~w~V~EMe~ 532 (806)
+..|.||+||+-.+==+=. .+ +..-..|-+|=.|..|. -|..|-++=-.-.-++-+.++...+++++...+..
T Consensus 10 ~lvGptGvGKTTTiaKLA~-~~-~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~~d~~~~~~~~~~~~~~ 86 (207)
T d1okkd2 10 LVVGVNGVGKTTTIAKLGR-YY-QNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAMKA 86 (207)
T ss_dssp EEECSTTSSHHHHHHHHHH-HH-HTTTCCEEEECCCCSSTTHHHHHHHHHHHHTCCEECCCTTCCHHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHH-HH-HHCCCCEEEEEECCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 9989999988999999999-99-97799079998136665402667640545682389616774278899998999998
No 32
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=83.91 E-value=1.1 Score=21.42 Aligned_cols=74 Identities=15% Similarity=0.139 Sum_probs=52.2
Q ss_pred CCCEEE-EEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHH----HHHHCCCCHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 020235-530477406799999999999829957847888523100----111027703431223343045668999999
Q gi|254780799|r 453 RMPHLL-IAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKML----ELSVYDGIPNLLTPVVTNPQKAVTVLKWLV 527 (806)
Q Consensus 453 kMPHLL-IAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~v----Els~Y~~iPHLl~pVvTd~~kA~~aL~w~V 527 (806)
|-||.. ..|.||+||.-.+==+-..+. ..-..|-+|-.|.-|. -|..|-.+--.-.-++.++.+.+.++++++
T Consensus 10 k~p~vi~lvGptGvGKTTTiAKLA~~~~--~~g~kV~lit~Dt~R~ga~eQL~~~a~~l~v~~~~~~~~~~~~~~~~~a~ 87 (211)
T d1j8yf2 10 KIPYVIMLVGVQGTGKATTAGKLAYFYK--KKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEKDVVGIAKRGV 87 (211)
T ss_dssp SSSEEEEEECSCCC----HHHHHHHHHH--HTTCCEEEEECCCSSHHHHHHHHHHHHHHTCCEECCTTCCCHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHH--HCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHH
T ss_conf 9998999989999998999999999999--77993699972023551567898740146842230244102447899999
Q ss_pred H
Q ss_conf 9
Q gi|254780799|r 528 C 528 (806)
Q Consensus 528 ~ 528 (806)
.
T Consensus 88 ~ 88 (211)
T d1j8yf2 88 E 88 (211)
T ss_dssp H
T ss_pred H
T ss_conf 8
No 33
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=83.39 E-value=0.47 Score=24.11 Aligned_cols=39 Identities=26% Similarity=0.372 Sum_probs=28.5
Q ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCH
Q ss_conf 2023553047740679999999999982995784788852310
Q gi|254780799|r 454 MPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKM 496 (806)
Q Consensus 454 MPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~ 496 (806)
+|.+.|.|.-|||||--+|.++-.|- ..-.|...++.-.
T Consensus 2 ~Pvi~itG~~GSGKTTL~~~L~~~l~----~~g~~v~v~~~d~ 40 (170)
T d1np6a_ 2 IPLLAFAAWSGTGKTTLLKKLIPALC----ARGIRPGLIKHTH 40 (170)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHHH----HTTCCEEEEEECC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHH----HCCCEEEEECCCC
T ss_conf 78899991899989999999999999----7797687741466
No 34
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.02 E-value=0.13 Score=28.25 Aligned_cols=28 Identities=18% Similarity=0.301 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHHHHHHCCEEEEEEECCC
Q ss_conf 0058899999986641423799996577
Q gi|254780799|r 608 KDIESAVQRLAQMARASGIHVIMATQRP 635 (806)
Q Consensus 608 ~~ve~~i~rlaq~ara~GiHli~aTqrP 635 (806)
.+......+|.++++...++.+.++|.-
T Consensus 146 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 173 (242)
T d1n0wa_ 146 MHLARFLRMLLRLADEFGVAVVITNQVV 173 (242)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEC---
T ss_pred HHHHHHHHHHHHHHHHCCEEEEEEEEEE
T ss_conf 8999999999976651563699977775
No 35
>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=82.68 E-value=1.3 Score=20.76 Aligned_cols=78 Identities=18% Similarity=0.300 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHCCEEEEEEECCC--CCCCCCHHHHHCCCCEEEEEECCCCCCHHHCCCCCHHHHCCCCCEEEECCC
Q ss_conf 058899999986641423799996577--753554355411025158764586642123388645786588754773689
Q gi|254780799|r 609 DIESAVQRLAQMARASGIHVIMATQRP--SVDVITGTIKANFPTRISFQVSSKIDSRTILGEQGAEQLLGQGDMLYMTGG 686 (806)
Q Consensus 609 ~ve~~i~rlaq~ara~GiHli~aTqrP--svdvitg~ikan~p~riaf~v~s~~dSrtild~~gae~Llg~gdml~~~~~ 686 (806)
+..+.|.|| |+.||++++||=|| ++..+--+...+.+. .++-.+|| ..|.+ +
T Consensus 23 ~~~~al~~l----~~~gi~v~~~TGR~~~~~~~l~~~~~~~~~~-------------~~I~~nGa--------~i~~~-~ 76 (260)
T d2rbka1 23 STIEALEAA----HAKGLKIFIATGRPKAIINNLSELQDRNLID-------------GYITMNGA--------YCFVG-E 76 (260)
T ss_dssp HHHHHHHHH----HHTTCEEEEECSSCGGGCCSCHHHHHTTCCC-------------EEEEGGGT--------EEEET-T
T ss_pred HHHHHHHHH----HHCCCEEEEECCCCHHHHHHHHHHHHCCCCC-------------CEEECCCC--------CCCCC-C
T ss_conf 999999999----9788999998899889999999997158877-------------34762774--------01257-5
Q ss_pred CCEEEEEECCCCHHHHHHHHHHHHHCCCC
Q ss_conf 83258883348988999999999712897
Q gi|254780799|r 687 GRVQRIHGPFVSDIEVEKVVSHLKTQGEA 715 (806)
Q Consensus 687 ~~~~r~~g~~v~~~ev~~v~~~~~~q~~~ 715 (806)
..+.-.+++.+++.++.+++++++-+
T Consensus 77 ---~~i~~~~l~~~~~~~i~~~~~~~~~~ 102 (260)
T d2rbka1 77 ---EVIYKSAIPQEEVKAMAAFCEKKGVP 102 (260)
T ss_dssp ---EEEEECCCCHHHHHHHHHHHHHHTCC
T ss_pred ---CCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf ---32104678889999999999973986
No 36
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=82.61 E-value=0.67 Score=22.96 Aligned_cols=39 Identities=26% Similarity=0.377 Sum_probs=23.1
Q ss_pred CCEEE-EEECCCCHHHHHHHHHHHHHHHHCCHH--HEEEEEEC
Q ss_conf 20235-530477406799999999999829957--84788852
Q gi|254780799|r 454 MPHLL-IAGTTGSGKSVAINTMILSLLYRMTPA--QCRLIMID 493 (806)
Q Consensus 454 MPHLL-IAGtTGSGKSV~iN~iI~SlLyk~~P~--evkliliD 493 (806)
-|=++ |||.+|||||---+.++..|+=+. +. .|-.|=+|
T Consensus 26 ~P~iIGi~G~qGSGKSTl~~~l~~~L~~~~-~~~~~v~~iS~D 67 (286)
T d1odfa_ 26 CPLFIFFSGPQGSGKSFTSIQIYNHLMEKY-GGEKSIGYASID 67 (286)
T ss_dssp SCEEEEEECCTTSSHHHHHHHHHHHHHHHH-GGGSCEEEEEGG
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHH-CCCCCEEEECCC
T ss_conf 988998379987889999999999999872-778606763567
No 37
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=82.33 E-value=0.23 Score=26.42 Aligned_cols=103 Identities=17% Similarity=0.151 Sum_probs=47.8
Q ss_pred EEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCEEEEEECCCCCCHHHCCCCC
Q ss_conf 68776344688887321005889999998664142379999657775355435541102515876458664212338864
Q gi|254780799|r 591 YIVVVIDEMADLMMVARKDIESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKANFPTRISFQVSSKIDSRTILGEQG 670 (806)
Q Consensus 591 ~ivviiDElaDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ikan~p~riaf~v~s~~dSrtild~~g 670 (806)
+=.+||||. +.|-..+...-. .+.+..+-.+.+.++.|..|...... ....|.|-. .+...+..+..-. .
T Consensus 101 ~~~vViDE~-H~~~~~~~~~~~---~l~~~~~~~~~~~v~~SAT~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~--~ 170 (305)
T d2bmfa2 101 YNLIIMDEA-HFTDPASIAARG---YISTRVEMGEAAGIFMTATPPGSRDP-FPQSNAPIM---DEEREIPERSWNS--G 170 (305)
T ss_dssp CSEEEEEST-TCCSHHHHHHHH---HHHHHHHHTSCEEEEECSSCTTCCCS-SCCCSSCEE---EEECCCCCSCCSS--C
T ss_pred EEEEEEEEE-EECCHHHHHHHH---HHHHHHCCCCCEEEEEECCCCCCEEE-ECCCCCCCE---EEEEECCHHHHHH--H
T ss_conf 008985301-112520578889---99984166531389941578764334-023478612---7998615888999--9
Q ss_pred HHHHCCCCCEEEECCCCCEEEEEECCCC-HHHHHHHHHHHHHCCCC
Q ss_conf 5786588754773689832588833489-88999999999712897
Q gi|254780799|r 671 AEQLLGQGDMLYMTGGGRVQRIHGPFVS-DIEVEKVVSHLKTQGEA 715 (806)
Q Consensus 671 ae~Llg~gdml~~~~~~~~~r~~g~~v~-~~ev~~v~~~~~~q~~~ 715 (806)
.+.+.-+++ . + --|+. -.+++++.++++.++..
T Consensus 171 ~~~~~~~~~-------~----~-lvf~~~~~~~~~l~~~L~~~~~~ 204 (305)
T d2bmfa2 171 HEWVTDFKG-------K----T-VWFVPSIKAGNDIAACLRKNGKK 204 (305)
T ss_dssp CHHHHSSCS-------C----E-EEECSCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHCC-------C----E-EEEECCHHHHHHHHHHHHHCCCC
T ss_conf 999996079-------9----8-99963099999999999867998
No 38
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=81.88 E-value=0.41 Score=24.59 Aligned_cols=28 Identities=32% Similarity=0.678 Sum_probs=22.0
Q ss_pred CEE-EEEECCCCHHHHHHHHHHHHHHHHC
Q ss_conf 023-5530477406799999999999829
Q gi|254780799|r 455 PHL-LIAGTTGSGKSVAINTMILSLLYRM 482 (806)
Q Consensus 455 PHL-LIAGtTGSGKSV~iN~iI~SlLyk~ 482 (806)
|++ +|-|..|||||-.+++|-..|-.+.
T Consensus 23 ~~ln~IvG~NGsGKStiL~Ai~~~l~~~~ 51 (292)
T g1f2t.1 23 EGINLIIGQNGSGKSSLLDAILVGLYWPL 51 (292)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHCSS
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf 98599998899889999999999855776
No 39
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=81.82 E-value=0.58 Score=23.43 Aligned_cols=20 Identities=30% Similarity=0.194 Sum_probs=15.0
Q ss_pred CEEEEEECCCCHHHHHHHHH
Q ss_conf 02355304774067999999
Q gi|254780799|r 455 PHLLIAGTTGSGKSVAINTM 474 (806)
Q Consensus 455 PHLLIAGtTGSGKSV~iN~i 474 (806)
.+.+|+..||||||++.-.+
T Consensus 86 ~~~ll~~~tG~GKT~~a~~~ 105 (206)
T d2fz4a1 86 KRGCIVLPTGSGKTHVAMAA 105 (206)
T ss_dssp SEEEEEESSSTTHHHHHHHH
T ss_pred CCCEEEECCCCCCEEHHHHH
T ss_conf 99099957899826437767
No 40
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=81.41 E-value=0.5 Score=23.94 Aligned_cols=24 Identities=38% Similarity=0.515 Sum_probs=17.7
Q ss_pred CCE-EEEEECCCCHHHHHHHHHHHH
Q ss_conf 202-355304774067999999999
Q gi|254780799|r 454 MPH-LLIAGTTGSGKSVAINTMILS 477 (806)
Q Consensus 454 MPH-LLIAGtTGSGKSV~iN~iI~S 477 (806)
|.. +++.|.+|||||-..+.++..
T Consensus 1 MkklIii~G~pGsGKTTla~~L~~~ 25 (152)
T d1ly1a_ 1 MKKIILTIGCPGSGKSTWAREFIAK 25 (152)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 9879999899999999999999995
No 41
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=80.61 E-value=0.5 Score=23.93 Aligned_cols=26 Identities=19% Similarity=0.307 Sum_probs=21.9
Q ss_pred ECCCCCEEEEEECCCCHHHHHHHHHH
Q ss_conf 41002023553047740679999999
Q gi|254780799|r 450 DLARMPHLLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 450 DLakMPHLLIAGtTGSGKSV~iN~iI 475 (806)
...+.||||+.|-.|+||+-++.++-
T Consensus 48 ~~~~~~~lll~GPpG~GKTt~a~~la 73 (253)
T d1sxja2 48 GSGVFRAAMLYGPPGIGKTTAAHLVA 73 (253)
T ss_dssp STTSCSEEEEECSTTSSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 78887449998799998889999999
No 42
>d2fbia1 a.4.5.28 (A:5-140) Probable transcriptional regulator PA4135 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=80.32 E-value=0.62 Score=23.19 Aligned_cols=59 Identities=10% Similarity=0.242 Sum_probs=47.2
Q ss_pred HHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHH-HCCCCCEEEECHHHH
Q ss_conf 99999996598500014222001177899999999977986802-278872673171253
Q gi|254780799|r 745 QAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGPA-SSTGKREILISSMEE 803 (806)
Q Consensus 745 ~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~-~g~~~r~vl~~~~~~ 803 (806)
.++..+...+..+.+-|.+++.+--+-..|+++.||++|+|--. +..-.|.+.+.-.++
T Consensus 34 ~vL~~l~~~~~~t~~~la~~~~i~~~~vs~~i~~L~~~gli~r~~~~~D~R~~~l~lT~~ 93 (136)
T d2fbia1 34 RVIRILRQQGEMESYQLANQACILRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLTEK 93 (136)
T ss_dssp HHHHHHHHHCSEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCHH
T ss_conf 999999976998999999998878988999999999889979845576575033305898
No 43
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=80.20 E-value=1.1 Score=21.31 Aligned_cols=49 Identities=22% Similarity=0.462 Sum_probs=32.0
Q ss_pred CCCEEEEECC----CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCH
Q ss_conf 6666785410----02023553047740679999999999982995784788852310
Q gi|254780799|r 443 EGKPIIADLA----RMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKM 496 (806)
Q Consensus 443 ~G~pvv~DLa----kMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~ 496 (806)
.|+|+.-|+. +==.+-|.|.+|||||--++.|. =-..|++= -|.+|-|+
T Consensus 47 ~g~pvL~~isl~i~~Ge~vaivG~nGsGKSTLl~~i~----Gl~~p~~G-~I~~~g~i 99 (281)
T d1r0wa_ 47 VGNPVLKNINLNIEKGEMLAITGSTGSGKTSLLMLIL----GELEASEG-IIKHSGRV 99 (281)
T ss_dssp TTCEEEEEEEEEECTTCEEEEEESTTSSHHHHHHHHH----TSSCCSEE-EEECCSCE
T ss_pred CCCEEEECEEEEECCCCEEEEECCCCCHHHHHHHHHH----CCCCCCCC-EEEECCEE
T ss_conf 9976773759998599999999899982999999995----79747882-89999999
No 44
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=80.12 E-value=0.5 Score=23.94 Aligned_cols=23 Identities=30% Similarity=0.557 Sum_probs=20.3
Q ss_pred CCEEEEEECCCCHHHHHHHHHHH
Q ss_conf 20235530477406799999999
Q gi|254780799|r 454 MPHLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 454 MPHLLIAGtTGSGKSV~iN~iI~ 476 (806)
.||+|..|.+|.||+-..+++--
T Consensus 35 ~~~~Ll~GPpG~GKTtla~~la~ 57 (239)
T d1ixsb2 35 LEHLLLFGPPGLGKTTLAHVIAH 57 (239)
T ss_dssp CCCEEEECCTTSCHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHH
T ss_conf 87389889799878889999999
No 45
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=79.74 E-value=0.85 Score=22.19 Aligned_cols=43 Identities=14% Similarity=0.244 Sum_probs=19.6
Q ss_pred CEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCC
Q ss_conf 86877634468888732100588999999866414237999965777
Q gi|254780799|r 590 PYIVVVIDEMADLMMVARKDIESAVQRLAQMARASGIHVIMATQRPS 636 (806)
Q Consensus 590 p~ivviiDElaDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPs 636 (806)
+...+.+||..-.+ -++..+..+..+.+. +-....|+.|.+|.
T Consensus 246 ~~~~~~ide~e~~L--~~~~~~~l~~~l~~~--~~~~Q~iitTh~~~ 288 (329)
T g1xew.1 246 PAPFYLFDEIDAHL--DDANVKRVADLIKES--SKESQFIVITLRDV 288 (329)
T ss_dssp CCSEEEEESTTTTS--CHHHHHHHHHHHHHH--TTTSEEEEECCCHH
T ss_pred CCCHHHHHHHHHHC--CHHHHHHHHHHHHHH--CCCCEEEEEECCHH
T ss_conf 65124455577622--798999999999985--63780799968889
No 46
>d1sfxa_ a.4.5.50 (A:) Hypothetical protein AF2008 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=79.17 E-value=1.2 Score=21.17 Aligned_cols=57 Identities=11% Similarity=0.091 Sum_probs=43.8
Q ss_pred HHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHH---HCCCCCEEEECH
Q ss_conf 999999996598500014222001177899999999977986802---278872673171
Q gi|254780799|r 744 KQAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGPA---SSTGKREILISS 800 (806)
Q Consensus 744 ~~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~---~g~~~r~vl~~~ 800 (806)
-.+...+.+.+.+|.+-|.+++.+--....++++.||++|+|--. ++.+++.+...+
T Consensus 23 ~~v~~~L~~~g~~t~~eia~~~~i~~~~v~~~l~~L~~~GlV~r~~~~~~~r~~~~~a~~ 82 (109)
T d1sfxa_ 23 VRIYSLLLERGGMRVSEIARELDLSARFVRDRLKVLLKRGFVRREIVEKGWVGYIYSAEK 82 (109)
T ss_dssp HHHHHHHHHHCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEEESSSEEEEEEECC
T ss_pred HHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC
T ss_conf 999999882389989999998579835599999999959987988505788502225888
No 47
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=78.71 E-value=1.8 Score=19.83 Aligned_cols=11 Identities=18% Similarity=0.308 Sum_probs=4.6
Q ss_pred HHHHHHHCCCC
Q ss_conf 99997424863
Q gi|254780799|r 339 LKSVLSDFGIQ 349 (806)
Q Consensus 339 LE~tL~dFGVe 349 (806)
+++.|...||.
T Consensus 364 l~~~L~~~~ip 374 (623)
T g1qhh.1 364 MEEMLLKANIP 374 (623)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHCCCC
T ss_conf 99999977999
No 48
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=78.55 E-value=0.68 Score=22.93 Aligned_cols=23 Identities=26% Similarity=0.634 Sum_probs=19.7
Q ss_pred EEEEEECCCCHHHHHHHHHHHHH
Q ss_conf 23553047740679999999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSL 478 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~Sl 478 (806)
|++|-|-.|||||--+++|+--+
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l 24 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERL 24 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHCC
T ss_conf 89999899938999999998148
No 49
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=78.43 E-value=0.8 Score=22.39 Aligned_cols=39 Identities=26% Similarity=0.406 Sum_probs=31.1
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCC
Q ss_conf 02355304774067999999999998299578478885231
Q gi|254780799|r 455 PHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPK 495 (806)
Q Consensus 455 PHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK 495 (806)
+-+=|.|.-|+|||-.|+.++.-+ +.....|-.|-+||-
T Consensus 52 ~~igitG~pGaGKSTli~~l~~~~--~~~g~~vaViavDps 90 (323)
T d2qm8a1 52 IRVGITGVPGVGKSTTIDALGSLL--TAAGHKVAVLAVDPS 90 (323)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHH--HHTTCCEEEEEECGG
T ss_pred EEEEEECCCCCCHHHHHHHHHHHH--HHCCCCEEEEECCCC
T ss_conf 598611799888999999999987--636875134434655
No 50
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=78.32 E-value=1.8 Score=19.75 Aligned_cols=44 Identities=18% Similarity=0.278 Sum_probs=29.1
Q ss_pred EEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCC
Q ss_conf 6877634468888732100588999999866414237999965777
Q gi|254780799|r 591 YIVVVIDEMADLMMVARKDIESAVQRLAQMARASGIHVIMATQRPS 636 (806)
Q Consensus 591 ~ivviiDElaDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPs 636 (806)
-+++++||+-.+.-...+++...+..+.+.. ..++.|+++-+.+
T Consensus 137 ~~~i~id~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~i~~~~~~~ 180 (283)
T d2fnaa2 137 NVIIVLDEAQELVKLRGVNLLPALAYAYDNL--KRIKFIMSGSEMG 180 (283)
T ss_dssp CEEEEEETGGGGGGCTTCCCHHHHHHHHHHC--TTEEEEEEESSHH
T ss_pred CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH--HHHHHHHCCCCCH
T ss_conf 5545664055413332699999999998753--1134420356506
No 51
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=78.23 E-value=0.73 Score=22.68 Aligned_cols=20 Identities=35% Similarity=0.627 Sum_probs=18.0
Q ss_pred EEEEEECCCCHHHHHHHHHH
Q ss_conf 23553047740679999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI 475 (806)
+.++.|.+|+|||-.+|+++
T Consensus 3 kI~lvG~~nvGKSsLin~l~ 22 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALA 22 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
T ss_conf 99998999998999999996
No 52
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=78.21 E-value=1.8 Score=19.73 Aligned_cols=39 Identities=28% Similarity=0.356 Sum_probs=26.0
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHH--CCHHHEEEEEECC
Q ss_conf 23553047740679999999999982--9957847888523
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYR--MTPAQCRLIMIDP 494 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk--~~P~evkliliDP 494 (806)
|+||.|.=||||+.-+=.-|.-||+. ..|+.+-++.--.
T Consensus 26 ~~lV~g~aGSGKTt~l~~ri~~ll~~~~~~p~~il~lt~t~ 66 (318)
T d1pjra1 26 PLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTN 66 (318)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEECCH
T ss_conf 98999529866899999999999980899878937576649
No 53
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=78.09 E-value=1.8 Score=19.70 Aligned_cols=43 Identities=16% Similarity=0.322 Sum_probs=33.0
Q ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHCCC
Q ss_conf 202355304774067999999999998299578478885231001110277
Q gi|254780799|r 454 MPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKMLELSVYDG 504 (806)
Q Consensus 454 MPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~vEls~Y~~ 504 (806)
..++|.-|..|+|||--++++--.+ .+.++-|++-.+. +.|-|
T Consensus 45 ~~~iLL~GppGtGKT~la~~iA~~~-------~~~~~~i~~~~l~-~~~~g 87 (256)
T d1lv7a_ 45 PKGVLMVGPPGTGKTLLAKAIAGEA-------KVPFFTISGSDFV-EMFVG 87 (256)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHH-------TCCEEEECSCSST-TSCCC
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHC-------CCCEEEEEHHHHH-HCCHH
T ss_conf 8867866899888228999999982-------9987998869942-60010
No 54
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=78.06 E-value=0.72 Score=22.74 Aligned_cols=23 Identities=30% Similarity=0.576 Sum_probs=20.9
Q ss_pred CCEEEEEECCCCHHHHHHHHHHH
Q ss_conf 20235530477406799999999
Q gi|254780799|r 454 MPHLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 454 MPHLLIAGtTGSGKSV~iN~iI~ 476 (806)
=|..++.|-+|+|||--+|.+.-
T Consensus 3 ~p~V~lvG~~n~GKTSLln~l~~ 25 (209)
T d1nrjb_ 3 QPSIIIAGPQNSGKTSLLTLLTT 25 (209)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHC
T ss_conf 88999999999889999999967
No 55
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=77.59 E-value=1.9 Score=19.60 Aligned_cols=162 Identities=16% Similarity=0.191 Sum_probs=84.4
Q ss_pred CCEE-EEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHH----HHHHCCCCHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf 2023-5530477406799999999999829957847888523100----1110277034312233430456689999999
Q gi|254780799|r 454 MPHL-LIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKML----ELSVYDGIPNLLTPVVTNPQKAVTVLKWLVC 528 (806)
Q Consensus 454 MPHL-LIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~v----Els~Y~~iPHLl~pVvTd~~kA~~aL~w~V~ 528 (806)
-||. +..|-||+||+-.+-=+ ... |+..-..|-+|=.|.-|. -|..|-.+=-+=.-++.++.+...+|+-+..
T Consensus 8 ~p~vi~lvGptGvGKTTTiAKL-A~~-~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~d~~~~l~~~~~ 85 (211)
T d2qy9a2 8 APFVILMVGVNGVGKTTTIGKL-ARQ-FEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQ 85 (211)
T ss_dssp TTEEEEEECCTTSCHHHHHHHH-HHH-HHTTTCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHH-HHH-HHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 9979999899999989999999-999-99779947998232136661204555434338862113568779999999999
Q ss_pred HHHH-HHH--HHHHCCCCCH--HHHHH--HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-EEEEEHHHHH
Q ss_conf 9999-999--9987089968--99999--9998874478667754467765454322233223234698-6877634468
Q gi|254780799|r 529 EMEE-RYQ--KMSKIGVRNI--DGFNL--KVAQYHNTGKKFNRTVQTGFDRKTGEAIYETEHFDFQHMP-YIVVVIDEMA 600 (806)
Q Consensus 529 EMe~-RY~--l~a~~~vRni--~~yN~--k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp-~ivviiDEla 600 (806)
.... .|+ +.-.+|.-.. ...++ ++.+.... .+.. .| .++.|+|
T Consensus 86 ~a~~~~~d~ilIDTaGr~~~d~~~~~el~~l~~~~~~-----------~~~~---------------~p~~~~LVl~--- 136 (211)
T d2qy9a2 86 AAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKK-----------LDVE---------------APHEVMLTID--- 136 (211)
T ss_dssp HHHHTTCSEEEECCCCCGGGHHHHHHHHHHHHHHHTT-----------TCTT---------------CCSEEEEEEE---
T ss_pred HHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHH-----------HCCC---------------CCCEEEEEHH---
T ss_conf 9987699889965688763207789999999999853-----------0466---------------8600122001---
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHH----HHHCCCCEEEE
Q ss_conf 8887321005889999998664142379999657775355435----54110251587
Q gi|254780799|r 601 DLMMVARKDIESAVQRLAQMARASGIHVIMATQRPSVDVITGT----IKANFPTRISF 654 (806)
Q Consensus 601 Dlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~----ikan~p~riaf 654 (806)
.++...+ +...++--++.||+=++-|--=+..-.-++ ++.+.| |+|
T Consensus 137 --a~~~~~~----~~~~~~~~~~~~~~~lIlTKlDe~~~~G~~l~~~~~~~~P--i~~ 186 (211)
T d2qy9a2 137 --ASTGQNA----VSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIP--IRY 186 (211)
T ss_dssp --GGGTHHH----HHHHHHHHHHSCCCEEEEECCTTCTTTTHHHHHHHHHCCC--EEE
T ss_pred --CCCCCCH----HHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCC--EEE
T ss_conf --2357633----7787644210178648996127888720999999998979--799
No 56
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.49 E-value=0.71 Score=22.79 Aligned_cols=24 Identities=38% Similarity=0.624 Sum_probs=17.2
Q ss_pred CEEE-EEECCCCHHHHHHHHHHHHH
Q ss_conf 0235-53047740679999999999
Q gi|254780799|r 455 PHLL-IAGTTGSGKSVAINTMILSL 478 (806)
Q Consensus 455 PHLL-IAGtTGSGKSV~iN~iI~Sl 478 (806)
|-+. |+|.+|||||-.-|.+.-.|
T Consensus 2 P~iIgI~G~~gSGKSTla~~L~~~l 26 (213)
T d1uj2a_ 2 PFLIGVSGGTASGKSSVCAKIVQLL 26 (213)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 9899998999787999999999996
No 57
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=77.32 E-value=1.8 Score=19.70 Aligned_cols=40 Identities=13% Similarity=0.160 Sum_probs=22.6
Q ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCC
Q ss_conf 202355304774067999999999998299578478885231
Q gi|254780799|r 454 MPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPK 495 (806)
Q Consensus 454 MPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK 495 (806)
..+-+++-+||||||+.+= +|+..+....+. =-|+++..+
T Consensus 128 ~~~~il~~pTGsGKT~i~~-~i~~~~~~~~~~-k~Liivp~~ 167 (282)
T d1rifa_ 128 NRRRILNLPTSAGRSLIQA-LLARYYLENYEG-KILIIVPTT 167 (282)
T ss_dssp HSEEEECCCTTSCHHHHHH-HHHHHHHHHCSS-EEEEECSSH
T ss_pred CCCCEEEEECCCCCCHHHH-HHHHHHHHCCCC-EEEEEECCC
T ss_conf 4972168871158307889-999986532563-289997672
No 58
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=77.31 E-value=1 Score=21.60 Aligned_cols=30 Identities=27% Similarity=0.359 Sum_probs=16.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 334304566899999999999999998708
Q gi|254780799|r 512 VVTNPQKAVTVLKWLVCEMEERYQKMSKIG 541 (806)
Q Consensus 512 VvTd~~kA~~aL~w~V~EMe~RY~l~a~~~ 541 (806)
.||++..-..|++-.-+|++.|.+.|...|
T Consensus 248 ~i~~~~~~~~a~~~i~~el~~~~~~~~~~~ 277 (413)
T d1t5la1 248 FVTREEKMRLAIQNIEQELEERLAELRAQG 277 (413)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EECCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 626999999999999999999999998778
No 59
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]}
Probab=77.23 E-value=0.33 Score=25.27 Aligned_cols=117 Identities=26% Similarity=0.242 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHH
Q ss_conf 68999999999999999987089968999999998874-47866775446776545432223322323469868776344
Q gi|254780799|r 520 VTVLKWLVCEMEERYQKMSKIGVRNIDGFNLKVAQYHN-TGKKFNRTVQTGFDRKTGEAIYETEHFDFQHMPYIVVVIDE 598 (806)
Q Consensus 520 ~~aL~w~V~EMe~RY~l~a~~~vRni~~yN~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~ivviiDE 598 (806)
...|+|++ +..-+..+-.-||+=+.-.+ +++... .|.. -.+.. ..| ....++.+.- |-+
T Consensus 95 ~~di~~a~---~~~vD~ialSFVrs~~Dv~~-ir~~l~~~~~~--~~iia---------KIE-~~~al~nlde----I~~ 154 (258)
T d1pkla2 95 RVDLQFGV---EQGVDMIFASFIRSAEQVGD-VRKALGPKGRD--IMIIC---------KIE-NHQGVQNIDS----IIE 154 (258)
T ss_dssp HHHHHHHH---HHTCSEEEETTCCSHHHHHH-HHHHHCGGGTT--SEEEE---------EEC-SHHHHHTHHH----HHH
T ss_pred HHHHHHHH---HCCCCEEEEECCCCHHHHHH-HHHHHHHCCCC--CCEEE---------EEC-CCHHHHHHHH----HHH
T ss_conf 99999887---54998578737898999999-99999973898--73599---------965-7354431066----776
Q ss_pred HHHHHHHCCCH---------HHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCE-----EEEEECCCCC
Q ss_conf 68888732100---------588999999866414237999965777535543554110251-----5876458664
Q gi|254780799|r 599 MADLMMVARKD---------IESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKANFPTR-----ISFQVSSKID 661 (806)
Q Consensus 599 laDlmm~~~~~---------ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ikan~p~r-----iaf~v~s~~d 661 (806)
.+|-.|+|..| |=..-.++-+++|.+|.-.|+||| +.-.+++.+.||| ||++|-.++|
T Consensus 155 ~sDgImIaRGDLg~ei~~e~vp~~Qk~Ii~~~~~~~kpvivATq-----~LeSM~~~~~PTRAEv~Dvanav~dG~D 226 (258)
T d1pkla2 155 ESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQ-----MLESMTYNPRPTRAEVSDVANAVFNGAD 226 (258)
T ss_dssp HSSEEEECHHHHTTTSCHHHHHHHHHHHHHHHHHHTCCEEECSS-----SSGGGGTSSSCCHHHHHHHHHHHHHTCS
T ss_pred HCCEEEEECHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEC-----EEHHHCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 27745674335665346545466789999999973998799711-----1075446999988999999999994897
No 60
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=76.47 E-value=0.71 Score=22.77 Aligned_cols=43 Identities=12% Similarity=0.305 Sum_probs=23.0
Q ss_pred CCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCC
Q ss_conf 986877634468888732100588999999866414237999965777
Q gi|254780799|r 589 MPYIVVVIDEMADLMMVARKDIESAVQRLAQMARASGIHVIMATQRPS 636 (806)
Q Consensus 589 lp~ivviiDElaDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPs 636 (806)
.| ++++||.-.=| -+.-.+..+..|.+++ -.+.++|+.|..|.
T Consensus 355 ~p--ililDE~d~~L--d~~~~~~~~~~l~~~~-~~~~Q~I~iTH~~~ 397 (427)
T d1w1wa_ 355 SP--FFVLDEVDAAL--DITNVQRIAAYIRRHR-NPDLQFIVISLKNT 397 (427)
T ss_dssp CS--EEEESSTTTTC--CHHHHHHHHHHHHHHC-BTTBEEEEECSCHH
T ss_pred CC--EEEEECCCCCC--CHHHHHHHHHHHHHHH-CCCCEEEEEECCHH
T ss_conf 97--79996887778--9999999999999972-89988999958789
No 61
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=76.17 E-value=1.4 Score=20.56 Aligned_cols=109 Identities=24% Similarity=0.246 Sum_probs=59.7
Q ss_pred HHHCCCCCHHHCCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHH--HEEEEEECCCHHHHHHCCC
Q ss_conf 43022100021045666666785410020235530477406799999999999829957--8478885231001110277
Q gi|254780799|r 427 FEKNQCDLAINLGKSIEGKPIIADLARMPHLLIAGTTGSGKSVAINTMILSLLYRMTPA--QCRLIMIDPKMLELSVYDG 504 (806)
Q Consensus 427 f~~s~~~L~iaLGKdI~G~pvv~DLakMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~--evkliliDPK~vEls~Y~~ 504 (806)
.++-.....-.||+.-...|++. -|||..|||||..-+.+- .+.+..+. .|-+|=.|- -|
T Consensus 61 ~~~~~~~~~~fl~~~~~k~P~iI--------GIaG~sgSGKSTla~~L~--~lL~~~~~~~~v~~Is~D~------F~-- 122 (308)
T d1sq5a_ 61 NLRRQAVLEQFLGTNGQRIPYII--------SIAGSVAVGKSTTARVLQ--ALLSRWPEHRRVELITTDG------FL-- 122 (308)
T ss_dssp HHHHHHHHHHHHTCC-CCCCEEE--------EEEECTTSSHHHHHHHHH--HHHTTSTTCCCEEEEEGGG------GB--
T ss_pred HHHHHHHHHHHHCCCCCCCCEEE--------EEECCCCCCCCHHHHHHH--HHHHHHCCCCCEEEEEEEE------EE--
T ss_conf 99999999998534478998899--------996899998768999999--9973046899659995215------68--
Q ss_pred CHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC---CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0343122334304566899999999999999998708---996899999999887447866775446776545432
Q gi|254780799|r 505 IPNLLTPVVTNPQKAVTVLKWLVCEMEERYQKMSKIG---VRNIDGFNLKVAQYHNTGKKFNRTVQTGFDRKTGEA 577 (806)
Q Consensus 505 iPHLl~pVvTd~~kA~~aL~w~V~EMe~RY~l~a~~~---vRni~~yN~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (806)
+ | .+ -| .+ ..++...| .-|++.+.+.+...+..++.+.-|+ ||..+.+.
T Consensus 123 ---~--~------~~--~l----~~----~~~~~~~g~Pes~D~~~L~~~L~~lk~g~~~v~~P~---yd~~~~d~ 174 (308)
T d1sq5a_ 123 ---H--P------NQ--VL----KE----RGLMKKKGFPESYDMHRLVKFVSDLKSGVPNVTAPV---YSHLIYDV 174 (308)
T ss_dssp ---C--C------HH--HH----HH----HTCTTCTTSGGGBCHHHHHHHHHHHTTTCSCEEECC---EETTTTEE
T ss_pred ---C--C------CH--HH----HH----HCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEC---CCHHHCCC
T ss_conf ---9--8------45--88----88----368766881676319999999999975998642105---30010255
No 62
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=75.80 E-value=0.52 Score=23.80 Aligned_cols=23 Identities=26% Similarity=0.290 Sum_probs=17.0
Q ss_pred EEEEEECCCCHHHHHHHHHHHHH
Q ss_conf 23553047740679999999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSL 478 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~Sl 478 (806)
|+++..-|||||+.|----++..
T Consensus 40 dvii~a~TGSGKTlayllp~l~~ 62 (209)
T d1q0ua_ 40 SMVGQSQTGTGKTHAYLLPIMEK 62 (209)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCEEEEEEECCC
T ss_conf 76866244421331444310012
No 63
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=75.65 E-value=1.1 Score=21.33 Aligned_cols=42 Identities=31% Similarity=0.352 Sum_probs=23.5
Q ss_pred CEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCC
Q ss_conf 8687763446888873210058899999986641423799996577
Q gi|254780799|r 590 PYIVVVIDEMADLMMVARKDIESAVQRLAQMARASGIHVIMATQRP 635 (806)
Q Consensus 590 p~ivviiDElaDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrP 635 (806)
.|=+|||||.=.+ .+... ..-.-+.+..+.-..|+|+.|=.|
T Consensus 98 ~~~lvIiDEaH~~---~~~~~-~~~~~~~~~~~~~~~~~l~lTATP 139 (140)
T d1yksa1 98 NWEVIIMDEAHFL---DPASI-AARGWAAHRARANESATILMTATP 139 (140)
T ss_dssp CCSEEEETTTTCC---SHHHH-HHHHHHHHHHHTTSCEEEEECSSC
T ss_pred CEEEEEECCCCCC---CHHHH-HHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 4208997543346---75439-999999998257999989998299
No 64
>d2bv6a1 a.4.5.28 (A:5-140) Transcriptional regulator MgrA {Staphylococcus aureus [TaxId: 1280]}
Probab=75.60 E-value=0.83 Score=22.26 Aligned_cols=55 Identities=16% Similarity=0.361 Sum_probs=31.6
Q ss_pred HHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHH-HCCCCCEEEEC
Q ss_conf 99999996598500014222001177899999999977986802-27887267317
Q gi|254780799|r 745 QAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGPA-SSTGKREILIS 799 (806)
Q Consensus 745 ~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~-~g~~~r~vl~~ 799 (806)
.++..+...+-.|.|-|.+++.+--+-..|+++.||++|.|-.. +....|.+.+.
T Consensus 38 ~vL~~i~~~~~~t~~~la~~l~~~~~~~s~~l~~L~~~Gli~r~~~~~D~R~~~l~ 93 (136)
T d2bv6a1 38 LVLTILWDESPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERSEVDQREVFIH 93 (136)
T ss_dssp HHHHHHHHSSEEEHHHHHHHTTCCTTTHHHHHHHHHHTTSEEEEECSSSTTCEEEE
T ss_pred HHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHC
T ss_conf 99999972899799999999797883799999999978987974347766403211
No 65
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=75.55 E-value=1.1 Score=21.46 Aligned_cols=25 Identities=32% Similarity=0.589 Sum_probs=21.2
Q ss_pred CCEEEEEECCCCHHHHHHHHHHHHH
Q ss_conf 2023553047740679999999999
Q gi|254780799|r 454 MPHLLIAGTTGSGKSVAINTMILSL 478 (806)
Q Consensus 454 MPHLLIAGtTGSGKSV~iN~iI~Sl 478 (806)
.||+|+.|-.|+||+-..+.+.--+
T Consensus 35 ~~~~L~~GPpGtGKT~lA~~la~~~ 59 (238)
T d1in4a2 35 LDHVLLAGPPGLGKTTLAHIIASEL 59 (238)
T ss_dssp CCCEEEESSTTSSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 7748987999973889999998503
No 66
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=75.51 E-value=0.86 Score=22.16 Aligned_cols=21 Identities=29% Similarity=0.520 Sum_probs=18.1
Q ss_pred CEEEEEECCCCHHHHHHHHHH
Q ss_conf 023553047740679999999
Q gi|254780799|r 455 PHLLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 455 PHLLIAGtTGSGKSV~iN~iI 475 (806)
+-..+.|.+|+|||--||++.
T Consensus 6 ~~I~lvG~~~~GKSSLin~l~ 26 (178)
T d1wf3a1 6 GFVAIVGKPNVGKSTLLNNLL 26 (178)
T ss_dssp EEEEEECSTTSSHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHH
T ss_conf 699999999999999999996
No 67
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=75.50 E-value=1.1 Score=21.40 Aligned_cols=42 Identities=21% Similarity=0.296 Sum_probs=22.4
Q ss_pred CEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHH-HCCEEEEEEECCC
Q ss_conf 868776344688887321005889999998664-1423799996577
Q gi|254780799|r 590 PYIVVVIDEMADLMMVARKDIESAVQRLAQMAR-ASGIHVIMATQRP 635 (806)
Q Consensus 590 p~ivviiDElaDlmm~~~~~ve~~i~rlaq~ar-a~GiHli~aTqrP 635 (806)
.|=+|||||.--+ +.+-...+.++-+.++ +--++++.+|=.|
T Consensus 94 ~~~~vIiDE~H~~----~~~~~~~~~~~l~~~~~~~~~~~l~~TATP 136 (136)
T d1a1va1 94 AYDIIICDECHST----DATSILGIGTVLDQAETAGARLVVLATATP 136 (136)
T ss_dssp CCSEEEEETTTCC----SHHHHHHHHHHHHHTTTTTCSEEEEEESSC
T ss_pred CCCEEEEECCCCC----CHHHHHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 5999998255535----887899999999999877997299992799
No 68
>d1jgsa_ a.4.5.28 (A:) Multiple antibiotic resistance repressor, MarR {Escherichia coli [TaxId: 562]}
Probab=75.36 E-value=1.5 Score=20.36 Aligned_cols=55 Identities=11% Similarity=0.209 Sum_probs=35.6
Q ss_pred HHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCH-HHCCCCCEEEEC
Q ss_conf 9999999659850001422200117789999999997798680-227887267317
Q gi|254780799|r 745 QAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGP-ASSTGKREILIS 799 (806)
Q Consensus 745 ~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~-~~g~~~r~vl~~ 799 (806)
.+..++-..+..|.|-|-+++.+--+-+.|+++.||++|+|-- ++....|.+.+.
T Consensus 38 ~vL~~l~~~~~~t~~ela~~~~i~~~~vs~~v~~L~~~glv~r~~~~~D~R~~~i~ 93 (138)
T d1jgsa_ 38 KVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVK 93 (138)
T ss_dssp HHHHHHHHHSSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECTTCSSCEEEE
T ss_pred HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEE
T ss_conf 99886871809899999999787885799999987307877986316888736989
No 69
>d1s3ja_ a.4.5.28 (A:) Putative transcriptional regulator YusO {Bacillus subtilis [TaxId: 1423]}
Probab=75.30 E-value=1.4 Score=20.48 Aligned_cols=58 Identities=16% Similarity=0.261 Sum_probs=45.0
Q ss_pred HHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHHH-CCCCCEEEECHHH
Q ss_conf 999999965985000142220011778999999999779868022-7887267317125
Q gi|254780799|r 745 QAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGPAS-STGKREILISSME 802 (806)
Q Consensus 745 ~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~~-g~~~r~vl~~~~~ 802 (806)
.+...+...+..|.+-|-+++.+--..+.|+++.||++|+|-... ..-.|.+++.-.+
T Consensus 39 ~iL~~l~~~~~~t~~~la~~~~i~~~~vs~~l~~L~~~glv~r~~~~~D~R~~~v~lT~ 97 (143)
T d1s3ja_ 39 FVLASLKKHGSLKVSEIAERMEVKPSAVTLMADRLEQKNLIARTHNTKDRRVIDLSLTD 97 (143)
T ss_dssp HHHHHHHHHSEEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECH
T ss_pred HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEECH
T ss_conf 99999997799899999999896988999999999973400131013788713778898
No 70
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=75.29 E-value=0.92 Score=21.92 Aligned_cols=19 Identities=32% Similarity=0.557 Sum_probs=17.1
Q ss_pred EEEEECCCCHHHHHHHHHH
Q ss_conf 3553047740679999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI 475 (806)
.++.|.||+|||--+|++.
T Consensus 3 I~lvG~~nvGKSsLin~l~ 21 (184)
T d2cxxa1 3 IIFAGRSNVGKSTLIYRLT 21 (184)
T ss_dssp EEEEEBTTSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
T ss_conf 9999999988999999996
No 71
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=75.26 E-value=1.1 Score=21.48 Aligned_cols=48 Identities=27% Similarity=0.365 Sum_probs=25.3
Q ss_pred CCCHHHCCCC--CCCCEEEEECCCC-C-EEEEEECCCCHHH-HHHHHHHHHHH
Q ss_conf 1000210456--6666678541002-0-2355304774067-99999999999
Q gi|254780799|r 432 CDLAINLGKS--IEGKPIIADLARM-P-HLLIAGTTGSGKS-VAINTMILSLL 479 (806)
Q Consensus 432 ~~L~iaLGKd--I~G~pvv~DLakM-P-HLLIAGtTGSGKS-V~iN~iI~SlL 479 (806)
+.||+-|=+| -+-+-+..|+.+- | +-|+-|-|||||. |++.+|...+-
T Consensus 78 ~~LPFeLT~~Q~~ai~ei~~d~~~~~~m~rLL~GdvGSGKT~Va~~a~~~~~~ 130 (264)
T d1gm5a3 78 KSLPFKLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYE 130 (264)
T ss_dssp HHSSSCCCHHHHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
T ss_conf 40046678037888999998762367531566635355665999999999885
No 72
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=75.13 E-value=1.4 Score=20.55 Aligned_cols=26 Identities=27% Similarity=0.368 Sum_probs=19.2
Q ss_pred EECCCCCEEEEEECCCCHHHHHHHHH
Q ss_conf 54100202355304774067999999
Q gi|254780799|r 449 ADLARMPHLLIAGTTGSGKSVAINTM 474 (806)
Q Consensus 449 ~DLakMPHLLIAGtTGSGKSV~iN~i 474 (806)
.++.+==.+-|.|.+|||||-.++.|
T Consensus 24 l~i~~Ge~vaIvG~sGsGKSTLl~ll 49 (241)
T d2pmka1 24 LSIKQGEVIGIVGRSGSGKSTLTKLI 49 (241)
T ss_dssp EEEETTCEEEEECSTTSSHHHHHHHH
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHH
T ss_conf 99849999999999999899999999
No 73
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=75.02 E-value=0.88 Score=22.07 Aligned_cols=25 Identities=16% Similarity=0.101 Sum_probs=21.7
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 0235530477406799999999999
Q gi|254780799|r 455 PHLLIAGTTGSGKSVAINTMILSLL 479 (806)
Q Consensus 455 PHLLIAGtTGSGKSV~iN~iI~SlL 479 (806)
+|+++.|-+|+||+..++++.-.|-
T Consensus 47 ~~l~l~GppGtGKT~l~~~l~~~l~ 71 (287)
T d1w5sa2 47 MIYGSIGRVGIGKTTLAKFTVKRVS 71 (287)
T ss_dssp EEEECTTCCSSSHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 4899678999899999999999987
No 74
>d3ctaa1 a.4.5.28 (A:5-89) Ta1064 (RFK), N-terminal domain {Thermoplasma acidophilum [TaxId: 2303]}
Probab=74.69 E-value=2.2 Score=19.06 Aligned_cols=58 Identities=21% Similarity=0.260 Sum_probs=40.2
Q ss_pred HHHHHHHHC------CCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCCEEEECHHH
Q ss_conf 999999965------9850001422200117789999999997798680227887267317125
Q gi|254780799|r 745 QAVDIVLRD------NKASISYIQRRLGIGYNRAASIIENMEEKGVIGPASSTGKREILISSME 802 (806)
Q Consensus 745 ~a~~~v~~~------~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~~g~~~r~vl~~~~~ 802 (806)
.++.-+.+. +..|.+-|-+++.+-=+...|+++.||++|+|.-+.-.+.+-+-+++..
T Consensus 5 ~~l~~l~~~~~~~~~~~lt~~eLa~~l~i~~~~vs~~l~~Le~~GlV~r~~D~R~~~i~LT~~G 68 (85)
T d3ctaa1 5 RAIKKIKEAAEASNRAYLTSSKLADMLGISQQSASRIIIDLEKNGYITRTVTKRGQILNITEKG 68 (85)
T ss_dssp HHHHHHHHHTTTSSEEECCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEEETTEEEEEECHHH
T ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEECHHH
T ss_conf 9999999826015899988999999988788789999999998798043124554300078999
No 75
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=74.67 E-value=1 Score=21.53 Aligned_cols=24 Identities=29% Similarity=0.368 Sum_probs=20.0
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf 355304774067999999999998
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLLY 480 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlLy 480 (806)
.+|+|.+|+|||.....++..++-
T Consensus 37 ~~i~G~~G~GKT~~~l~~a~~~~~ 60 (258)
T d2i1qa2 37 TEFAGVFGSGKTQIMHQSCVNLQN 60 (258)
T ss_dssp EEEEESTTSSHHHHHHHHHHHTTC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 999917999989999999999985
No 76
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=74.08 E-value=1.4 Score=20.47 Aligned_cols=21 Identities=19% Similarity=0.558 Sum_probs=14.2
Q ss_pred EEEHHHHHHHHHHCCCHHHHHH
Q ss_conf 7763446888873210058899
Q gi|254780799|r 593 VVVIDEMADLMMVARKDIESAV 614 (806)
Q Consensus 593 vviiDElaDlmm~~~~~ve~~i 614 (806)
.||||| +|.|+-.++.++...
T Consensus 165 ~vVvDE-~d~~l~~~~~~~~~~ 185 (237)
T d1gkub1 165 FIFVDD-VDAILKASKNVDKLL 185 (237)
T ss_dssp EEEESC-HHHHHTSTHHHHHHH
T ss_pred EEEEEC-HHHHHHCCCCHHHHH
T ss_conf 899999-266643342145788
No 77
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=74.05 E-value=0.55 Score=23.61 Aligned_cols=124 Identities=21% Similarity=0.272 Sum_probs=67.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 23343045668999999999999999987089968999999998874-47866775446776545432223322323469
Q gi|254780799|r 511 PVVTNPQKAVTVLKWLVCEMEERYQKMSKIGVRNIDGFNLKVAQYHN-TGKKFNRTVQTGFDRKTGEAIYETEHFDFQHM 589 (806)
Q Consensus 511 pVvTd~~kA~~aL~w~V~EMe~RY~l~a~~~vRni~~yN~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 589 (806)
|.+|+ |-...++|++ +.--+..+-.-||+-++-.+ +++... .+... .+.. ..| ....++.+
T Consensus 88 p~lte--kD~~di~~a~---~~~vD~ialSFVrs~~Di~~-~r~~l~~~~~~~--~Iia---------KIE-~~~al~Nl 149 (265)
T d1a3xa2 88 PALSE--KDKEDLRFGV---KNGVHMVFASFIRTANDVLT-IREVLGEQGKDV--KIIV---------KIE-NQQGVNNF 149 (265)
T ss_dssp CSSCH--HHHHHHHHHH---HTTCCEECCTTCCSHHHHHH-HHHHHCGGGTTS--CCEE---------EEC-SHHHHTTH
T ss_pred HHCCC--CHHHHHHHHH---HCCCCEEEECCCCCHHHHHH-HHHHHHHHCCCC--EEEE---------ECC-CHHHHHCH
T ss_conf 11024--4499999865---42651675256798899999-999998735797--0776---------315-36777575
Q ss_pred CEEEEEHHHHHHHHHHCCCH---------HHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCE-----EEEE
Q ss_conf 86877634468888732100---------588999999866414237999965777535543554110251-----5876
Q gi|254780799|r 590 PYIVVVIDEMADLMMVARKD---------IESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKANFPTR-----ISFQ 655 (806)
Q Consensus 590 p~ivviiDElaDlmm~~~~~---------ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ikan~p~r-----iaf~ 655 (806)
.-|+ +.+|-.|+|..| |=..--++-.+++.+|.-.|+||| +.-.+++...||| ||.+
T Consensus 150 deIi----~~sDgimIaRGDLgvei~~e~vp~~Qk~Ii~~~~~~gkpvivATq-----~LeSM~~~~~PTRAEv~Dvana 220 (265)
T d1a3xa2 150 DEIL----KVTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQ-----MLESMTYNPRPTRAEVSDVGNA 220 (265)
T ss_dssp HHHH----HHCSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESS-----SSGGGGTCSSCCHHHHHHHHHH
T ss_pred HHHH----HHCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEHHH-----HHHHHCCCCCCCHHHHHHHHHH
T ss_conf 8888----635515887243023224778889889999999971994885465-----3232135999868999999999
Q ss_pred ECCCCC
Q ss_conf 458664
Q gi|254780799|r 656 VSSKID 661 (806)
Q Consensus 656 v~s~~d 661 (806)
|-.++|
T Consensus 221 v~dG~D 226 (265)
T d1a3xa2 221 ILDGAD 226 (265)
T ss_dssp HHTTCS
T ss_pred HHHCCC
T ss_conf 993897
No 78
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=73.89 E-value=0.84 Score=22.24 Aligned_cols=22 Identities=23% Similarity=0.401 Sum_probs=18.9
Q ss_pred CCEEEEEECCCCHHHHHHHHHH
Q ss_conf 2023553047740679999999
Q gi|254780799|r 454 MPHLLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 454 MPHLLIAGtTGSGKSV~iN~iI 475 (806)
+|-..+.|.+++|||--+|++.
T Consensus 1 ~~~VaivG~~nvGKSTLin~L~ 22 (180)
T d1udxa2 1 IADVGLVGYPNAGKSSLLAAMT 22 (180)
T ss_dssp SCSEEEECCGGGCHHHHHHHHC
T ss_pred CCEEEEECCCCCCHHHHHHHHH
T ss_conf 9889998999998999999996
No 79
>d2etha1 a.4.5.28 (A:1-140) Putative transcriptional regulator TM0816 {Thermotoga maritima [TaxId: 2336]}
Probab=73.48 E-value=2 Score=19.44 Aligned_cols=58 Identities=14% Similarity=0.177 Sum_probs=46.8
Q ss_pred HHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCH-HHCCCCCEEEECHHH
Q ss_conf 9999999659850001422200117789999999997798680-227887267317125
Q gi|254780799|r 745 QAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGP-ASSTGKREILISSME 802 (806)
Q Consensus 745 ~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~-~~g~~~r~vl~~~~~ 802 (806)
.++..+-..+-.+.+-|-.++.+-.+-+.|+++.||++|+|-. .+....|.+++.-.+
T Consensus 36 ~iL~~l~~~~~~t~~~La~~l~i~~~~vs~~v~~L~~~gli~r~~~~~D~R~~~l~lT~ 94 (140)
T d2etha1 36 YAFLYVALFGPKKMKEIAEFLSTTKSNVTNVVDSLEKRGLVVREMDPVDRRTYRVVLTE 94 (140)
T ss_dssp HHHHHHHHHCCBCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEEEECTTTSSCEEEEECH
T ss_pred HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCH
T ss_conf 99999998699599999999896987999999999878896663133445325540389
No 80
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.89 E-value=1.3 Score=20.92 Aligned_cols=44 Identities=18% Similarity=0.329 Sum_probs=27.3
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCCHHH---------EEEEEECCCHHHHHHCC
Q ss_conf 2355304774067999999999998299578---------47888523100111027
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYRMTPAQ---------CRLIMIDPKMLELSVYD 503 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk~~P~e---------vkliliDPK~vEls~Y~ 503 (806)
-++|-|..|+|||--||.+ +...-+++ .+.+.++-+.+.|.+++
T Consensus 11 Ki~lvG~~~vGKTsLi~r~----~~~~f~~~~~~Ti~~~~~~~~~~~~~~~~l~i~D 63 (185)
T d2atxa1 11 KCVVVGDGAVGKTCLLMSY----ANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYD 63 (185)
T ss_dssp EEEEEECTTSSHHHHHHHH----HHSSCCCSCCCSSCCCEEEEEESSSCEEEEEEEC
T ss_pred EEEEECCCCCCHHHHHHHH----HHCCCCCCCCCCEEEEEEEEEEECCCEEEEECCC
T ss_conf 9999999998999999999----6499987677713432468985079558752046
No 81
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=72.38 E-value=2.5 Score=18.68 Aligned_cols=96 Identities=20% Similarity=0.235 Sum_probs=59.3
Q ss_pred HHHCCCCCHH-HCCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHCCCC
Q ss_conf 4302210002-104566666678541002023553047740679999999999982995784788852310011102770
Q gi|254780799|r 427 FEKNQCDLAI-NLGKSIEGKPIIADLARMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKMLELSVYDGI 505 (806)
Q Consensus 427 f~~s~~~L~i-aLGKdI~G~pvv~DLakMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~vEls~Y~~i 505 (806)
+++..|||-- .++++.-.+.+..|-.+ .-++|-|.-.||||+.+-++-+..++-..- .-|-=+.-++++|+.|
T Consensus 14 i~~~rHPlle~~~~~~~VpNdi~l~~~~-~~~iiTGpN~~GKSt~lk~i~l~~~laq~G-----~~VpA~~a~~~~~d~I 87 (234)
T d1wb9a2 14 ITEGRHPVVEQVLNEPFIANPLNLSPQR-RMLIITGPNMGGKSTYMRQTALIALMAYIG-----SYVPAQKVEIGPIDRI 87 (234)
T ss_dssp EEEECCTTHHHHCSSCCCCEEEEECSSS-CEEEEECCTTSSHHHHHHHHHHHHHHHTTT-----CCBSSSEEEECCCCEE
T ss_pred EEEEECCEEECCCCCCCCCEEEEECCCC-EEEEEECCCCHHHHHHHHHHHHHHHHHHCC-----CEEECCCEECCCCHHH
T ss_conf 9973787797446998264057988995-399995467313689999879999998729-----7674176661344202
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 343122334304566899999999999
Q gi|254780799|r 506 PNLLTPVVTNPQKAVTVLKWLVCEMEE 532 (806)
Q Consensus 506 PHLl~pVvTd~~kA~~aL~w~V~EMe~ 532 (806)
.+ .+-+.......+----.||.+
T Consensus 88 ---~~-~~~~~d~~~~~~S~F~~E~~~ 110 (234)
T d1wb9a2 88 ---FT-RVGAADDLASGRSTFMVEMTE 110 (234)
T ss_dssp ---EE-EEC-----------CHHHHHH
T ss_pred ---EE-EECCCCCCCCCHHHHHHHHHH
T ss_conf ---34-874675343653189999999
No 82
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=72.20 E-value=1.3 Score=20.81 Aligned_cols=21 Identities=19% Similarity=0.425 Sum_probs=18.1
Q ss_pred CEEEEEECCCCHHHHHHHHHH
Q ss_conf 023553047740679999999
Q gi|254780799|r 455 PHLLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 455 PHLLIAGtTGSGKSV~iN~iI 475 (806)
-+++|.|..|+|||--+|.+.
T Consensus 16 ~kI~vvG~~~~GKSsLi~rl~ 36 (177)
T d1zj6a1 16 HKVIIVGLDNAGKTTILYQFS 36 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHH
T ss_conf 799999999989899999996
No 83
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=71.52 E-value=0.99 Score=21.69 Aligned_cols=21 Identities=29% Similarity=0.445 Sum_probs=16.1
Q ss_pred EEEEEECCCCHHHHHHHHHHH
Q ss_conf 235530477406799999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~ 476 (806)
|+++..-|||||+.|--.-++
T Consensus 40 dvi~~a~tGsGKTlay~lp~i 60 (206)
T d1s2ma1 40 DILARAKNGTGKTAAFVIPTL 60 (206)
T ss_dssp CEEEECCTTSCHHHHHHHHHH
T ss_pred CEEEECCCCCHHHHHHCCCCC
T ss_conf 889865876214444303311
No 84
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=71.02 E-value=0.97 Score=21.74 Aligned_cols=25 Identities=24% Similarity=0.457 Sum_probs=18.7
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHC
Q ss_conf 0235530477406799999999999829
Q gi|254780799|r 455 PHLLIAGTTGSGKSVAINTMILSLLYRM 482 (806)
Q Consensus 455 PHLLIAGtTGSGKSV~iN~iI~SlLyk~ 482 (806)
.++++...|||||+.+. ++.++.+-
T Consensus 48 ~dvl~~a~TGsGKT~a~---~lp~i~~l 72 (212)
T d1qdea_ 48 HDVLAQAQSGTGKTGTF---SIAALQRI 72 (212)
T ss_dssp CCEEEECCTTSSHHHHH---HHHHHHHC
T ss_pred CCEEEECCCCCCHHHHH---HHHHHHHH
T ss_conf 98774456530100466---76667665
No 85
>d2a61a1 a.4.5.28 (A:5-143) Transcriptional regulator TM0710 {Thermotoga maritima [TaxId: 2336]}
Probab=70.90 E-value=1.9 Score=19.51 Aligned_cols=57 Identities=9% Similarity=0.227 Sum_probs=45.2
Q ss_pred HHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHC-CCCCEEEECH
Q ss_conf 99999999659850001422200117789999999997798680227-8872673171
Q gi|254780799|r 744 KQAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGPASS-TGKREILISS 800 (806)
Q Consensus 744 ~~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~~g-~~~r~vl~~~ 800 (806)
-.++..+...+..|.|-|-+++.+-.+-..|+++.||++|+|--..+ .-.|.+++.-
T Consensus 33 ~~iL~~i~~~~~~t~~~la~~l~i~~~tvs~~l~~L~~~gli~r~~~~~D~R~~~i~L 90 (139)
T d2a61a1 33 FDILQKIYFEGPKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVI 90 (139)
T ss_dssp HHHHHHHHHHCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEECCCCCCEEEEEE
T ss_conf 9999999976998999999983988144269999998457256632168888678898
No 86
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=70.87 E-value=1.5 Score=20.44 Aligned_cols=21 Identities=29% Similarity=0.472 Sum_probs=18.5
Q ss_pred EEEEEECCCCHHHHHHHHHHH
Q ss_conf 235530477406799999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~ 476 (806)
.+.|.|-+|+|||--+|+|.-
T Consensus 10 kV~iiG~~~~GKSTLin~l~~ 30 (186)
T d1mkya2 10 KVAIVGRPNVGKSTLFNAILN 30 (186)
T ss_dssp EEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 899999999999999999977
No 87
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=70.68 E-value=1.3 Score=20.77 Aligned_cols=19 Identities=37% Similarity=0.656 Sum_probs=17.2
Q ss_pred EEEEECCCCHHHHHHHHHH
Q ss_conf 3553047740679999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI 475 (806)
..|.|-+|+|||--+|.+.
T Consensus 3 V~liG~~n~GKSsLi~~L~ 21 (171)
T d1mkya1 3 VLIVGRPNVGKSTLFNKLV 21 (171)
T ss_dssp EEEECCTTSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
T ss_conf 9999999998999999996
No 88
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=70.50 E-value=0.69 Score=22.87 Aligned_cols=23 Identities=35% Similarity=0.468 Sum_probs=20.1
Q ss_pred CCCEEEEEECCCCHHHHHHHHHH
Q ss_conf 02023553047740679999999
Q gi|254780799|r 453 RMPHLLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 453 kMPHLLIAGtTGSGKSV~iN~iI 475 (806)
+-||..+.|-|++|||--+|++.
T Consensus 15 ~~~~I~lvG~~NvGKSSL~n~L~ 37 (188)
T d1puia_ 15 TGIEVAFAGRSNAGKSSALNTLT 37 (188)
T ss_dssp CSEEEEEEECTTSSHHHHHTTTC
T ss_pred CCCEEEEECCCCCCHHHHHHHHH
T ss_conf 69789998899998999999985
No 89
>d1p4xa2 a.4.5.28 (A:126-250) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=70.20 E-value=2.4 Score=18.86 Aligned_cols=59 Identities=19% Similarity=0.329 Sum_probs=43.4
Q ss_pred HHHHHHHHCCC--EEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHH-HCCCCCEEEECHHHH
Q ss_conf 99999996598--500014222001177899999999977986802-278872673171253
Q gi|254780799|r 745 QAVDIVLRDNK--ASISYIQRRLGIGYNRAASIIENMEEKGVIGPA-SSTGKREILISSMEE 803 (806)
Q Consensus 745 ~a~~~v~~~~~--~s~s~lqr~~~igy~raar~~~~~e~~giv~~~-~g~~~r~vl~~~~~~ 803 (806)
.+..++...+. .+.+-|-+++.+--+...|+++.||++|.|.-. +..-.|.|++.-.++
T Consensus 37 ~vL~~l~~~~~~~~~~~~ia~~l~~~~~~vs~~v~~L~~~glV~r~~~~~D~R~v~i~LT~~ 98 (125)
T d1p4xa2 37 TILAIITSQNKNIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERKILIHMDDA 98 (125)
T ss_dssp HHHHHHHTTTTCCEEHHHHHHHSSSCHHHHHHHHHHHHHHTSSEEEECSSSTTCEEEECCHH
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHH
T ss_conf 99999998037883699999997898424999999998005776542178887578878999
No 90
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=70.19 E-value=1.4 Score=20.56 Aligned_cols=19 Identities=32% Similarity=0.609 Sum_probs=17.7
Q ss_pred EEEEECCCCHHHHHHHHHH
Q ss_conf 3553047740679999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI 475 (806)
..+.|-||+|||--||+++
T Consensus 8 I~iiG~~nvGKSSLin~L~ 26 (179)
T d1egaa1 8 IAIVGRPNVGKSTLLNKLL 26 (179)
T ss_dssp EEEECSSSSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
T ss_conf 9999799998999999995
No 91
>d2cyya1 a.4.5.32 (A:5-64) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=69.99 E-value=2.8 Score=18.31 Aligned_cols=49 Identities=27% Similarity=0.408 Sum_probs=42.9
Q ss_pred CHHHHHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHH
Q ss_conf 7038999999996598500014222001177899999999977986802
Q gi|254780799|r 740 DDLYKQAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGPA 788 (806)
Q Consensus 740 d~l~~~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~ 788 (806)
|++=.+-++...+..+.|.+-|-+++.+.-.-..+-|..||+.||+-..
T Consensus 2 D~~D~~Il~~L~~n~r~s~~eiA~~l~ls~~~v~~Ri~~L~~~giI~~~ 50 (60)
T d2cyya1 2 DEIDKKIIKILQNDGKAPLREISKITGLAESTIHERIRKLRESGVIKKF 50 (60)
T ss_dssp CHHHHHHHHHHHHCTTCCHHHHHHHHCSCHHHHHHHHHHHHHHTSSCCC
T ss_pred CHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 8899999999998289999999999893999999999999988974757
No 92
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=69.65 E-value=0.43 Score=24.39 Aligned_cols=47 Identities=15% Similarity=0.356 Sum_probs=26.6
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCCHH-HEEEEEECCCHHHHHHC
Q ss_conf 235530477406799999999999829957-84788852310011102
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYRMTPA-QCRLIMIDPKMLELSVY 502 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk~~P~-evkliliDPK~vEls~Y 502 (806)
++++-|..|+|||-.+|.+.-.-.-...|. ..+..-++.+-+++.++
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 51 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIW 51 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTCCCSSCCCCSSEEEEEEEETTEEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEE
T ss_conf 999999999899999999808998730235753043011345430366
No 93
>d1hsja1 a.4.5.28 (A:373-487) Staphylococcal accessory regulator A homolog, SarR {Staphylococcus aureus [TaxId: 1280]}
Probab=69.40 E-value=1.5 Score=20.24 Aligned_cols=57 Identities=12% Similarity=0.211 Sum_probs=43.9
Q ss_pred HHHHHHH--CCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCH-HHCCCCCEEEECHHH
Q ss_conf 9999996--59850001422200117789999999997798680-227887267317125
Q gi|254780799|r 746 AVDIVLR--DNKASISYIQRRLGIGYNRAASIIENMEEKGVIGP-ASSTGKREILISSME 802 (806)
Q Consensus 746 a~~~v~~--~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~-~~g~~~r~vl~~~~~ 802 (806)
++.++.. .+..|.+-|-+++.+--+...|+++.||++|.|-- .+..-.|.+++.-.+
T Consensus 37 vL~~l~~~~~~~~t~~ela~~l~~~~~~vs~~i~~Le~~gli~r~~~~~D~R~~~i~LT~ 96 (115)
T d1hsja1 37 ILNHILRSESNEISSKEIAKCSEFKPYYLTKALQKLKDLKLLSKKRSLQDERTVIVYVTD 96 (115)
T ss_dssp HHHHHHTCSCSEEEHHHHHHSSCCCHHHHHHHHHHHHTTTTSCCEECCSSSSCCEEECCS
T ss_pred HHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECH
T ss_conf 999998068999489999999788853599999999986876987604778458989998
No 94
>d3broa1 a.4.5.28 (A:3-137) Transcriptional regulator OEOE1854 {Oenococcus oeni [TaxId: 1247]}
Probab=69.03 E-value=2.9 Score=18.18 Aligned_cols=55 Identities=16% Similarity=0.243 Sum_probs=38.5
Q ss_pred HHHHHHHHCCC--EEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHC-CCCCEEEEC
Q ss_conf 99999996598--50001422200117789999999997798680227-887267317
Q gi|254780799|r 745 QAVDIVLRDNK--ASISYIQRRLGIGYNRAASIIENMEEKGVIGPASS-TGKREILIS 799 (806)
Q Consensus 745 ~a~~~v~~~~~--~s~s~lqr~~~igy~raar~~~~~e~~giv~~~~g-~~~r~vl~~ 799 (806)
.++.++...+. .|.+-|-+++.+-...+.|+++.||++|+|-.... .-.|.+.+.
T Consensus 33 ~vL~~l~~~~~~~it~~ela~~~~~~~~~vs~~l~~L~~~g~v~r~~~~~D~R~~~i~ 90 (135)
T d3broa1 33 TIIDYLSRNKNKEVLQRDLESEFSIKSSTATVLLQRMEIKKLLYRKVSGKDSRQKCLK 90 (135)
T ss_dssp HHHHHHHHTTTSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEE
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999707999999999999896886899999999888888888610025666520
No 95
>d1i1ga1 a.4.5.32 (A:2-61) LprA {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=68.93 E-value=2.9 Score=18.15 Aligned_cols=48 Identities=27% Similarity=0.474 Sum_probs=42.4
Q ss_pred CHHHHHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCH
Q ss_conf 703899999999659850001422200117789999999997798680
Q gi|254780799|r 740 DDLYKQAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGP 787 (806)
Q Consensus 740 d~l~~~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~ 787 (806)
|++=.+-+....+..+.|.+-|-+++.+--.-..+-|+.||++||+--
T Consensus 2 D~~D~kIl~~L~~n~r~s~~~lA~~~gls~~~v~~Ri~~L~~~giI~~ 49 (60)
T d1i1ga1 2 DERDKIILEILEKDARTPFTEIAKKLGISETAVRKRVKALEEKGIIEG 49 (60)
T ss_dssp CSHHHHHHHHHHHCTTCCHHHHHHHHTSCHHHHHHHHHHHHHHTSSCC
T ss_pred CHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEE
T ss_conf 889999999998849999999999989299999999999998897576
No 96
>d1sf9a_ b.34.15.1 (A:) Hypothetical protein YfhH {Bacillus subtilis [TaxId: 1423]}
Probab=68.87 E-value=0.86 Score=22.14 Aligned_cols=39 Identities=23% Similarity=0.310 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHCC
Q ss_conf 89999999999999999870899-6899999999887447
Q gi|254780799|r 521 TVLKWLVCEMEERYQKMSKIGVR-NIDGFNLKVAQYHNTG 559 (806)
Q Consensus 521 ~aL~w~V~EMe~RY~l~a~~~vR-ni~~yN~k~~~~~~~~ 559 (806)
.-|-+--++||.||.-|+..--| -|..+++|.++|...|
T Consensus 6 ~~~~~~~~~m~krySeMs~~EL~~EIa~L~EKaRKAEq~G 45 (118)
T d1sf9a_ 6 ENLYFQSNAMEKRYSQMTPHELNTEIALLSEKARKAEQHG 45 (118)
T ss_dssp GHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 2113312255677776699999999999999999999806
No 97
>d1z05a1 a.4.5.63 (A:10-80) Transcriptional regulator VC2007 N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=68.61 E-value=2.9 Score=18.24 Aligned_cols=43 Identities=7% Similarity=0.087 Sum_probs=39.3
Q ss_pred HHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 9999999965985000142220011778999999999779868
Q gi|254780799|r 744 KQAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIG 786 (806)
Q Consensus 744 ~~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~ 786 (806)
....+++.+.+..|.+-|-+++.+--.-..++++.|+++|+|-
T Consensus 9 ~~Il~~l~~~g~~sr~eLa~~~glS~~Tv~~~l~~L~~~Glv~ 51 (71)
T d1z05a1 9 GRVYKLIDQKGPISRIDLSKESELAPASITKITRELIDAHLIH 51 (71)
T ss_dssp HHHHHHHHHHCSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEE
T ss_conf 9999999985994899999998878878999999999889879
No 98
>d1z91a1 a.4.5.28 (A:8-144) Organic hydroperoxide resistance transcriptional regulator OhrR {Bacillus subtilis [TaxId: 1423]}
Probab=68.43 E-value=1.9 Score=19.62 Aligned_cols=17 Identities=18% Similarity=0.210 Sum_probs=7.0
Q ss_pred CHHHHHHHHHHHHHHHH
Q ss_conf 25665457899999974
Q gi|254780799|r 328 SPKVMQNNACTLKSVLS 344 (806)
Q Consensus 328 s~eeL~~nA~lLE~tL~ 344 (806)
+.+++++-.+.|.+.+.
T Consensus 118 ~~ee~~~l~~~L~~l~~ 134 (137)
T d1z91a1 118 SGEDLKQLKSALYTLLE 134 (137)
T ss_dssp CTHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
T ss_conf 99999999999999998
No 99
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=68.15 E-value=0.82 Score=22.30 Aligned_cols=29 Identities=28% Similarity=0.473 Sum_probs=20.1
Q ss_pred EECCCCCEEEEEECCCCHHHHHHHHHHHHH
Q ss_conf 541002023553047740679999999999
Q gi|254780799|r 449 ADLARMPHLLIAGTTGSGKSVAINTMILSL 478 (806)
Q Consensus 449 ~DLakMPHLLIAGtTGSGKSV~iN~iI~Sl 478 (806)
.|+.+ +=-+|.|-+|||||..+.+|-.-|
T Consensus 20 i~f~~-~~tvi~G~NGsGKStil~Ai~~~L 48 (222)
T d1qhla_ 20 FDLDE-LVTTLSGGNGAGKSTTMAAFVTAL 48 (222)
T ss_dssp ECHHH-HHHHHHSCCSHHHHHHHHHHHHHH
T ss_pred EECCC-CEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 97499-808998899998799999999996
No 100
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=68.06 E-value=1.1 Score=21.49 Aligned_cols=34 Identities=29% Similarity=0.414 Sum_probs=23.1
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECC
Q ss_conf 0020235530477406799999999999829957847888523
Q gi|254780799|r 452 ARMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDP 494 (806)
Q Consensus 452 akMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDP 494 (806)
|||..+.|-|.-|||||.- ...|-+ ...+..||.
T Consensus 4 ~r~mrIiliG~PGSGKtT~-----a~~La~----~~g~~~is~ 37 (189)
T d2ak3a1 4 ARLLRAAIMGAPGSGKGTV-----SSRITK----HFELKHLSS 37 (189)
T ss_dssp SCCCEEEEECCTTSSHHHH-----HHHHHH----HBCCEEEEH
T ss_pred CCCEEEEEECCCCCCHHHH-----HHHHHH----HHCCEEECH
T ss_conf 7621699988999987999-----999999----979868718
No 101
>d1h1oa1 a.3.1.4 (A:12-93) Cytochrome c4 {Thiobacillus ferrooxidans [TaxId: 920]}
Probab=67.97 E-value=1.7 Score=19.91 Aligned_cols=21 Identities=5% Similarity=0.115 Sum_probs=18.2
Q ss_pred CCCHHHHHHHHHHHHHCCCCC
Q ss_conf 489889999999997128974
Q gi|254780799|r 696 FVSDIEVEKVVSHLKTQGEAK 716 (806)
Q Consensus 696 ~v~~~ev~~v~~~~~~q~~~~ 716 (806)
=+||+||..|++|+++|..|.
T Consensus 59 ~LSd~eI~~la~Yi~sl~pP~ 79 (82)
T d1h1oa1 59 ALDSAKITALADYFNAQKPPM 79 (82)
T ss_dssp TCCHHHHHHHHHHHHHCSSCS
T ss_pred HCCHHHHHHHHHHHHHCCCCC
T ss_conf 579999999999998289988
No 102
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=67.81 E-value=2.3 Score=18.91 Aligned_cols=36 Identities=25% Similarity=0.357 Sum_probs=27.5
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHH
Q ss_conf 0235530477406799999999999829957847888523100
Q gi|254780799|r 455 PHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKML 497 (806)
Q Consensus 455 PHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~v 497 (806)
.++|+-|..|+|||-.++++--.+ .+.++-+++..+
T Consensus 42 ~giLL~Gp~GtGKT~l~~ala~~~-------~~~~~~~~~~~l 77 (265)
T d1r7ra3 42 KGVLFYGPPGCGKTLLAKAIANEC-------QANFISIKGPEL 77 (265)
T ss_dssp CEEEEBCCTTSSHHHHHHHHHHHT-------TCEEEEECHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHH-------CCCEEEEEHHHH
T ss_conf 757887899876304778878771-------894799887995
No 103
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=67.11 E-value=1.8 Score=19.77 Aligned_cols=24 Identities=29% Similarity=0.519 Sum_probs=18.8
Q ss_pred CCCCEEEE-EECCCCHHHHHHHHHH
Q ss_conf 00202355-3047740679999999
Q gi|254780799|r 452 ARMPHLLI-AGTTGSGKSVAINTMI 475 (806)
Q Consensus 452 akMPHLLI-AGtTGSGKSV~iN~iI 475 (806)
..+||++| .|..|||||--...+-
T Consensus 3 ~~~~~iivl~G~~GsGKsT~a~~La 27 (171)
T d1knqa_ 3 NHDHHIYVLMGVSGSGKSAVASEVA 27 (171)
T ss_dssp CTTSEEEEEECSTTSCHHHHHHHHH
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHH
T ss_conf 9987189998999989899999999
No 104
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=67.07 E-value=1.8 Score=19.77 Aligned_cols=28 Identities=32% Similarity=0.624 Sum_probs=24.4
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf 0202355304774067999999999998
Q gi|254780799|r 453 RMPHLLIAGTTGSGKSVAINTMILSLLY 480 (806)
Q Consensus 453 kMPHLLIAGtTGSGKSV~iN~iI~SlLy 480 (806)
..||+|+=|-.|+||+-.+.++.-+++.
T Consensus 32 ~~~~lll~Gp~G~GKTt~~~~la~~l~~ 59 (252)
T d1sxje2 32 DLPHLLLYGPNGTGKKTRCMALLESIFG 59 (252)
T ss_dssp CCCCEEEECSTTSSHHHHHHTHHHHHSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 8785998899999889999999976227
No 105
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=67.07 E-value=2 Score=19.48 Aligned_cols=46 Identities=15% Similarity=0.316 Sum_probs=28.8
Q ss_pred CCEEEEEHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCEEEEEEECC
Q ss_conf 986877634468888732----------1005889999998664142379999657
Q gi|254780799|r 589 MPYIVVVIDEMADLMMVA----------RKDIESAVQRLAQMARASGIHVIMATQR 634 (806)
Q Consensus 589 lp~ivviiDElaDlmm~~----------~~~ve~~i~rlaq~ara~GiHli~aTqr 634 (806)
.+--++++|-++.++-.. .+..-.....+..+++...+.+++.+|.
T Consensus 135 ~~~~~~viDs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 190 (254)
T d1pzna2 135 RPVKLLIVDSLTSHFRSEYIGRGALAERQQKLAKHLADLHRLANLYDIAVFVTNQV 190 (254)
T ss_dssp SCEEEEEEETSSTTHHHHCCSTTTHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CCCEEEEECCHHHEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEE
T ss_conf 58426860311210102330663033467899999999888753020699962267
No 106
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=66.85 E-value=1.5 Score=20.33 Aligned_cols=16 Identities=38% Similarity=0.538 Sum_probs=13.1
Q ss_pred EEEEEECCCCHHHHHH
Q ss_conf 2355304774067999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAI 471 (806)
Q Consensus 456 HLLIAGtTGSGKSV~i 471 (806)
++||.--||||||.|-
T Consensus 42 ~vlv~apTGsGKT~~~ 57 (206)
T d1oywa2 42 DCLVVMPTGGGKSLCY 57 (206)
T ss_dssp CEEEECSCHHHHHHHH
T ss_pred CEEEECCCCCCCCCHH
T ss_conf 8899867889975231
No 107
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=66.63 E-value=3.2 Score=17.83 Aligned_cols=60 Identities=23% Similarity=0.319 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHCCCE-EEEHHHHHHCC-CHHHHHHHHHHHHHCCCCCHHHCCCCCEEEECHH
Q ss_conf 0389999999965985-00014222001-1778999999999779868022788726731712
Q gi|254780799|r 741 DLYKQAVDIVLRDNKA-SISYIQRRLGI-GYNRAASIIENMEEKGVIGPASSTGKREILISSM 801 (806)
Q Consensus 741 ~l~~~a~~~v~~~~~~-s~s~lqr~~~i-gy~raar~~~~~e~~giv~~~~g~~~r~vl~~~~ 801 (806)
.+|+=..+++.+.+.+ |..=|++.|.+ .-+.+.+.++.||++|.+--. .+++|-+-+..+
T Consensus 9 ~vL~~I~~~~~~~G~~Ps~rei~~~~g~~S~stv~~~l~~Le~kG~I~r~-~~~~R~i~i~~~ 70 (71)
T d1jhfa1 9 EVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIV-SGASRGIRLLQE 70 (71)
T ss_dssp HHHHHHHHHHHHHSSCCCHHHHHHHTTCSSHHHHHHHHHHHHHTTSEEEC-SSSSSCEEECCC
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEECC-CCCCCEEEECCC
T ss_conf 99999999999828898899999772999999999999999997593068-999851673278
No 108
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=66.41 E-value=2.9 Score=18.22 Aligned_cols=67 Identities=24% Similarity=0.382 Sum_probs=38.1
Q ss_pred EEEHHHHH-HHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCEEEEEECCCCCCHHHCCCCCH
Q ss_conf 77634468-88873210058899999986641423799996577753554355411025158764586642123388645
Q gi|254780799|r 593 VVVIDEMA-DLMMVARKDIESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKANFPTRISFQVSSKIDSRTILGEQGA 671 (806)
Q Consensus 593 vviiDEla-Dlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ikan~p~riaf~v~s~~dSrtild~~ga 671 (806)
|+|.||-- -|=....++|.+.|..+++ |.-+|+.|.|++ .++ .--||.+ +|--.|..+.-.
T Consensus 160 ililDEpts~LD~~~~~~i~~~l~~l~~-----~~Tvi~itH~l~------~~~--~~D~i~v-----l~~G~iv~~G~~ 221 (242)
T d1mv5a_ 160 ILMLDEATASLDSESESMVQKALDSLMK-----GRTTLVIAHRLS------TIV--DADKIYF-----IEKGQITGSGKH 221 (242)
T ss_dssp EEEEECCSCSSCSSSCCHHHHHHHHHHT-----TSEEEEECCSHH------HHH--HCSEEEE-----EETTEECCCSCH
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCC-----CCEEEEEECCHH------HHH--HCCEEEE-----EECCEEEEECCH
T ss_conf 9996588655698899999887888717-----998999978799------998--4999999-----989999999999
Q ss_pred HHHCCC
Q ss_conf 786588
Q gi|254780799|r 672 EQLLGQ 677 (806)
Q Consensus 672 e~Llg~ 677 (806)
+.|+-+
T Consensus 222 ~eLl~~ 227 (242)
T d1mv5a_ 222 NELVAT 227 (242)
T ss_dssp HHHHHH
T ss_pred HHHHHC
T ss_conf 999868
No 109
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=66.27 E-value=2.8 Score=18.29 Aligned_cols=160 Identities=18% Similarity=0.282 Sum_probs=78.3
Q ss_pred EECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHH-HH-----------------------HCCC
Q ss_conf 54100202355304774067999999999998299578478885231001-11-----------------------0277
Q gi|254780799|r 449 ADLARMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKMLE-LS-----------------------VYDG 504 (806)
Q Consensus 449 ~DLakMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~vE-ls-----------------------~Y~~ 504 (806)
.++.+==.+-|.|-.|||||..+++|. . |+ +|+.=+. .+|=+-+. ++ +|.+
T Consensus 23 ~~i~~GEi~~iiG~sGsGKSTLl~~i~-G-l~--~p~~G~I-~~~G~~i~~~~~~~~~~~~~~~~~~~~~r~~ig~vfQ~ 97 (258)
T d1b0ua_ 23 LQARAGDVISIIGSSGSGKSTFLRCIN-F-LE--KPSEGAI-IVNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQH 97 (258)
T ss_dssp EEECTTCEEEEECCTTSSHHHHHHHHT-T-SS--CCSEEEE-EETTEECCEEECTTSSEEESCHHHHHHHHHHEEEECSS
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHH-C-CC--CCCCCCE-EECCEEECCCCCCCHHCCCCCHHHHHHHHCCEEEEEEC
T ss_conf 688699799999899982999999997-4-76--6789977-99999933677520000235176799974544899833
Q ss_pred CHHHHCCCCCCHHHHHHH----HHHHHHHHHH-HHHHHHHCCC---------CCHHHHH-HHHHHHHHCCCCCCCCCCCC
Q ss_conf 034312233430456689----9999999999-9999987089---------9689999-99998874478667754467
Q gi|254780799|r 505 IPNLLTPVVTNPQKAVTV----LKWLVCEMEE-RYQKMSKIGV---------RNIDGFN-LKVAQYHNTGKKFNRTVQTG 569 (806)
Q Consensus 505 iPHLl~pVvTd~~kA~~a----L~w~V~EMe~-RY~l~a~~~v---------Rni~~yN-~k~~~~~~~~~~~~~~~~~~ 569 (806)
|+|. |--|=-.....+ ..|.-.|+.+ ..+++...|. ..+.|=| +|+.-|+.
T Consensus 98 -~~l~-~~~tv~env~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~p~~LSGG~~QRv~iAra------------ 163 (258)
T d1b0ua_ 98 -FNLW-SHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARA------------ 163 (258)
T ss_dssp -CCCC-TTSCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCHHHHTSCGGGSCHHHHHHHHHHHH------------
T ss_pred -HHHC-CCHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHH------------
T ss_conf -2314-11010213656578762999899999999999982995244306822056778889899999------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEHHH-HHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCC
Q ss_conf 76545432223322323469868776344-68888732100588999999866414237999965777535543554110
Q gi|254780799|r 570 FDRKTGEAIYETEHFDFQHMPYIVVVIDE-MADLMMVARKDIESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKANF 648 (806)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~lp~ivviiDE-laDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ikan~ 648 (806)
+-.=|-| ++-|| .+-|=..+.++|-+.|.+|++. |+-.|+.|..... + +.+
T Consensus 164 ----------------L~~~P~l-lilDEPT~gLD~~~~~~i~~ll~~l~~~----g~til~vtHdl~~------~-~~~ 215 (258)
T d1b0ua_ 164 ----------------LAMEPDV-LLFDEPTSALDPELVGEVLRIMQQLAEE----GKTMVVVTHEMGF------A-RHV 215 (258)
T ss_dssp ----------------HHTCCSE-EEEESTTTTSCHHHHHHHHHHHHHHHHT----TCCEEEECSCHHH------H-HHH
T ss_pred ----------------HHCCCCE-EEECCCCCCCCHHHHHHHHHHHHHHCCC----CCCEEEEECCHHH------H-HHH
T ss_conf ----------------8439987-8852455568878888998765541036----8833899489999------9-986
Q ss_pred CCEEEEE
Q ss_conf 2515876
Q gi|254780799|r 649 PTRISFQ 655 (806)
Q Consensus 649 p~riaf~ 655 (806)
-.||++=
T Consensus 216 adri~vm 222 (258)
T d1b0ua_ 216 SSHVIFL 222 (258)
T ss_dssp CSEEEEE
T ss_pred CCEEEEE
T ss_conf 9999999
No 110
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.06 E-value=1.2 Score=21.06 Aligned_cols=26 Identities=19% Similarity=0.392 Sum_probs=19.9
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf 23553047740679999999999982
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYR 481 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk 481 (806)
|+++..-|||||+.|---=|+.-|.+
T Consensus 56 dvi~~a~TGSGKTlayllPil~~l~~ 81 (222)
T d2j0sa1 56 DVIAQSQSGTGKTATFSISVLQCLDI 81 (222)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHTCCT
T ss_pred CEEEECCCCHHHHHHHCCCCCCCCCC
T ss_conf 86997574341454404540110033
No 111
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=65.90 E-value=1 Score=21.55 Aligned_cols=24 Identities=25% Similarity=0.491 Sum_probs=19.9
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHH
Q ss_conf 020235530477406799999999
Q gi|254780799|r 453 RMPHLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 453 kMPHLLIAGtTGSGKSV~iN~iI~ 476 (806)
|=|=.-|||.+|||||-.-|++--
T Consensus 3 k~pIIgIaG~SGSGKTTva~~l~~ 26 (288)
T d1a7ja_ 3 KHPIISVTGSSGAGTSTVKHTFDQ 26 (288)
T ss_dssp TSCEEEEESCC---CCTHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHH
T ss_conf 888999989997809999999999
No 112
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=65.68 E-value=2.4 Score=18.83 Aligned_cols=35 Identities=17% Similarity=0.229 Sum_probs=27.2
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCH
Q ss_conf 023553047740679999999999982995784788852310
Q gi|254780799|r 455 PHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKM 496 (806)
Q Consensus 455 PHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~ 496 (806)
.|+|..|-.|+|||-..+++.--+ .+.++-||+..
T Consensus 43 ~giLl~GppGtGKT~la~aia~~~-------~~~~~~i~~~~ 77 (247)
T d1ixza_ 43 KGVLLVGPPGVGKTHLARAVAGEA-------RVPFITASGSD 77 (247)
T ss_dssp SEEEEECCTTSSHHHHHHHHHHHT-------TCCEEEEEHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHC-------CCCEEEEEHHH
T ss_conf 648876689888359999999873-------99779978699
No 113
>d1twfk_ d.74.3.2 (K:) RPB11 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=65.40 E-value=3.4 Score=17.67 Aligned_cols=56 Identities=13% Similarity=0.223 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHCCHHHEEEEEECCCHHHHHHCCCCHHHHCC-----CCCCHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999982995784788852310011102770343122-----334304-5668999999999999999987
Q gi|254780799|r 471 INTMILSLLYRMTPAQCRLIMIDPKMLELSVYDGIPNLLTP-----VVTNPQ-KAVTVLKWLVCEMEERYQKMSK 539 (806)
Q Consensus 471 iN~iI~SlLyk~~P~evkliliDPK~vEls~Y~~iPHLl~p-----VvTd~~-kA~~aL~w~V~EMe~RY~l~a~ 539 (806)
+--+|-+.|++ | +.|++..|. +||=+.+ |-|+.. ++..+|+++|++.-.-|+.+.+
T Consensus 42 lGnlL~~~L~~-----------~-~~V~fagY~-~pHPl~~~i~irI~t~~~~~p~~~l~~a~~~l~~~~~~l~~ 103 (114)
T d1twfk_ 42 LGNLIRAELLN-----------D-RKVLFAAYK-VEHPFFARFKLRIQTTEGYDPKDALKNACNSIINKLGALKT 103 (114)
T ss_dssp HHHHHHHHHTT-----------C-TTEEEEEEE-CSCTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-----------C-CCCEEEEEE-CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999944-----------9-983398862-68887782489999589999999999999999999999999
No 114
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=65.24 E-value=1.6 Score=20.09 Aligned_cols=23 Identities=30% Similarity=0.333 Sum_probs=17.5
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf 553047740679999999999982
Q gi|254780799|r 458 LIAGTTGSGKSVAINTMILSLLYR 481 (806)
Q Consensus 458 LIAGtTGSGKSV~iN~iI~SlLyk 481 (806)
-|+|.+|||||-.-|.+- ..|-.
T Consensus 26 gI~G~~GSGKSTla~~L~-~~l~~ 48 (198)
T d1rz3a_ 26 GIDGLSRSGKTTLANQLS-QTLRE 48 (198)
T ss_dssp EEEECTTSSHHHHHHHHH-HHHHH
T ss_pred EEECCCCCCHHHHHHHHH-HHHCC
T ss_conf 978988789999999999-98363
No 115
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=65.23 E-value=1 Score=21.51 Aligned_cols=111 Identities=20% Similarity=0.140 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH-HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEH
Q ss_conf 566899999999999999998708996899999999887-4478667754467765454322233223234698687763
Q gi|254780799|r 518 KAVTVLKWLVCEMEERYQKMSKIGVRNIDGFNLKVAQYH-NTGKKFNRTVQTGFDRKTGEAIYETEHFDFQHMPYIVVVI 596 (806)
Q Consensus 518 kA~~aL~w~V~EMe~RY~l~a~~~vRni~~yN~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~ivvii 596 (806)
|-...++|+++ .--+.++-.-|||-+.-.+ +++.. ..|..-. ++.. ..| ....++.++-|+
T Consensus 75 kD~~~i~~a~~---~~vD~ialSFVr~~~Dv~~-~r~~l~~~~~~~~-~iia---------KIE-~~~al~nldeIi--- 136 (246)
T d1e0ta2 75 KDKQDLIFGCE---QGVDFVAASFIRKRSDVIE-IREHLKAHGGENI-HIIS---------KIE-NQEGLNNFDEIL--- 136 (246)
T ss_dssp HHHHHHHHHHH---HTCSEEEESSCCSHHHHHH-HHHHHHTTTCTTC-EEEE---------EEC-SHHHHHTHHHHH---
T ss_pred CCCHHHHHHHH---CCCCEEEECCCCCHHHHHH-HHHHHHHHCCCCC-EEEE---------EEC-CHHHHHCHHHHH---
T ss_conf 73145668987---3999999848787787999-9999997277773-2788---------852-465553507777---
Q ss_pred HHHHHHHHHCCCH---------HHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCEE
Q ss_conf 4468888732100---------5889999998664142379999657775355435541102515
Q gi|254780799|r 597 DEMADLMMVARKD---------IESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKANFPTRI 652 (806)
Q Consensus 597 DElaDlmm~~~~~---------ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ikan~p~ri 652 (806)
+.+|-.|+|.-| |=..-.++-++++.+|.-.|+||| +.-.+++...|||-
T Consensus 137 -~~sDgImIaRGDLg~ei~~e~vp~~Qk~ii~~~~~~~kpvi~ATq-----~LeSM~~~p~PTRA 195 (246)
T d1e0ta2 137 -EASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATM-----MLDSMIKNPRPTDA 195 (246)
T ss_dssp -HHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC--------------CCCHH
T ss_pred -HHCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEHH-----HHHHHHCCCCCCHH
T ss_conf -646668997330111079999888799999999985798798144-----34556508998568
No 116
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.82 E-value=3.2 Score=17.83 Aligned_cols=156 Identities=19% Similarity=0.210 Sum_probs=70.2
Q ss_pred EEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC---------------CH----HHEEEEEECCCHHHHHHCCCCHH
Q ss_conf 785410020235530477406799999999999829---------------95----78478885231001110277034
Q gi|254780799|r 447 IIADLARMPHLLIAGTTGSGKSVAINTMILSLLYRM---------------TP----AQCRLIMIDPKMLELSVYDGIPN 507 (806)
Q Consensus 447 vv~DLakMPHLLIAGtTGSGKSV~iN~iI~SlLyk~---------------~P----~evkliliDPK~vEls~Y~~iPH 507 (806)
+-.++.+==.+-|-|.+|||||.-++.|. . ||+. ++ ..+-++-=||-....++++.|--
T Consensus 33 isl~i~~Ge~vaivG~sGsGKSTLl~li~-g-l~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~ 110 (251)
T d1jj7a_ 33 LTFTLRPGEVTALVGPNGSGKSTVAALLQ-N-LYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQENIAY 110 (251)
T ss_dssp EEEEECTTCEEEEECSTTSSHHHHHHHHT-T-SSCCSEEEEEETTEEGGGBCHHHHHHHEEEECSSCCCCSSBHHHHHHC
T ss_pred EEEEECCCCEEEEECCCCCCHHHHHHHHH-C-CCCCCCCEEEECCEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
T ss_conf 38998499899999999984999999986-1-437876899889985311013788877654045650027634655454
Q ss_pred HHCCCCCCHHHHHHH----HHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 312233430456689----99999999999999987089968999-9999988744786677544677654543222332
Q gi|254780799|r 508 LLTPVVTNPQKAVTV----LKWLVCEMEERYQKMSKIGVRNIDGF-NLKVAQYHNTGKKFNRTVQTGFDRKTGEAIYETE 582 (806)
Q Consensus 508 Ll~pVvTd~~kA~~a----L~w~V~EMe~RY~l~a~~~vRni~~y-N~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (806)
-+.+-.++....... +...+..+...|+..-..+-.++.|= -+|+.-|++-
T Consensus 111 g~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~i~~~~~~LSGGqkQRvaiARal------------------------ 166 (251)
T d1jj7a_ 111 GLTQKPTMEEITAAAVKSGAHSFISGLPQGYDTEVDEAGSQLSGGQRQAVALARAL------------------------ 166 (251)
T ss_dssp SCSSCCCHHHHHHHHHHHTCHHHHHTSTTGGGCBCCSSCSSSCHHHHHHHHHHHHH------------------------
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHCEEEEEEECC------------------------
T ss_conf 21013027889999999989999985612111367516766895470489986044------------------------
Q ss_pred CCCCCCCCEEEEEHHHHH-HHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCC
Q ss_conf 232346986877634468-888732100588999999866414237999965777
Q gi|254780799|r 583 HFDFQHMPYIVVVIDEMA-DLMMVARKDIESAVQRLAQMARASGIHVIMATQRPS 636 (806)
Q Consensus 583 ~~~~~~lp~ivviiDEla-Dlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPs 636 (806)
-.=|- |+|.||-- -|=....++|.+.|.+ ..+-.|.-.|+.|.|++
T Consensus 167 ----~~~p~-ililDEpTs~LD~~~~~~i~~~l~~---l~~~~~~Tvi~itH~l~ 213 (251)
T d1jj7a_ 167 ----IRKPC-VLILDDATSALDANSQLQVEQLLYE---SPERYSRSVLLITQHLS 213 (251)
T ss_dssp ----TTCCS-EEEEESTTTTCCHHHHHHHHHHHHT---CGGGGGCEEEEECSCHH
T ss_pred ----CCCCC-EEEECCCCCCCCHHHHHHHHHHHHH---HHHHCCCEEEEEECCHH
T ss_conf ----56870-7871675765685368999999999---76506989999959799
No 117
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=64.70 E-value=2.8 Score=18.30 Aligned_cols=48 Identities=27% Similarity=0.364 Sum_probs=32.7
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHH---HHCCH--HHEEEEEECCCHHHHHHCC
Q ss_conf 235530477406799999999999---82995--7847888523100111027
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLL---YRMTP--AQCRLIMIDPKMLELSVYD 503 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlL---yk~~P--~evkliliDPK~vEls~Y~ 503 (806)
.+++.|..|+|||-.+|.++..-. |..+. +-.+.+.+|.+.+.+.+++
T Consensus 6 Ki~lvG~~~vGKTsll~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~i~d 58 (169)
T d1x1ra1 6 KLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLD 58 (169)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSSCCTTCCTTCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
T ss_conf 99999989959899999997098885457631201011112355322012201
No 118
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=64.53 E-value=1.9 Score=19.50 Aligned_cols=20 Identities=40% Similarity=0.557 Sum_probs=16.8
Q ss_pred EEEEECCCCHHHHHHHHHHH
Q ss_conf 35530477406799999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~ 476 (806)
.+|-|++|||||--.+.+--
T Consensus 10 I~i~G~~GsGKTTla~~La~ 29 (192)
T d1lw7a2 10 VAILGGESSGKSVLVNKLAA 29 (192)
T ss_dssp EEEECCTTSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99989999989999999999
No 119
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=64.50 E-value=1.4 Score=20.56 Aligned_cols=46 Identities=33% Similarity=0.485 Sum_probs=28.8
Q ss_pred EEEECCCCHHHHHHHHHHHHHH------------HHCCHHHEEEEEE-------C-CCHHHHHHCC
Q ss_conf 5530477406799999999999------------8299578478885-------2-3100111027
Q gi|254780799|r 458 LIAGTTGSGKSVAINTMILSLL------------YRMTPAQCRLIMI-------D-PKMLELSVYD 503 (806)
Q Consensus 458 LIAGtTGSGKSV~iN~iI~SlL------------yk~~P~evklili-------D-PK~vEls~Y~ 503 (806)
.++|..|.|||--||+++=..- =|+|-....|+.+ | |=+=||.+..
T Consensus 99 ~~~G~SGVGKSTLiN~L~~~~~~~T~~vs~~~~rGrHTTt~~~l~~l~~gg~iiDTPG~r~~~l~~ 164 (225)
T d1u0la2 99 TMAGLSGVGKSSLLNAINPGLKLRVSEVSEKLQRGRHTTTTAQLLKFDFGGYVVDTPGFANLEIND 164 (225)
T ss_dssp EEECSTTSSHHHHHHHHSTTCCCC-------------CCCSCCEEECTTSCEEESSCSSTTCCCCS
T ss_pred EEECCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCC
T ss_conf 997889877888877305355501068420048987511331478978991799687655455545
No 120
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=64.20 E-value=1.9 Score=19.49 Aligned_cols=22 Identities=18% Similarity=0.443 Sum_probs=17.1
Q ss_pred EEEEECCCCHHHHHHHHHHHHH
Q ss_conf 3553047740679999999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSL 478 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~Sl 478 (806)
..|.|..|||||--.+-+--.|
T Consensus 4 I~i~G~~GsGKsT~~~~L~~~l 25 (190)
T d1khta_ 4 VVVTGVPGVGSTTSSQLAMDNL 25 (190)
T ss_dssp EEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
T ss_conf 9998999989899999999999
No 121
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=64.14 E-value=1.8 Score=19.80 Aligned_cols=55 Identities=18% Similarity=0.298 Sum_probs=31.6
Q ss_pred CEEEEEHHH-HHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCEEEEE
Q ss_conf 868776344-688887321005889999998664142379999657775355435541102515876
Q gi|254780799|r 590 PYIVVVIDE-MADLMMVARKDIESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKANFPTRISFQ 655 (806)
Q Consensus 590 p~ivviiDE-laDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ikan~p~riaf~ 655 (806)
|-| ++-|| .+-|=..+..++.+.|.+|.+ .-|+-.|+.|..+.. =..+-.||++=
T Consensus 146 P~i-LllDEPts~LD~~~~~~i~~~l~~l~~---~~g~tii~vtHd~~~-------~~~~~drv~vm 201 (229)
T d3d31a2 146 PKI-LLLDEPLSALDPRTQENAREMLSVLHK---KNKLTVLHITHDQTE-------ARIMADRIAVV 201 (229)
T ss_dssp CSE-EEEESSSTTSCHHHHHHHHHHHHHHHH---HTTCEEEEEESCHHH-------HHHHCSEEEEE
T ss_pred CCC-EEECCCCCCCCHHHHHHHHHHHHHHHH---CCCCEEEEECCCHHH-------HHHHCCEEEEE
T ss_conf 771-443478767998999999999999986---479689997499999-------99969999999
No 122
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=63.94 E-value=1.4 Score=20.63 Aligned_cols=21 Identities=24% Similarity=0.379 Sum_probs=16.2
Q ss_pred CCCEEEEEECCCCHHHHHHHH
Q ss_conf 020235530477406799999
Q gi|254780799|r 453 RMPHLLIAGTTGSGKSVAINT 473 (806)
Q Consensus 453 kMPHLLIAGtTGSGKSV~iN~ 473 (806)
+=+++.|.|-.|||||---..
T Consensus 2 ~Pm~I~i~GppGsGKsT~a~~ 22 (189)
T d1zaka1 2 DPLKVMISGAPASGKGTQCEL 22 (189)
T ss_dssp CSCCEEEEESTTSSHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHH
T ss_conf 972999988999998999999
No 123
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=63.44 E-value=1.6 Score=20.19 Aligned_cols=46 Identities=11% Similarity=0.185 Sum_probs=30.4
Q ss_pred CCHHHHHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHHH
Q ss_conf 770389999999965985000142220011778999999999779868022
Q gi|254780799|r 739 ADDLYKQAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGPAS 789 (806)
Q Consensus 739 ~d~l~~~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~~ 789 (806)
.|+.....++...+.+..|. |=.+.--|+||-+=.|+.+..|.+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~S~-----R~~~~llrvArtiA~L~gr~~V~~~d 297 (333)
T d1g8pa_ 252 PNTALYDCAALCIALGSDGL-----RGELTLLRSARALAALEGATAVGRDH 297 (333)
T ss_dssp CHHHHHHHHHHHHHSSSCSH-----HHHHHHHHHHHHHHHHTTCSBCCHHH
T ss_pred CHHHHHHHHHHHHHCCCCCH-----HHHHHHHHHHHHHHHHCCCCCCCHHH
T ss_conf 89999999999997089883-----79999999999999976989989999
No 124
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=63.30 E-value=2.3 Score=18.88 Aligned_cols=43 Identities=21% Similarity=0.312 Sum_probs=25.8
Q ss_pred EEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECC
Q ss_conf 785410020235530477406799999999999829957847888523
Q gi|254780799|r 447 IIADLARMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDP 494 (806)
Q Consensus 447 vv~DLakMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDP 494 (806)
+-.++.+==.+-|-|.+|||||..++.|. =| ..|++=+ |.||=
T Consensus 34 isl~i~~Ge~iaivG~sGsGKSTLl~ll~--gl--~~p~~G~-I~i~g 76 (253)
T d3b60a1 34 INLKIPAGKTVALVGRSGSGKSTIASLIT--RF--YDIDEGH-ILMDG 76 (253)
T ss_dssp EEEEECTTCEEEEEECTTSSHHHHHHHHT--TT--TCCSEEE-EEETT
T ss_pred EEEEECCCCEEEEECCCCCHHHHHHHHHH--CC--CCCCCCE-EEECC
T ss_conf 28998599999999999985999999986--21--6888468-98788
No 125
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=63.28 E-value=3 Score=18.14 Aligned_cols=35 Identities=26% Similarity=0.327 Sum_probs=23.1
Q ss_pred EEEEEEC-CCCHHHHHHHHHHHHHHHHCCHHHEEEEEECC
Q ss_conf 2355304-77406799999999999829957847888523
Q gi|254780799|r 456 HLLIAGT-TGSGKSVAINTMILSLLYRMTPAQCRLIMIDP 494 (806)
Q Consensus 456 HLLIAGt-TGSGKSV~iN~iI~SlLyk~~P~evkliliDP 494 (806)
-+.|.|| ||.|||+---.+-..|=-+ --|-+.|||
T Consensus 3 ~~~i~gt~~GVGKTtvs~~La~aLa~~----G~rVl~id~ 38 (224)
T d1byia_ 3 RYFVTGTDTEVGKTVASCALLQAAKAA----GYRTAGYKP 38 (224)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHHHT----TCCEEEECS
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHC----CCEEEEECC
T ss_conf 199998999942999999999999977----993999886
No 126
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=62.75 E-value=2.4 Score=18.82 Aligned_cols=19 Identities=32% Similarity=0.604 Sum_probs=15.7
Q ss_pred EEEEECCCCHHHHHHHHHH
Q ss_conf 3553047740679999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI 475 (806)
++|.|..|||||--.+.+-
T Consensus 5 I~i~G~~GsGKTTva~~L~ 23 (176)
T d2bdta1 5 YIITGPAGVGKSTTCKRLA 23 (176)
T ss_dssp EEEECSTTSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
T ss_conf 9998999999899999999
No 127
>d1pbya1 a.3.1.7 (A:1-85) Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 {Paracoccus denitrificans [TaxId: 266]}
Probab=62.73 E-value=1.9 Score=19.61 Aligned_cols=25 Identities=28% Similarity=0.351 Sum_probs=21.0
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHCC
Q ss_conf 2588833489889999999997128
Q gi|254780799|r 689 VQRIHGPFVSDIEVEKVVSHLKTQG 713 (806)
Q Consensus 689 ~~r~~g~~v~~~ev~~v~~~~~~q~ 713 (806)
.+..|||.++|+|+..|++|+.++.
T Consensus 43 M~~~~Ga~l~~~e~~~Iv~YLa~~y 67 (85)
T d1pbya1 43 MMRNHGVALEPEERAAIVRHLSDTR 67 (85)
T ss_dssp HHHHSCCCCCHHHHHHHHHHHHHHS
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHC
T ss_conf 9988389999899999999999976
No 128
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=62.63 E-value=3 Score=18.11 Aligned_cols=39 Identities=23% Similarity=0.312 Sum_probs=25.7
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHH
Q ss_conf 355304774067999999999998299578478885231001
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKMLE 498 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~vE 498 (806)
.+|.|..|||||--+|.++-.+ .+-.++-.|=.||---+
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~---~~~~~~~ivn~d~~~~~ 41 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYL---EDNYKVAYVNLDTGVKE 41 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH---TTTSCEEEEECCSSCSC
T ss_pred EEEECCCCCCHHHHHHHHHHHH---HHCCEEEEEECCCCCCC
T ss_conf 9999189983999999999988---43876899966766445
No 129
>d1okra_ a.4.5.39 (A:) Methicillin resistance regulatory protein MecI {Staphylococcus aureus [TaxId: 1280]}
Probab=62.50 E-value=3.5 Score=17.57 Aligned_cols=44 Identities=18% Similarity=0.273 Sum_probs=28.7
Q ss_pred HHHHHHHHCCCEEEEHHHHHH----CCCHHHHHHHHHHHHHCCCCCHH
Q ss_conf 999999965985000142220----01177899999999977986802
Q gi|254780799|r 745 QAVDIVLRDNKASISYIQRRL----GIGYNRAASIIENMEEKGVIGPA 788 (806)
Q Consensus 745 ~a~~~v~~~~~~s~s~lqr~~----~igy~raar~~~~~e~~giv~~~ 788 (806)
+..+++.+.+.++++-|+.++ .+.|+--.++++.||++|+|.-.
T Consensus 11 ~VM~~lW~~~~~t~~ei~~~l~~~~~~~~sTv~t~L~rL~~Kg~l~r~ 58 (120)
T d1okra_ 11 EVMNIIWMKKYASANNIIEEIQMQKDWSPKTIRTLITRLYKKGFIDRK 58 (120)
T ss_dssp HHHHHHHHHSSEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 999999858997899999997521286487699999999978985887
No 130
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=62.35 E-value=3.8 Score=17.29 Aligned_cols=43 Identities=30% Similarity=0.429 Sum_probs=28.5
Q ss_pred EEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCC
Q ss_conf 854100202355304774067999999999998299578478885231
Q gi|254780799|r 448 IADLARMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPK 495 (806)
Q Consensus 448 v~DLakMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK 495 (806)
-.++.+==.+-|.|..|||||.-+| ||.-| + +|+.=. |.+|=+
T Consensus 25 sl~i~~Ge~~~iiG~sGsGKSTLl~-~i~gl-~--~p~sG~-I~~~g~ 67 (230)
T d1l2ta_ 25 NLNIKEGEFVSIMGPSGSGKSTMLN-IIGCL-D--KPTEGE-VYIDNI 67 (230)
T ss_dssp EEEECTTCEEEEECSTTSSHHHHHH-HHTTS-S--CCSEEE-EEETTE
T ss_pred EEEECCCCEEEEECCCCCCCCHHHH-HCCCC-C--CCCCCE-EEECCE
T ss_conf 7788499799998899998216557-50688-7--777662-699999
No 131
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=62.24 E-value=2.8 Score=18.30 Aligned_cols=54 Identities=20% Similarity=0.341 Sum_probs=31.3
Q ss_pred EEEHHH-HHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCEEEEEE
Q ss_conf 776344-6888873210058899999986641423799996577753554355411025158764
Q gi|254780799|r 593 VVVIDE-MADLMMVARKDIESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKANFPTRISFQV 656 (806)
Q Consensus 593 vviiDE-laDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ikan~p~riaf~v 656 (806)
|++-|| .+-|=..+..++.+.|.+|.+ .-|+-.|+.|..... =+.+-.||++--
T Consensus 160 iLllDEPt~~LD~~~~~~i~~~l~~l~~---~~g~tvi~vTHd~~~-------~~~~~drv~vm~ 214 (240)
T d1g2912 160 VFLMDEPLSNLDAKLRVRMRAELKKLQR---QLGVTTIYVTHDQVE-------AMTMGDRIAVMN 214 (240)
T ss_dssp EEEEECTTTTSCHHHHHHHHHHHHHHHH---HHTCEEEEEESCHHH-------HHHHCSEEEEEE
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHH---CCCCEEEEECCCHHH-------HHHHCCEEEEEE
T ss_conf 8982588765698999899999999986---369889999599999-------999699999998
No 132
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=61.60 E-value=4 Score=17.18 Aligned_cols=19 Identities=16% Similarity=0.219 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHCCEEEEEE
Q ss_conf 9999998664142379999
Q gi|254780799|r 613 AVQRLAQMARASGIHVIMA 631 (806)
Q Consensus 613 ~i~rlaq~ara~GiHli~a 631 (806)
++.-|-++=+.+.-|-|-+
T Consensus 581 sL~~L~~~L~~t~~hFIRC 599 (730)
T d1w7ja2 581 SLHLLMETLNATTPHYVRC 599 (730)
T ss_dssp HHHHHHHHHHTSEEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEE
T ss_conf 9999999983779857898
No 133
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=61.57 E-value=2.7 Score=18.40 Aligned_cols=21 Identities=29% Similarity=0.597 Sum_probs=18.5
Q ss_pred EEEEEECCCCHHHHHHHHHHH
Q ss_conf 235530477406799999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~ 476 (806)
++++.|..|+|||--+|.++-
T Consensus 7 kI~ivG~~~vGKSSLi~~~~~ 27 (169)
T d1upta_ 7 RILILGLDGAGKTTILYRLQV 27 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 999999999899999999967
No 134
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.16 E-value=2.1 Score=19.24 Aligned_cols=24 Identities=21% Similarity=0.562 Sum_probs=18.6
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHC
Q ss_conf 235530477406799999999999829
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYRM 482 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk~ 482 (806)
|++++..|||||..+. ++.++-+.
T Consensus 51 dvl~~a~TGsGKTlay---llp~l~~i 74 (218)
T d2g9na1 51 DVIAQAQSGTGKTATF---AISILQQI 74 (218)
T ss_dssp CEEEECCTTSSHHHHH---HHHHHHHC
T ss_pred CEEEECCCCHHHHHHH---HHHHHHEE
T ss_conf 8899725625445543---31022200
No 135
>d2cg4a1 a.4.5.32 (A:4-66) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=61.01 E-value=4.1 Score=17.11 Aligned_cols=50 Identities=16% Similarity=0.393 Sum_probs=43.9
Q ss_pred CCHHHHHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHH
Q ss_conf 77038999999996598500014222001177899999999977986802
Q gi|254780799|r 739 ADDLYKQAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGPA 788 (806)
Q Consensus 739 ~d~l~~~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~ 788 (806)
.|++=.+-++...+..+.|.+-|.+++.+--.-..+=|..||+.|||...
T Consensus 3 lD~~D~~IL~~L~~~~r~s~~eiA~~l~ls~~~v~~Ri~rL~~~GiI~~~ 52 (63)
T d2cg4a1 3 IDNLDRGILEALMGNARTAYAELAKQFGVSPETIHVRVEKMKQAGIITGA 52 (63)
T ss_dssp CCHHHHHHHHHHHHCTTSCHHHHHHHHTSCHHHHHHHHHHHHHHTSEEEE
T ss_pred CCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 88899999999998389999999999893999999999999988985768
No 136
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=60.74 E-value=4.1 Score=17.07 Aligned_cols=29 Identities=28% Similarity=0.340 Sum_probs=22.3
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCCH
Q ss_conf 23553047740679999999999982995
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYRMTP 484 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk~~P 484 (806)
++++..-|||||+-|---=+++-+.+..+
T Consensus 60 dvvi~a~TGsGKTlayllp~l~~l~~~~~ 88 (238)
T d1wrba1 60 DIMACAQTGSGKTAAFLIPIINHLVCQDL 88 (238)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHHHHTTCC
T ss_pred CEEEECCCCCCCCEEEHHHHHHHHHHCCC
T ss_conf 78998777777511319999999972221
No 137
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=60.69 E-value=3.1 Score=17.95 Aligned_cols=157 Identities=18% Similarity=0.320 Sum_probs=76.7
Q ss_pred EEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEE------------------------EEEECCCHH-HHH
Q ss_conf 6785410020235530477406799999999999829957847------------------------888523100-111
Q gi|254780799|r 446 PIIADLARMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCR------------------------LIMIDPKML-ELS 500 (806)
Q Consensus 446 pvv~DLakMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evk------------------------liliDPK~v-Els 500 (806)
-+-.++.+==.+-|.|..|||||..++.|-- |+ +|+.=+ ++.=||-.. .|+
T Consensus 23 ~vsl~i~~Ge~~~iiG~sGsGKSTll~~i~g--l~--~p~~G~I~~~g~~i~~~~~~~~~~~rr~ig~vfQ~~~L~p~lt 98 (242)
T d1oxxk2 23 NVNINIENGERFGILGPSGAGKTTFMRIIAG--LD--VPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLT 98 (242)
T ss_dssp EEEEEECTTCEEEEECSCHHHHHHHHHHHHT--SS--CCSEEEEEETTEEEEETTEESSCGGGSCEEEEETTSCCCTTSC
T ss_pred CEEEEECCCCEEEEECCCCCCHHHHHHHHHC--CC--CCCCCEEEECCEEEECCCHHHCCHHHCCCEEEECCCCCCCCCC
T ss_conf 4078987998999998999809999999975--86--8887459999999513731115312045147730433466665
Q ss_pred HCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHCCC--------CCHHHHH-HHHHHHHHCCCCCCCCCCCCC
Q ss_conf 027703431223343045668999999999999-999987089--------9689999-999988744786677544677
Q gi|254780799|r 501 VYDGIPNLLTPVVTNPQKAVTVLKWLVCEMEER-YQKMSKIGV--------RNIDGFN-LKVAQYHNTGKKFNRTVQTGF 570 (806)
Q Consensus 501 ~Y~~iPHLl~pVvTd~~kA~~aL~w~V~EMe~R-Y~l~a~~~v--------Rni~~yN-~k~~~~~~~~~~~~~~~~~~~ 570 (806)
+|+.|-- |. ...+|--.|+++| .+++...|. +.+.|=. +|+.-|++-
T Consensus 99 v~eni~~---~l--------~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~p~~LSGGqkQRvaiARaL------------ 155 (242)
T d1oxxk2 99 AFENIAF---PL--------TNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGAQQQRVALARAL------------ 155 (242)
T ss_dssp HHHHHHG---GG--------TTSSCCHHHHHHHHHHHHHHTTCGGGTTSCGGGSCHHHHHHHHHHHHH------------
T ss_pred HHHHHHH---HH--------HHHCCCHHHHHHHHHHHHHHCCHHHHHHCCHHHCCHHHHHHHHHHHHH------------
T ss_conf 7777665---56--------761379999999999998665917666489545999998589987577------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEHHH-HHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCC
Q ss_conf 6545432223322323469868776344-688887321005889999998664142379999657775355435541102
Q gi|254780799|r 571 DRKTGEAIYETEHFDFQHMPYIVVVIDE-MADLMMVARKDIESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKANFP 649 (806)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~lp~ivviiDE-laDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ikan~p 649 (806)
-.=|- +++-|| .+-|=..+..++...|.+| .+.-|+-+|++|..+.. =+-+-
T Consensus 156 ----------------~~~P~-llllDEPt~~LD~~~~~~i~~~i~~l---~~~~g~tvi~vTHd~~~-------~~~~~ 208 (242)
T d1oxxk2 156 ----------------VKDPS-LLLLDEPFSNLDARMRDSARALVKEV---QSRLGVTLLVVSHDPAD-------IFAIA 208 (242)
T ss_dssp ----------------TTCCS-EEEEESTTTTSCGGGHHHHHHHHHHH---HHHHCCEEEEEESCHHH-------HHHHC
T ss_pred ----------------HHCCC-CEEECCCCCCCCHHHHHHHHHHHHHH---HHCCCCEEEEEECCHHH-------HHHHC
T ss_conf ----------------60466-14544786679989988998999999---86359879999799999-------99969
Q ss_pred CEEEEEE
Q ss_conf 5158764
Q gi|254780799|r 650 TRISFQV 656 (806)
Q Consensus 650 ~riaf~v 656 (806)
.||++=.
T Consensus 209 dri~vm~ 215 (242)
T d1oxxk2 209 DRVGVLV 215 (242)
T ss_dssp SEEEEEE
T ss_pred CEEEEEE
T ss_conf 9999998
No 138
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.65 E-value=2.2 Score=19.04 Aligned_cols=24 Identities=25% Similarity=0.531 Sum_probs=18.3
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHC
Q ss_conf 235530477406799999999999829
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYRM 482 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk~ 482 (806)
|+++..-|||||+.|- .+.++.+.
T Consensus 40 dvl~~A~TGsGKTla~---~lp~l~~~ 63 (207)
T d1t6na_ 40 DVLCQAKSGMGKTAVF---VLATLQQL 63 (207)
T ss_dssp CEEEECCTTSCHHHHH---HHHHHHHC
T ss_pred CEEEEECCCCCCCCCC---CCCEEEEE
T ss_conf 8577722333212001---34403210
No 139
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=60.48 E-value=1.4 Score=20.68 Aligned_cols=22 Identities=27% Similarity=0.539 Sum_probs=18.5
Q ss_pred EEEEEECCCCHHHHHHHHHHHH
Q ss_conf 2355304774067999999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILS 477 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~S 477 (806)
.+.+.|-+|+|||--+|++.-.
T Consensus 2 kI~liG~~n~GKSSLin~l~g~ 23 (160)
T d1xzpa2 2 RMVIVGKPNVGKSTLLNRLLNE 23 (160)
T ss_dssp EEEEECCHHHHTCHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 8999999999999999999589
No 140
>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}
Probab=60.18 E-value=3.1 Score=17.93 Aligned_cols=22 Identities=9% Similarity=-0.067 Sum_probs=18.9
Q ss_pred EEE-EECCCCHHHHHHHHHHHHH
Q ss_conf 588-8334898899999999971
Q gi|254780799|r 690 QRI-HGPFVSDIEVEKVVSHLKT 711 (806)
Q Consensus 690 ~r~-~g~~v~~~ev~~v~~~~~~ 711 (806)
.|| .+.|++++||+++++++|+
T Consensus 332 ~Ris~~~~~t~edV~~li~~l~e 354 (360)
T d1bjna_ 332 MRASIYNAMPLEGVKALTDFMVE 354 (360)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHH
T ss_conf 88983488999999999999999
No 141
>d2hr3a1 a.4.5.28 (A:2-146) Probable transcriptional regulator PA3067 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=60.09 E-value=3.1 Score=17.97 Aligned_cols=57 Identities=14% Similarity=0.144 Sum_probs=38.8
Q ss_pred HHHHHHHHC-CCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHHH-CCCCCEEEECHH
Q ss_conf 999999965-985000142220011778999999999779868022-788726731712
Q gi|254780799|r 745 QAVDIVLRD-NKASISYIQRRLGIGYNRAASIIENMEEKGVIGPAS-STGKREILISSM 801 (806)
Q Consensus 745 ~a~~~v~~~-~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~~-g~~~r~vl~~~~ 801 (806)
.++..+... +..+.+-|-+++.+-...+.|+|+.||.+|+|--.. ....|.+++.-.
T Consensus 38 ~vL~~L~~~~g~~t~~~La~~~~~~~~~vs~~i~~L~~~glv~r~~~~~DrR~~~i~LT 96 (145)
T d2hr3a1 38 VVLGAIDRLGGDVTPSELAAAERMRSSNLAALLRELERGGLIVRHADPQDGRRTRVSLS 96 (145)
T ss_dssp HHHHHHHHTTSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEC------CCEEEEC
T ss_pred HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCC
T ss_conf 99999998599979999999979898899999999987698676327540157773367
No 142
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=59.94 E-value=1.1 Score=21.23 Aligned_cols=45 Identities=36% Similarity=0.490 Sum_probs=29.3
Q ss_pred EEECCCCHHHHHHHHHHHHHHHH------------CCHHHEEEE------EEC-CCHHHHHHCC
Q ss_conf 53047740679999999999982------------995784788------852-3100111027
Q gi|254780799|r 459 IAGTTGSGKSVAINTMILSLLYR------------MTPAQCRLI------MID-PKMLELSVYD 503 (806)
Q Consensus 459 IAGtTGSGKSV~iN~iI~SlLyk------------~~P~evkli------liD-PK~vEls~Y~ 503 (806)
++|..|.|||--||+++=..-.+ +|-...+|+ +|| |=+=||.+.+
T Consensus 102 l~G~SGVGKSSLiN~L~~~~~~~t~~vs~~~~rGrHTTt~~~l~~~~gg~iiDTPG~r~~~l~~ 165 (231)
T d1t9ha2 102 FAGQSGVGKSSLLNAISPELGLRTNEISEHLGRGKHTTRHVELIHTSGGLVADTPGFSSLEFTD 165 (231)
T ss_dssp EEESHHHHHHHHHHHHCC-------------------CCCCCEEEETTEEEESSCSCSSCCCTT
T ss_pred EECCCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCC
T ss_conf 9877873487898751517676403555335897124434788862797899787666665655
No 143
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=59.88 E-value=2.9 Score=18.19 Aligned_cols=21 Identities=33% Similarity=0.523 Sum_probs=15.8
Q ss_pred CCC-EEEEEECCCCHHHHHHHH
Q ss_conf 020-235530477406799999
Q gi|254780799|r 453 RMP-HLLIAGTTGSGKSVAINT 473 (806)
Q Consensus 453 kMP-HLLIAGtTGSGKSV~iN~ 473 (806)
.|+ =+-|.|..|||||...|.
T Consensus 1 ~mk~iIgitG~igSGKStv~~~ 22 (208)
T d1vhta_ 1 SLRYIVALTGGIGSGKSTVANA 22 (208)
T ss_dssp CCCEEEEEECCTTSCHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHH
T ss_conf 9887999789886889999999
No 144
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=59.67 E-value=4.3 Score=16.95 Aligned_cols=33 Identities=24% Similarity=0.312 Sum_probs=22.4
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHH--CCHHHEE
Q ss_conf 23553047740679999999999982--9957847
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYR--MTPAQCR 488 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk--~~P~evk 488 (806)
++||-|-=||||+.-+=.-|.-||++ .+|+++-
T Consensus 16 ~~lI~g~aGTGKTt~l~~rv~~ll~~~~~~~~~IL 50 (306)
T d1uaaa1 16 PCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIA 50 (306)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHHHHHHCCCGGGEE
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHEE
T ss_conf 98999628843899999999999995699955789
No 145
>d1mkma1 a.4.5.33 (A:1-75) Transcriptional regulator IclR, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=59.56 E-value=4.3 Score=16.93 Aligned_cols=44 Identities=20% Similarity=0.370 Sum_probs=37.7
Q ss_pred HHHHHHHHCCC-EEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHH
Q ss_conf 99999996598-500014222001177899999999977986802
Q gi|254780799|r 745 QAVDIVLRDNK-ASISYIQRRLGIGYNRAASIIENMEEKGVIGPA 788 (806)
Q Consensus 745 ~a~~~v~~~~~-~s~s~lqr~~~igy~raar~~~~~e~~giv~~~ 788 (806)
+.++++.+++. .|.|-|.+++.+--+.+-|++..|++.|.|-..
T Consensus 9 ~IL~~~a~~~~~~s~~eia~~~~~~~st~~rll~tL~~~g~l~~~ 53 (75)
T d1mkma1 9 EILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRK 53 (75)
T ss_dssp HHHHHHHHCSSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEC
T ss_pred HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEC
T ss_conf 999999857999899999999791999999999999988998889
No 146
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=59.38 E-value=1.7 Score=19.84 Aligned_cols=21 Identities=33% Similarity=0.725 Sum_probs=16.4
Q ss_pred CCEEEEEECCCCHHHHHHHHH
Q ss_conf 202355304774067999999
Q gi|254780799|r 454 MPHLLIAGTTGSGKSVAINTM 474 (806)
Q Consensus 454 MPHLLIAGtTGSGKSV~iN~i 474 (806)
||-.+|.|.-|||||---+.+
T Consensus 4 ~~~I~i~G~pGsGKTTia~~L 24 (173)
T d1rkba_ 4 LPNILLTGTPGVGKTTLGKEL 24 (173)
T ss_dssp CCCEEEECSTTSSHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHH
T ss_conf 897989899999989999999
No 147
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=58.89 E-value=3.1 Score=18.02 Aligned_cols=19 Identities=37% Similarity=0.656 Sum_probs=13.3
Q ss_pred CCEEE-EEECCCCHHHHHHH
Q ss_conf 20235-53047740679999
Q gi|254780799|r 454 MPHLL-IAGTTGSGKSVAIN 472 (806)
Q Consensus 454 MPHLL-IAGtTGSGKSV~iN 472 (806)
|.=+. |.|..|||||...+
T Consensus 1 M~~iIgITG~igSGKStv~~ 20 (205)
T d1jjva_ 1 MTYIVGLTGGIGSGKTTIAN 20 (205)
T ss_dssp CCEEEEEECSTTSCHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHH
T ss_conf 96899988888788999999
No 148
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=58.78 E-value=3.3 Score=17.81 Aligned_cols=23 Identities=26% Similarity=0.544 Sum_probs=18.9
Q ss_pred CCEEEEEECCCCHHHHHHHHHHH
Q ss_conf 20235530477406799999999
Q gi|254780799|r 454 MPHLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 454 MPHLLIAGtTGSGKSV~iN~iI~ 476 (806)
|-.++|-|..|+|||-.||.++.
T Consensus 2 ~~Kv~vvG~~~vGKSSLi~~l~~ 24 (184)
T d1vg8a_ 2 LLKVIILGDSGVGKTSLMNQYVN 24 (184)
T ss_dssp EEEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEEECCCCCCHHHHHHHHHH
T ss_conf 79999999999198999999971
No 149
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=58.77 E-value=3.8 Score=17.35 Aligned_cols=44 Identities=25% Similarity=0.408 Sum_probs=30.1
Q ss_pred EEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCC
Q ss_conf 67854100202355304774067999999999998299578478885231
Q gi|254780799|r 446 PIIADLARMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPK 495 (806)
Q Consensus 446 pvv~DLakMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK 495 (806)
++-.++.+==.+-+.|..|||||--+|+|. - ..|++-. |.++=|
T Consensus 17 ~isl~I~~Gei~~iiG~nGaGKSTLl~~l~-G----l~~~~G~-I~~~g~ 60 (231)
T d1l7vc_ 17 PLSGEVRAGEILHLVGPNGAGKSTLLARMA-G----MTSGKGS-IQFAGQ 60 (231)
T ss_dssp SEEEEEETTCEEECBCCTTSSHHHHHHHHH-T----SCCCSSE-EEESSS
T ss_pred CEEEEECCCCEEEEECCCCCCHHHHHHHHH-C----CCCCCEE-EEECCE
T ss_conf 888899489899999899980999999994-8----8799559-999999
No 150
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=58.19 E-value=3.3 Score=17.75 Aligned_cols=22 Identities=27% Similarity=0.448 Sum_probs=17.6
Q ss_pred CCEEEEEECCCCHHHHHHHHHH
Q ss_conf 2023553047740679999999
Q gi|254780799|r 454 MPHLLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 454 MPHLLIAGtTGSGKSV~iN~iI 475 (806)
|.=.+|.|..|||||--+|.+-
T Consensus 1 mkiivi~G~~GsGKTT~~~~La 22 (194)
T d1nksa_ 1 MKIGIVTGIPGVGKSTVLAKVK 22 (194)
T ss_dssp CEEEEEEECTTSCHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHH
T ss_conf 9199998989989899999999
No 151
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=58.17 E-value=1.8 Score=19.81 Aligned_cols=24 Identities=21% Similarity=0.205 Sum_probs=18.2
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf 355304774067999999999998
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLLY 480 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlLy 480 (806)
.||+|.+|||||-....++.+.+.
T Consensus 37 ~li~G~pGsGKT~l~lq~~~~~~~ 60 (251)
T d1szpa2 37 TELFGEFRTGKSQLCHTLAVTCQI 60 (251)
T ss_dssp EEEEESTTSSHHHHHHHHTTTTTS
T ss_pred EEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 999838999889999999998631
No 152
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=57.84 E-value=1.5 Score=20.39 Aligned_cols=55 Identities=24% Similarity=0.357 Sum_probs=31.9
Q ss_pred EECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC---------------CH----HHEEEEEECCCHHHHHHCCCC
Q ss_conf 5410020235530477406799999999999829---------------95----784788852310011102770
Q gi|254780799|r 449 ADLARMPHLLIAGTTGSGKSVAINTMILSLLYRM---------------TP----AQCRLIMIDPKMLELSVYDGI 505 (806)
Q Consensus 449 ~DLakMPHLLIAGtTGSGKSV~iN~iI~SlLyk~---------------~P----~evkliliDPK~vEls~Y~~i 505 (806)
.++.+==.+-|-|.+|||||-.++.|.- ||+. ++ ..+-++.=||-....|+++.|
T Consensus 39 l~i~~Ge~vaivG~sGsGKSTLl~ll~g--l~~p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Ti~eNi 112 (255)
T d2hyda1 39 LSIEKGETVAFVGMSGGGKSTLINLIPR--FYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI 112 (255)
T ss_dssp EEECTTCEEEEECSTTSSHHHHHTTTTT--SSCCSEEEEEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHH
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHHH--CCCCCCCCCCCCCEECCCCCHHHHHHEEEEEECCCCCCCCCHHHHH
T ss_conf 9983998999988999809999999971--2786300015399875307888863414565101568998799998
No 153
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=57.51 E-value=3 Score=18.05 Aligned_cols=22 Identities=32% Similarity=0.501 Sum_probs=15.7
Q ss_pred CCCE-EEEEECCCCHHHHHHHHH
Q ss_conf 0202-355304774067999999
Q gi|254780799|r 453 RMPH-LLIAGTTGSGKSVAINTM 474 (806)
Q Consensus 453 kMPH-LLIAGtTGSGKSV~iN~i 474 (806)
..|. +++.|-.|||||-....+
T Consensus 12 ~~p~liil~G~pGsGKST~a~~l 34 (172)
T d1yj5a2 12 PNPEVVVAVGFPGAGKSTFIQEH 34 (172)
T ss_dssp SSCCEEEEECCTTSSHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHH
T ss_conf 99989999899999899999999
No 154
>d1p4xa1 a.4.5.28 (A:1-125) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=57.48 E-value=4.2 Score=17.01 Aligned_cols=58 Identities=17% Similarity=0.175 Sum_probs=43.0
Q ss_pred HHHHHHHCCC--EEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHC-CCCCEEEECHHHH
Q ss_conf 9999996598--50001422200117789999999997798680227-8872673171253
Q gi|254780799|r 746 AVDIVLRDNK--ASISYIQRRLGIGYNRAASIIENMEEKGVIGPASS-TGKREILISSMEE 803 (806)
Q Consensus 746 a~~~v~~~~~--~s~s~lqr~~~igy~raar~~~~~e~~giv~~~~g-~~~r~vl~~~~~~ 803 (806)
++..+..... .|.+-|.+++.+.-+...|+++.||+.|.|--... .-.|.+++.-.++
T Consensus 39 iL~~l~~~~~~~~t~~eia~~~~~~~~~vs~~l~~L~~~g~v~r~~~~~D~R~~~i~lT~~ 99 (125)
T d1p4xa1 39 LLTYLFHQQENTLPFKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRSKIDERNTYISISEE 99 (125)
T ss_dssp HHHHHHSCSCSEEEHHHHHHHSSSCGGGTHHHHHHHHHTTSCEEEECSSSTTSEEEECCHH
T ss_pred HHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCCEEEEEECHH
T ss_conf 9999998436986799999996888243999999999889810212358987379888999
No 155
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=57.47 E-value=3.3 Score=17.79 Aligned_cols=20 Identities=25% Similarity=0.431 Sum_probs=17.7
Q ss_pred EEEEECCCCHHHHHHHHHHH
Q ss_conf 35530477406799999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~ 476 (806)
+++-|..|+|||--+|.++-
T Consensus 3 I~liG~~nvGKSSLln~l~~ 22 (166)
T d2qtvb1 3 LLFLGLDNAGKTTLLHMLKN 22 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHC
T ss_conf 99999999999999999958
No 156
>d1vrba1 b.82.2.11 (A:8-326) Putative asparaginyl hydroxylase YxbC {Bacillus subtilis [TaxId: 1423]}
Probab=57.41 E-value=2 Score=19.39 Aligned_cols=39 Identities=21% Similarity=0.277 Sum_probs=21.2
Q ss_pred HHHCCCCCEEEECCC-CCEE-------EEEECCCCHHHHHHHHHHHH
Q ss_conf 786588754773689-8325-------88833489889999999997
Q gi|254780799|r 672 EQLLGQGDMLYMTGG-GRVQ-------RIHGPFVSDIEVEKVVSHLK 710 (806)
Q Consensus 672 e~Llg~gdml~~~~~-~~~~-------r~~g~~v~~~ev~~v~~~~~ 710 (806)
|--|.-|||||+|+| -+=. =++--|....-.+-+.+++.
T Consensus 200 ~~~L~pGDvLYiP~gw~H~v~s~~~sis~sv~f~~~~~~d~~~~~~~ 246 (319)
T d1vrba1 200 IVNLTPGTMLYLPRGLWHSTKSDQATLALNITFGQPAWLDLMLAALR 246 (319)
T ss_dssp EEEECTTCEEEECTTCEEEEECSSCEEEEEEEECCCBHHHHHHHHHH
T ss_pred EEEECCCCEEEECCCCEEEEEECCCEEEEEEEECCCCHHHHHHHHHH
T ss_conf 99977987898279954885755872799997327978999999999
No 157
>d2fxaa1 a.4.5.28 (A:6-167) Protease production regulatory protein Hpr {Bacillus subtilis [TaxId: 1423]}
Probab=57.18 E-value=2.8 Score=18.35 Aligned_cols=30 Identities=30% Similarity=0.308 Sum_probs=9.7
Q ss_pred EEEEHHHHHHCCCHHHHHHHHHHHHHCCCC
Q ss_conf 500014222001177899999999977986
Q gi|254780799|r 756 ASISYIQRRLGIGYNRAASIIENMEEKGVI 785 (806)
Q Consensus 756 ~s~s~lqr~~~igy~raar~~~~~e~~giv 785 (806)
.|+|=|=+++.+-=+-..|+++.||++|.|
T Consensus 56 ~t~~~la~~~~l~~~tvs~~i~rL~~~gli 85 (162)
T d2fxaa1 56 ASISEIAKFGVMHVSTAFNFSKKLEERGYL 85 (162)
T ss_dssp EEHHHHHHHTTCCHHHHHHHHHHHHHHTSE
T ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHCCCC
T ss_conf 189999999769940319989999977772
No 158
>d2d1ha1 a.4.5.50 (A:1-109) Hypothetical transcriptional regulator ST1889 {Sulfolobus tokodaii [TaxId: 111955]}
Probab=57.05 E-value=4.7 Score=16.64 Aligned_cols=44 Identities=5% Similarity=0.090 Sum_probs=35.8
Q ss_pred HHHHHHH-HCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHH
Q ss_conf 9999999-6598500014222001177899999999977986802
Q gi|254780799|r 745 QAVDIVL-RDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGPA 788 (806)
Q Consensus 745 ~a~~~v~-~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~ 788 (806)
+....+. ..+..|.+-|.+++.+--+...|+++.||+.|+|-..
T Consensus 25 ~iL~~L~~~~~~~t~~eLa~~~~i~~~tvs~~l~~L~~~GlV~r~ 69 (109)
T d2d1ha1 25 AVLLKMVEIEKPITSEELADIFKLSKTTVENSLKKLIELGLVVRT 69 (109)
T ss_dssp HHHHHHHHHCSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 999999976989889999999885676999999999978997985
No 159
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=56.81 E-value=3.2 Score=17.91 Aligned_cols=41 Identities=15% Similarity=0.344 Sum_probs=26.3
Q ss_pred EECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECC
Q ss_conf 5410020235530477406799999999999829957847888523
Q gi|254780799|r 449 ADLARMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDP 494 (806)
Q Consensus 449 ~DLakMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDP 494 (806)
.++.+==.+-+.|.-|||||-.+++|- .+ .+|++=+. .+|-
T Consensus 22 ~~i~~Gei~~l~G~NGsGKSTLl~~i~-gl---~~p~~G~I-~~~g 62 (200)
T d1sgwa_ 22 MTIEKGNVVNFHGPNGIGKTTLLKTIS-TY---LKPLKGEI-IYNG 62 (200)
T ss_dssp EEEETTCCEEEECCTTSSHHHHHHHHT-TS---SCCSEEEE-EETT
T ss_pred EEECCCCEEEEECCCCCHHHHHHHHHH-CC---CCCCCCEE-EECC
T ss_conf 898599899999999971999999996-62---05677889-9998
No 160
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=56.58 E-value=4.8 Score=16.58 Aligned_cols=103 Identities=16% Similarity=0.212 Sum_probs=63.6
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 35530477406799999999999829957847888523100111027703431223343045668999999999999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKMLELSVYDGIPNLLTPVVTNPQKAVTVLKWLVCEMEERYQK 536 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~vEls~Y~~iPHLl~pVvTd~~kA~~aL~w~V~EMe~RY~l 536 (806)
|.|=|.+|||||=-++++--++.-+.. +.+.++-. ......+..+.
T Consensus 39 l~l~G~~G~GKTHLl~A~~~~~~~~~~----~~~~~~~~-------------------------~~~~~~~~~~~----- 84 (213)
T d1l8qa2 39 IFIYGSVGTGKTHLLQAAGNEAKKRGY----RVIYSSAD-------------------------DFAQAMVEHLK----- 84 (213)
T ss_dssp EEEECSSSSSHHHHHHHHHHHHHHTTC----CEEEEEHH-------------------------HHHHHHHHHHH-----
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCC----CEEEECHH-------------------------HHHHHHHHHHH-----
T ss_conf 799888998399999999987446765----04884437-------------------------87999999987-----
Q ss_pred HHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCC-HHHHHHH
Q ss_conf 987089968999999998874478667754467765454322233223234698687763446888873210-0588999
Q gi|254780799|r 537 MSKIGVRNIDGFNLKVAQYHNTGKKFNRTVQTGFDRKTGEAIYETEHFDFQHMPYIVVVIDEMADLMMVARK-DIESAVQ 615 (806)
Q Consensus 537 ~a~~~vRni~~yN~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~ivviiDElaDlmm~~~~-~ve~~i~ 615 (806)
-....++.+.++. .=+++||++ -..+++ +.|..+-
T Consensus 85 -----~~~~~~~~~~~~~------------------------------------~dll~iDDi---~~i~~~~~~~~~lf 120 (213)
T d1l8qa2 85 -----KGTINEFRNMYKS------------------------------------VDLLLLDDV---QFLSGKERTQIEFF 120 (213)
T ss_dssp -----HTCHHHHHHHHHT------------------------------------CSEEEEECG---GGGTTCHHHHHHHH
T ss_pred -----CCCHHHHHHHHHH------------------------------------CCCHHHHHH---HHHCCCHHHHHHHH
T ss_conf -----1662667898762------------------------------------130101126---55058657788999
Q ss_pred HHHHHHHHCCEEEEEEECCCCC
Q ss_conf 9998664142379999657775
Q gi|254780799|r 616 RLAQMARASGIHVIMATQRPSV 637 (806)
Q Consensus 616 rlaq~ara~GiHli~aTqrPsv 637 (806)
-+=.-....|-++|+++.+|-.
T Consensus 121 ~lin~~~~~~~~iiits~~~p~ 142 (213)
T d1l8qa2 121 HIFNTLYLLEKQIILASDRHPQ 142 (213)
T ss_dssp HHHHHHHHTTCEEEEEESSCGG
T ss_pred HHHHHHHHCCCEEEEECCCCCH
T ss_conf 9999876316638995487510
No 161
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.57 E-value=3.8 Score=17.36 Aligned_cols=24 Identities=38% Similarity=0.518 Sum_probs=20.0
Q ss_pred CCE---EEEEECCCCHHHHHHHHHHHH
Q ss_conf 202---355304774067999999999
Q gi|254780799|r 454 MPH---LLIAGTTGSGKSVAINTMILS 477 (806)
Q Consensus 454 MPH---LLIAGtTGSGKSV~iN~iI~S 477 (806)
|++ +++-|..|+|||--||.++..
T Consensus 2 m~~~~Ki~lvG~~~vGKTsLi~r~~~~ 28 (171)
T d2erya1 2 MQEKYRLVVVGGGGVGKSALTIQFIQS 28 (171)
T ss_dssp CCCEEEEEEEECTTSSHHHHHHHHHHS
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHC
T ss_conf 876328999999997999999999739
No 162
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=56.49 E-value=4.8 Score=16.57 Aligned_cols=71 Identities=14% Similarity=0.168 Sum_probs=44.2
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHH----HHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf 35530477406799999999999829957847888523100----11102770343122334304566899999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKML----ELSVYDGIPNLLTPVVTNPQKAVTVLKWLVCE 529 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~v----Els~Y~~iPHLl~pVvTd~~kA~~aL~w~V~E 529 (806)
++..|-||+||+-.+-=+-.-+..+ =..|-+|=.|.-+. -|..|-.+=..-.-++.+++....+.+++...
T Consensus 13 i~lvGp~GvGKTTTiaKLA~~~~~~--g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~~~~~~~~~~~~~ 87 (207)
T d1ls1a2 13 WFLVGLQGSGKTTTAAKLALYYKGK--GRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEK 87 (207)
T ss_dssp EEEECCTTTTHHHHHHHHHHHHHHT--TCCEEEEECCSSCHHHHHHHHHHHHHHTCCEEECCTTCCHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 9998999998899999999999977--99279995443464088889999986288631112442036788889888
No 163
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=56.22 E-value=3.3 Score=17.79 Aligned_cols=37 Identities=19% Similarity=0.297 Sum_probs=24.0
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCH
Q ss_conf 23553047740679999999999982995784788852310
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKM 496 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~ 496 (806)
++||-|-+|+||+.+-.+|= ....+....++.+|...
T Consensus 25 pvlI~Ge~GtGK~~~A~~ih----~~s~~~~~~~~~~~~~~ 61 (247)
T d1ny5a2 25 PVLITGESGVGKEVVARLIH----KLSDRSKEPFVALNVAS 61 (247)
T ss_dssp CEEEECSTTSSHHHHHHHHH----HHSTTTTSCEEEEETTT
T ss_pred CEEEECCCCCCHHHHHHHHH----HHCCCCCCCCCCCHHHH
T ss_conf 78998999817999999999----96587653320210234
No 164
>d1q7sa_ c.131.1.1 (A:) Bit1 (Cgi-147) {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.74 E-value=4.9 Score=16.49 Aligned_cols=47 Identities=17% Similarity=0.382 Sum_probs=23.0
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEE------EEEECCEEEEEEEEECCCCCHHHHHH
Q ss_conf 25665457899999974248632899------84104424444432147863999997
Q gi|254780799|r 328 SPKVMQNNACTLKSVLSDFGIQGEIV------NVRPGPVITLYELEPAPGIKSSRIIG 379 (806)
Q Consensus 328 s~eeL~~nA~lLE~tL~dFGVe~~Vv------~v~pGPVVTrYEi~PApGVKvSKI~n 379 (806)
|+++|++ |.+++++.|+...++ ++-|| ++|.--|-|+|--++.+|++
T Consensus 60 ~e~~l~~----l~~~a~~~~l~~~~i~DAG~Tei~~g-t~TvlaigP~~~~~id~itg 112 (117)
T d1q7sa_ 60 DEETLIA----LLAHAKMLGLTVSLIQDAGRTQIAPG-SQTVLGIGPGPADLIDKVTG 112 (117)
T ss_dssp SHHHHHH----HHHHHHHTTCCEEEEEECSSSSEEEE-EEEEEEEEEEEHHHHHHHHT
T ss_pred CHHHHHH----HHHHHHHCCCCEEEEECCCCCCCCCC-CEEEEEECCCCHHHHHHHHC
T ss_conf 9999999----99999987998899984897503899-84899977788889889738
No 165
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=55.26 E-value=4.6 Score=16.72 Aligned_cols=10 Identities=20% Similarity=0.454 Sum_probs=4.4
Q ss_pred EEEEEECCCC
Q ss_conf 7999965777
Q gi|254780799|r 627 HVIMATQRPS 636 (806)
Q Consensus 627 Hli~aTqrPs 636 (806)
.+|++|-.|.
T Consensus 336 QviitTHs~~ 345 (369)
T g1ii8.1 336 QVILVSHDEE 345 (369)
T ss_dssp EEEEEESCGG
T ss_pred EEEEEECHHH
T ss_conf 8999963099
No 166
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=55.22 E-value=2.6 Score=18.58 Aligned_cols=21 Identities=19% Similarity=0.379 Sum_probs=17.9
Q ss_pred CCEEEEEECCCCHHHHHHHHH
Q ss_conf 202355304774067999999
Q gi|254780799|r 454 MPHLLIAGTTGSGKSVAINTM 474 (806)
Q Consensus 454 MPHLLIAGtTGSGKSV~iN~i 474 (806)
||-.-|.|-+++|||.-+|++
T Consensus 1 ~~~VaiiG~~nvGKSSLin~L 21 (185)
T d1lnza2 1 LADVGLVGFPSVGKSTLLSVV 21 (185)
T ss_dssp CCCEEEESSTTSSHHHHHHHS
T ss_pred CCEEEEECCCCCCHHHHHHHH
T ss_conf 986999899998799999999
No 167
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=55.19 E-value=3.2 Score=17.85 Aligned_cols=19 Identities=26% Similarity=0.501 Sum_probs=14.3
Q ss_pred EEECCCCHHHHHHHHHHHH
Q ss_conf 5304774067999999999
Q gi|254780799|r 459 IAGTTGSGKSVAINTMILS 477 (806)
Q Consensus 459 IAGtTGSGKSV~iN~iI~S 477 (806)
|-|.-|||||-.+..+.--
T Consensus 5 ieG~dGsGKST~~~~L~~~ 23 (208)
T d1gsia_ 5 IEGVDGAGKRTLVEKLSGA 23 (208)
T ss_dssp EECSTTSSHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHH
T ss_conf 9899878999999999999
No 168
>d1z6ra1 a.4.5.63 (A:12-81) Mlc protein N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=55.09 E-value=5 Score=16.41 Aligned_cols=43 Identities=12% Similarity=0.083 Sum_probs=38.7
Q ss_pred HHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 9999999965985000142220011778999999999779868
Q gi|254780799|r 744 KQAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIG 786 (806)
Q Consensus 744 ~~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~ 786 (806)
....+++.+.+..|-+-|-+.+.+--.-..++++.|+++|+|-
T Consensus 8 ~~Il~~i~~~g~~sr~eLa~~~gLS~~Tvs~iv~~L~~~glv~ 50 (70)
T d1z6ra1 8 GAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVHEMLEAHLVQ 50 (70)
T ss_dssp HHHHHHHHSSCSCCHHHHHHHTTCCHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEE
T ss_conf 9999999994992899999998949999999999999889978
No 169
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.92 E-value=2.4 Score=18.81 Aligned_cols=17 Identities=24% Similarity=0.464 Sum_probs=14.0
Q ss_pred CEEEEEECCCCHHHHHH
Q ss_conf 02355304774067999
Q gi|254780799|r 455 PHLLIAGTTGSGKSVAI 471 (806)
Q Consensus 455 PHLLIAGtTGSGKSV~i 471 (806)
|-+.|.|..|||||---
T Consensus 2 ~iI~i~GppGSGKsT~a 18 (194)
T d1teva_ 2 LVVFVLGGPGAGKGTQC 18 (194)
T ss_dssp EEEEEECCTTSSHHHHH
T ss_pred CEEEEECCCCCCHHHHH
T ss_conf 39999799999989999
No 170
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=54.84 E-value=4.1 Score=17.03 Aligned_cols=20 Identities=35% Similarity=0.569 Sum_probs=14.8
Q ss_pred EEEEEECCCCHHHHHHHHHH
Q ss_conf 23553047740679999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI 475 (806)
-+|+.|.-|+|||-+...+|
T Consensus 17 gvli~G~sG~GKS~lal~l~ 36 (177)
T d1knxa2 17 GVLLTGRSGIGKSECALDLI 36 (177)
T ss_dssp EEEEEESSSSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
T ss_conf 99998189999899999999
No 171
>d1jmxa1 a.3.1.7 (A:2-85) Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 {Pseudomonas putida [TaxId: 303]}
Probab=54.67 E-value=2.7 Score=18.49 Aligned_cols=25 Identities=28% Similarity=0.363 Sum_probs=20.6
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHCC
Q ss_conf 2588833489889999999997128
Q gi|254780799|r 689 VQRIHGPFVSDIEVEKVVSHLKTQG 713 (806)
Q Consensus 689 ~~r~~g~~v~~~ev~~v~~~~~~q~ 713 (806)
.+..||+.++|+|...|++|+.++.
T Consensus 43 M~~~~Ga~l~~~e~~~Iv~YLa~~y 67 (84)
T d1jmxa1 43 MQVMHGLQISDDDRRTLVKYLADKQ 67 (84)
T ss_dssp HHHHHCCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHC
T ss_conf 9998499999899999999999975
No 172
>d1cnoa_ a.3.1.1 (A:) Cytochrome c552 {Pseudomonas nautica [TaxId: 2743]}
Probab=54.66 E-value=4.1 Score=17.07 Aligned_cols=21 Identities=14% Similarity=0.251 Sum_probs=16.9
Q ss_pred CCCCHHHHHHHHHHHHHCCCC
Q ss_conf 348988999999999712897
Q gi|254780799|r 695 PFVSDIEVEKVVSHLKTQGEA 715 (806)
Q Consensus 695 ~~v~~~ev~~v~~~~~~q~~~ 715 (806)
.-+||+||..|++|+.+|..|
T Consensus 65 ~~Lsd~di~~laaYi~slp~~ 85 (86)
T d1cnoa_ 65 TALSDADIANLAAYYASNPAA 85 (86)
T ss_dssp TTCCHHHHHHHHHHHHHSCTT
T ss_pred CCCCHHHHHHHHHHHHHCCCC
T ss_conf 249999999999999958999
No 173
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=54.49 E-value=4.6 Score=16.69 Aligned_cols=45 Identities=24% Similarity=0.440 Sum_probs=29.8
Q ss_pred EEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCH
Q ss_conf 78541002023553047740679999999999982995784788852310
Q gi|254780799|r 447 IIADLARMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKM 496 (806)
Q Consensus 447 vv~DLakMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~ 496 (806)
+-.++.+==.+-+-|..|||||..+| ||+-|+ +|+.=+ |.+|=|-
T Consensus 25 vsl~v~~Ge~~~liGpsGaGKSTLl~-~i~Gl~---~p~sG~-I~i~g~~ 69 (239)
T d1v43a3 25 LNLTIKDGEFLVLLGPSGCGKTTTLR-MIAGLE---EPTEGR-IYFGDRD 69 (239)
T ss_dssp EEEEECTTCEEEEECCTTSSHHHHHH-HHHTSS---CCSEEE-EEETTEE
T ss_pred EEEEECCCCEEEEECCCCCHHHHHHH-HHHCCC---CCCCCE-EEECCEE
T ss_conf 06788799899999999982999999-997589---998787-9991641
No 174
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=54.23 E-value=3.1 Score=17.95 Aligned_cols=27 Identities=37% Similarity=0.452 Sum_probs=20.0
Q ss_pred ECCCCCEEEEEECCCCHHHHHHHHHHH
Q ss_conf 410020235530477406799999999
Q gi|254780799|r 450 DLARMPHLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 450 DLakMPHLLIAGtTGSGKSV~iN~iI~ 476 (806)
++.+=-.+-+.|..|||||..+|+|.-
T Consensus 26 ~v~~Gei~~liG~nGaGKSTLl~~i~G 52 (254)
T d1g6ha_ 26 SVNKGDVTLIIGPNGSGKSTLINVITG 52 (254)
T ss_dssp EEETTCEEEEECSTTSSHHHHHHHHTT
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHC
T ss_conf 988997999999999849999999977
No 175
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=54.14 E-value=4.3 Score=16.90 Aligned_cols=16 Identities=44% Similarity=0.675 Sum_probs=13.4
Q ss_pred EEECCCCHHHHHHHHH
Q ss_conf 5304774067999999
Q gi|254780799|r 459 IAGTTGSGKSVAINTM 474 (806)
Q Consensus 459 IAGtTGSGKSV~iN~i 474 (806)
|+|.-|||||...+-+
T Consensus 8 itG~~gSGKstva~~l 23 (191)
T d1uf9a_ 8 ITGNIGSGKSTVAALL 23 (191)
T ss_dssp EEECTTSCHHHHHHHH
T ss_pred EECCCCCCHHHHHHHH
T ss_conf 9898877899999999
No 176
>d1lnwa_ a.4.5.28 (A:) MexR repressor {Pseudomonas aeruginosa [TaxId: 287]}
Probab=54.11 E-value=5.2 Score=16.30 Aligned_cols=54 Identities=7% Similarity=0.204 Sum_probs=34.9
Q ss_pred HHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHHH-CCCCCEEEE
Q ss_conf 999999965985000142220011778999999999779868022-788726731
Q gi|254780799|r 745 QAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGPAS-STGKREILI 798 (806)
Q Consensus 745 ~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~~-g~~~r~vl~ 798 (806)
..+.++-..+..+.+-|-+++.+-=....|+++.||++|+|--.. ..-+|.+.+
T Consensus 40 ~vL~~l~~~~~~t~~~la~~l~~~~~~vsr~l~~L~~~G~v~r~~~~~D~R~~~l 94 (141)
T d1lnwa_ 40 HVLKLIDEQRGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQL 94 (141)
T ss_dssp HHHHHHHSSTTCBHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEECSSSSSSEEE
T ss_pred HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEECCCCCCCCHHH
T ss_conf 9999999879989999999978457379999999998323011034788761112
No 177
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=54.10 E-value=5.2 Score=16.30 Aligned_cols=163 Identities=22% Similarity=0.276 Sum_probs=75.4
Q ss_pred EEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHH-HHHH-------------CCCCHHHHCCC
Q ss_conf 785410020235530477406799999999999829957847888523100-1110-------------27703431223
Q gi|254780799|r 447 IIADLARMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKML-ELSV-------------YDGIPNLLTPV 512 (806)
Q Consensus 447 vv~DLakMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~v-Els~-------------Y~~iPHLl~pV 512 (806)
+-.++.+==-+-|.|-.|||||.-++.|-- |. +|+.=+ |.+|=+-+ +++. |.+ |+|+ |-
T Consensus 24 vsl~i~~Ge~~~iiG~sGsGKSTLl~~i~G--l~--~p~sG~-I~~~g~~i~~~~~~~~~~~rr~ig~VfQ~-~~l~-~~ 96 (240)
T d3dhwc1 24 VSLHVPAGQIYGVIGASGAGKSTLIRCVNL--LE--RPTEGS-VLVDGQELTTLSESELTKARRQIGMIFQH-FNLL-SS 96 (240)
T ss_dssp EEEEECSSCEEEEEESTTSSHHHHHHHHTT--SS--CCSEEE-EEETTEEECTTCHHHHHHHHHHEEECCSS-CCCC-TT
T ss_pred EEEEECCCCEEEEECCCCCCHHHHHHHHCC--CC--CCCCCC-EEECCEEEEECCHHHHHHHHCCCCCCCCC-CCCC-CC
T ss_conf 057886997999989998988899998758--86--366773-28867685208755511554166430225-2227-99
Q ss_pred CCCHHHHHHHH---HHHHHHHHHH-HHHHHHCC--------CCCHHHHH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 34304566899---9999999999-99998708--------99689999-999988744786677544677654543222
Q gi|254780799|r 513 VTNPQKAVTVL---KWLVCEMEER-YQKMSKIG--------VRNIDGFN-LKVAQYHNTGKKFNRTVQTGFDRKTGEAIY 579 (806)
Q Consensus 513 vTd~~kA~~aL---~w~V~EMe~R-Y~l~a~~~--------vRni~~yN-~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (806)
-|=-+....+| +|--+|+++| .++|..+| ++.+.|=+ +|+.-|++
T Consensus 97 ~tv~eni~~~l~~~~~~~~~~~~~v~~~L~~vgL~~~~~~~~~~LSGG~~QRvaiAra---------------------- 154 (240)
T d3dhwc1 97 RTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARA---------------------- 154 (240)
T ss_dssp SBHHHHHHHHHHTTTCCTTHHHHHHHHHHHHHSTTTTTSSCBSCCCHHHHHHHHHHHH----------------------
T ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHCCHHHHHHHHHHHH----------------------
T ss_conf 6499999999998499989999999999997699035548943499999989998640----------------------
Q ss_pred CCCCCCCCCCCEEEEEHHH-HHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCEEEEE
Q ss_conf 3322323469868776344-688887321005889999998664142379999657775355435541102515876
Q gi|254780799|r 580 ETEHFDFQHMPYIVVVIDE-MADLMMVARKDIESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKANFPTRISFQ 655 (806)
Q Consensus 580 ~~~~~~~~~lp~ivviiDE-laDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ikan~p~riaf~ 655 (806)
+-.-|- +++-|| .+-|=..+.++|-+.|.+| .+--|+-.|++|....+ =+.+--||++=
T Consensus 155 ------L~~~P~-lLllDEPt~~LD~~~~~~i~~~l~~l---~~~~g~tvi~vTHdl~~-------~~~~~dri~vl 214 (240)
T d3dhwc1 155 ------LASNPK-VLLCDEATSALDPATTRSILELLKDI---NRRLGLTILLITHEMDV-------VKRICDCVAVI 214 (240)
T ss_dssp ------HHTCCS-EEEEESGGGSSCHHHHHHHHHHHHHH---HHHHCCEEEEEBSCHHH-------HHHHCSEEEEE
T ss_pred ------HCCCCC-EEEECCCCCCCCHHHHHHHHHHHHHH---HHCCCCEEEEECCCHHH-------HHHHCCEEEEE
T ss_conf ------105898-68744655658988856799999999---86469789998389999-------99869999999
No 178
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=54.04 E-value=2.5 Score=18.74 Aligned_cols=50 Identities=12% Similarity=0.183 Sum_probs=24.6
Q ss_pred HHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCEEEEEECCCCCC-HHHCCCCCHHHH
Q ss_conf 999986641423799996577753554355411025158764586642-123388645786
Q gi|254780799|r 615 QRLAQMARASGIHVIMATQRPSVDVITGTIKANFPTRISFQVSSKIDS-RTILGEQGAEQL 674 (806)
Q Consensus 615 ~rlaq~ara~GiHli~aTqrPsvdvitg~ikan~p~riaf~v~s~~dS-rtild~~gae~L 674 (806)
.+.+++.|..+-+..=+.-.-|--|+|=.|+.. ++..| =++.|-.|.|+.
T Consensus 222 l~~g~~~R~~~~T~~N~~SSRSH~i~~i~i~~~----------~~~~~~l~~VDLAGsEr~ 272 (362)
T d1v8ka_ 222 INMGSACRTSGQTFANSNSSRSHACFQILLRTK----------GRLHGKFSLVDLAGNERG 272 (362)
T ss_dssp HHHHHHTCC--------CCCSSEEEEEEEEESS----------SSEEEEEEEEECCCCCC-
T ss_pred HHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEC----------CEEEEEEEEEECCCCCCC
T ss_conf 741454543024567456751005799999855----------600136765202566554
No 179
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=54.00 E-value=4 Score=17.12 Aligned_cols=22 Identities=23% Similarity=0.369 Sum_probs=19.1
Q ss_pred EEEEEECCCCHHHHHHHHHHHH
Q ss_conf 2355304774067999999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILS 477 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~S 477 (806)
++|+.|-+|+||+...+++--.
T Consensus 42 ~vLL~GppGtGKT~la~alA~~ 63 (246)
T d1d2na_ 42 SVLLEGPPHSGKTALAAKIAEE 63 (246)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 7998896999889999998620
No 180
>d1fcdc1 a.3.1.4 (C:1-80) Flavocytochrome c sulfide dehydrogenase, FCSD, cytochrome subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}
Probab=53.94 E-value=4.4 Score=16.83 Aligned_cols=18 Identities=28% Similarity=0.213 Sum_probs=15.8
Q ss_pred CCCHHHHHHHHHHHHHCC
Q ss_conf 489889999999997128
Q gi|254780799|r 696 FVSDIEVEKVVSHLKTQG 713 (806)
Q Consensus 696 ~v~~~ev~~v~~~~~~q~ 713 (806)
-.||+||..|+.|+.+|.
T Consensus 60 ~Lsd~ei~~la~Y~~sq~ 77 (80)
T d1fcdc1 60 GYSTADFEKMAGYFKQQT 77 (80)
T ss_dssp TSCHHHHHHHHHHHHTSC
T ss_pred CCCHHHHHHHHHHHHHCC
T ss_conf 499999999999998679
No 181
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=53.92 E-value=4.4 Score=16.85 Aligned_cols=22 Identities=14% Similarity=0.296 Sum_probs=18.5
Q ss_pred CEEEEEECCCCHHHHHHHHHHH
Q ss_conf 0235530477406799999999
Q gi|254780799|r 455 PHLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 455 PHLLIAGtTGSGKSV~iN~iI~ 476 (806)
=++++-|..|+|||--+|.++.
T Consensus 3 ~Kv~liG~~~vGKTsLl~~~~~ 24 (165)
T d1z06a1 3 FKIIVIGDSNVGKTCLTYRFCA 24 (165)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHH
T ss_conf 9999999999298999999973
No 182
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=53.87 E-value=2.4 Score=18.84 Aligned_cols=15 Identities=40% Similarity=0.638 Sum_probs=11.1
Q ss_pred EEEEECCCCHHHHHH
Q ss_conf 355304774067999
Q gi|254780799|r 457 LLIAGTTGSGKSVAI 471 (806)
Q Consensus 457 LLIAGtTGSGKSV~i 471 (806)
++.=|.|||||+=-+
T Consensus 88 i~aYGqTGSGKTyTm 102 (330)
T d1ry6a_ 88 CFAYGQTGSGKTYTM 102 (330)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCCEEE
T ss_conf 985543666661555
No 183
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.47 E-value=3.1 Score=18.00 Aligned_cols=25 Identities=36% Similarity=0.590 Sum_probs=19.0
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 2355304774067999999999998299
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYRMT 483 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk~~ 483 (806)
|+++..-|||||+.|- ++.+|.+..
T Consensus 42 dvl~~a~TGsGKTlay---llP~l~~~~ 66 (206)
T d1veca_ 42 DILARAKNGTGKSGAY---LIPLLERLD 66 (206)
T ss_dssp CEEEECCSSSTTHHHH---HHHHHHHCC
T ss_pred CEEEECCCCCCCCCCC---CCCHHHCCC
T ss_conf 8874436740011212---464132021
No 184
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=53.32 E-value=4.2 Score=16.98 Aligned_cols=48 Identities=21% Similarity=0.319 Sum_probs=30.1
Q ss_pred EEEEEECCCCHHHHHHHHHHHHH---HHHCCH---HHEEEEEECCCHHHHHHCC
Q ss_conf 23553047740679999999999---982995---7847888523100111027
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSL---LYRMTP---AQCRLIMIDPKMLELSVYD 503 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~Sl---Lyk~~P---~evkliliDPK~vEls~Y~ 503 (806)
-+++-|..|+|||--||.++..- -|..++ ...+.+..+.+.++|.+++
T Consensus 7 Ki~vvG~~~vGKTsLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~wD 60 (169)
T d3raba_ 7 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWD 60 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSCCCSSCCCCCSEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEE
T ss_conf 999999999198999999973988865145555310468998624369999998
No 185
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.87 E-value=4.5 Score=16.75 Aligned_cols=44 Identities=25% Similarity=0.571 Sum_probs=27.6
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCHH---------HEEEEEECCCHHHHHHCC
Q ss_conf 35530477406799999999999829957---------847888523100111027
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLLYRMTPA---------QCRLIMIDPKMLELSVYD 503 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlLyk~~P~---------evkliliDPK~vEls~Y~ 503 (806)
+++.|..|+|||--+|.++.. ++.+. ..+-+..|.+..++.+++
T Consensus 8 I~lvG~~~vGKTsll~~~~~~---~~~~~~~~t~~~~~~~~~~~~~~~~~~~~i~D 60 (174)
T d2bmea1 8 FLVIGNAGTGKSCLLHQFIEK---KFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 60 (174)
T ss_dssp EEEEESTTSSHHHHHHHHHHS---SCCTTCCCCSEEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHC---CCCCCCCCCCCCCEEEEEEEECCCCEEEEEEE
T ss_conf 999999990999999999709---88865553310102567997167101588997
No 186
>d1cora_ a.3.1.1 (A:) Cytochrome c551 {Pseudomonas stutzeri [TaxId: 316]}
Probab=52.87 E-value=3.8 Score=17.32 Aligned_cols=16 Identities=19% Similarity=0.291 Sum_probs=14.5
Q ss_pred CCHHHHHHHHHHHHHC
Q ss_conf 8988999999999712
Q gi|254780799|r 697 VSDIEVEKVVSHLKTQ 712 (806)
Q Consensus 697 v~~~ev~~v~~~~~~q 712 (806)
+||+|+..|++|+++|
T Consensus 66 lsdeei~~la~Yi~Sl 81 (82)
T d1cora_ 66 VTEEEAKILAEWILSQ 81 (82)
T ss_dssp CCHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHC
T ss_conf 9999999999999856
No 187
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.77 E-value=4.9 Score=16.49 Aligned_cols=44 Identities=23% Similarity=0.338 Sum_probs=27.8
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCCHHH---------EEEEEECCCHHHHHHCC
Q ss_conf 2355304774067999999999998299578---------47888523100111027
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYRMTPAQ---------CRLIMIDPKMLELSVYD 503 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk~~P~e---------vkliliDPK~vEls~Y~ 503 (806)
+++|-|..|+|||--||.++. ..-+++ .+.+.+|-+.++|..++
T Consensus 8 Kv~lvG~~~vGKTsLi~r~~~----~~f~~~~~~t~~~~~~~~~~~~~~~~~l~~~d 60 (173)
T d2fn4a1 8 KLVVVGGGGVGKSALTIQFIQ----SYFVSDYDPTIEDSYTKICSVDGIPARLDILD 60 (173)
T ss_dssp EEEEEECTTSSHHHHHHHHHH----SSCCSSCCTTCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHH----CCCCCCCCCCCCCCEEEEECCCCEEEEEECCC
T ss_conf 999999799698999999973----99971003441110025750398330010121
No 188
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=52.45 E-value=2.7 Score=18.43 Aligned_cols=53 Identities=17% Similarity=0.224 Sum_probs=25.8
Q ss_pred HHCCCCCHHHHCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCC-CCCCCCCC
Q ss_conf 23388645786588754773689832588833489889999999997128-97421100
Q gi|254780799|r 664 TILGEQGAEQLLGQGDMLYMTGGGRVQRIHGPFVSDIEVEKVVSHLKTQG-EAKYIDIK 721 (806)
Q Consensus 664 tild~~gae~Llg~gdml~~~~~~~~~r~~g~~v~~~ev~~v~~~~~~q~-~~~y~~~~ 721 (806)
++.|-.|.|+.--.+. .+....-....--|-.-..+|+.-+..+. ..-|.+..
T Consensus 245 ~~vDLAGsEr~~~~~~-----~~~~~~e~~~in~Sl~~L~~vi~al~~~~~~iPyR~Sk 298 (345)
T d1x88a1 245 NLVDLAGSENIGRSGA-----VDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESK 298 (345)
T ss_dssp EEEECCCCCC--------------------CCCHHHHHHHHHHHHHHTTCSCCCGGGSH
T ss_pred EEEECCCCCCCCCCCC-----HHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 9984177641012541-----23210012455401889999999986479967873688
No 189
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.41 E-value=4.7 Score=16.63 Aligned_cols=21 Identities=24% Similarity=0.490 Sum_probs=18.6
Q ss_pred EEEEEECCCCHHHHHHHHHHH
Q ss_conf 235530477406799999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~ 476 (806)
+++|-|..|+|||--||.++.
T Consensus 6 Ki~vvG~~~vGKTsLi~~~~~ 26 (175)
T d2f9la1 6 KVVLIGDSGVGKSNLLSRFTR 26 (175)
T ss_dssp EEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
T ss_conf 999999999098999999982
No 190
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=52.34 E-value=4.5 Score=16.79 Aligned_cols=20 Identities=25% Similarity=0.481 Sum_probs=17.6
Q ss_pred EEEEECCCCHHHHHHHHHHH
Q ss_conf 35530477406799999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~ 476 (806)
.+|.|..|+|||--+|.+.-
T Consensus 3 V~ivG~~~~GKTsLl~~l~~ 22 (207)
T d2fh5b1 3 VLFVGLCDSGKTLLFVRLLT 22 (207)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHC
T ss_conf 99999999898999999980
No 191
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.20 E-value=4.7 Score=16.65 Aligned_cols=47 Identities=17% Similarity=0.325 Sum_probs=29.1
Q ss_pred CCEEEEEHHHHHHHHHHCCC----------HHHHHHHHHHHHHHHCCEEEEEEECCC
Q ss_conf 98687763446888873210----------058899999986641423799996577
Q gi|254780799|r 589 MPYIVVVIDEMADLMMVARK----------DIESAVQRLAQMARASGIHVIMATQRP 635 (806)
Q Consensus 589 lp~ivviiDElaDlmm~~~~----------~ve~~i~rlaq~ara~GiHli~aTqrP 635 (806)
..+-.+++|-+..++..... ..-..+.+|.+.++..+.-.++-.|.-
T Consensus 133 ~~~~~~vid~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~~~~~~ 189 (258)
T d1v5wa_ 133 GIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 189 (258)
T ss_dssp SSEEEEEEETSGGGHHHHCCGGGCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-
T ss_pred CCCEEEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf 574189853023332024567762057899999999999998986297799951475
No 192
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=51.99 E-value=2.7 Score=18.49 Aligned_cols=47 Identities=17% Similarity=0.173 Sum_probs=24.3
Q ss_pred HHCCCCCHHHHCCCCCEEEECCCCCEEEEEECCC--CHHHHHHHHHHHHHCC-CCCCCCCC
Q ss_conf 2338864578658875477368983258883348--9889999999997128-97421100
Q gi|254780799|r 664 TILGEQGAEQLLGQGDMLYMTGGGRVQRIHGPFV--SDIEVEKVVSHLKTQG-EAKYIDIK 721 (806)
Q Consensus 664 tild~~gae~Llg~gdml~~~~~~~~~r~~g~~v--~~~ev~~v~~~~~~q~-~~~y~~~~ 721 (806)
++.|-.|.|..- +|+ ..-.+.+| |=.-..+|+..+..+. ...|.+..
T Consensus 275 ~~VDLAGse~~~-~~~----------~~~E~~~IN~SL~aL~~vi~aL~~~~~~iPyR~Sk 324 (368)
T d2ncda_ 275 NLVDLAGSESPK-TST----------RMTETKNINRSLSELTNVILALLQKQDHIPYRNSK 324 (368)
T ss_dssp EEEECCCCCCC---------------------CTTHHHHHHHHHHHHHHTTCSCCCGGGSH
T ss_pred EEEEECCCCCCC-HHH----------HHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 442201023310-232----------10245520264999999999986589989975788
No 193
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.87 E-value=2.7 Score=18.46 Aligned_cols=52 Identities=19% Similarity=0.141 Sum_probs=26.5
Q ss_pred HHCCCCCHHHHCCCCCEEEECCCCCEEEEEECCC--CHHHHHHHHHHHHHCC-CCCCCCCCC
Q ss_conf 2338864578658875477368983258883348--9889999999997128-974211001
Q gi|254780799|r 664 TILGEQGAEQLLGQGDMLYMTGGGRVQRIHGPFV--SDIEVEKVVSHLKTQG-EAKYIDIKD 722 (806)
Q Consensus 664 tild~~gae~Llg~gdml~~~~~~~~~r~~g~~v--~~~ev~~v~~~~~~q~-~~~y~~~~~ 722 (806)
++.|-.|.|+.-..|.. .-.+-.+.++ |=.-..+|+..+.++. ...|.+...
T Consensus 226 ~~vDLAGse~~~~~~~~-------~~~~~e~~~iN~SL~~L~~vi~al~~~~~~iPyR~SkL 280 (323)
T d1bg2a_ 226 YLVDLAGSEKVSKTGAE-------GAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKM 280 (323)
T ss_dssp EEEECCCSCCCCCCSSS-------CTTSCCCCCCCHHHHHHHHHHHHHHTTCSCCCGGGSHH
T ss_pred EEEECCCCCCCCCCCCH-------HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHH
T ss_conf 99852555422446631-------55554420033257999999999865998368746799
No 194
>d1c52a_ a.3.1.1 (A:) Cytochrome c552 {Thermus thermophilus [TaxId: 274]}
Probab=51.84 E-value=5.6 Score=16.05 Aligned_cols=17 Identities=29% Similarity=0.479 Sum_probs=15.3
Q ss_pred CCCHHHHHHHHHHHHHC
Q ss_conf 48988999999999712
Q gi|254780799|r 696 FVSDIEVEKVVSHLKTQ 712 (806)
Q Consensus 696 ~v~~~ev~~v~~~~~~q 712 (806)
-+||+||..|++|+|.+
T Consensus 74 ~LsD~eI~av~~YIr~~ 90 (131)
T d1c52a_ 74 QLKDEEIAAVLNHIATA 90 (131)
T ss_dssp TSCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHH
T ss_conf 79999999999999987
No 195
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=51.63 E-value=2.7 Score=18.42 Aligned_cols=52 Identities=17% Similarity=0.236 Sum_probs=27.3
Q ss_pred HHCCCCCHHHHCCCCCEEEECCCCCEEEE-EECCC--CHHHHHHHHHHHHHCC-CCCCCCCCCC
Q ss_conf 23388645786588754773689832588-83348--9889999999997128-9742110012
Q gi|254780799|r 664 TILGEQGAEQLLGQGDMLYMTGGGRVQRI-HGPFV--SDIEVEKVVSHLKTQG-EAKYIDIKDK 723 (806)
Q Consensus 664 tild~~gae~Llg~gdml~~~~~~~~~r~-~g~~v--~~~ev~~v~~~~~~q~-~~~y~~~~~~ 723 (806)
++.|-.|.|+.--.| +.-.|. .+.++ |-.-..+|+..+.+.. ...|.+....
T Consensus 225 ~~vDLAGsEr~~~~~--------~~g~~~~E~~~iN~SL~~L~~vi~aL~~~~~~ipyR~SkLT 280 (364)
T d1sdma_ 225 SFVDLAGSERVKKSG--------SAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLT 280 (364)
T ss_dssp EEEECCCCSCCCC-----------------CCCTTCHHHHHHHHHHHHHHHTCSCCCGGGCHHH
T ss_pred EEECHHHCCCCCCCC--------CCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 840410035200146--------66750233233564320689999999749975773011213
No 196
>d1tuba1 c.32.1.1 (A:1-245) Tubulin alpha-subunit {Pig (Sus scrofa) [TaxId: 9823]}
Probab=51.19 E-value=5.2 Score=16.28 Aligned_cols=83 Identities=19% Similarity=0.335 Sum_probs=52.6
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHCCCCHHH-HCCCCCCHHHHHHHHHHHHHH-------
Q ss_conf 553047740679999999999982995784788852310011102770343-122334304566899999999-------
Q gi|254780799|r 458 LIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKMLELSVYDGIPNL-LTPVVTNPQKAVTVLKWLVCE------- 529 (806)
Q Consensus 458 LIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~vEls~Y~~iPHL-l~pVvTd~~kA~~aL~w~V~E------- 529 (806)
=+||-|||| +-+.|+..|--.-|+..++- .++| |+- ..-||+.|=.++-+|.|...-
T Consensus 140 Sl~GGTGSG----lGs~l~e~l~d~yp~~~~~~--------~~V~---P~~~~~~~vvqpYNtvLsl~~L~~~sD~v~~~ 204 (245)
T d1tuba1 140 SFGGGTGSG----FTSLLMERLSVDYGKKSKLE--------FSIY---PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204 (245)
T ss_dssp CSSCGGGTH----HHHHHTHHHHHHTTTSCEEE--------EECC---CCSSCSTTTTHHHHHHHHHHHHHHCCCCEEEC
T ss_pred ECCCCCCCC----HHHHHHHHHHHHCCCCCCCC--------EEEE---CCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEE
T ss_conf 237757675----02779999877614454442--------4880---56667873253506565168898618804894
Q ss_pred -HHHHHHHHHH-CCCC--CHHHHHHHHHHH
Q ss_conf -9999999987-0899--689999999988
Q gi|254780799|r 530 -MEERYQKMSK-IGVR--NIDGFNLKVAQY 555 (806)
Q Consensus 530 -Me~RY~l~a~-~~vR--ni~~yN~k~~~~ 555 (806)
=|.=|+...+ +++. +.+..|+-+.+.
T Consensus 205 dN~al~~i~~~~l~i~~~s~~~lN~via~~ 234 (245)
T d1tuba1 205 DNEAIYDICRRNLDIERPTYTNLNRLIGQI 234 (245)
T ss_dssp CHHHHHHHHHHTSCCSSCCHHHHHHHHHHH
T ss_pred EHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 139999999985589999989999999999
No 197
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=51.09 E-value=5.7 Score=15.97 Aligned_cols=26 Identities=12% Similarity=0.160 Sum_probs=14.3
Q ss_pred CCHHHHHHHHHHHHHHHCCEEEEEEE
Q ss_conf 10058899999986641423799996
Q gi|254780799|r 607 RKDIESAVQRLAQMARASGIHVIMAT 632 (806)
Q Consensus 607 ~~~ve~~i~rlaq~ara~GiHli~aT 632 (806)
+...-.++.-|-.+-+.+..|-|-+=
T Consensus 601 ~~~fr~sL~~L~~~L~~t~~hFIRCI 626 (794)
T d2mysa2 601 SALFRENLNKLMANLRSTHPHFVRCI 626 (794)
T ss_dssp HHHHHHHHHHHHHHHHTSEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 99999999999998756898688864
No 198
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.08 E-value=5.2 Score=16.31 Aligned_cols=43 Identities=19% Similarity=0.270 Sum_probs=26.2
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCCHHH---------EEEEEECCCHHHHHHC
Q ss_conf 2355304774067999999999998299578---------4788852310011102
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYRMTPAQ---------CRLIMIDPKMLELSVY 502 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk~~P~e---------vkliliDPK~vEls~Y 502 (806)
.+++-|..|+|||-.+|.++. ..-+++ .+.+.+|-+.++|.++
T Consensus 4 Ki~viG~~~vGKTsLi~r~~~----~~f~~~~~~T~~~~~~~~~~~~~~~~~l~~~ 55 (171)
T d2erxa1 4 RVAVFGAGGVGKSSLVLRFVK----GTFRESYIPTVEDTYRQVISCDKSICTLQIT 55 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHT----CCCCSSCCCCSCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHH----CCCCCCCCCCEEECCCCCEEECCCCCEECCC
T ss_conf 899999899798999999970----9998763761331011210002200000111
No 199
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.94 E-value=5.6 Score=16.06 Aligned_cols=23 Identities=35% Similarity=0.554 Sum_probs=19.2
Q ss_pred CCE--EEEEECCCCHHHHHHHHHHH
Q ss_conf 202--35530477406799999999
Q gi|254780799|r 454 MPH--LLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 454 MPH--LLIAGtTGSGKSV~iN~iI~ 476 (806)
||- +++-|--|+|||-.||.++.
T Consensus 1 m~e~Ki~viG~~~vGKTsli~~l~~ 25 (166)
T d1ctqa_ 1 MTEYKLVVVGAGGVGKSALTIQLIQ 25 (166)
T ss_dssp CEEEEEEEEESTTSSHHHHHHHHHH
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHH
T ss_conf 9766999999799899999999980
No 200
>d1u5ta2 a.4.5.54 (A:165-232) Vacuolar sorting protein SNF8 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=50.78 E-value=3.9 Score=17.20 Aligned_cols=44 Identities=23% Similarity=0.280 Sum_probs=36.0
Q ss_pred HHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHH
Q ss_conf 99999996598500014222001177899999999977986802
Q gi|254780799|r 745 QAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGPA 788 (806)
Q Consensus 745 ~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~ 788 (806)
.+.++.-..|.+|.|+||++|+=-=.||-+.+|.|=.+|++==-
T Consensus 7 ~vLe~a~~~G~Vt~s~l~~~lgW~~~Ra~~aLd~lv~eGl~WvD 50 (68)
T d1u5ta2 7 KILEICSILGYSSISLLKANLGWEAVRSKSALDEMVANGLLWID 50 (68)
T ss_dssp HHHHTTTTTSCCBHHHHHHHHCCCSHHHHHHHHHHHHTTSSEEE
T ss_pred HHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 99999997495539999988499899999999999966957876
No 201
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=50.63 E-value=4.9 Score=16.48 Aligned_cols=46 Identities=20% Similarity=0.287 Sum_probs=24.2
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHCCCCH
Q ss_conf 0235530477406799999999999829957847888523100111027703
Q gi|254780799|r 455 PHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKMLELSVYDGIP 506 (806)
Q Consensus 455 PHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~vEls~Y~~iP 506 (806)
-|.++.|..|||||-- +..|.+.-+ -.+++..|--.-+...+....
T Consensus 6 ~~I~i~G~~GsGKTT~-----~~~La~~l~-~~~~~~~~~~~~~~~~~~~~~ 51 (174)
T d1y63a_ 6 INILITGTPGTGKTSM-----AEMIAAELD-GFQHLEVGKLVKENHFYTEYD 51 (174)
T ss_dssp CEEEEECSTTSSHHHH-----HHHHHHHST-TEEEEEHHHHHHHTTCSCC--
T ss_pred CEEEEEECCCCCHHHH-----HHHHHHHHC-CCCEEEHHHHHHHHHHHHHHH
T ss_conf 8899982899988999-----999999858-990874799888876435677
No 202
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=50.50 E-value=2.9 Score=18.18 Aligned_cols=23 Identities=26% Similarity=0.505 Sum_probs=17.8
Q ss_pred ECCCCCEEEEEECCCCHHHHHHH
Q ss_conf 41002023553047740679999
Q gi|254780799|r 450 DLARMPHLLIAGTTGSGKSVAIN 472 (806)
Q Consensus 450 DLakMPHLLIAGtTGSGKSV~iN 472 (806)
++.|.+=+++-|..|||||.--.
T Consensus 4 ~~~~~~iI~l~G~pGSGKsT~a~ 26 (194)
T d3adka_ 4 KLKKSKIIFVVGGPGSGKGTQCE 26 (194)
T ss_dssp HHHTSCEEEEEECTTSSHHHHHH
T ss_pred CCCCCCEEEEECCCCCCHHHHHH
T ss_conf 24678289998999998799999
No 203
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.39 E-value=5.2 Score=16.28 Aligned_cols=20 Identities=25% Similarity=0.484 Sum_probs=17.3
Q ss_pred EEEEECCCCHHHHHHHHHHH
Q ss_conf 35530477406799999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~ 476 (806)
++|-|..|+|||--+|.++.
T Consensus 3 v~vvG~~~vGKTsLi~r~~~ 22 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMY 22 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999899098999999984
No 204
>d1sd4a_ a.4.5.39 (A:) Penicillinase repressor BlaI {Staphylococcus aureus [TaxId: 1280]}
Probab=50.34 E-value=5.9 Score=15.89 Aligned_cols=44 Identities=14% Similarity=0.228 Sum_probs=25.0
Q ss_pred HHHHHHHHCCCEEEEHHHHHH----CCCHHHHHHHHHHHHHCCCCCHH
Q ss_conf 999999965985000142220----01177899999999977986802
Q gi|254780799|r 745 QAVDIVLRDNKASISYIQRRL----GIGYNRAASIIENMEEKGVIGPA 788 (806)
Q Consensus 745 ~a~~~v~~~~~~s~s~lqr~~----~igy~raar~~~~~e~~giv~~~ 788 (806)
+..+++.+.+.++++=++.++ ...|+--..++..|+++|+|...
T Consensus 10 ~VM~~lW~~~~~t~~ei~~~l~~~~~~~~tTv~T~L~rL~~Kg~l~~~ 57 (122)
T d1sd4a_ 10 DVMNIIWDKKSVSANEIVVEIQKYKEVSDKTIRTLITRLYKKEIIKRY 57 (122)
T ss_dssp HHHHHHHHSSSEEHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEE
T ss_conf 999999847997799999984145899585899999999861020353
No 205
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=50.25 E-value=5.9 Score=15.90 Aligned_cols=22 Identities=27% Similarity=0.386 Sum_probs=18.7
Q ss_pred EEEEEECCCCHHHHHHHHHHHH
Q ss_conf 2355304774067999999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILS 477 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~S 477 (806)
.+++.|..|+|||.-+|.+...
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~~ 25 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIASG 25 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999998989999999719
No 206
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=50.01 E-value=5.1 Score=16.33 Aligned_cols=24 Identities=21% Similarity=0.445 Sum_probs=20.3
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHH
Q ss_conf 020235530477406799999999
Q gi|254780799|r 453 RMPHLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 453 kMPHLLIAGtTGSGKSV~iN~iI~ 476 (806)
+.|=-+|.|--||||+-.+|-++-
T Consensus 2 ~iPv~iitGFLGaGKTTll~~lL~ 25 (222)
T d1nija1 2 PIAVTLLTGFLGAGKTTLLRHILN 25 (222)
T ss_dssp CEEEEEEEESSSSSCHHHHHHHHH
T ss_pred CCCEEEEEECCCCCHHHHHHHHHH
T ss_conf 978899864888999999999985
No 207
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=49.92 E-value=5.2 Score=16.28 Aligned_cols=25 Identities=16% Similarity=0.312 Sum_probs=20.1
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHH
Q ss_conf 0020235530477406799999999
Q gi|254780799|r 452 ARMPHLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 452 akMPHLLIAGtTGSGKSV~iN~iI~ 476 (806)
.|..-+++-|.+|+|||--+|.+..
T Consensus 11 ~k~~kI~lvG~~~vGKTsLl~~l~~ 35 (186)
T d1f6ba_ 11 KKTGKLVFLGLDNAGKTTLLHMLKD 35 (186)
T ss_dssp TCCEEEEEEEETTSSHHHHHHHHSC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHC
T ss_conf 7777899999999898999999967
No 208
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=49.85 E-value=6 Score=15.84 Aligned_cols=31 Identities=26% Similarity=0.448 Sum_probs=22.1
Q ss_pred EEEECCCCCEEEEEECCCCHHHHHHHHHHHHH
Q ss_conf 78541002023553047740679999999999
Q gi|254780799|r 447 IIADLARMPHLLIAGTTGSGKSVAINTMILSL 478 (806)
Q Consensus 447 vv~DLakMPHLLIAGtTGSGKSV~iN~iI~Sl 478 (806)
+-.++.+==.+-+.|..|||||.-+|.| +-|
T Consensus 19 isl~i~~Gei~~liGpsGsGKSTLl~~i-~Gl 49 (232)
T d2awna2 19 INLDIHEGEFVVFVGPSGCGKSTLLRMI-AGL 49 (232)
T ss_dssp EEEEECTTCEEEEECCTTSSHHHHHHHH-HTS
T ss_pred EEEEECCCCEEEEECCCCCHHHHHHHHH-HCC
T ss_conf 1778869989999989998299999999-658
No 209
>d2cfxa1 a.4.5.32 (A:1-63) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=49.80 E-value=6 Score=15.83 Aligned_cols=49 Identities=14% Similarity=0.307 Sum_probs=42.7
Q ss_pred CCHHHHHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCH
Q ss_conf 7703899999999659850001422200117789999999997798680
Q gi|254780799|r 739 ADDLYKQAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGP 787 (806)
Q Consensus 739 ~d~l~~~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~ 787 (806)
.|++=.+-++...+..+.|.+-|-+++.+.-.-..+=+..||+.|++-.
T Consensus 3 lD~~D~~IL~~L~~n~r~s~~~iA~~lgis~~tv~~Ri~~L~~~giI~~ 51 (63)
T d2cfxa1 3 LDQIDLNIIEELKKDSRLSMRELGRKIKLSPPSVTERVRQLESFGIIKQ 51 (63)
T ss_dssp CCHHHHHHHHHHHHCSCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE
T ss_pred CCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEE
T ss_conf 7899999999999839999999999989687899999999998898565
No 210
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.78 E-value=5.4 Score=16.16 Aligned_cols=43 Identities=28% Similarity=0.385 Sum_probs=25.7
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCHHH---------EEEEEECCCHHHHHHCC
Q ss_conf 355304774067999999999998299578---------47888523100111027
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLLYRMTPAQ---------CRLIMIDPKMLELSVYD 503 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlLyk~~P~e---------vkliliDPK~vEls~Y~ 503 (806)
++|-|..|+|||-.+|.++. ..-|++ .+-+.++-+.+.|.+++
T Consensus 5 ivvvG~~~vGKTsLi~~~~~----~~f~~~~~~t~~~~~~~~~~~~~~~~~l~i~D 56 (177)
T d1kmqa_ 5 LVIVGDGACGKTCLLIVNSK----DQFPEVYVPTVFENYVADIEVDGKQVELALWD 56 (177)
T ss_dssp EEEEESTTSSHHHHHHHHHH----SCCCSSCCCCSEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHH----CCCCCCCCCCEEEECCCCCCCCCCCEEEECCC
T ss_conf 99999899388999999971----99988728822441122100354202450245
No 211
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=49.68 E-value=5.6 Score=16.04 Aligned_cols=22 Identities=23% Similarity=0.484 Sum_probs=18.4
Q ss_pred CEEEEEECCCCHHHHHHHHHHH
Q ss_conf 0235530477406799999999
Q gi|254780799|r 455 PHLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 455 PHLLIAGtTGSGKSV~iN~iI~ 476 (806)
-++++-|-.|+|||--+|.++.
T Consensus 3 ~Ki~~vG~~~vGKSsLi~~~~~ 24 (175)
T d1ky3a_ 3 LKVIILGDSGVGKTSLMHRYVN 24 (175)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHC
T ss_conf 8999999999698999999970
No 212
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=49.67 E-value=3 Score=18.05 Aligned_cols=16 Identities=38% Similarity=0.652 Sum_probs=12.4
Q ss_pred EEEEEECCCCHHHHHH
Q ss_conf 2355304774067999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAI 471 (806)
Q Consensus 456 HLLIAGtTGSGKSV~i 471 (806)
=++.-|.|||||+--+
T Consensus 89 ti~aYGqTgSGKT~Tm 104 (349)
T d2zfia1 89 CIFAYGQTGAGKSYTM 104 (349)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCCCEEE
T ss_conf 0563025788774162
No 213
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.64 E-value=5.1 Score=16.34 Aligned_cols=20 Identities=30% Similarity=0.496 Sum_probs=16.9
Q ss_pred EEEEEECCCCHHHHHHHHHH
Q ss_conf 23553047740679999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI 475 (806)
.++|.|..|+|||--+|.++
T Consensus 7 Ki~ivG~~~vGKTsLi~~l~ 26 (186)
T d2f7sa1 7 KLLALGDSGVGKTTFLYRYT 26 (186)
T ss_dssp EEEEESCTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
T ss_conf 99999999919899999996
No 214
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=49.44 E-value=5.3 Score=16.23 Aligned_cols=36 Identities=17% Similarity=0.325 Sum_probs=28.2
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHH
Q ss_conf 2355304774067999999999998299578478885231001
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKMLE 498 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~vE 498 (806)
.+|..|-.|+|||..++++.-.+ .+.++-+++..+.
T Consensus 40 giLL~GppGtGKT~l~~ala~~~-------~~~~~~i~~~~l~ 75 (258)
T d1e32a2 40 GILLYGPPGTGKTLIARAVANET-------GAFFFLINGPEIM 75 (258)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHT-------TCEEEEECHHHHT
T ss_pred EEEEECCCCCCCHHHHHHHHHHH-------CCEEEEEECHHHC
T ss_conf 46876699888308999999874-------8837999730430
No 215
>d1tvca2 c.25.1.2 (A:111-251) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]}
Probab=49.42 E-value=6.1 Score=15.79 Aligned_cols=40 Identities=20% Similarity=0.338 Sum_probs=26.6
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECC
Q ss_conf 0020235530477406799999999999829957847888523
Q gi|254780799|r 452 ARMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDP 494 (806)
Q Consensus 452 akMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDP 494 (806)
.+-|++||||=||=. =+-+|+-.++-+..+.+|.|+----
T Consensus 7 ~~~p~vliagGtGIt---P~~s~l~~~~~~~~~~~v~l~~~~r 46 (141)
T d1tvca2 7 GMAPRYFVAGGTGLA---PVVSMVRQMQEWTAPNETRIYFGVN 46 (141)
T ss_dssp SSSCEEEEEESSTTH---HHHHHHHHHHHHTCCSCEEEEEECS
T ss_pred CCCCEEEEECCHHHH---HHHHHHHHHHHCCCCCCEEEEEECC
T ss_conf 998489997744099---9999999999839998357775112
No 216
>d3erja1 c.131.1.1 (A:2-117) Hypothetical protein AF2095 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=49.19 E-value=5.9 Score=15.90 Aligned_cols=12 Identities=17% Similarity=0.302 Sum_probs=6.4
Q ss_pred HHHHHHHHHCCE
Q ss_conf 999986641423
Q gi|254780799|r 615 QRLAQMARASGI 626 (806)
Q Consensus 615 ~rlaq~ara~Gi 626 (806)
..|+++|++.|+
T Consensus 61 ~~l~~~a~~~~l 72 (116)
T d3erja1 61 LGIKHKAESLGL 72 (116)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHCCC
T ss_conf 999999998799
No 217
>d1r7ja_ a.4.5.49 (A:) Sso10a (SSO10449) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=49.12 E-value=6.1 Score=15.76 Aligned_cols=43 Identities=9% Similarity=0.178 Sum_probs=34.4
Q ss_pred HHHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCH
Q ss_conf 899999999659850001422200117789999999997798680
Q gi|254780799|r 743 YKQAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGP 787 (806)
Q Consensus 743 ~~~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~ 787 (806)
+-+-.+.+ + ..++.+-|.++-.+-|.|+.+.++.|++.|.|..
T Consensus 8 i~DIL~~~-~-~g~~kT~i~~~aNLs~~~~~kyl~~L~~~GLI~~ 50 (90)
T d1r7ja_ 8 IQAILEAC-K-SGSPKTRIMYGANLSYALTGRYIKMLMDLEIIRQ 50 (90)
T ss_dssp HHHHHHHH-T-TCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHH-H-CCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEE
T ss_conf 99999997-6-7998207789719999999999999998889663
No 218
>d1c6sa_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Cyanobacterium (Synechococcus elongatus) [TaxId: 32046]}
Probab=49.09 E-value=3.9 Score=17.20 Aligned_cols=21 Identities=14% Similarity=0.199 Sum_probs=17.6
Q ss_pred CCCCHHHHHHHHHHHHHCCCC
Q ss_conf 348988999999999712897
Q gi|254780799|r 695 PFVSDIEVEKVVSHLKTQGEA 715 (806)
Q Consensus 695 ~~v~~~ev~~v~~~~~~q~~~ 715 (806)
..+||+||..|+.|+.+|.+.
T Consensus 63 ~~Ls~~ei~~v~aYi~~~a~~ 83 (87)
T d1c6sa_ 63 GRLTDEQIQDVAAYVLDQAAK 83 (87)
T ss_dssp TTSCSHHHHHHHHHHHHHTTS
T ss_pred CCCCHHHHHHHHHHHHHHHHC
T ss_conf 799999999999999997764
No 219
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=49.01 E-value=5 Score=16.39 Aligned_cols=21 Identities=43% Similarity=0.768 Sum_probs=15.4
Q ss_pred CCEEE---EEECCCCHHHHHHHHH
Q ss_conf 20235---5304774067999999
Q gi|254780799|r 454 MPHLL---IAGTTGSGKSVAINTM 474 (806)
Q Consensus 454 MPHLL---IAGtTGSGKSV~iN~i 474 (806)
||-+| |-|.-|||||-.++.+
T Consensus 1 mp~~lrI~IEG~iGsGKTTl~~~L 24 (329)
T d1e2ka_ 1 MPTLLRVYIDGPHGMGKTTTTQLL 24 (329)
T ss_dssp CCEEEEEEECSCTTSSHHHHHHHH
T ss_pred CCCCEEEEEECCCCCCHHHHHHHH
T ss_conf 997429999898677899999999
No 220
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.01 E-value=5.9 Score=15.88 Aligned_cols=24 Identities=25% Similarity=0.516 Sum_probs=19.9
Q ss_pred CCC--EEEEEECCCCHHHHHHHHHHH
Q ss_conf 020--235530477406799999999
Q gi|254780799|r 453 RMP--HLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 453 kMP--HLLIAGtTGSGKSV~iN~iI~ 476 (806)
|+| .++|-|..|+|||-.||.++.
T Consensus 3 ~~~~~KI~vvG~~~vGKSSli~~~~~ 28 (174)
T d1wmsa_ 3 KSSLFKVILLGDGGVGKSSLMNRYVT 28 (174)
T ss_dssp CEEEEEEEEECCTTSSHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHHH
T ss_conf 87347999999999799999999984
No 221
>d1lj9a_ a.4.5.28 (A:) Transcriptional regulator SlyA {Enterococcus faecalis [TaxId: 1351]}
Probab=48.90 E-value=6.2 Score=15.73 Aligned_cols=57 Identities=19% Similarity=0.146 Sum_probs=41.5
Q ss_pred HHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHC-CCCCEEEECHH
Q ss_conf 9999999659850001422200117789999999997798680227-88726731712
Q gi|254780799|r 745 QAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGPASS-TGKREILISSM 801 (806)
Q Consensus 745 ~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~~g-~~~r~vl~~~~ 801 (806)
..+..+.+.+-.+.+-|-+++.+--+-..|+++.||++|+|--... .-.|.+++.-.
T Consensus 33 ~iL~~i~~~~~~t~~~la~~l~i~~~tvs~~l~~L~~~glI~r~~~~~D~R~~~l~LT 90 (144)
T d1lj9a_ 33 LYLVRVCENPGIIQEKIAELIKVDRTTAARAIKRLEEQGFIYRQEDASNKKIKRIYAT 90 (144)
T ss_dssp HHHHHHHHSTTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEEC
T ss_pred HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 9999998289989999999878247169999999996032010578899985312568
No 222
>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.82 E-value=6.2 Score=15.72 Aligned_cols=24 Identities=29% Similarity=0.419 Sum_probs=19.8
Q ss_pred CEEEE-E-ECCCCHHHHHHHHHHHHH
Q ss_conf 32588-8-334898899999999971
Q gi|254780799|r 688 RVQRI-H-GPFVSDIEVEKVVSHLKT 711 (806)
Q Consensus 688 ~~~r~-~-g~~v~~~ev~~v~~~~~~ 711 (806)
+..|| | |.|.+.+||+++++.+++
T Consensus 354 ~~iRis~~g~~~t~edid~li~aL~~ 379 (388)
T d1h0ca_ 354 KVLRIGLLGCNATRENVDRVTEALRA 379 (388)
T ss_dssp TEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 98998477777999999999999999
No 223
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=48.82 E-value=5.9 Score=15.89 Aligned_cols=21 Identities=24% Similarity=0.534 Sum_probs=18.2
Q ss_pred EEEEEECCCCHHHHHHHHHHH
Q ss_conf 235530477406799999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~ 476 (806)
++++.|-.|+|||--+|.+..
T Consensus 2 kivlvG~~~vGKSsLi~~l~~ 22 (160)
T d1r8sa_ 2 RILMVGLDAAGKTTILYKLKL 22 (160)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 899999999898999999965
No 224
>d1c75a_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Bacillus pasteurii [TaxId: 1474]}
Probab=48.69 E-value=5.1 Score=16.38 Aligned_cols=17 Identities=24% Similarity=0.319 Sum_probs=15.2
Q ss_pred CCCHHHHHHHHHHHHHC
Q ss_conf 48988999999999712
Q gi|254780799|r 696 FVSDIEVEKVVSHLKTQ 712 (806)
Q Consensus 696 ~v~~~ev~~v~~~~~~q 712 (806)
-+||+|++.|++|+.+|
T Consensus 54 ~Ls~~ei~~i~~Yl~~~ 70 (71)
T d1c75a_ 54 IAKGAEAEAVAAWLAEK 70 (71)
T ss_dssp SSCHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHC
T ss_conf 89999999999999973
No 225
>d1ctja_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Monoraphidium braunii [TaxId: 34112]}
Probab=48.56 E-value=3.3 Score=17.81 Aligned_cols=20 Identities=15% Similarity=0.124 Sum_probs=16.8
Q ss_pred CCCCHHHHHHHHHHHHHCCC
Q ss_conf 34898899999999971289
Q gi|254780799|r 695 PFVSDIEVEKVVSHLKTQGE 714 (806)
Q Consensus 695 ~~v~~~ev~~v~~~~~~q~~ 714 (806)
.-+||+||+.|+.|+.+|+.
T Consensus 66 ~~Lsd~ei~~v~~Yi~~~~~ 85 (89)
T d1ctja_ 66 GRLDEDEIAGVAAYVYDQAA 85 (89)
T ss_dssp TTBCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCC
T ss_conf 78999999999999998745
No 226
>d1ls9a_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Green alga (Cladophora glomerata) [TaxId: 162068]}
Probab=48.53 E-value=4.1 Score=17.07 Aligned_cols=20 Identities=15% Similarity=0.182 Sum_probs=16.5
Q ss_pred ECCCCHHHHHHHHHHHHHCC
Q ss_conf 33489889999999997128
Q gi|254780799|r 694 GPFVSDIEVEKVVSHLKTQG 713 (806)
Q Consensus 694 g~~v~~~ev~~v~~~~~~q~ 713 (806)
+...||+||..|++|+++|.
T Consensus 67 ~~~Lsdeei~~l~aYi~~~a 86 (91)
T d1ls9a_ 67 ADRLDEDDIEAVSNYVYDQA 86 (91)
T ss_dssp TTTSCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHC
T ss_conf 36999999999999999885
No 227
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.49 E-value=5.6 Score=16.06 Aligned_cols=47 Identities=23% Similarity=0.461 Sum_probs=30.1
Q ss_pred EEEEECCCCHHHHHHHHHHHHHH-HHCCHH-H---EEEEEECCCHHHHHHCC
Q ss_conf 35530477406799999999999-829957-8---47888523100111027
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLL-YRMTPA-Q---CRLIMIDPKMLELSVYD 503 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlL-yk~~P~-e---vkliliDPK~vEls~Y~ 503 (806)
+++-|..|+|||-.+|.++..-- =...|. + .+-++.|.+.+.|.+++
T Consensus 5 i~lvG~~~vGKTsli~r~~~~~f~~~~~pTi~~~~~~~~~~~~~~~~l~i~D 56 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILD 56 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHHSCCCSCCCTTCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEE
T ss_conf 9999989978999999997398987637731001112112466321788851
No 228
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=48.39 E-value=6.3 Score=15.68 Aligned_cols=35 Identities=26% Similarity=0.493 Sum_probs=23.8
Q ss_pred HHHHHHHHHCCCEEEEHHHHHHCCCHH----HHHHHHHHHHHC
Q ss_conf 999999996598500014222001177----899999999977
Q gi|254780799|r 744 KQAVDIVLRDNKASISYIQRRLGIGYN----RAASIIENMEEK 782 (806)
Q Consensus 744 ~~a~~~v~~~~~~s~s~lqr~~~igy~----raar~~~~~e~~ 782 (806)
.++++.+++.-... +-.+++|-+ |.|..++.||+.
T Consensus 645 ~~~~~~il~~~~~~----~~~~~iG~tkVFlr~~~~~~~lE~~ 683 (684)
T d1lkxa_ 645 KQATELILQQHNID----KEEIRMGKTKVFIRNPTTLFYFEEK 683 (684)
T ss_dssp CHHHHHHHHTTCCC----GGGEEECSSBEEESSSHHHHHHHTC
T ss_pred HHHHHHHHHHCCCC----CCCEEECCCEEEECCHHHHHHHHCC
T ss_conf 99999999966988----0129964866987053179998634
No 229
>d1ynra1 a.3.1.1 (A:1-80) Cytochrome c552 {Hydrogenobacter thermophilus [TaxId: 940]}
Probab=48.21 E-value=5.2 Score=16.32 Aligned_cols=16 Identities=19% Similarity=0.351 Sum_probs=14.3
Q ss_pred CCHHHHHHHHHHHHHC
Q ss_conf 8988999999999712
Q gi|254780799|r 697 VSDIEVEKVVSHLKTQ 712 (806)
Q Consensus 697 v~~~ev~~v~~~~~~q 712 (806)
+||+||+.+++|++++
T Consensus 64 lsd~ei~~l~~yi~sL 79 (80)
T d1ynra1 64 VTDAEAKQLAQWILSI 79 (80)
T ss_dssp CCHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHC
T ss_conf 8999999999999975
No 230
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=48.08 E-value=6.4 Score=15.64 Aligned_cols=26 Identities=19% Similarity=0.311 Sum_probs=20.6
Q ss_pred CCEEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 20235530477406799999999999
Q gi|254780799|r 454 MPHLLIAGTTGSGKSVAINTMILSLL 479 (806)
Q Consensus 454 MPHLLIAGtTGSGKSV~iN~iI~SlL 479 (806)
|-=+-|.|.-||||+--++.++.-|-
T Consensus 1 Mkii~I~G~~gSGKTTli~~l~~~L~ 26 (165)
T d1xjca_ 1 MNVWQVVGYKHSGKTTLMEKWVAAAV 26 (165)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 90999980999989999999999998
No 231
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=47.80 E-value=3.6 Score=17.46 Aligned_cols=16 Identities=25% Similarity=0.630 Sum_probs=12.9
Q ss_pred EEEEEECCCCHHHHHH
Q ss_conf 2355304774067999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAI 471 (806)
Q Consensus 456 HLLIAGtTGSGKSV~i 471 (806)
+..|-|..|||||--.
T Consensus 2 ~I~i~G~pGSGKsT~a 17 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQA 17 (182)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
T ss_conf 8999889999879999
No 232
>d1fcdc2 a.3.1.4 (C:81-174) Flavocytochrome c sulfide dehydrogenase, FCSD, cytochrome subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}
Probab=47.73 E-value=5.6 Score=16.08 Aligned_cols=19 Identities=11% Similarity=0.151 Sum_probs=13.4
Q ss_pred CCCCHHHHHHHHHHHHHCC
Q ss_conf 3489889999999997128
Q gi|254780799|r 695 PFVSDIEVEKVVSHLKTQG 713 (806)
Q Consensus 695 ~~v~~~ev~~v~~~~~~q~ 713 (806)
.=.||+||..|++|+++|.
T Consensus 76 ~~LSd~di~alaaY~~Sqk 94 (94)
T d1fcdc2 76 KAEGDAGLDALFAFYASQQ 94 (94)
T ss_dssp GGSTHHHHHHHHHHHHHCC
T ss_pred HCCCHHHHHHHHHHHHHCC
T ss_conf 5289999999999998569
No 233
>d351ca_ a.3.1.1 (A:) Cytochrome c551 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=47.55 E-value=5.3 Score=16.21 Aligned_cols=16 Identities=31% Similarity=0.358 Sum_probs=14.3
Q ss_pred CCHHHHHHHHHHHHHC
Q ss_conf 8988999999999712
Q gi|254780799|r 697 VSDIEVEKVVSHLKTQ 712 (806)
Q Consensus 697 v~~~ev~~v~~~~~~q 712 (806)
+||+|+..|++|++++
T Consensus 66 lsd~ei~~la~Yi~Sl 81 (82)
T d351ca_ 66 VSDDEAQTLAKWVLSQ 81 (82)
T ss_dssp CCHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHC
T ss_conf 9999999999999866
No 234
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=47.52 E-value=4.6 Score=16.70 Aligned_cols=19 Identities=32% Similarity=0.662 Sum_probs=15.8
Q ss_pred EEEEEECCCCHHHHHHHHH
Q ss_conf 2355304774067999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTM 474 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~i 474 (806)
++++.|..|+|||--+|.+
T Consensus 19 KI~lvG~~~vGKTsLi~~l 37 (182)
T d1moza_ 19 RILILGLDGAGKTTILYRL 37 (182)
T ss_dssp EEEEEEETTSSHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHH
T ss_conf 9999999999889999887
No 235
>d1h2ka_ b.82.2.6 (A:) Hypoxia-inducible factor HIF ihhibitor (FIH1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.42 E-value=3.6 Score=17.48 Aligned_cols=22 Identities=32% Similarity=0.469 Sum_probs=15.8
Q ss_pred CHHHHCCCCCEEEECCCC-CEEE
Q ss_conf 457865887547736898-3258
Q gi|254780799|r 670 GAEQLLGQGDMLYMTGGG-RVQR 691 (806)
Q Consensus 670 gae~Llg~gdml~~~~~~-~~~r 691 (806)
+-|-.|.-|||||+|++- +-++
T Consensus 246 ~~~~~l~pGd~L~iP~~w~H~V~ 268 (335)
T d1h2ka_ 246 GYETVVGPGDVLYIPMYWWHHIE 268 (335)
T ss_dssp EEEEEECTTCEEEECTTCEEEEE
T ss_pred CEEEEECCCCEEEECCCCEEEEE
T ss_conf 14999889987862799708999
No 236
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=47.14 E-value=4.7 Score=16.60 Aligned_cols=149 Identities=15% Similarity=0.234 Sum_probs=73.7
Q ss_pred EECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEE--------------------EEEECCCH--H-HHHHCCCC
Q ss_conf 5410020235530477406799999999999829957847--------------------88852310--0-11102770
Q gi|254780799|r 449 ADLARMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCR--------------------LIMIDPKM--L-ELSVYDGI 505 (806)
Q Consensus 449 ~DLakMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evk--------------------liliDPK~--v-Els~Y~~i 505 (806)
.++.+==-+-+.|..|||||.-+|+|.-- .+|+.=+ +.++.+-. . .|++|+.+
T Consensus 27 ~~i~~Gei~~liGpnGaGKSTl~~~i~Gl----~~p~~G~I~~~G~~i~~~~~~~~~r~gi~~~~q~~~l~~~ltv~en~ 102 (240)
T d1ji0a_ 27 LKVPRGQIVTLIGANGAGKTTTLSAIAGL----VRAQKGKIIFNGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENL 102 (240)
T ss_dssp EEEETTCEEEEECSTTSSHHHHHHHHTTS----SCCSEEEEEETTEECTTCCHHHHHHTTEEEECSSCCCCTTSBHHHHH
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHHCC----CCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHH
T ss_conf 78889979999999998599999999678----88880389842443446608888874235567655457763699999
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 343122334304566899999999999999998708996899999-9998874478667754467765454322233223
Q gi|254780799|r 506 PNLLTPVVTNPQKAVTVLKWLVCEMEERYQKMSKIGVRNIDGFNL-KVAQYHNTGKKFNRTVQTGFDRKTGEAIYETEHF 584 (806)
Q Consensus 506 PHLl~pVvTd~~kA~~aL~w~V~EMe~RY~l~a~~~vRni~~yN~-k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (806)
-.... --.+.+.....+.|+..+..+ -+-..+..+.++.|=++ |+.-|++--
T Consensus 103 ~~~~~-~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~LSGG~~Qrv~iAraL~------------------------- 155 (240)
T d1ji0a_ 103 MMGAY-NRKDKEGIKRDLEWIFSLFPR-LKERLKQLGGTLSGGEQQMLAIGRALM------------------------- 155 (240)
T ss_dssp HGGGT-TCCCSSHHHHHHHHHHHHCHH-HHTTTTSBSSSSCHHHHHHHHHHHHHT-------------------------
T ss_pred HHHHH-HCCCHHHHHHHHHHHHHHHHC-HHHHHHCCHHHCCHHHHHHHHHHHHHH-------------------------
T ss_conf 98887-327888999999999987417-688875854338999999999999998-------------------------
Q ss_pred CCCCCCEEEEEHHHH-HHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCC
Q ss_conf 234698687763446-8888732100588999999866414237999965777
Q gi|254780799|r 585 DFQHMPYIVVVIDEM-ADLMMVARKDIESAVQRLAQMARASGIHVIMATQRPS 636 (806)
Q Consensus 585 ~~~~lp~ivviiDEl-aDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPs 636 (806)
.=|- +++.||= +-|=..+..++-+.|.+|++ .|.-.|+.|....
T Consensus 156 ---~~P~-lLllDEPt~gLD~~~~~~i~~~i~~l~~----~g~til~~tH~l~ 200 (240)
T d1ji0a_ 156 ---SRPK-LLMMDEPSLGLAPILVSEVFEVIQKINQ----EGTTILLVEQNAL 200 (240)
T ss_dssp ---TCCS-EEEEECTTTTCCHHHHHHHHHHHHHHHH----TTCCEEEEESCHH
T ss_pred ---HCCC-EEEECCCCCCCCHHHHHHHHHHHHHHHH----CCCEEEEEECCHH
T ss_conf ---2998-7400398867999999999999999996----8998999958899
No 237
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=47.13 E-value=6 Score=15.81 Aligned_cols=21 Identities=14% Similarity=0.300 Sum_probs=12.3
Q ss_pred EEEEEECCCCHHHHHHHHHHH
Q ss_conf 235530477406799999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~ 476 (806)
-+.+=|..++|||+.+++|.-
T Consensus 106 ~~~l~G~~~tGKS~f~~~i~~ 126 (267)
T d1u0ja_ 106 TIWLFGPATTGKTNIAEAIAH 126 (267)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
T ss_conf 999985898877899999999
No 238
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=46.51 E-value=5.8 Score=15.92 Aligned_cols=22 Identities=23% Similarity=0.492 Sum_probs=16.1
Q ss_pred EEEEEECCCCHHHHHHHHHHHH
Q ss_conf 2355304774067999999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILS 477 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~S 477 (806)
.+++...|||||+.|.-.-+..
T Consensus 44 d~iv~a~TGsGKT~~~~l~~~~ 65 (208)
T d1hv8a1 44 NIVAQARTGSGKTASFAIPLIE 65 (208)
T ss_dssp EEEEECCSSSSHHHHHHHHHHH
T ss_pred CEEEECHHCCCCCCEEECCCCC
T ss_conf 7464410034444002033321
No 239
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=46.47 E-value=5.7 Score=16.01 Aligned_cols=36 Identities=11% Similarity=0.070 Sum_probs=19.6
Q ss_pred HHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 9999999965985000142220011778999999999779868
Q gi|254780799|r 744 KQAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIG 786 (806)
Q Consensus 744 ~~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~ 786 (806)
-+++.--++.++.|-+-|.+ -+.|++-.+.+.|+--
T Consensus 325 ~~~l~~av~~G~i~~~rid~-------sv~Ril~~k~~lGlfd 360 (388)
T d1x38a1 325 ISILTGHVNGGVIPMSRIDD-------AVTRILRVKFTMGLFE 360 (388)
T ss_dssp HHHHHHHHHTTSSCHHHHHH-------HHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHCCCCCHHHHHH-------HHHHHHHHHHHHCCCC
T ss_conf 99999999859989999999-------9999999999948998
No 240
>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}
Probab=46.46 E-value=6.7 Score=15.47 Aligned_cols=77 Identities=22% Similarity=0.321 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCEEEEEECCCCCCHHHCCCCCHHHHCCCCCEEEECCCCCE
Q ss_conf 58899999986641423799996577753554355411025158764586642123388645786588754773689832
Q gi|254780799|r 610 IESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKANFPTRISFQVSSKIDSRTILGEQGAEQLLGQGDMLYMTGGGRV 689 (806)
Q Consensus 610 ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ikan~p~riaf~v~s~~dSrtild~~gae~Llg~gdml~~~~~~~~ 689 (806)
....|.|| +..||++++||=||...+..=+-+-+++. -++..+|| ..|-+ .++
T Consensus 23 ~~~~l~~l----~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~-------------~~i~~nG~--------~i~~~-~~~- 75 (285)
T d1nrwa_ 23 NENALRQA----QRDGIEVVVSTGRAHFDVMSIFEPLGIKT-------------WVISANGA--------VIHDP-EGR- 75 (285)
T ss_dssp HHHHHHHH----HHTTCEEEEECSSCHHHHHHHHGGGTCCC-------------EEEEGGGT--------EEECT-TCC-
T ss_pred HHHHHHHH----HHCCCEEEEECCCCHHHHHHHHHHHCCCC-------------EEEECCCE--------EEEEC-CCC-
T ss_conf 99999999----97889999997999899999999809985-------------89954731--------69956-874-
Q ss_pred EEEEECCCCHHHHHHHHHHHHHCCC
Q ss_conf 5888334898899999999971289
Q gi|254780799|r 690 QRIHGPFVSDIEVEKVVSHLKTQGE 714 (806)
Q Consensus 690 ~r~~g~~v~~~ev~~v~~~~~~q~~ 714 (806)
-++-..++.+++.++.+++++.+.
T Consensus 76 -~i~~~~i~~~~~~~i~~~~~~~~~ 99 (285)
T d1nrwa_ 76 -LYHHETIDKKRAYDILSWLESENY 99 (285)
T ss_dssp -EEEECCCCHHHHHHHHHHHHHTTC
T ss_pred -EEEECCCCHHHHHHHHHHHHHCCC
T ss_conf -356416888999999999997697
No 241
>d1kv9a1 a.3.1.6 (A:561-664) Quinoprotein alcohol dehydrogenase, C-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=46.27 E-value=2.3 Score=19.01 Aligned_cols=22 Identities=18% Similarity=0.200 Sum_probs=18.7
Q ss_pred CCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 4898899999999971289742
Q gi|254780799|r 696 FVSDIEVEKVVSHLKTQGEAKY 717 (806)
Q Consensus 696 ~v~~~ev~~v~~~~~~q~~~~y 717 (806)
=+||+||..|+.|+++|...+|
T Consensus 79 ~Lsd~ei~~v~aYi~s~~~~~~ 100 (104)
T d1kv9a1 79 SLKPEEVEQIKLYVMSREYEDY 100 (104)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCHH
T ss_conf 8999999999999998074556
No 242
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=46.14 E-value=6.2 Score=15.73 Aligned_cols=21 Identities=19% Similarity=0.468 Sum_probs=17.9
Q ss_pred EEEEEECCCCHHHHHHHHHHH
Q ss_conf 235530477406799999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~ 476 (806)
-+++.|..|+|||--+|.++.
T Consensus 18 kI~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 18 RILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp EEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 999999999899999999964
No 243
>d1cyja_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=46.07 E-value=5.2 Score=16.31 Aligned_cols=18 Identities=22% Similarity=0.226 Sum_probs=15.9
Q ss_pred CCCHHHHHHHHHHHHHCC
Q ss_conf 489889999999997128
Q gi|254780799|r 696 FVSDIEVEKVVSHLKTQG 713 (806)
Q Consensus 696 ~v~~~ev~~v~~~~~~q~ 713 (806)
-+||+||..|+.|+.+|.
T Consensus 66 ~Lsd~ei~~v~aYi~~~a 83 (90)
T d1cyja_ 66 RLSEEEIQAVAEYVFKQA 83 (90)
T ss_dssp TSCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHC
T ss_conf 899999999999999874
No 244
>d2fbha1 a.4.5.28 (A:8-144) Transcriptional regulator PA3341 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=45.85 E-value=6.8 Score=15.40 Aligned_cols=44 Identities=11% Similarity=0.251 Sum_probs=29.2
Q ss_pred HHHHHHHHCC-CEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHH
Q ss_conf 9999999659-8500014222001177899999999977986802
Q gi|254780799|r 745 QAVDIVLRDN-KASISYIQRRLGIGYNRAASIIENMEEKGVIGPA 788 (806)
Q Consensus 745 ~a~~~v~~~~-~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~ 788 (806)
.++..+...+ ..+.|-|-+++.+--+...|+++.||++|.|--.
T Consensus 32 ~iL~~l~~~~~~~t~~~la~~~~~~~~~vs~~v~~L~~~gli~r~ 76 (137)
T d2fbha1 32 LVLLHLARHRDSPTQRELAQSVGVEGPTLARLLDGLESQGLVRRL 76 (137)
T ss_dssp HHHHHHHHCSSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 999999876999769999999897898999999999985772005
No 245
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=45.77 E-value=4.3 Score=16.95 Aligned_cols=34 Identities=15% Similarity=0.403 Sum_probs=21.5
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECC
Q ss_conf 0020235530477406799999999999829957847888523
Q gi|254780799|r 452 ARMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDP 494 (806)
Q Consensus 452 akMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDP 494 (806)
.+-|=+.|-|..|||||.= +.+|.+ ...+..|+.
T Consensus 6 ~~~~iI~i~GppGSGKsT~-----a~~La~----~~g~~~is~ 39 (196)
T d1ukza_ 6 DQVSVIFVLGGPGAGKGTQ-----CEKLVK----DYSFVHLSA 39 (196)
T ss_dssp TTCEEEEEECSTTSSHHHH-----HHHHHH----HSSCEEEEH
T ss_pred CCCCEEEEECCCCCCHHHH-----HHHHHH----HHCCEEEEH
T ss_conf 9972899989999998999-----999999----859908853
No 246
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=45.74 E-value=6.8 Score=15.41 Aligned_cols=20 Identities=40% Similarity=0.542 Sum_probs=18.1
Q ss_pred EEEEEECCCCHHHHHHHHHH
Q ss_conf 23553047740679999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI 475 (806)
.++|.|-+.+|||-.||++.
T Consensus 114 ~v~vvG~PNvGKSsliN~L~ 133 (273)
T d1puja_ 114 RALIIGIPNVGKSTLINRLA 133 (273)
T ss_dssp EEEEEESTTSSHHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHH
T ss_conf 78998667544355542542
No 247
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.46 E-value=6.6 Score=15.50 Aligned_cols=21 Identities=29% Similarity=0.496 Sum_probs=17.8
Q ss_pred EEEEEECCCCHHHHHHHHHHH
Q ss_conf 235530477406799999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~ 476 (806)
-+++-|..|+|||-.||.++.
T Consensus 6 KivlvG~~~vGKTsli~~~~~ 26 (166)
T d1z0fa1 6 KYIIIGDMGVGKSCLLHQFTE 26 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
T ss_conf 999999999498999999972
No 248
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=45.20 E-value=6 Score=15.83 Aligned_cols=31 Identities=26% Similarity=0.494 Sum_probs=23.2
Q ss_pred CCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 69868776344688887321005889999998664
Q gi|254780799|r 588 HMPYIVVVIDEMADLMMVARKDIESAVQRLAQMAR 622 (806)
Q Consensus 588 ~lp~ivviiDElaDlmm~~~~~ve~~i~rlaq~ar 622 (806)
+-||=||++||+-- +..+|-..+.++-+-+|
T Consensus 123 ~~p~~Vvl~DEieK----~~~~v~~~ll~~l~~g~ 153 (315)
T d1qvra3 123 RRPYSVILFDEIEK----AHPDVFNILLQILDDGR 153 (315)
T ss_dssp HCSSEEEEESSGGG----SCHHHHHHHHHHHTTTE
T ss_pred HCCCCEEEEEHHHH----CCHHHHHHHHHHHCCCC
T ss_conf 49983799714754----07899989999861383
No 249
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=45.19 E-value=7 Score=15.33 Aligned_cols=48 Identities=23% Similarity=0.463 Sum_probs=27.4
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHH---HHCCHH---HEEEEEECCCHHHHHHCC
Q ss_conf 235530477406799999999999---829957---847888523100111027
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLL---YRMTPA---QCRLIMIDPKMLELSVYD 503 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlL---yk~~P~---evkliliDPK~vEls~Y~ 503 (806)
.++|.|..|+|||--||.++..-. |..+.. ..+-+-++-+.+++.+++
T Consensus 4 Ki~vvG~~~vGKTSli~~l~~~~~~~~~~~t~~~~~~~~~i~~~~~~~~~~i~D 57 (166)
T d1g16a_ 4 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWD 57 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHCCCCC-------CCEEEEEEESSSCEEEEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCEEEEEEEEE
T ss_conf 999999999678999999986889876377423037899999889899999998
No 250
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.89 E-value=6.9 Score=15.39 Aligned_cols=44 Identities=20% Similarity=0.283 Sum_probs=31.1
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCHHH---------EEEEEECCCHHHHHHCCC
Q ss_conf 355304774067999999999998299578---------478885231001110277
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLLYRMTPAQ---------CRLIMIDPKMLELSVYDG 504 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlLyk~~P~e---------vkliliDPK~vEls~Y~~ 504 (806)
+++-|..|+|||-.+|.++. ..-+++ .+.+.+|-+.+++..++.
T Consensus 6 i~lvG~~~vGKTsLi~r~~~----~~f~~~~~~t~~~~~~~~~~~~~~~~~l~~~d~ 58 (167)
T d1kaoa_ 6 VVVLGSGGVGKSALTVQFVT----GTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDT 58 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHH----SCCCSCCCTTCCEEEEEEEEETTEEEEEEEEEC
T ss_pred EEEECCCCCCHHHHHHHHHH----CCCCCCCCCCEEEEEEEEEECCCCEEEECCCCC
T ss_conf 99999899399999999971----999876688611355335404761576213457
No 251
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.88 E-value=4.2 Score=17.01 Aligned_cols=47 Identities=15% Similarity=0.345 Sum_probs=26.6
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHC-CHH---H--EEEEEECCCHHHHHHCC
Q ss_conf 35530477406799999999999829-957---8--47888523100111027
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLLYRM-TPA---Q--CRLIMIDPKMLELSVYD 503 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlLyk~-~P~---e--vkliliDPK~vEls~Y~ 503 (806)
+++.|.+|+|||-.+|.++..=-... .|. + .+-+.+|-+.+.|.+++
T Consensus 6 i~vvG~~~vGKTsli~~~~~~~f~~~~~~Ti~~~~~~~~~~~~~~~~~l~i~D 58 (170)
T d1i2ma_ 6 LVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWD 58 (170)
T ss_dssp EEEEECTTSSHHHHHHTTC-----CCEEEETTEEEEEEEECBTTCCEEEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999088999999984988854465300110001122223332221112
No 252
>d1qksa1 a.3.1.2 (A:9-135) N-terminal (heme c) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=44.86 E-value=7.1 Score=15.30 Aligned_cols=19 Identities=16% Similarity=0.029 Sum_probs=16.0
Q ss_pred CCCCHHHHHHHHHHHHHCC
Q ss_conf 3489889999999997128
Q gi|254780799|r 695 PFVSDIEVEKVVSHLKTQG 713 (806)
Q Consensus 695 ~~v~~~ev~~v~~~~~~q~ 713 (806)
...||+||..|+.|++.|.
T Consensus 105 ~~Lsd~ei~~l~~Yi~~~~ 123 (127)
T d1qksa1 105 GELSAEQVDLMANYLLLDP 123 (127)
T ss_dssp CCCCHHHHHHHHHHHHSCC
T ss_pred CCCCHHHHHHHHHHHHHCC
T ss_conf 8999999999999997678
No 253
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=44.65 E-value=6.7 Score=15.48 Aligned_cols=35 Identities=29% Similarity=0.373 Sum_probs=22.1
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHH
Q ss_conf 355304774067999999999998299578478885231001
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKMLE 498 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~vE 498 (806)
+++.|..|||||---+ .|-+.. ..+++.+|...+.
T Consensus 7 I~l~G~~GsGKSTia~-----~La~~l--g~~~~~~~~d~~~ 41 (176)
T d1zp6a1 7 LLLSGHPGSGKSTIAE-----ALANLP--GVPKVHFHSDDLW 41 (176)
T ss_dssp EEEEECTTSCHHHHHH-----HHHTCS--SSCEEEECTTHHH
T ss_pred EEEECCCCCCHHHHHH-----HHHHHH--CCCEEEECHHHHH
T ss_conf 9998899998899999-----999995--9997990689999
No 254
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.42 E-value=5.8 Score=15.92 Aligned_cols=19 Identities=32% Similarity=0.469 Sum_probs=15.9
Q ss_pred EEEEECCCCHHHHHHHHHH
Q ss_conf 3553047740679999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI 475 (806)
+-|.|.++||||--+|.+.
T Consensus 35 vsi~G~~~sGKS~llN~l~ 53 (277)
T d1f5na2 35 VAIVGLYRTGKSYLMNKLA 53 (277)
T ss_dssp EEEEEBTTSSHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHC
T ss_conf 9988999997999999980
No 255
>d1f1fa_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Arthrospira maxima [TaxId: 129910]}
Probab=44.35 E-value=5.9 Score=15.89 Aligned_cols=18 Identities=28% Similarity=0.451 Sum_probs=15.5
Q ss_pred CCHHHHHHHHHHHHHCCC
Q ss_conf 898899999999971289
Q gi|254780799|r 697 VSDIEVEKVVSHLKTQGE 714 (806)
Q Consensus 697 v~~~ev~~v~~~~~~q~~ 714 (806)
.||+||..|+.|+++|.+
T Consensus 68 Lsd~ei~~v~aYi~~~a~ 85 (88)
T d1f1fa_ 68 LSPLQIEDVAAYVVDQAE 85 (88)
T ss_dssp SCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
T ss_conf 999999999999999877
No 256
>d1xppa_ d.74.3.2 (A:) DNA-directed RNA polymerase subunit L, RpoL {Thermoplasma acidophilum [TaxId: 2303]}
Probab=44.30 E-value=7.2 Score=15.24 Aligned_cols=64 Identities=17% Similarity=0.356 Sum_probs=43.4
Q ss_pred HHHHHHHHHCCHHHEEEEEECCCHHHHHHCCCCHHHHC--C---CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
Q ss_conf 99999998299578478885231001110277034312--2---334304566899999999999999998708996899
Q gi|254780799|r 473 TMILSLLYRMTPAQCRLIMIDPKMLELSVYDGIPNLLT--P---VVTNPQKAVTVLKWLVCEMEERYQKMSKIGVRNIDG 547 (806)
Q Consensus 473 ~iI~SlLyk~~P~evkliliDPK~vEls~Y~~iPHLl~--p---VvTd~~kA~~aL~w~V~EMe~RY~l~a~~~vRni~~ 547 (806)
.+|.+.|++ || .|++.-|. +||-+. | |-|+...+..+|+.++...-..++-+. ..
T Consensus 28 n~L~~~L~~-----------~~-~V~fagY~-ipHPl~~~~~l~I~t~~~~p~~~l~~a~~~li~~~~~l~-------~~ 87 (99)
T d1xppa_ 28 RTLVEEILK-----------DD-QVDEARYY-IKHPVIDNPQIYVRVKSGKPQSAIKRAVRKLSKLYEDLG-------TQ 87 (99)
T ss_dssp HHHHHHHTT-----------CT-TEEEEEEE-CSSTTTSCCEEEEEESSSCHHHHHHHHHHHHHHHHHHHH-------HH
T ss_pred HHHHHHHHC-----------CC-CEEEEEEE-CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH-------HH
T ss_conf 999999946-----------99-81699874-588565872999993899979999999999999999999-------99
Q ss_pred HHHHHHHHH
Q ss_conf 999999887
Q gi|254780799|r 548 FNLKVAQYH 556 (806)
Q Consensus 548 yN~k~~~~~ 556 (806)
|++.+++.+
T Consensus 88 ~~~~~~~~~ 96 (99)
T d1xppa_ 88 FQKEFQRYE 96 (99)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 999999876
No 257
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=44.07 E-value=7.2 Score=15.24 Aligned_cols=19 Identities=26% Similarity=0.471 Sum_probs=16.5
Q ss_pred EEEEECCCCHHHHHHHHHH
Q ss_conf 3553047740679999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI 475 (806)
+++-|..|+|||--+|.++
T Consensus 5 v~liG~~~vGKSsLi~rl~ 23 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYC 23 (164)
T ss_dssp EEEECSTTSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
T ss_conf 9999989959899999998
No 258
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=44.02 E-value=3.5 Score=17.57 Aligned_cols=18 Identities=44% Similarity=0.780 Sum_probs=14.7
Q ss_pred EEEEECCCCHHHHHHHHH
Q ss_conf 355304774067999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTM 474 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~i 474 (806)
.-|+|-.|||||--++.+
T Consensus 12 I~ieG~~GsGKTTl~~~L 29 (197)
T d2vp4a1 12 VLIEGNIGSGKTTYLNHF 29 (197)
T ss_dssp EEEECSTTSCHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHH
T ss_conf 998899998889999999
No 259
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.77 E-value=7.3 Score=15.18 Aligned_cols=22 Identities=23% Similarity=0.428 Sum_probs=18.1
Q ss_pred EEEEEECCCCHHHHHHHHHHHH
Q ss_conf 2355304774067999999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILS 477 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~S 477 (806)
-+++-|..|+|||--||.++..
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~~ 29 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVKG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999994989999999859
No 260
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=43.74 E-value=7.3 Score=15.18 Aligned_cols=14 Identities=14% Similarity=0.252 Sum_probs=7.6
Q ss_pred HHHHHHHHHHCCCH
Q ss_conf 34468888732100
Q gi|254780799|r 596 IDEMADLMMVARKD 609 (806)
Q Consensus 596 iDElaDlmm~~~~~ 609 (806)
-+++.+||......
T Consensus 527 ~~~~~~ll~~S~~~ 540 (710)
T d1br2a2 527 NDNVTSLLNQSSDK 540 (710)
T ss_dssp CHHHHHHHHTCSSH
T ss_pred HHHHHHHHHHCCCH
T ss_conf 69999999858868
No 261
>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}
Probab=43.50 E-value=7.4 Score=15.15 Aligned_cols=85 Identities=15% Similarity=0.217 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHH-CCCCEEEEEECCCCCCHHHCCCCCHHHHCCCCCEEEECCCCCE
Q ss_conf 889999998664142379999657775355435541-1025158764586642123388645786588754773689832
Q gi|254780799|r 611 ESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKA-NFPTRISFQVSSKIDSRTILGEQGAEQLLGQGDMLYMTGGGRV 689 (806)
Q Consensus 611 e~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ika-n~p~riaf~v~s~~dSrtild~~gae~Llg~gdml~~~~~~~~ 689 (806)
+..+.+|.+. ++.||++++||-||--.+ -.+.+. +++. -.....+|+ ...|-+.|-+.+.
T Consensus 31 ~~~~~al~~l-~~~Gi~v~i~TGR~~~~~-~~~~~~l~~~~------------~~~~~~~~i---~~~g~~~~~~~~~-- 91 (283)
T d2b30a1 31 SENIDAIKEA-IEKGYMVSICTGRSKVGI-LSAFGEENLKK------------MNFYGMPGV---YINGTIVYDQIGY-- 91 (283)
T ss_dssp HHHHHHHHHH-HHHTCEEEEECSSCHHHH-HHHHCHHHHHH------------HTCCSCSEE---EGGGTEEECTTCC--
T ss_pred HHHHHHHHHH-HHCCCEEEEECCCCHHHH-HHHHHHHCCCC------------CCCCCCCEE---EEEEEEEECCCCC--
T ss_conf 9999999999-988998999869998999-99999847665------------455577437---8754589848996--
Q ss_pred EEEEECCCCHHHHHHHHHHHHHCCCC
Q ss_conf 58883348988999999999712897
Q gi|254780799|r 690 QRIHGPFVSDIEVEKVVSHLKTQGEA 715 (806)
Q Consensus 690 ~r~~g~~v~~~ev~~v~~~~~~q~~~ 715 (806)
.++..+++..++.++.++++.++..
T Consensus 92 -~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (283)
T d2b30a1 92 -TLLDETIETDVYAELISYLVEKNLV 116 (283)
T ss_dssp -EEEECCCCHHHHHHHHHHHHHTTCG
T ss_pred -EEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf -8310256878889999887750665
No 262
>d1cc5a_ a.3.1.1 (A:) Cytochrome c5 {Azotobacter vinelandii [TaxId: 354]}
Probab=43.46 E-value=6.3 Score=15.65 Aligned_cols=16 Identities=19% Similarity=0.227 Sum_probs=13.7
Q ss_pred CCCHHHHHHHHHHHHH
Q ss_conf 4898899999999971
Q gi|254780799|r 696 FVSDIEVEKVVSHLKT 711 (806)
Q Consensus 696 ~v~~~ev~~v~~~~~~ 711 (806)
-.||+||..||+|++.
T Consensus 67 ~Lsd~ei~~vv~Yi~~ 82 (83)
T d1cc5a_ 67 DCSDDELKAAIGKMSG 82 (83)
T ss_dssp SCCHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHH
T ss_conf 9999999999999862
No 263
>d1f1ca_ a.3.1.1 (A:) Photosystem II associated cytochrome c549 {Arthrospira maxima [TaxId: 129910]}
Probab=43.25 E-value=6.2 Score=15.72 Aligned_cols=18 Identities=17% Similarity=0.112 Sum_probs=16.0
Q ss_pred CCCHHHHHHHHHHHHHCC
Q ss_conf 489889999999997128
Q gi|254780799|r 696 FVSDIEVEKVVSHLKTQG 713 (806)
Q Consensus 696 ~v~~~ev~~v~~~~~~q~ 713 (806)
-+||+||..|+.|+++|.
T Consensus 104 ~Lsdedi~ai~aYi~~~p 121 (129)
T d1f1ca_ 104 NISEDDLYNVAGYILLQP 121 (129)
T ss_dssp SCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCC
T ss_conf 699999999999999756
No 264
>d1im5a_ c.33.1.3 (A:) Pyrazinamidase/nicotinamidase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=43.15 E-value=7.5 Score=15.12 Aligned_cols=108 Identities=16% Similarity=0.240 Sum_probs=50.2
Q ss_pred EEEHHHHHHHHH------HCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCEEEEEECCCCCCHHHC
Q ss_conf 776344688887------32100588999999866414237999965777535543554110251587645866421233
Q gi|254780799|r 593 VVVIDEMADLMM------VARKDIESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKANFPTRISFQVSSKIDSRTIL 666 (806)
Q Consensus 593 vviiDElaDlmm------~~~~~ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ikan~p~riaf~v~s~~dSrtil 666 (806)
+||||==-|++= -...++-..|.||.+.||+.|++.|...+..--+-.. .+.+ ....-...+-
T Consensus 5 LlvID~Q~~f~~~~~~~~~~~~~~~~~i~~li~~ar~~g~~Vi~~~~~~~~~~~~------~~~~-----~~~~~~~~~~ 73 (179)
T d1im5a_ 5 LIVVDMQRDFMPGGALPVPEGDKIIPKVNEYIRKFKEKGALIVATRDWHPENHIS------FRER-----GGPWPRHCVQ 73 (179)
T ss_dssp EEEECCBGGGSTTSSSCCTTGGGGHHHHHHHHHHHHHTTCEEEEEEECBCTTCTT------BGGG-----TCSBCSCSBT
T ss_pred EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC------CCCC-----CCCCCCCCCC
T ss_conf 9999570685388855676889999999999999998699699985024764521------0014-----6866432358
Q ss_pred CCCCHHHHCCC-CCEEEECCCCC-EEEEEECCCCHHHHHHHHHHHHHCCCC
Q ss_conf 88645786588-75477368983-258883348988999999999712897
Q gi|254780799|r 667 GEQGAEQLLGQ-GDMLYMTGGGR-VQRIHGPFVSDIEVEKVVSHLKTQGEA 715 (806)
Q Consensus 667 d~~gae~Llg~-gdml~~~~~~~-~~r~~g~~v~~~ev~~v~~~~~~q~~~ 715 (806)
+..|+|-.... .|....+.... -.+-.++|-+. ..-.+++.++-.
T Consensus 74 g~~~~~~~~~~~~~~~~~~~~~~~~K~~~s~f~~t----~L~~~Lr~~gi~ 120 (179)
T d1im5a_ 74 NTPGAEFVVDLPEDAVIISKATEPDKEAYSGFEGT----DLAKILRGNGVK 120 (179)
T ss_dssp TSGGGSBCSCCCTTCEEEEECCSTTCCCCSTTTTS----SHHHHHHHTTCC
T ss_pred CCCHHHHCCCCCCHHHCCCCCEEEEECCCCCCCHH----HHHHHHHHCCCC
T ss_conf 99403204555510001256512310212442035----789999877999
No 265
>d1e29a_ a.3.1.1 (A:) Photosystem II associated cytochrome c549 {Synechocystis sp., pcc 6803 [TaxId: 1143]}
Probab=43.14 E-value=6.3 Score=15.70 Aligned_cols=18 Identities=6% Similarity=-0.099 Sum_probs=16.0
Q ss_pred CCCHHHHHHHHHHHHHCC
Q ss_conf 489889999999997128
Q gi|254780799|r 696 FVSDIEVEKVVSHLKTQG 713 (806)
Q Consensus 696 ~v~~~ev~~v~~~~~~q~ 713 (806)
-.||+||..|+.|+++|.
T Consensus 106 ~Lsdedi~~vaaYi~~qp 123 (135)
T d1e29a_ 106 NYTEDDIFDVAGYTLIAP 123 (135)
T ss_dssp TCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCC
T ss_conf 899999999999998665
No 266
>d1nira1 a.3.1.2 (A:6-117) N-terminal (heme c) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=42.89 E-value=6.1 Score=15.79 Aligned_cols=17 Identities=6% Similarity=0.128 Sum_probs=15.5
Q ss_pred CCHHHHHHHHHHHHHCC
Q ss_conf 89889999999997128
Q gi|254780799|r 697 VSDIEVEKVVSHLKTQG 713 (806)
Q Consensus 697 v~~~ev~~v~~~~~~q~ 713 (806)
.||+||..|+.|++++.
T Consensus 92 Lsd~ei~~l~~Yv~~~~ 108 (112)
T d1nira1 92 LSKEQITLMAKYIQHTP 108 (112)
T ss_dssp SCHHHHHHHHHHTTSCC
T ss_pred CCHHHHHHHHHHHHHCC
T ss_conf 99999999999997778
No 267
>d1m70a1 a.3.1.4 (A:1-92) Cytochrome c4 {Pseudomonas stutzeri [TaxId: 316]}
Probab=42.69 E-value=7.4 Score=15.15 Aligned_cols=21 Identities=19% Similarity=0.208 Sum_probs=16.4
Q ss_pred ECCCCHHHHHHHHHHHHHCCC
Q ss_conf 334898899999999971289
Q gi|254780799|r 694 GPFVSDIEVEKVVSHLKTQGE 714 (806)
Q Consensus 694 g~~v~~~ev~~v~~~~~~q~~ 714 (806)
+.-.||+|+..|+.|+++|..
T Consensus 70 ~~~Lsd~ei~dl~aYi~sl~~ 90 (92)
T d1m70a1 70 LDPLSDQDLEDIAAYFSSQKG 90 (92)
T ss_dssp TTTCCHHHHHHHHHHHHHSCC
T ss_pred HHHCCHHHHHHHHHHHHHCCC
T ss_conf 866899999999999997789
No 268
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=42.62 E-value=7.6 Score=15.06 Aligned_cols=32 Identities=19% Similarity=0.327 Sum_probs=23.6
Q ss_pred CCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 469868776344688887321005889999998664
Q gi|254780799|r 587 QHMPYIVVVIDEMADLMMVARKDIESAVQRLAQMAR 622 (806)
Q Consensus 587 ~~lp~ivviiDElaDlmm~~~~~ve~~i~rlaq~ar 622 (806)
.+.||-|+..||+-= ++.+|-...-.+-+-+|
T Consensus 118 ~~~~~~vvl~DeieK----a~~~V~~~lLqild~G~ 149 (315)
T d1r6bx3 118 IKHPHAVLLLDEIEK----AHPDVFNILLQVMDNGT 149 (315)
T ss_dssp HHCSSEEEEEETGGG----SCHHHHHHHHHHHHHSE
T ss_pred HHCCCCHHHHCCCCC----CCCHHHHHHHHHHCCCE
T ss_conf 738543022122230----16337665677621460
No 269
>d2ev0a1 a.4.5.24 (A:2-62) Manganese transport regulator MntR {Bacillus subtilis [TaxId: 1423]}
Probab=42.41 E-value=7.7 Score=15.04 Aligned_cols=46 Identities=13% Similarity=0.218 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 0389999999965985000142220011778999999999779868
Q gi|254780799|r 741 DLYKQAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIG 786 (806)
Q Consensus 741 ~l~~~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~ 786 (806)
+..+.-.++..+.+.++++-|-++|.+--.-+.+++..|+++|.|-
T Consensus 7 dYLk~I~~l~~~~~~v~~~~iA~~L~vs~~SVs~mikrL~~~GlV~ 52 (61)
T d2ev0a1 7 DYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLI 52 (61)
T ss_dssp HHHHHHHHHHHHHSSCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEE
T ss_conf 9999999998358975099999995899515999999998889977
No 270
>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}
Probab=42.12 E-value=6.2 Score=15.74 Aligned_cols=57 Identities=23% Similarity=0.341 Sum_probs=36.1
Q ss_pred EEEEHH--------HHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHH-HH-H-CCCCE
Q ss_conf 877634--------4688887321005889999998664142379999657775355435-54-1-10251
Q gi|254780799|r 592 IVVVID--------EMADLMMVARKDIESAVQRLAQMARASGIHVIMATQRPSVDVITGT-IK-A-NFPTR 651 (806)
Q Consensus 592 ivviiD--------ElaDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~-ik-a-n~p~r 651 (806)
|||+-+ +-.||+..-.+-+.+.+..|++.|.-. ..+++.|- | |||+|-+ .| | +||.|
T Consensus 83 vViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~-~~vivvsN-P-vDv~t~~a~k~asg~p~~ 150 (154)
T d1y7ta1 83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKD-VKVLVVGN-P-ANTNALIAYKNAPGLNPR 150 (154)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTT-CEEEECSS-S-HHHHHHHHHHTCTTSCGG
T ss_pred EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC-CEEEEECC-C-HHHHHHHHHHHCCCCCHH
T ss_conf 78760576789998578999998999999999999758998-08999469-3-888999999986899687
No 271
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.12 E-value=7.7 Score=15.01 Aligned_cols=44 Identities=20% Similarity=0.388 Sum_probs=29.5
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCCHH---------HEEEEEECCCHHHHHHCC
Q ss_conf 235530477406799999999999829957---------847888523100111027
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYRMTPA---------QCRLIMIDPKMLELSVYD 503 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk~~P~---------evkliliDPK~vEls~Y~ 503 (806)
-++|-|..|+|||--||.++. +.-++ ..+-+.+|-+.+.+.+++
T Consensus 7 KivviG~~~vGKTsli~~~~~----~~f~~~~~~ti~~~~~~~~~~~~~~~~~~~~d 59 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYTT----NAFPGEYIPTVFDNYSANVMVDGKPVNLGLWD 59 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHH----SSCCSSCCCCSCCEEEEEEEETTEEEEEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHH----CCCCCCCCCCEEECEEEEEECCCCCEEEEEEC
T ss_conf 999999999799999999974----98985446631100011000368634898603
No 272
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=42.00 E-value=7.8 Score=14.99 Aligned_cols=34 Identities=29% Similarity=0.460 Sum_probs=22.8
Q ss_pred CC-EEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECC
Q ss_conf 20-235530477406799999999999829957847888523
Q gi|254780799|r 454 MP-HLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDP 494 (806)
Q Consensus 454 MP-HLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDP 494 (806)
.| .+|..|-+|+|||-...++-- -++ +.++.|+.
T Consensus 31 ~P~~ilL~GpPGtGKT~la~~la~-~~~------~~~~~i~~ 65 (273)
T d1gvnb_ 31 SPTAFLLGGQPGSGKTSLRSAIFE-ETQ------GNVIVIDN 65 (273)
T ss_dssp SCEEEEEECCTTSCTHHHHHHHHH-HTT------TCCEEECT
T ss_pred CCEEEEEECCCCCCHHHHHHHHHH-HHH------CCEEEEEC
T ss_conf 997999889799889999999999-865------15489832
No 273
>d1kx7a_ a.3.1.1 (A:) Mono-heme c-type cytochrome ScyA {Shewanella putrefaciens [TaxId: 24]}
Probab=41.96 E-value=6.3 Score=15.65 Aligned_cols=17 Identities=6% Similarity=0.149 Sum_probs=14.4
Q ss_pred CCCHHHHHHHHHHHHHC
Q ss_conf 48988999999999712
Q gi|254780799|r 696 FVSDIEVEKVVSHLKTQ 712 (806)
Q Consensus 696 ~v~~~ev~~v~~~~~~q 712 (806)
-.||+||..|++|++..
T Consensus 64 ~Lsd~ei~~v~~Yi~~a 80 (81)
T d1kx7a_ 64 DCTDEDYKAAIEFMSKA 80 (81)
T ss_dssp SCCHHHHHHHHHHHSSC
T ss_pred CCCHHHHHHHHHHHHHC
T ss_conf 89999999999999866
No 274
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=41.64 E-value=7.9 Score=14.95 Aligned_cols=26 Identities=23% Similarity=0.154 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 56689999999999999999870899
Q gi|254780799|r 518 KAVTVLKWLVCEMEERYQKMSKIGVR 543 (806)
Q Consensus 518 kA~~aL~w~V~EMe~RY~l~a~~~vR 543 (806)
....+.+-.-+|...|++.|.+.+-.
T Consensus 249 ~~~~~~~~i~~~~~~~~~~~~~~~~~ 274 (408)
T d1c4oa1 249 GLEEILKEIEKELWERVRYFEERGEV 274 (408)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 57888887656689999999873741
No 275
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]}
Probab=40.95 E-value=8 Score=14.88 Aligned_cols=41 Identities=17% Similarity=0.197 Sum_probs=25.2
Q ss_pred CCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 661353320012455563256654578999999742486328998
Q gi|254780799|r 310 PSKEILSTSQSPVNQMTFSPKVMQNNACTLKSVLSDFGIQGEIVN 354 (806)
Q Consensus 310 PsLdLL~~~~~~~~~~~~s~eeL~~nA~lLE~tL~dFGVe~~Vv~ 354 (806)
..++||++--... +.|.+| ++.++.|++.|++.|++++.+.
T Consensus 4 e~lell~~Lv~i~---S~s~~e-~~~a~~l~~~l~~~G~~~~~~~ 44 (262)
T d1vgya1 4 QSLELAKELISRP---SVTPDD-RDCQKLMAERLHKIGFAAEEMH 44 (262)
T ss_dssp HHHHHHHHHHTSC---CBTTCC-TTHHHHHHHHHHTTTCEEEECC
T ss_pred HHHHHHHHHHCCC---CCCCCH-HHHHHHHHHHHHHCCCEEEEEE
T ss_conf 9999999995899---979897-9999999999997799389998
No 276
>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}
Probab=40.73 E-value=7.5 Score=15.10 Aligned_cols=23 Identities=9% Similarity=-0.237 Sum_probs=18.0
Q ss_pred EEEE-ECCCCHHHHHHHHHHHHHC
Q ss_conf 5888-3348988999999999712
Q gi|254780799|r 690 QRIH-GPFVSDIEVEKVVSHLKTQ 712 (806)
Q Consensus 690 ~r~~-g~~v~~~ev~~v~~~~~~q 712 (806)
.|+= ..+++.+||+++++++++-
T Consensus 333 iRiS~~~~~t~e~V~~Li~~~~~~ 356 (360)
T d1w23a_ 333 CRASIYNAVPIDACIALRELMIQF 356 (360)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 789950899999999999999999
No 277
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=40.69 E-value=5.1 Score=16.37 Aligned_cols=15 Identities=40% Similarity=0.760 Sum_probs=11.9
Q ss_pred EEEEECCCCHHHHHH
Q ss_conf 355304774067999
Q gi|254780799|r 457 LLIAGTTGSGKSVAI 471 (806)
Q Consensus 457 LLIAGtTGSGKSV~i 471 (806)
++.=|.|||||+--+
T Consensus 86 i~aYGqtgSGKT~T~ 100 (342)
T d1f9va_ 86 IFAYGQTGSGKTFTM 100 (342)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCCCCC
T ss_conf 554422677665232
No 278
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=40.63 E-value=6.9 Score=15.39 Aligned_cols=53 Identities=9% Similarity=0.215 Sum_probs=30.2
Q ss_pred EEEHHH-HHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCEEEEE
Q ss_conf 776344-688887321005889999998664142379999657775355435541102515876
Q gi|254780799|r 593 VVVIDE-MADLMMVARKDIESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKANFPTRISFQ 655 (806)
Q Consensus 593 vviiDE-laDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ikan~p~riaf~ 655 (806)
+++.|| .+-|=....+++.+.|.+|. +.-|+-.|+.|+-+.. =.-+-.||++=
T Consensus 147 illlDEPts~LD~~~~~~i~~~i~~l~---~~~g~tvi~vtHd~~~-------~~~~adri~vm 200 (240)
T d2onka1 147 LLLLDEPLSAVDLKTKGVLMEELRFVQ---REFDVPILHVTHDLIE-------AAMLADEVAVM 200 (240)
T ss_dssp SBEEESTTSSCCHHHHHHHHHHHHHHH---HHHTCCEEEEESCHHH-------HHHHCSEEEEE
T ss_pred CEEECCCCCCCCHHHHHHHHHHHHHHH---HHCCCEEEEEECCHHH-------HHHHCCEEEEE
T ss_conf 067528655588799999999999998---7439769998189999-------99969999999
No 279
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.40 E-value=8.2 Score=14.82 Aligned_cols=50 Identities=18% Similarity=0.286 Sum_probs=31.2
Q ss_pred CC--EEEEEECCCCHHHHHHHHHHHHHHHHCCHH----HEEEEEECCCHHHHHHCC
Q ss_conf 20--235530477406799999999999829957----847888523100111027
Q gi|254780799|r 454 MP--HLLIAGTTGSGKSVAINTMILSLLYRMTPA----QCRLIMIDPKMLELSVYD 503 (806)
Q Consensus 454 MP--HLLIAGtTGSGKSV~iN~iI~SlLyk~~P~----evkliliDPK~vEls~Y~ 503 (806)
|| .+++-|..|+|||--+|.++..=--...|. -.|-+-||-+.+.|.+++
T Consensus 3 ~p~~ki~vlG~~~vGKTsLi~~~~~~~f~~~~~t~~~~~~~~i~v~~~~~~l~i~D 58 (175)
T d2bmja1 3 IPELRLGVLGDARSGKSSLIHRFLTGSYQVLEKTESEQYKKEMLVDGQTHLVLIRE 58 (175)
T ss_dssp CCEEEEEEECCTTTTHHHHHHHHHHSCCCCCCCSSCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCEEEEEEEEE
T ss_conf 88379999998997899999999719787767755404778740485689999850
No 280
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=40.40 E-value=5.8 Score=15.95 Aligned_cols=16 Identities=19% Similarity=0.461 Sum_probs=12.7
Q ss_pred EEEEEECCCCHHHHHH
Q ss_conf 2355304774067999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAI 471 (806)
Q Consensus 456 HLLIAGtTGSGKSV~i 471 (806)
.+++-|.-|||||---
T Consensus 2 ~I~i~G~pGSGKsT~~ 17 (179)
T d1e4va1 2 RIILLGAPVAGKGTQA 17 (179)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
T ss_conf 8999879999989999
No 281
>d1j2ra_ c.33.1.3 (A:) Hypothetical protein YecD {Escherichia coli [TaxId: 562]}
Probab=40.18 E-value=8.2 Score=14.80 Aligned_cols=31 Identities=29% Similarity=0.308 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHHHHHHCCEEEEEEECCCCCC
Q ss_conf 0058899999986641423799996577753
Q gi|254780799|r 608 KDIESAVQRLAQMARASGIHVIMATQRPSVD 638 (806)
Q Consensus 608 ~~ve~~i~rlaq~ara~GiHli~aTqrPsvd 638 (806)
.++-..|.+|.+.||+.|+..|..++..+-|
T Consensus 31 ~~~~~~i~~l~~~ar~~g~pVi~~~~~~~~~ 61 (188)
T d1j2ra_ 31 DEVVNRAGKLAAKFRASGQPVFLVRVGWSAD 61 (188)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEECCCTT
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEEEECCC
T ss_conf 9999999999999998699189987530788
No 282
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.14 E-value=8.3 Score=14.79 Aligned_cols=51 Identities=20% Similarity=0.298 Sum_probs=31.6
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHH-HCCHH----HEEEEEECCCHHHHHHCC
Q ss_conf 0202355304774067999999999998-29957----847888523100111027
Q gi|254780799|r 453 RMPHLLIAGTTGSGKSVAINTMILSLLY-RMTPA----QCRLIMIDPKMLELSVYD 503 (806)
Q Consensus 453 kMPHLLIAGtTGSGKSV~iN~iI~SlLy-k~~P~----evkliliDPK~vEls~Y~ 503 (806)
|.--++|.|..|+|||--+|.++..--- ...|. -.+.+.+|-+.+.|.+++
T Consensus 3 k~~Kv~liG~~~vGKTsLl~~~~~~~f~~~~~~t~~~~~~~~~~~~~~~~~l~i~d 58 (167)
T d1xtqa1 3 KSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVD 58 (167)
T ss_dssp EEEEEEEEESTTSSHHHHHHHHHHSCCCSCCCSSCCEEEEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCEEEECCCEEEEEEECC
T ss_conf 63389999989929899999997198885447542113103883176798763011
No 283
>d2btoa1 c.32.1.1 (A:3-246) Tubulin alpha-subunit {Prosthecobacter dejongeii [TaxId: 48465]}
Probab=40.12 E-value=4.5 Score=16.76 Aligned_cols=81 Identities=26% Similarity=0.368 Sum_probs=45.9
Q ss_pred EEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHCCCCHHH-HCCCCCCHHHHHHHHHHHHHHH-------
Q ss_conf 53047740679999999999982995784788852310011102770343-1223343045668999999999-------
Q gi|254780799|r 459 IAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKMLELSVYDGIPNL-LTPVVTNPQKAVTVLKWLVCEM------- 530 (806)
Q Consensus 459 IAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~vEls~Y~~iPHL-l~pVvTd~~kA~~aL~w~V~EM------- 530 (806)
+||-|||| +-+.|+..|--.-|+..++ .|--.|+. ...||++|=.++-+|+|.....
T Consensus 141 l~GGTGSG----lgs~l~e~l~d~yp~~~~~-----------~~~V~P~~~~~~~vvqpYNsiLsl~~L~e~sD~~~~~d 205 (244)
T d2btoa1 141 IGGGTGSG----FGALLIESLKEKYGEIPVL-----------SCAVLPSPQVSSVVTEPYNTVFALNTLRRSADACLIFD 205 (244)
T ss_dssp SSSSHHHH----HHHHHHHHHHHHTCSSCEE-----------EEEEECCCCSSCEESHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred ECCCCCCC----HHHHHHHHHHHHHCCCEEE-----------EEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEE
T ss_conf 02355532----1467889988871673378-----------78898548778600113298998999985096699942
Q ss_pred -HHHHHHHH-HCCCC--CHHHHHHHHHH
Q ss_conf -99999998-70899--68999999998
Q gi|254780799|r 531 -EERYQKMS-KIGVR--NIDGFNLKVAQ 554 (806)
Q Consensus 531 -e~RY~l~a-~~~vR--ni~~yN~k~~~ 554 (806)
|.-|++-. .++.. +.+..|+-|.+
T Consensus 206 N~al~~i~~~~~~~~~~s~~~lN~~Ia~ 233 (244)
T d2btoa1 206 NEALFDLAHRKWNIESPTVDDLNLLITE 233 (244)
T ss_dssp HHHHHHHHHHTSCCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf 6999999998638999998999999999
No 284
>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=40.04 E-value=7.8 Score=14.96 Aligned_cols=76 Identities=12% Similarity=0.169 Sum_probs=37.6
Q ss_pred HHHHCCEEEEEEECCCCCCCCCHHHH-HCCCCEEEEEECCCCCCHHHCCCCCHHHHCCCCCEEEECCC-C-CEEEEEECC
Q ss_conf 66414237999965777535543554-11025158764586642123388645786588754773689-8-325888334
Q gi|254780799|r 620 MARASGIHVIMATQRPSVDVITGTIK-ANFPTRISFQVSSKIDSRTILGEQGAEQLLGQGDMLYMTGG-G-RVQRIHGPF 696 (806)
Q Consensus 620 ~ara~GiHli~aTqrPsvdvitg~ik-an~p~riaf~v~s~~dSrtild~~gae~Llg~gdml~~~~~-~-~~~r~~g~~ 696 (806)
.+|++||++++||=||--.+-. +++ -+++. .+.-.+||.-.-..|...+..-. . .-.+++-..
T Consensus 28 ~l~~~G~~~~~aTGR~~~~~~~-~~~~~~~~~-------------~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (243)
T d1wzca1 28 ELKDMGFEIIFNSSKTRAEQEY-YRKELEVET-------------PFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELG 93 (243)
T ss_dssp HHHHTTEEEEEECSSCHHHHHH-HHHHHTCCS-------------CEEETTTTEEEECTTCCC----------CEEEECS
T ss_pred HHHHCCCEEEEEECCCHHHHHH-HHHHHCCCC-------------CCCCCCCCEEECCCCCEECCCCHHHHHHHHHHHHH
T ss_conf 9998899999991988899999-999836442-------------10014784897089843035430677889999875
Q ss_pred CCHHHHHHHHHHH
Q ss_conf 8988999999999
Q gi|254780799|r 697 VSDIEVEKVVSHL 709 (806)
Q Consensus 697 v~~~ev~~v~~~~ 709 (806)
...+.+..+....
T Consensus 94 ~~~~~~~~~~~~~ 106 (243)
T d1wzca1 94 IRVEKIREELKKL 106 (243)
T ss_dssp CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 2199999999765
No 285
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=39.96 E-value=8.3 Score=14.77 Aligned_cols=23 Identities=35% Similarity=0.471 Sum_probs=18.2
Q ss_pred CCCEEEEEECCCCHHHHHHHHHH
Q ss_conf 02023553047740679999999
Q gi|254780799|r 453 RMPHLLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 453 kMPHLLIAGtTGSGKSV~iN~iI 475 (806)
+-..+|+.|..|+|||--++-+-
T Consensus 5 ~~~KilllG~~~vGKTsll~~~~ 27 (221)
T d1azta2 5 ATHRLLLLGAGESGKSTIVKQMR 27 (221)
T ss_dssp HSEEEEEECSTTSSHHHHHHHHH
T ss_pred HCCEEEEECCCCCCHHHHHHHHH
T ss_conf 34779999899998899999895
No 286
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=39.83 E-value=8.3 Score=14.76 Aligned_cols=44 Identities=16% Similarity=0.374 Sum_probs=28.7
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCCHHH---------EEEEEECCCHHHHHHCC
Q ss_conf 2355304774067999999999998299578---------47888523100111027
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYRMTPAQ---------CRLIMIDPKMLELSVYD 503 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk~~P~e---------vkliliDPK~vEls~Y~ 503 (806)
-+++-|..|+|||--+|.++. ..-+++ .+-+.+|-+.++|.+++
T Consensus 6 KivlvG~~~vGKTsli~~~~~----~~f~~~~~~T~~~~~~~~~~~~~~~~~l~i~d 58 (168)
T d1u8za_ 6 KVIMVGSGGVGKSALTLQFMY----DEFVEDYEPTKADSYRKKVVLDGEEVQIDILD 58 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHH----SCCCSCCCTTCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHH----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 999999899588999999972----99986547753431011113454332222334
No 287
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=39.66 E-value=6.8 Score=15.43 Aligned_cols=52 Identities=17% Similarity=0.135 Sum_probs=27.3
Q ss_pred HHCCCCCHHHHCCCCCEEEECCCCCEEEEEECCC--CHHHHHHHHHHHHHCC--CCCCCCCCC
Q ss_conf 2338864578658875477368983258883348--9889999999997128--974211001
Q gi|254780799|r 664 TILGEQGAEQLLGQGDMLYMTGGGRVQRIHGPFV--SDIEVEKVVSHLKTQG--EAKYIDIKD 722 (806)
Q Consensus 664 tild~~gae~Llg~gdml~~~~~~~~~r~~g~~v--~~~ev~~v~~~~~~q~--~~~y~~~~~ 722 (806)
++.|-.|.|++--.| ...-.+-.+.++ |=.-..+|+.-+..+. ...|.+...
T Consensus 231 ~~vDLAGsE~~~~~~-------~~~~~~~e~~~IN~SL~~L~~vi~aL~~~~~~~iPyR~SkL 286 (354)
T d1goja_ 231 FLVDLAGSEKVGKTG-------ASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKL 286 (354)
T ss_dssp EEEECCCCSCCTTSS-------SCCCCTTTTGGGTSHHHHHHHHHHHHHHCSCSCCCGGGCHH
T ss_pred EEEECCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
T ss_conf 886115765213258-------86510354444517899999999987548878677644788
No 288
>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}
Probab=39.59 E-value=6.5 Score=15.56 Aligned_cols=22 Identities=18% Similarity=0.057 Sum_probs=18.6
Q ss_pred EEE-EECCCCHHHHHHHHHHHHH
Q ss_conf 588-8334898899999999971
Q gi|254780799|r 690 QRI-HGPFVSDIEVEKVVSHLKT 711 (806)
Q Consensus 690 ~r~-~g~~v~~~ev~~v~~~~~~ 711 (806)
.|| ...|++++||+++++++++
T Consensus 333 ~RIs~~~~~~~edv~~Lv~~l~~ 355 (361)
T d2c0ra1 333 LRASIYNAVPYESCEALVQFMEH 355 (361)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHH
T ss_conf 98870688999999999999999
No 289
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=39.58 E-value=8.4 Score=14.73 Aligned_cols=43 Identities=23% Similarity=0.451 Sum_probs=25.5
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCHH---------HEEEEEECCCHHHHHHCC
Q ss_conf 35530477406799999999999829957---------847888523100111027
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLLYRMTPA---------QCRLIMIDPKMLELSVYD 503 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlLyk~~P~---------evkliliDPK~vEls~Y~ 503 (806)
+++-|..|+|||-.++.++. ..-|+ ..+-+.+|.+.+.+.+++
T Consensus 5 ivliG~~~vGKTsli~r~~~----~~f~~~~~~t~~~~~~~~~~~~~~~~~~~i~D 56 (179)
T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAK----DCFPENYVPTVFENYTASFEIDTQRIELSLWD 56 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHH----SCCCSSCCCCSEEEEEEEEECSSCEEEEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHH----CCCCCCCCCCEEECCCCCCCCCCEEEEECCCC
T ss_conf 99999999598999999972----99998658720101122102564477621333
No 290
>d1tubb1 c.32.1.1 (B:1-245) Tubulin beta-subunit {Pig (Sus scrofa) [TaxId: 9823]}
Probab=39.43 E-value=6.2 Score=15.72 Aligned_cols=81 Identities=22% Similarity=0.343 Sum_probs=48.1
Q ss_pred EEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHCCCCHH-HHCCCCCCHHHHHHHHHHHHH--------H
Q ss_conf 5304774067999999999998299578478885231001110277034-312233430456689999999--------9
Q gi|254780799|r 459 IAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKMLELSVYDGIPN-LLTPVVTNPQKAVTVLKWLVC--------E 529 (806)
Q Consensus 459 IAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~vEls~Y~~iPH-Ll~pVvTd~~kA~~aL~w~V~--------E 529 (806)
+||-||||= -+.|+-.|--.-|+..++- +.=+|| -...||+.|=.++-+|.|... +
T Consensus 139 l~GGTGSGl----Gs~l~e~L~d~yp~~~~~~-----------~~V~P~~~~~~vvvqpYNtvLsl~~L~~~ad~v~~~d 203 (243)
T d1tubb1 139 LGGGTGSGM----GTLLISKIREEYPDRIMNT-----------FSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 203 (243)
T ss_dssp TTCSTTTTT----HHHHHHHHHHHCSSSCEEE-----------CCCCCCTTCSCSSTTHHHHHHHHHHHSSSEEEECCCC
T ss_pred CCCCCCCCH----HHHHHHHHHHHCCCCEEEE-----------EEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEE
T ss_conf 168666646----7999998744256534787-----------7526871338602423187771888986288689945
Q ss_pred HHHHHHHHHH-CCCC--CHHHHHHHHHH
Q ss_conf 9999999987-0899--68999999998
Q gi|254780799|r 530 MEERYQKMSK-IGVR--NIDGFNLKVAQ 554 (806)
Q Consensus 530 Me~RY~l~a~-~~vR--ni~~yN~k~~~ 554 (806)
=|.=|+..++ +++. +.+..|+-+.+
T Consensus 204 N~al~~i~~~~~~~~~~s~~~~N~~Ia~ 231 (243)
T d1tubb1 204 NEALYDICFRTLKLTTPTYGDLNHLVSA 231 (243)
T ss_dssp HHHHHHHTTTTSCCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf 7999999998638999998999999999
No 291
>d1gdva_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Red alga (Porphyra yezoensis) [TaxId: 2788]}
Probab=39.35 E-value=7.6 Score=15.06 Aligned_cols=20 Identities=20% Similarity=0.247 Sum_probs=16.4
Q ss_pred CCCCHHHHHHHHHHHHHCCC
Q ss_conf 34898899999999971289
Q gi|254780799|r 695 PFVSDIEVEKVVSHLKTQGE 714 (806)
Q Consensus 695 ~~v~~~ev~~v~~~~~~q~~ 714 (806)
.-.||+||..|+.|+.+|.+
T Consensus 63 ~~Lsd~ei~~v~~Yi~~~a~ 82 (85)
T d1gdva_ 63 GRLVDEDIEDAANYVLSQSE 82 (85)
T ss_dssp TTSCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHH
T ss_conf 78999999999999999877
No 292
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.29 E-value=8.5 Score=14.70 Aligned_cols=47 Identities=21% Similarity=0.239 Sum_probs=26.8
Q ss_pred EEEEECCCCHHHHHHHHHHHHHH-HHCCHH------HEEEEEECCCHHHHHHCC
Q ss_conf 35530477406799999999999-829957------847888523100111027
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLL-YRMTPA------QCRLIMIDPKMLELSVYD 503 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlL-yk~~P~------evkliliDPK~vEls~Y~ 503 (806)
+++-|..|+|||-.+|.+...-- +...|. -.+-+.+|-|.+.+..++
T Consensus 6 v~lvG~~~vGKTsLi~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~d 59 (172)
T d2g3ya1 6 VVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLD 59 (172)
T ss_dssp EEEECCTTSSHHHHHHHHHCCCCTTCCC---CCTTEEEEEEEETTEEEEEEEEC
T ss_pred EEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCEEEECCCCCEEEEEEEC
T ss_conf 999998992999999999728677566566255310000000488515555621
No 293
>d2frha1 a.4.5.28 (A:102-216) Pleiotropic regulator of virulence genes, SarA {Staphylococcus aureus [TaxId: 1280]}
Probab=39.14 E-value=8.5 Score=14.68 Aligned_cols=57 Identities=9% Similarity=0.151 Sum_probs=40.8
Q ss_pred HHHHHHHCCC--EEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHC-CCCCEEEECHHH
Q ss_conf 9999996598--50001422200117789999999997798680227-887267317125
Q gi|254780799|r 746 AVDIVLRDNK--ASISYIQRRLGIGYNRAASIIENMEEKGVIGPASS-TGKREILISSME 802 (806)
Q Consensus 746 a~~~v~~~~~--~s~s~lqr~~~igy~raar~~~~~e~~giv~~~~g-~~~r~vl~~~~~ 802 (806)
+...+.+.+. .|.+-|-+++.+-=+-..|+++.||++|.|-.... .-.|.+++.-.+
T Consensus 38 vL~~l~~~~~~~~t~~~la~~l~~~~~tvs~~i~~Le~~gli~r~~~~~D~R~~~i~LT~ 97 (115)
T d2frha1 38 VLTYISENKEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNA 97 (115)
T ss_dssp HHHHHHHTCCSEEEHHHHHHHSSSHHHHHHHHHHHHHHTTSSCCBCCSSSSCCCEEECCS
T ss_pred HHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEECH
T ss_conf 999998089999889999999797886899999999846651321013678647989898
No 294
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=39.14 E-value=5.1 Score=16.37 Aligned_cols=47 Identities=28% Similarity=0.454 Sum_probs=28.3
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHC---CHH-H--EEEEEECCCHHHHHHCC
Q ss_conf 35530477406799999999999829---957-8--47888523100111027
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLLYRM---TPA-Q--CRLIMIDPKMLELSVYD 503 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlLyk~---~P~-e--vkliliDPK~vEls~Y~ 503 (806)
+++.|..|+|||--+|.++..-.-.. ++. + .+-+.+|=+.+.|.+|+
T Consensus 9 i~vvG~~~vGKTsLi~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~i~D 61 (173)
T d2fu5c1 9 LLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 61 (173)
T ss_dssp EEEECCCCC----------------CHHHHHCEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEE
T ss_conf 99999999499999999970988875476454127899999999999999998
No 295
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=38.76 E-value=6.4 Score=15.62 Aligned_cols=14 Identities=14% Similarity=0.185 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 65457899999974
Q gi|254780799|r 331 VMQNNACTLKSVLS 344 (806)
Q Consensus 331 eL~~nA~lLE~tL~ 344 (806)
..++..+.++++|+
T Consensus 210 V~~~I~~~I~~Kl~ 223 (225)
T d1ckea_ 210 VIEKALQYARQKLA 223 (225)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999999977
No 296
>d1a56a_ a.3.1.1 (A:) Cytochrome c552 {Nitrosomonas europaea [TaxId: 915]}
Probab=38.26 E-value=6.6 Score=15.50 Aligned_cols=16 Identities=25% Similarity=0.341 Sum_probs=13.5
Q ss_pred CCHHHHHHHHHHHHHC
Q ss_conf 8988999999999712
Q gi|254780799|r 697 VSDIEVEKVVSHLKTQ 712 (806)
Q Consensus 697 v~~~ev~~v~~~~~~q 712 (806)
+||+|+..|++|++++
T Consensus 65 Lsd~ei~~l~~Yl~sl 80 (81)
T d1a56a_ 65 VSDADAKALADWILTL 80 (81)
T ss_dssp SSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHC
T ss_conf 9999999999999974
No 297
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=38.23 E-value=8.8 Score=14.58 Aligned_cols=20 Identities=25% Similarity=0.591 Sum_probs=15.8
Q ss_pred EEEEECCCCHHHHHHHHHHH
Q ss_conf 35530477406799999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~ 476 (806)
+.|.|..||||+--+|.++-
T Consensus 5 ivi~GPSG~GK~tl~~~L~~ 24 (205)
T d1s96a_ 5 YIVSAPSGAGKSSLIQALLK 24 (205)
T ss_dssp EEEECCTTSCHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999999999999999986
No 298
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=38.06 E-value=8.9 Score=14.57 Aligned_cols=49 Identities=27% Similarity=0.391 Sum_probs=28.7
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHH---HHHCCHH---HEEEEEECCCHHHHHHCC
Q ss_conf 023553047740679999999999---9829957---847888523100111027
Q gi|254780799|r 455 PHLLIAGTTGSGKSVAINTMILSL---LYRMTPA---QCRLIMIDPKMLELSVYD 503 (806)
Q Consensus 455 PHLLIAGtTGSGKSV~iN~iI~Sl---Lyk~~P~---evkliliDPK~vEls~Y~ 503 (806)
--++|.|..|+|||-.+|.++..- =|..++. ..+-+.++-..++|.+++
T Consensus 7 ~KivvvG~~~vGKTsli~~l~~~~~~~~~~~t~~~~~~~~~i~~~~~~~~l~i~D 61 (194)
T d2bcgy1 7 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 61 (194)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHCCCCTTCCCSSCCCEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEEEE
T ss_conf 8999999999098999999961988887288543257899999965789999998
No 299
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.92 E-value=5.3 Score=16.24 Aligned_cols=48 Identities=17% Similarity=0.279 Sum_probs=31.2
Q ss_pred EEEEEECCCCHHHHHHHHHHHHH---HHHCCHH---HEEEEEECCCHHHHHHCC
Q ss_conf 23553047740679999999999---9829957---847888523100111027
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSL---LYRMTPA---QCRLIMIDPKMLELSVYD 503 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~Sl---Lyk~~P~---evkliliDPK~vEls~Y~ 503 (806)
-+++-|..|+|||--+|.++..- -|..++. ..+-+-.+.+.+.|.+++
T Consensus 5 Ki~vvG~~~vGKTsLi~~~~~~~f~~~~~~t~~~~~~~~~i~~~~~~~~l~i~d 58 (170)
T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWD 58 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSCCCTTCCCCSSEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 999999999198999999972999865465301012023221111232234555
No 300
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=37.81 E-value=8.9 Score=14.54 Aligned_cols=27 Identities=19% Similarity=0.186 Sum_probs=23.2
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 020235530477406799999999999
Q gi|254780799|r 453 RMPHLLIAGTTGSGKSVAINTMILSLL 479 (806)
Q Consensus 453 kMPHLLIAGtTGSGKSV~iN~iI~SlL 479 (806)
|=+++|+.|-.|+|||-..+++.-.+=
T Consensus 153 ~~~~~~~~g~~~~gk~~~~~~~~~~~~ 179 (362)
T d1svma_ 153 KKRYWLFKGPIDSGKTTLAAALLELCG 179 (362)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 767699989999888999999999859
No 301
>d1ku9a_ a.4.5.36 (A:) DNA-binding protein Mj223 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=37.78 E-value=8.9 Score=14.54 Aligned_cols=29 Identities=28% Similarity=0.405 Sum_probs=9.6
Q ss_pred EEEHHHHHHCCCHHHHHHHHHHHHHCCCC
Q ss_conf 00014222001177899999999977986
Q gi|254780799|r 757 SISYIQRRLGIGYNRAASIIENMEEKGVI 785 (806)
Q Consensus 757 s~s~lqr~~~igy~raar~~~~~e~~giv 785 (806)
+.+-|-.++.+-.+.+.+.++.||+.|.|
T Consensus 43 t~~ela~~l~vsk~~vs~~l~~L~~~GlV 71 (151)
T d1ku9a_ 43 TISDIMEELKISKGNVSMSLKKLEELGFV 71 (151)
T ss_dssp EHHHHHHHHTCCHHHHHHHHHHHHHTTSE
T ss_pred CHHHHHHHHCCCCCHHHHHHHHHHHCCCE
T ss_conf 89999998677702499999999988997
No 302
>d1mz4a_ a.3.1.1 (A:) Cytochrome c550 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=37.65 E-value=8.6 Score=14.67 Aligned_cols=17 Identities=6% Similarity=0.325 Sum_probs=15.0
Q ss_pred CCHHHHHHHHHHHHHCC
Q ss_conf 89889999999997128
Q gi|254780799|r 697 VSDIEVEKVVSHLKTQG 713 (806)
Q Consensus 697 v~~~ev~~v~~~~~~q~ 713 (806)
+||+||..|+.|+.+|.
T Consensus 107 Lsdeei~av~aYi~~~p 123 (131)
T d1mz4a_ 107 LTEKDLVAIAGHILVEP 123 (131)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCC
T ss_conf 99999999999998667
No 303
>d1gksa_ a.3.1.1 (A:) Cytochrome c551 {Ectothiorhodospira halophila [TaxId: 1053]}
Probab=37.61 E-value=9 Score=14.52 Aligned_cols=16 Identities=6% Similarity=0.077 Sum_probs=13.4
Q ss_pred CCCHHHHHHHHHHHHH
Q ss_conf 4898899999999971
Q gi|254780799|r 696 FVSDIEVEKVVSHLKT 711 (806)
Q Consensus 696 ~v~~~ev~~v~~~~~~ 711 (806)
-.||+||..||+|+.+
T Consensus 61 ~LsdeeI~~v~~Yi~~ 76 (78)
T d1gksa_ 61 RADREDLVKAIEYMLS 76 (78)
T ss_dssp TBCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHH
T ss_conf 9999999999999997
No 304
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=37.53 E-value=9 Score=14.51 Aligned_cols=18 Identities=39% Similarity=0.547 Sum_probs=12.3
Q ss_pred EEEEEECCCCHHHHHHHH
Q ss_conf 235530477406799999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINT 473 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~ 473 (806)
-+|+.|.-|+|||-+.-.
T Consensus 16 gvl~~G~sG~GKStlal~ 33 (176)
T d1kkma_ 16 GVLITGDSGVGKSETALE 33 (176)
T ss_dssp EEEEECCTTSCHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHH
T ss_conf 999980899998999999
No 305
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=37.48 E-value=6.6 Score=15.54 Aligned_cols=17 Identities=29% Similarity=0.634 Sum_probs=13.3
Q ss_pred EEEEEECCCCHHHHHHH
Q ss_conf 23553047740679999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAIN 472 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN 472 (806)
+++|-|.-|||||-=-.
T Consensus 2 ~I~i~G~pGSGKsT~a~ 18 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAE 18 (182)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
T ss_conf 89998899999899999
No 306
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=36.75 E-value=6.9 Score=15.40 Aligned_cols=15 Identities=33% Similarity=0.722 Sum_probs=12.3
Q ss_pred EEEEEECCCCHHHHH
Q ss_conf 235530477406799
Q gi|254780799|r 456 HLLIAGTTGSGKSVA 470 (806)
Q Consensus 456 HLLIAGtTGSGKSV~ 470 (806)
...|.|.-|||||-=
T Consensus 2 ~I~i~G~pGsGKsT~ 16 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQ 16 (181)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
T ss_conf 899988999997999
No 307
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.10 E-value=9.5 Score=14.35 Aligned_cols=21 Identities=29% Similarity=0.446 Sum_probs=17.5
Q ss_pred EEEEEECCCCHHHHHHHHHHH
Q ss_conf 235530477406799999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~ 476 (806)
.+++-|..|+|||--+|.++.
T Consensus 6 Ki~lvG~~~vGKTsli~rl~~ 26 (167)
T d1z0ja1 6 KVCLLGDTGVGKSSIMWRFVE 26 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
T ss_conf 899999899499999999973
No 308
>d3bzka1 a.60.2.6 (A:474-563) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]}
Probab=36.05 E-value=9.5 Score=14.35 Aligned_cols=33 Identities=24% Similarity=0.363 Sum_probs=28.9
Q ss_pred CCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCC
Q ss_conf 598500014222001177899999999977986
Q gi|254780799|r 753 DNKASISYIQRRLGIGYNRAASIIENMEEKGVI 785 (806)
Q Consensus 753 ~~~~s~s~lqr~~~igy~raar~~~~~e~~giv 785 (806)
=-+||.+.||+-=.||+..|.+|++.-++.|=.
T Consensus 29 iN~As~~~L~~lpGig~~~A~~Iv~~R~~~G~f 61 (90)
T d3bzka1 29 VNTASAALLARISGLNSTLAQNIVAHRDANGAF 61 (90)
T ss_dssp TTTCCHHHHTTSTTCCHHHHHHHHHHHHHHCSC
T ss_pred HHHCCHHHHHHCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 413989999677898999999999999986997
No 309
>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}
Probab=36.02 E-value=9.5 Score=14.34 Aligned_cols=25 Identities=16% Similarity=0.252 Sum_probs=20.5
Q ss_pred EEEEE-ECCCCHHHHHHHHHHHHHCC
Q ss_conf 25888-33489889999999997128
Q gi|254780799|r 689 VQRIH-GPFVSDIEVEKVVSHLKTQG 713 (806)
Q Consensus 689 ~~r~~-g~~v~~~ev~~v~~~~~~q~ 713 (806)
-.|+= |.|-+.+||+++++.+|+-+
T Consensus 355 ~lRis~~~~nt~edid~ll~~l~e~~ 380 (381)
T d1elua_ 355 CIRACCHYITDEEEINHLLARLADFG 380 (381)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHTTCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 79995578899999999999999669
No 310
>d2fbka1 a.4.5.28 (A:8-179) Transcriptional regulator DR1159 {Deinococcus radiodurans [TaxId: 1299]}
Probab=35.75 E-value=2.8 Score=18.33 Aligned_cols=44 Identities=18% Similarity=0.170 Sum_probs=26.5
Q ss_pred EEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHC-CCCCEEEEC
Q ss_conf 50001422200117789999999997798680227-887267317
Q gi|254780799|r 756 ASISYIQRRLGIGYNRAASIIENMEEKGVIGPASS-TGKREILIS 799 (806)
Q Consensus 756 ~s~s~lqr~~~igy~raar~~~~~e~~giv~~~~g-~~~r~vl~~ 799 (806)
.|.|-|-+++.+--....|+++.||++|+|--... ...|.+++.
T Consensus 80 lt~~eLa~~l~i~~~tvsr~l~~Le~~GlV~r~~~~~DrR~~~i~ 124 (172)
T d2fbka1 80 LRPTELSALAAISGPSTSNRIVRLLEKGLIERREDERDRRSASIR 124 (172)
T ss_dssp BCHHHHHHHCSCCSGGGSSHHHHHHHHTSEECCC-------CCBE
T ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHH
T ss_conf 689999999786785799999999868984441355310467750
No 311
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=35.66 E-value=9.6 Score=14.30 Aligned_cols=93 Identities=19% Similarity=0.274 Sum_probs=49.5
Q ss_pred HHHCCCCCHHHCCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHCCCCH
Q ss_conf 43022100021045666666785410020235530477406799999999999829957847888523100111027703
Q gi|254780799|r 427 FEKNQCDLAINLGKSIEGKPIIADLARMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKMLELSVYDGIP 506 (806)
Q Consensus 427 f~~s~~~L~iaLGKdI~G~pvv~DLakMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~vEls~Y~~iP 506 (806)
.++..|||- ..+++.--+.+ ++.+ .=++|-|.-.||||+.+-++-+..++-..- ..|-=+.-++++|+.|
T Consensus 12 i~~~rHPll-e~~~~~VpNdi--~~~~-~~~iiTGpN~~GKSt~lk~i~l~~ilAq~G-----~~vpA~~~~i~~~d~I- 81 (224)
T d1ewqa2 12 IRAGRHPVV-ERRTEFVPNDL--EMAH-ELVLITGPNMAGKSTFLRQTALIALLAQVG-----SFVPAEEAHLPLFDGI- 81 (224)
T ss_dssp EEEECCTTG-GGTSCCCCEEE--EESS-CEEEEESCSSSSHHHHHHHHHHHHHHHTTT-----CCBSSSEEEECCCSEE-
T ss_pred EEECCCCEE-CCCCCEECCEE--EECC-CEEEEECCCCCCCCHHHHHHHHHHHHHHCC-----CEEECCCEEEEECCEE-
T ss_conf 985718879-48997545558--8478-679997887345323455658999998525-----0461375199401169-
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 43122334304566899999999999
Q gi|254780799|r 507 NLLTPVVTNPQKAVTVLKWLVCEMEE 532 (806)
Q Consensus 507 HLl~pVvTd~~kA~~aL~w~V~EMe~ 532 (806)
++- +-+.......+---..||.+
T Consensus 82 --~~~-~~~~d~~~~~~StF~~el~~ 104 (224)
T d1ewqa2 82 --YTR-IGASDDLAGGKSTFMVEMEE 104 (224)
T ss_dssp --EEE-CCC------CCSHHHHHHHH
T ss_pred --EEE-ECCCCCCCCCCCHHHHHHHH
T ss_conf --999-87776023783078986788
No 312
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=35.64 E-value=8 Score=14.91 Aligned_cols=15 Identities=33% Similarity=0.625 Sum_probs=12.6
Q ss_pred EEEEEECCCCHHHHH
Q ss_conf 235530477406799
Q gi|254780799|r 456 HLLIAGTTGSGKSVA 470 (806)
Q Consensus 456 HLLIAGtTGSGKSV~ 470 (806)
=.+|-|.-|||||--
T Consensus 8 iI~i~G~pGSGKsT~ 22 (194)
T d1qf9a_ 8 VVFVLGGPGSGKGTQ 22 (194)
T ss_dssp EEEEEESTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
T ss_conf 899989999988999
No 313
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=35.57 E-value=9.6 Score=14.29 Aligned_cols=18 Identities=22% Similarity=0.484 Sum_probs=13.8
Q ss_pred EEEEEECCCCHHHHHHHH
Q ss_conf 235530477406799999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINT 473 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~ 473 (806)
=+++.|..|||||---+.
T Consensus 5 iI~l~G~~GsGKsTva~~ 22 (178)
T d1qhxa_ 5 MIILNGGSSAGKSGIVRC 22 (178)
T ss_dssp EEEEECCTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
T ss_conf 999989999998999999
No 314
>d1p6ra_ a.4.5.39 (A:) Penicillinase repressor BlaI {Bacillus licheniformis [TaxId: 1402]}
Probab=35.14 E-value=9.8 Score=14.24 Aligned_cols=51 Identities=6% Similarity=0.143 Sum_probs=39.3
Q ss_pred HHHHHHHHHCCCEEEEHHHHHH----CCCHHHHHHHHHHHHHCCCCCHHHCCCCC
Q ss_conf 9999999965985000142220----01177899999999977986802278872
Q gi|254780799|r 744 KQAVDIVLRDNKASISYIQRRL----GIGYNRAASIIENMEEKGVIGPASSTGKR 794 (806)
Q Consensus 744 ~~a~~~v~~~~~~s~s~lqr~~----~igy~raar~~~~~e~~giv~~~~g~~~r 794 (806)
.+..+++.+.+.+++.-++-.| ...|+--..++..|+++|+|.-....++.
T Consensus 12 ~~IM~~lW~~~~~t~~ei~~~l~~~~~~~~tTv~T~L~rL~~KG~l~~~k~gr~~ 66 (82)
T d1p6ra_ 12 LEVMKVIWKHSSINTNEVIKELSKTSTWSPKTIQTMLLRLIKKGALNHHKEGRVF 66 (82)
T ss_dssp HHHHHHHHTSSSEEHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSEEEEEETTEE
T ss_pred HHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCEE
T ss_conf 9999999957997899999985023697284799999999988986787059858
No 315
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=34.95 E-value=9.8 Score=14.22 Aligned_cols=19 Identities=26% Similarity=0.321 Sum_probs=16.2
Q ss_pred EEEEECCCCHHHHHHHHHH
Q ss_conf 3553047740679999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI 475 (806)
.=|.|-+.+|||--+|++.
T Consensus 8 IaiiG~~naGKSTL~n~L~ 26 (179)
T d1wb1a4 8 LGIFGHIDHGKTTLSKVLT 26 (179)
T ss_dssp EEEEECTTSSHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHH
T ss_conf 9999077870999999999
No 316
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.42 E-value=10 Score=14.16 Aligned_cols=47 Identities=28% Similarity=0.252 Sum_probs=28.0
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCH---HH-EEEEEECCCHHHHHHCC
Q ss_conf 3553047740679999999999982995---78-47888523100111027
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLLYRMTP---AQ-CRLIMIDPKMLELSVYD 503 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlLyk~~P---~e-vkliliDPK~vEls~Y~ 503 (806)
+++-|..|+|||--+|.+.-.---...| +. .+-+.+|-+.+.|.+++
T Consensus 4 i~lvG~~~vGKTsLi~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~i~D 54 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGGVEDGPEAEAAGHTYDRSIVVDGEEASLMVYD 54 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHTC---------CEEEEEEEEETTEEEEEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCEEECCCCCCCEEEEE
T ss_conf 999898993999999998188567758815665300100123332103420
No 317
>d1c53a_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Desulfovibrio vulgaris, different strains [TaxId: 881]}
Probab=34.32 E-value=8.8 Score=14.57 Aligned_cols=19 Identities=16% Similarity=0.057 Sum_probs=14.2
Q ss_pred EECCCCHHHHHHHHHHHHH
Q ss_conf 8334898899999999971
Q gi|254780799|r 693 HGPFVSDIEVEKVVSHLKT 711 (806)
Q Consensus 693 ~g~~v~~~ev~~v~~~~~~ 711 (806)
++...||+||..|++|+++
T Consensus 60 ~~~~Lsd~ei~~l~aYi~s 78 (79)
T d1c53a_ 60 LVKRYSDEEMKAMADYMSK 78 (79)
T ss_pred HHHCCCHHHHHHHHHHHHH
T ss_conf 7704999999999999975
No 318
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.25 E-value=10 Score=14.14 Aligned_cols=20 Identities=35% Similarity=0.473 Sum_probs=17.0
Q ss_pred EEEEECCCCHHHHHHHHHHH
Q ss_conf 35530477406799999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~ 476 (806)
++|-|..|+|||--||.++.
T Consensus 6 ivvvG~~~vGKTsli~r~~~ 25 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTD 25 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHC
T ss_conf 99999999399999999962
No 319
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.12 E-value=10 Score=14.13 Aligned_cols=45 Identities=27% Similarity=0.506 Sum_probs=28.4
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCCHH---------HEEEEEECCCHHHHHHCC
Q ss_conf 235530477406799999999999829957---------847888523100111027
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYRMTPA---------QCRLIMIDPKMLELSVYD 503 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk~~P~---------evkliliDPK~vEls~Y~ 503 (806)
.+++-|.-|+|||-.||.+... ++.++ ..+.+-++-+...+.+++
T Consensus 9 Ki~vvG~~~vGKTsli~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~D 62 (177)
T d1x3sa1 9 KILIIGESGVGKSSLLLRFTDD---TFDPELAATIGVDFKVKTISVDGNKAKLAIWD 62 (177)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS---CCCTTCCCCCSEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHC---CCCCCCCCCEEECCEEEEEEEECCCCEEEEEE
T ss_conf 8999998990889999999719---98875044221000367999951234899998
No 320
>d2nlya1 c.6.2.7 (A:31-254) Hypothetical protein BH1492 {Bacillus halodurans [TaxId: 86665]}
Probab=33.83 E-value=6.5 Score=15.59 Aligned_cols=174 Identities=13% Similarity=0.123 Sum_probs=80.5
Q ss_pred CCEEEEEHHHHHHHHHHCCCHH--------------HHHHHHHHHHHHHCCEEEEEE----ECC-CCCCCCCHHHHHCCC
Q ss_conf 9868776344688887321005--------------889999998664142379999----657-775355435541102
Q gi|254780799|r 589 MPYIVVVIDEMADLMMVARKDI--------------ESAVQRLAQMARASGIHVIMA----TQR-PSVDVITGTIKANFP 649 (806)
Q Consensus 589 lp~ivviiDElaDlmm~~~~~v--------------e~~i~rlaq~ara~GiHli~a----Tqr-Psvdvitg~ikan~p 649 (806)
||.|.||||-+..=+ ...+++ ......+|++||++|-..+|- .+. |..|-=
T Consensus 1 ~~riAIVIdD~G~~~-~~~~~~~~Lp~pvT~Ai~P~~~~~~~~a~~A~~~g~EvllhlPMep~~~~~~~~g--------- 70 (224)
T d2nlya1 1 MKRAAIIIDDFGGDV-KGVDDFLTGEIPVTVAVMPFLEHSTKQAEIAQAAGLEVIVHMPLEPKKGKISWLG--------- 70 (224)
T ss_dssp CEEEEEEEEEESSCC-TTHHHHHTCSSCEEEEECSSSTTHHHHHHHHHHTTCEEEEEEEECCC-----------------
T ss_pred CCEEEEEEECCCCCH-HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC---------
T ss_conf 971999996799986-8999997589875899879998619999999987986999745575667767888---------
Q ss_pred CEEEEEECCCCCCHHHCCCCCHHHHCCCC--CEEEECCCCCEEE-EEECCCCHHHH-HHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 51587645866421233886457865887--5477368983258-88334898899-99999997128974211001245
Q gi|254780799|r 650 TRISFQVSSKIDSRTILGEQGAEQLLGQG--DMLYMTGGGRVQR-IHGPFVSDIEV-EKVVSHLKTQGEAKYIDIKDKIL 725 (806)
Q Consensus 650 ~riaf~v~s~~dSrtild~~gae~Llg~g--dml~~~~~~~~~r-~~g~~v~~~ev-~~v~~~~~~q~~~~y~~~~~~~~ 725 (806)
..+++....++...-+= .+--.|......- .-+.|-+|++. +.|.+.+|.+| --|+|..+...
T Consensus 71 ------------p~~L~~~~~~~ei~~~l~~~l~~vP~avGvnNhmGS~~T~~~~~m~~v~~~l~~~g-l~fvDS~T~~~ 137 (224)
T d2nlya1 71 ------------PSGITSNLSVGEVKSRVRKAFDDIPYAVGLNNHMGSKIVENEKIMRAILEVVKEKN-AFIIDSGTSPH 137 (224)
T ss_dssp ------------CCCBCTTCCHHHHHHHHHHHHHHSTTCCEEEEEECTTGGGCHHHHHHHHHHHHHTT-CEEEECCCCSS
T ss_pred ------------CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCHHHHHHHHHHHHHCC-CEEEECCCCCC
T ss_conf ------------77677789999999999999984736479713766411179899999999997769-78993277746
Q ss_pred CCC-------CC---CCCC-CCCCC------CHHHHHHHHHHHHCCCEE-EEHHHHHHCCCHHHHHHHHHHHHHCCCC
Q ss_conf 566-------67---7888-88777------703899999999659850-0014222001177899999999977986
Q gi|254780799|r 726 LNE-------EM---RFSE-NSSVA------DDLYKQAVDIVLRDNKAS-ISYIQRRLGIGYNRAASIIENMEEKGVI 785 (806)
Q Consensus 726 ~~~-------~~---~~~~-~~~~~------d~l~~~a~~~v~~~~~~s-~s~lqr~~~igy~raar~~~~~e~~giv 785 (806)
+-. +- .-+- -+++. +.-++++++...+.|.|= +--+++-...-+..-.+++.+++.+||.
T Consensus 138 sva~~~A~~~gvp~~~rdvfLD~~~~~~~~I~~~l~~~~~~A~~~G~AI~IGH~~~p~p~Tl~~L~~~l~~l~~~gi~ 215 (224)
T d2nlya1 138 SLIPQLAEELEVPYATRSIFLDNTHSSRKEVIKNMRKLAKKAKQGSEPIGIGHVGVRGDETYAGIRSMLDEFQAESIQ 215 (224)
T ss_dssp CSHHHHHHHTTCCEEECCEESCCTTCCHHHHHHHHHHHHHHHHTTSCCEEEEECSTTHHHHHHHHGGGHHHHHHTTEE
T ss_pred CHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEE
T ss_conf 689999987599858887865799971999999999999998736967999837999768999999973577658879
No 321
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.43 E-value=8.4 Score=14.75 Aligned_cols=19 Identities=21% Similarity=0.585 Sum_probs=13.9
Q ss_pred EEEEEECCCCHHHHHHHHH
Q ss_conf 2355304774067999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTM 474 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~i 474 (806)
++++-|.-|||||.--.-+
T Consensus 4 rIvl~G~pGSGKtT~a~~L 22 (180)
T d1akya1 4 RMVLIGPPGAGKGTQAPNL 22 (180)
T ss_dssp EEEEECCTTSSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
T ss_conf 9999899999989999999
No 322
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=33.42 E-value=10 Score=14.05 Aligned_cols=47 Identities=19% Similarity=0.211 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCH
Q ss_conf 03899999999659850001422200117789999999997798680
Q gi|254780799|r 741 DLYKQAVDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGP 787 (806)
Q Consensus 741 ~l~~~a~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~ 787 (806)
+.=.+||+++.+.+-.|.+-+-++|.|+++--.+++.+....|-...
T Consensus 9 EfK~~aV~l~~~~~g~s~~~vA~~lGIs~~tl~~W~k~~~~~~~~~~ 55 (89)
T d2jn6a1 9 EFKRDAVALYENSDGASLQQIANDLGINRVTLKNWIIKYGSNHNVQG 55 (89)
T ss_dssp HHHHHHHHHHTTGGGSCHHHHHHHHTSCHHHHHHHHHHHCCCSTTCS
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999829985999999979898899999999844245667
No 323
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.33 E-value=10 Score=14.04 Aligned_cols=21 Identities=29% Similarity=0.510 Sum_probs=16.8
Q ss_pred EEEEEECCCCHHHHHHHHHHH
Q ss_conf 235530477406799999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~ 476 (806)
.+++-|..|+|||-.+|.++.
T Consensus 5 KivvvG~~~vGKTsli~r~~~ 25 (167)
T d1c1ya_ 5 KLVVLGSGGVGKSALTVQFVQ 25 (167)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 999999899899999999970
No 324
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=33.30 E-value=10 Score=14.04 Aligned_cols=48 Identities=21% Similarity=0.398 Sum_probs=27.8
Q ss_pred CCCCCCEEEEECC----CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEE
Q ss_conf 5666666785410----020235530477406799999999999829957847888
Q gi|254780799|r 440 KSIEGKPIIADLA----RMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIM 491 (806)
Q Consensus 440 KdI~G~pvv~DLa----kMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evklil 491 (806)
|...+..++-|+. +==-+-+.|--|||||.-+|.| +-+ ..|++=+..+
T Consensus 10 k~yg~~~vl~~vs~~v~~Gei~glvG~nGaGKSTLl~~l-~G~---~~p~~G~i~i 61 (238)
T d1vpla_ 10 KRIGKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRII-STL---IKPSSGIVTV 61 (238)
T ss_dssp EEETTEEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHH-TTS---SCCSEEEEEE
T ss_pred EEECCEEEECCCEEEECCCCEEEEECCCCCCHHHHHHHH-HCC---CCCCCCEEEE
T ss_conf 999999998062568848979999999999999999999-669---8878887999
No 325
>d3deua1 a.4.5.28 (A:2-141) Transcriptional regulator SlyA {Salmonella typhimurium [TaxId: 90371]}
Probab=33.18 E-value=10 Score=14.02 Aligned_cols=56 Identities=16% Similarity=0.258 Sum_probs=36.6
Q ss_pred HHHHHHHHCCC-EEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHH-HCCCCCEEEECH
Q ss_conf 99999996598-500014222001177899999999977986802-278872673171
Q gi|254780799|r 745 QAVDIVLRDNK-ASISYIQRRLGIGYNRAASIIENMEEKGVIGPA-SSTGKREILISS 800 (806)
Q Consensus 745 ~a~~~v~~~~~-~s~s~lqr~~~igy~raar~~~~~e~~giv~~~-~g~~~r~vl~~~ 800 (806)
.++..+.+.+. .+.+-|.+++.+-=....|+++.||++|.|--. +..-.|.+++.-
T Consensus 35 ~~L~~l~~~~~~~t~~~la~~l~i~~~~vs~~l~~L~~~glI~~~~~~~D~R~~~l~l 92 (140)
T d3deua1 35 VTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQTCASDRRAKRIKL 92 (140)
T ss_dssp HHHHHHHHSCSSEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEC--------CEEEE
T ss_pred HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEE
T ss_conf 9999998749995699999997877767889999997089777516678988105688
No 326
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=33.09 E-value=7.9 Score=14.95 Aligned_cols=13 Identities=38% Similarity=0.859 Sum_probs=9.2
Q ss_pred EEEEECCCCHHHH
Q ss_conf 3553047740679
Q gi|254780799|r 457 LLIAGTTGSGKSV 469 (806)
Q Consensus 457 LLIAGtTGSGKSV 469 (806)
+.+-|..|||||-
T Consensus 5 I~l~G~~GsGKST 17 (169)
T d1kaga_ 5 IFLVGPMGAGKST 17 (169)
T ss_dssp EEEECCTTSCHHH
T ss_pred EEEECCCCCCHHH
T ss_conf 9998999999999
No 327
>d1wvec1 a.3.1.1 (C:602-675) p-Cresol methylhydroxylase, cytochrome c subunit {Pseudomonas putida [TaxId: 303]}
Probab=32.84 E-value=11 Score=13.98 Aligned_cols=17 Identities=24% Similarity=0.391 Sum_probs=14.9
Q ss_pred CCCHHHHHHHHHHHHHC
Q ss_conf 48988999999999712
Q gi|254780799|r 696 FVSDIEVEKVVSHLKTQ 712 (806)
Q Consensus 696 ~v~~~ev~~v~~~~~~q 712 (806)
.+||+|+..|++|+++-
T Consensus 56 ~lsd~ei~~l~~Yi~sl 72 (74)
T d1wvec1 56 YVDDESLTQVAEYLSSL 72 (74)
T ss_dssp TSCHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHC
T ss_conf 69999999999999867
No 328
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=31.94 E-value=8.4 Score=14.75 Aligned_cols=18 Identities=39% Similarity=0.610 Sum_probs=12.4
Q ss_pred CEEEEEECCCCHHHHHHH
Q ss_conf 023553047740679999
Q gi|254780799|r 455 PHLLIAGTTGSGKSVAIN 472 (806)
Q Consensus 455 PHLLIAGtTGSGKSV~iN 472 (806)
|-+.+-|.-|||||--=.
T Consensus 2 p~IvliG~~G~GKSTig~ 19 (165)
T d2iyva1 2 PKAVLVGLPGSGKSTIGR 19 (165)
T ss_dssp CSEEEECSTTSSHHHHHH
T ss_pred CCEEEECCCCCCHHHHHH
T ss_conf 948998899998899999
No 329
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=31.80 E-value=8.6 Score=14.67 Aligned_cols=17 Identities=24% Similarity=0.483 Sum_probs=9.9
Q ss_pred EEEECCCCHHHHHHHHH
Q ss_conf 55304774067999999
Q gi|254780799|r 458 LIAGTTGSGKSVAINTM 474 (806)
Q Consensus 458 LIAGtTGSGKSV~iN~i 474 (806)
++-|.-|||||--=..+
T Consensus 10 ~l~G~~GsGKTTia~~L 26 (183)
T d1m8pa3 10 FLTGYMNSGKDAIARAL 26 (183)
T ss_dssp EEECSTTSSHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHH
T ss_conf 98899999999999999
No 330
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=31.61 E-value=11 Score=13.84 Aligned_cols=22 Identities=9% Similarity=0.191 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHCCEEEEEEE
Q ss_conf 8899999986641423799996
Q gi|254780799|r 611 ESAVQRLAQMARASGIHVIMAT 632 (806)
Q Consensus 611 e~~i~rlaq~ara~GiHli~aT 632 (806)
-.++.-|-.+-+.+..|-|-+=
T Consensus 602 r~sL~~L~~~L~~t~~hFIRCI 623 (789)
T d1kk8a2 602 RESLNKLMKNLYSTHPHFVRCI 623 (789)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEEC
T ss_conf 9999999998754797699942
No 331
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.57 E-value=11 Score=13.84 Aligned_cols=28 Identities=29% Similarity=0.468 Sum_probs=20.1
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEE
Q ss_conf 355304774067999999999998299578478
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLLYRMTPAQCRL 489 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkl 489 (806)
+.+-|.+||||+.-++. |.+..|+..++
T Consensus 6 ivl~Gpsg~GK~tl~~~-----L~~~~~~~~~~ 33 (178)
T d1kgda_ 6 LVLLGAHGVGRRHIKNT-----LITKHPDRFAY 33 (178)
T ss_dssp EEEECCTTSSHHHHHHH-----HHHHCTTTEEC
T ss_pred EEEECCCCCCHHHHHHH-----HHHHCCCCEEE
T ss_conf 99999899999999999-----99709767652
No 332
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=31.54 E-value=11 Score=13.84 Aligned_cols=24 Identities=42% Similarity=0.578 Sum_probs=16.3
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 2355304774067999999999998299
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYRMT 483 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk~~ 483 (806)
-+|+.|.-|+|||-+- +.|+-+-.
T Consensus 17 gvli~G~sg~GKS~la----~~l~~~g~ 40 (169)
T d1ko7a2 17 GVLITGDSGIGKSETA----LELIKRGH 40 (169)
T ss_dssp EEEEEESTTSSHHHHH----HHHHHTTC
T ss_pred EEEEEECCCCCHHHHH----HHHHHCCC
T ss_conf 9999808999999999----99998499
No 333
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.46 E-value=11 Score=13.83 Aligned_cols=20 Identities=15% Similarity=0.210 Sum_probs=17.2
Q ss_pred EEEEECCCCHHHHHHHHHHH
Q ss_conf 35530477406799999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~ 476 (806)
+++-|..|+|||--+|.++.
T Consensus 6 ivlvG~~~vGKTsLi~r~~~ 25 (167)
T d1z08a1 6 VVLLGEGCVGKTSLVLRYCE 25 (167)
T ss_dssp EEEECCTTSCHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99999999398999999982
No 334
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=31.33 E-value=10 Score=14.11 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=22.3
Q ss_pred EEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCC
Q ss_conf 77634468888732100588999999866414237999965777
Q gi|254780799|r 593 VVVIDEMADLMMVARKDIESAVQRLAQMARASGIHVIMATQRPS 636 (806)
Q Consensus 593 vviiDElaDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPs 636 (806)
+++|||.- .=+ -+......+-.|.++++ .+-.|++|.+|.
T Consensus 244 ~~~iDEpe-~~L-hp~~~~~l~~~l~~~~~--~~QviitTHsp~ 283 (308)
T d1e69a_ 244 FYVLDEVD-SPL-DDYNAERFKRLLKENSK--HTQFIVITHNKI 283 (308)
T ss_dssp EEEEESCC-SSC-CHHHHHHHHHHHHHHTT--TSEEEEECCCTT
T ss_pred HHHHHHCC-CCC-CHHHHHHHHHHHHHHCC--CCEEEEEECCHH
T ss_conf 45543203-357-97899999999998554--887999989889
No 335
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=31.31 E-value=5.4 Score=16.18 Aligned_cols=37 Identities=14% Similarity=0.199 Sum_probs=23.5
Q ss_pred CCE--EEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEE
Q ss_conf 202--3553047740679999999999982995784788
Q gi|254780799|r 454 MPH--LLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLI 490 (806)
Q Consensus 454 MPH--LLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkli 490 (806)
=|| +-|.|-..+|||-.+|+|.-.+..+..-+.-|..
T Consensus 6 ~p~ini~iiGhVd~GKSTL~~~L~~~~~~~~~~~~~~~~ 44 (205)
T d2qn6a3 6 QPEVNIGVVGHVDHGKTTLVQAITGIWTSKHSEELKRGM 44 (205)
T ss_dssp CCCEEEEEECSTTSSHHHHHHHHHSCCC-----------
T ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHC
T ss_conf 997089999724886999999997041212288987602
No 336
>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=31.00 E-value=11 Score=13.77 Aligned_cols=104 Identities=16% Similarity=0.131 Sum_probs=44.3
Q ss_pred CEEEEEEEECCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCEEEEEECCCC-----CCEEEEHHHC
Q ss_conf 32899841044244444321478639999978899998863001210-00388612555302456-----6238734230
Q gi|254780799|r 349 QGEIVNVRPGPVITLYELEPAPGIKSSRIIGLSDDIARSMSAISARV-AVIPRRNAIGIELPNDI-----RETVMLRDLI 422 (806)
Q Consensus 349 e~~Vv~v~pGPVVTrYEi~PApGVKvSKI~nLadDIA~aLsa~svRI-apIPGK~~VGIEiPN~~-----r~~V~lreil 422 (806)
.+.|+++.-.-...-+.-.++=++==.-+.+|.+-+|+-++-..||| +.-||- |+-|-.+ .....|+.+.
T Consensus 131 ~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~----i~T~~~~~~~~~~~~~pl~R~~ 206 (244)
T d1nffa_ 131 RGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGL----VKTPMTDWVPEDIFQTALGRAA 206 (244)
T ss_dssp CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC----BCSGGGTTSCTTCSCCSSSSCB
T ss_pred CCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC----CCCHHHHHHHHHHHHCCCCCCC
T ss_conf 534885055443334433342355778999999999999553087999984087----4682576606888741015887
Q ss_pred CCHHHHHCCCCCHHHCCCCCCCCEEEEE---CCCCCE
Q ss_conf 7213430221000210456666667854---100202
Q gi|254780799|r 423 VSRVFEKNQCDLAINLGKSIEGKPIIAD---LARMPH 456 (806)
Q Consensus 423 ~s~~f~~s~~~L~iaLGKdI~G~pvv~D---LakMPH 456 (806)
+-++..+.=.-|.-.-..-|+|+.+.+| ++.|+|
T Consensus 207 ~p~diA~~v~fL~s~~s~~itG~~i~vDGG~~ag~~~ 243 (244)
T d1nffa_ 207 EPVEVSNLVVYLASDESSYSTGAEFVVDGGTVAGLAH 243 (244)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCC
T ss_pred CHHHHHHHHHHHHCHHHCCCCCCEEEECCCEECCCCC
T ss_conf 9999999999995735379768789979780125167
No 337
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.93 E-value=11 Score=13.76 Aligned_cols=29 Identities=24% Similarity=0.573 Sum_probs=19.8
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEE
Q ss_conf 3553047740679999999999982995784788
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLI 490 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkli 490 (806)
+.|-|.+||||+--++.+ .+..|+...+.
T Consensus 4 Ivl~GpsG~GK~tl~~~L-----~~~~~~~~~~~ 32 (186)
T d1gkya_ 4 IVISGPSGTGKSTLLKKL-----FAEYPDSFGFS 32 (186)
T ss_dssp EEEECCTTSSHHHHHHHH-----HHHCTTTEEEC
T ss_pred EEEECCCCCCHHHHHHHH-----HHHCCCCEEEE
T ss_conf 999899999989999999-----97488662477
No 338
>d1yaca_ c.33.1.3 (A:) YcaC {Escherichia coli [TaxId: 562]}
Probab=30.81 E-value=11 Score=13.75 Aligned_cols=149 Identities=14% Similarity=0.164 Sum_probs=76.1
Q ss_pred EEEEEHHHHHHHHHHC----CCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCEEEEEECCCCCCHHHC
Q ss_conf 6877634468888732----100588999999866414237999965777535543554110251587645866421233
Q gi|254780799|r 591 YIVVVIDEMADLMMVA----RKDIESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKANFPTRISFQVSSKIDSRTIL 666 (806)
Q Consensus 591 ~ivviiDElaDlmm~~----~~~ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ikan~p~riaf~v~s~~dSrtil 666 (806)
--++|||==.|++-.. +.++-..|.+|+..||..|++.|..+|-|.-. -
T Consensus 12 tALlvID~Q~~f~~~~~~~~~~~~~~ni~~L~~~ar~~~~pvi~t~~~~~~~---------------------------~ 64 (204)
T d1yaca_ 12 AAVLLVDHQAGLLSLVRDIEPDKFKNNVLALGDLAKYFNLPTILTTSAETGP---------------------------N 64 (204)
T ss_dssp EEEEEECCBTTGGGGCCSSCHHHHHHHHHHHHHHHHHTTCCEEEEEESTTTT---------------------------T
T ss_pred EEEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC---------------------------C
T ss_conf 7999993822031714333899999999999999996699848999625787---------------------------7
Q ss_pred CCCCHH--HHCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCC-CCCCCCCCC---------CCC----C
Q ss_conf 886457--865887547736898325888334898899999999971289742-110012455---------666----7
Q gi|254780799|r 667 GEQGAE--QLLGQGDMLYMTGGGRVQRIHGPFVSDIEVEKVVSHLKTQGEAKY-IDIKDKILL---------NEE----M 730 (806)
Q Consensus 667 d~~gae--~Llg~gdml~~~~~~~~~r~~g~~v~~~ev~~v~~~~~~q~~~~y-~~~~~~~~~---------~~~----~ 730 (806)
+....| .++..+|..+-.+ -.++|.+.+ +.++++++|-..- +-.+....- +.+ -
T Consensus 65 ~~~~~~~~~~~~~~~~v~~K~------~~saf~~t~----L~~~L~~~gi~~lil~G~~T~~CV~~Ta~dA~~~Gy~V~v 134 (204)
T d1yaca_ 65 GPLVPELKAQFPDAPYIARPG------NINAWDNED----FVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFV 134 (204)
T ss_dssp CCBCHHHHHHCTTSCEEEESS------CSSGGGSHH----HHHHHHHTTCSEEEEEEBSCCCCCHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCCCCCCCCCEEEECC------CCCCCCCHH----HHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCCEEEE
T ss_conf 753211200168887477458------466664336----8999985699779999740450898889999986997999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCEEEEH------HHHHHCCCHHHHHHHH
Q ss_conf 788888777703899999999659850001------4222001177899999
Q gi|254780799|r 731 RFSENSSVADDLYKQAVDIVLRDNKASISY------IQRRLGIGYNRAASII 776 (806)
Q Consensus 731 ~~~~~~~~~d~l~~~a~~~v~~~~~~s~s~------lqr~~~igy~raar~~ 776 (806)
..+.-++-.++..+.|++-..+.+-.=++. |||--+=.|--.++|+
T Consensus 135 v~Da~as~~~~~he~Al~~m~~~g~~i~t~e~v~~el~rd~~~~~~~~~~l~ 186 (204)
T d1yaca_ 135 VTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACELHRDWRNDIAGLATLF 186 (204)
T ss_dssp ETTSCBCSSHHHHHHHHHHHHHHTCEEECHHHHHHHHHCCGGGCHHHHHHHH
T ss_pred ECCCCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 5726287875899999999998799996399999999852142367899999
No 339
>d1nf9a_ c.33.1.3 (A:) Phenazine biosynthesis protein PhzD {Pseudomonas aeruginosa [TaxId: 287]}
Probab=30.71 E-value=11 Score=13.74 Aligned_cols=51 Identities=14% Similarity=0.174 Sum_probs=35.5
Q ss_pred CCCEEEEEHHHHHHHHHHCC----CHHHHHHHHHHHHHHHCCEEEEEEECCCCCC
Q ss_conf 69868776344688887321----0058899999986641423799996577753
Q gi|254780799|r 588 HMPYIVVVIDEMADLMMVAR----KDIESAVQRLAQMARASGIHVIMATQRPSVD 638 (806)
Q Consensus 588 ~lp~ivviiDElaDlmm~~~----~~ve~~i~rlaq~ara~GiHli~aTqrPsvd 638 (806)
+----++|||==-|++=-.+ .++-..|.||.+.||+.|++.|-..+..+.+
T Consensus 29 p~~tALlvVD~Qn~f~~~~~~~~~~~~~~~i~~li~~ar~~g~~Vi~~~~~~~~~ 83 (207)
T d1nf9a_ 29 PRRAVLLVHDMQRYFLRPLPESLRAGLVANAARLRRWCVEQGVQIAYTAQPGSMT 83 (207)
T ss_dssp GGGEEEEEESCBHHHHTTSCHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCSSCC
T ss_pred CCCEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf 7877999987915663865544489999999999999998699089972477887
No 340
>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}
Probab=30.26 E-value=12 Score=13.68 Aligned_cols=79 Identities=16% Similarity=0.249 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCEEEEEECCCCCCHHHCCCCCHHHHCCCCCEEEECCCCC
Q ss_conf 05889999998664142379999657775355435541102515876458664212338864578658875477368983
Q gi|254780799|r 609 DIESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKANFPTRISFQVSSKIDSRTILGEQGAEQLLGQGDMLYMTGGGR 688 (806)
Q Consensus 609 ~ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ikan~p~riaf~v~s~~dSrtild~~gae~Llg~gdml~~~~~~~ 688 (806)
+....+.||. . |+|+++||=||-..+.. +++.-.+ ++-.++-++|| ..|.+.+.
T Consensus 23 ~~~~al~~l~----~-~~~~~i~TGR~~~~~~~-~~~~~~~-----------~~~~~I~~nGa--------~i~~~~~~- 76 (267)
T d1nf2a_ 23 KDRRNIEKLS----R-KCYVVFASGRMLVSTLN-VEKKYFK-----------RTFPTIAYNGA--------IVYLPEEG- 76 (267)
T ss_dssp HHHHHHHHHT----T-TSEEEEECSSCHHHHHH-HHHHHSS-----------SCCCEEEGGGT--------EEEETTTE-
T ss_pred HHHHHHHHHH----C-CCEEEEECCCCHHHHHH-HHHHHCC-----------CCCCEECCCCE--------EEEECCCC-
T ss_conf 9999999997----4-99799989998588899-9998465-----------67731136982--------89954666-
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHCCCC
Q ss_conf 258883348988999999999712897
Q gi|254780799|r 689 VQRIHGPFVSDIEVEKVVSHLKTQGEA 715 (806)
Q Consensus 689 ~~r~~g~~v~~~ev~~v~~~~~~q~~~ 715 (806)
.++..+++.+.+.++++++++++-.
T Consensus 77 --~i~~~~i~~~~~~~i~~~~~~~~~~ 101 (267)
T d1nf2a_ 77 --VILNEKIPPEVAKDIIEYIKPLNVH 101 (267)
T ss_dssp --EEEECCBCHHHHHHHHHHHGGGCCC
T ss_pred --CCCCCCCCHHHHHHHHHHHHHCCCE
T ss_conf --4324579989999999999733842
No 341
>d2edua1 a.60.2.7 (A:8-98) KIF22, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.12 E-value=9 Score=14.50 Aligned_cols=35 Identities=23% Similarity=0.119 Sum_probs=27.2
Q ss_pred HHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCC
Q ss_conf 96598500014222001177899999999977986
Q gi|254780799|r 751 LRDNKASISYIQRRLGIGYNRAASIIENMEEKGVI 785 (806)
Q Consensus 751 ~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv 785 (806)
..=-+||..-|++-=.|||.+|.+||+.-++.|-.
T Consensus 25 ~~iNtAs~~eL~~lpgig~~~A~~II~yR~~~G~f 59 (91)
T d2edua1 25 DLLNEGSARDLRSLQRIGPKKAQLIVGWRELHGPF 59 (91)
T ss_dssp HHHHHSCHHHHHHSTTCCHHHHHHHHHHHHHHCCC
T ss_pred CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 31556999999647898999999999999985997
No 342
>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=29.99 E-value=12 Score=13.65 Aligned_cols=53 Identities=15% Similarity=0.131 Sum_probs=31.6
Q ss_pred CEEEEEEEECCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC-CCCCCC
Q ss_conf 32899841044244444321478639999978899998863001210-003886
Q gi|254780799|r 349 QGEIVNVRPGPVITLYELEPAPGIKSSRIIGLSDDIARSMSAISARV-AVIPRR 401 (806)
Q Consensus 349 e~~Vv~v~pGPVVTrYEi~PApGVKvSKI~nLadDIA~aLsa~svRI-apIPGK 401 (806)
.|.|+++...-...-+.-.++=+.==.-+.+|.+-+|+-++-..||| +.-||-
T Consensus 137 ~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~ 190 (259)
T d1xq1a_ 137 CGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAV 190 (259)
T ss_dssp SCEEEEEC----------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf 333322221000024432222244333203346999987512685999865685
No 343
>d1d8wa_ c.1.15.2 (A:) L-rhamnose isomerase {Escherichia coli [TaxId: 562]}
Probab=29.92 E-value=12 Score=13.64 Aligned_cols=94 Identities=20% Similarity=0.253 Sum_probs=58.3
Q ss_pred HHHHHHHCCCCEEEEEEEECCEEEEEEEEEC------------CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
Q ss_conf 9999742486328998410442444443214------------7863999997889999886300121000388612555
Q gi|254780799|r 339 LKSVLSDFGIQGEIVNVRPGPVITLYELEPA------------PGIKSSRIIGLSDDIARSMSAISARVAVIPRRNAIGI 406 (806)
Q Consensus 339 LE~tL~dFGVe~~Vv~v~pGPVVTrYEi~PA------------pGVKvSKI~nLadDIA~aLsa~svRIapIPGK~~VGI 406 (806)
..++|++|-| .+-... |=-||+||..-. || |..-+-.|-.|++.++ +-|||+..|-.
T Consensus 24 al~~L~~~~I--s~h~Wq-Gddv~gFe~~~g~ltGGi~~tGnyPG-~aR~~~E~~~D~~~~~-------~Lipg~~~vnL 92 (416)
T d1d8wa_ 24 ALRQLDRLPV--SMHCWQ-GDDVSGFENPEGSLTGGIQATGNYPG-KARNASELRADLEQAM-------RLIPGPKRLNL 92 (416)
T ss_dssp HHHHHTTCCE--EEEGGG-GTTTCCCCC--------------CSC-CCCSHHHHHHHHHHHH-------HTSCSCEEEEE
T ss_pred HHHHHHCCCE--EEECCC-CCCCCCCCCCCCCCCCCCEECCCCCC-CCCCHHHHHHHHHHHH-------HHCCCCCCCEE
T ss_conf 9999854844--430366-78765534677767776021278899-8899899998899999-------85689984000
Q ss_pred EECCCCCCEEEEHHHCCCHHHHHCC-CCCHHHCCCCCC
Q ss_conf 3024566238734230721343022-100021045666
Q gi|254780799|r 407 ELPNDIRETVMLRDLIVSRVFEKNQ-CDLAINLGKSIE 443 (806)
Q Consensus 407 EiPN~~r~~V~lreil~s~~f~~s~-~~L~iaLGKdI~ 443 (806)
-+|=.......=|+=++-+.|++=. ..=...||-|+.
T Consensus 93 H~~y~~~~~~vdrd~i~p~hf~~w~~wAk~~glglDfN 130 (416)
T d1d8wa_ 93 HAIYLESDTPVSRDQIKPEHFKNWVEWAKANQLGLDFN 130 (416)
T ss_dssp EGGGCCCSSCCCGGGCCGGGGHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 33320258866412258574899999999749774757
No 344
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=29.72 E-value=12 Score=13.62 Aligned_cols=19 Identities=26% Similarity=0.732 Sum_probs=13.9
Q ss_pred EEEEECCCCHHHHHHHHHH
Q ss_conf 3553047740679999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI 475 (806)
+.|.|..||||+.-.+.++
T Consensus 3 Ivl~GPsGsGK~tl~~~L~ 21 (190)
T d1lvga_ 3 VVLSGPSGAGKSTLLKKLF 21 (190)
T ss_dssp EEEECCTTSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
T ss_conf 9999999999999999999
No 345
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=29.67 E-value=9 Score=14.52 Aligned_cols=12 Identities=50% Similarity=0.656 Sum_probs=8.9
Q ss_pred EEECCCCHHHHH
Q ss_conf 530477406799
Q gi|254780799|r 459 IAGTTGSGKSVA 470 (806)
Q Consensus 459 IAGtTGSGKSV~ 470 (806)
+-|..|||||--
T Consensus 5 liG~~GsGKsTi 16 (161)
T d1viaa_ 5 FIGFMGSGKSTL 16 (161)
T ss_dssp EECCTTSCHHHH
T ss_pred EECCCCCCHHHH
T ss_conf 989999988999
No 346
>d1fftb2 f.17.2.1 (B:27-117) Cytochrome O ubiquinol oxidase, subunit II {Escherichia coli [TaxId: 562]}
Probab=29.61 E-value=6.4 Score=15.61 Aligned_cols=39 Identities=15% Similarity=0.071 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 013467899999999999999999999999999998276
Q gi|254780799|r 66 FLGYGGAIFADVAIQFFGIASVFFLPPPTMWALSLLFDK 104 (806)
Q Consensus 66 ~~G~lGA~iAd~L~~lFG~~Ayllpl~Ll~~g~~ll~~k 104 (806)
-.|..+..+.+++...|+++..++.+......+.+++.|
T Consensus 6 P~gp~a~~i~~L~~~~~~i~~iv~v~V~~~~~~~~~ryR 44 (91)
T d1fftb2 6 PKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYR 44 (91)
T ss_dssp CCSCCHHHHHHHHHHHHHHTTTTTTHHHHHHHTTTTTTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_conf 999789999999999999999999999999976403665
No 347
>d2isya1 a.4.5.24 (A:2-64) Iron-dependent regulator IdeR {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=29.35 E-value=12 Score=13.58 Aligned_cols=44 Identities=18% Similarity=0.282 Sum_probs=35.9
Q ss_pred HHHHH-HHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 89999-999965985000142220011778999999999779868
Q gi|254780799|r 743 YKQAV-DIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIG 786 (806)
Q Consensus 743 ~~~a~-~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~ 786 (806)
|-+++ ++--+.+.++++-|-++|.+--.-+.++|..|+++|.|-
T Consensus 10 YL~~I~~L~~~~~~v~~~~iA~~L~vs~~SVt~mvkrL~~~Glv~ 54 (63)
T d2isya1 10 YLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLR 54 (63)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEE
T ss_conf 999999998558977099999996899443999999999888988
No 348
>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}
Probab=29.11 E-value=12 Score=13.55 Aligned_cols=24 Identities=17% Similarity=0.339 Sum_probs=16.5
Q ss_pred HHHHHHHHCCEEEEEEECCCCCCC
Q ss_conf 999866414237999965777535
Q gi|254780799|r 616 RLAQMARASGIHVIMATQRPSVDV 639 (806)
Q Consensus 616 rlaq~ara~GiHli~aTqrPsvdv 639 (806)
+.-++.|+.||++++||=||-..+
T Consensus 28 ~al~~l~~~Gi~~~i~TGR~~~~~ 51 (232)
T d1xvia_ 28 PWLTRLREANVPVILCSSKTSAEM 51 (232)
T ss_dssp HHHHHHHHTTCCEEEECSSCHHHH
T ss_pred HHHHHHHHCCCEEEEEECCCHHHC
T ss_conf 999999977998999968973653
No 349
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.04 E-value=12 Score=13.54 Aligned_cols=43 Identities=19% Similarity=0.365 Sum_probs=25.8
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCHHH---------EEEEEECCCHHHHHHCC
Q ss_conf 355304774067999999999998299578---------47888523100111027
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLLYRMTPAQ---------CRLIMIDPKMLELSVYD 503 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlLyk~~P~e---------vkliliDPK~vEls~Y~ 503 (806)
+++-|..|+|||--+|.++- ..-+++ .+.+.++-+.+++.+++
T Consensus 6 vvllG~~~vGKTSli~r~~~----~~f~~~~~~t~~~~~~~~~~~~~~~~~l~i~D 57 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLLISYTT----NKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFD 57 (191)
T ss_dssp EEEEESTTSSHHHHHHHHHH----SCCCSSCCCCSEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHH----CCCCCCCCCCEEEECCEEEEECCCEEEEECCC
T ss_conf 99999999699999999971----99998758831021002575079424650244
No 350
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.01 E-value=12 Score=13.54 Aligned_cols=21 Identities=19% Similarity=0.528 Sum_probs=17.5
Q ss_pred EEEEEECCCCHHHHHHHHHHH
Q ss_conf 235530477406799999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMIL 476 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~ 476 (806)
-+++-|..|+|||--||.++.
T Consensus 7 Ki~lvG~~~vGKTsLi~~l~~ 27 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLVRRFTQ 27 (171)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
T ss_conf 999999999198999999972
No 351
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=28.96 E-value=10 Score=14.15 Aligned_cols=14 Identities=21% Similarity=0.665 Sum_probs=10.1
Q ss_pred EEEEECCCCHHHHH
Q ss_conf 35530477406799
Q gi|254780799|r 457 LLIAGTTGSGKSVA 470 (806)
Q Consensus 457 LLIAGtTGSGKSV~ 470 (806)
+.+-|..|||||--
T Consensus 5 Iil~G~~GsGKSTi 18 (170)
T d1e6ca_ 5 IFMVGARGCGMTTV 18 (170)
T ss_dssp EEEESCTTSSHHHH
T ss_pred EEEECCCCCCHHHH
T ss_conf 89988999988999
No 352
>d1pvda2 c.36.1.5 (A:2-181) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=28.86 E-value=12 Score=13.52 Aligned_cols=26 Identities=12% Similarity=0.215 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHCCCC-CCCCCCCCEEE
Q ss_conf 889999886300121-00038861255
Q gi|254780799|r 380 LSDDIARSMSAISAR-VAVIPRRNAIG 405 (806)
Q Consensus 380 LadDIA~aLsa~svR-IapIPGK~~VG 405 (806)
+++=|+..|....|+ |--|||.....
T Consensus 5 ~~~~i~~~L~~~Gv~~vFgipG~~~~~ 31 (180)
T d1pvda2 5 LGKYLFERLKQVNVNTVFGLPGDFNLS 31 (180)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCTTTHH
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCHHH
T ss_conf 999999999987999999907802799
No 353
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.86 E-value=12 Score=13.52 Aligned_cols=18 Identities=56% Similarity=0.700 Sum_probs=15.2
Q ss_pred EEEEECCCCHHHHHHHHH
Q ss_conf 355304774067999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTM 474 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~i 474 (806)
+++-|..|+|||--++.+
T Consensus 5 iv~lG~~~vGKTsll~r~ 22 (200)
T d2bcjq2 5 LLLLGTGESGKSTFIKQM 22 (200)
T ss_dssp EEEEESTTSSHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHH
T ss_conf 999999999889999999
No 354
>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}
Probab=28.75 E-value=12 Score=13.50 Aligned_cols=15 Identities=27% Similarity=0.483 Sum_probs=7.3
Q ss_pred HHHCCEEEEEEECCC
Q ss_conf 641423799996577
Q gi|254780799|r 621 ARASGIHVIMATQRP 635 (806)
Q Consensus 621 ara~GiHli~aTqrP 635 (806)
+++.||+++++|-||
T Consensus 31 l~~~gi~v~~~TGR~ 45 (230)
T d1wr8a_ 31 AESLGIPIMLVTGNT 45 (230)
T ss_dssp HHHTTCCEEEECSSC
T ss_pred HHHCCCEEEEEECCC
T ss_conf 986799599992786
No 355
>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}
Probab=28.75 E-value=12 Score=13.50 Aligned_cols=24 Identities=21% Similarity=0.322 Sum_probs=19.3
Q ss_pred CEEEE-E-ECCCCHHHHHHHHHHHHH
Q ss_conf 32588-8-334898899999999971
Q gi|254780799|r 688 RVQRI-H-GPFVSDIEVEKVVSHLKT 711 (806)
Q Consensus 688 ~~~r~-~-g~~v~~~ev~~v~~~~~~ 711 (806)
+..|| + |.+-+.+||+++++.+++
T Consensus 349 ~~~Ris~~g~~~t~edi~~lv~al~~ 374 (377)
T d1vjoa_ 349 KVWRVGLMGFNSRKESVDQLIPALEQ 374 (377)
T ss_dssp TEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 98998267578999999999999999
No 356
>d1kb0a1 a.3.1.6 (A:579-675) Quinoprotein alcohol dehydrogenase, C-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=28.69 E-value=6 Score=15.85 Aligned_cols=19 Identities=16% Similarity=0.253 Sum_probs=15.3
Q ss_pred CCCHHHHHHHHHHHHHCCC
Q ss_conf 4898899999999971289
Q gi|254780799|r 696 FVSDIEVEKVVSHLKTQGE 714 (806)
Q Consensus 696 ~v~~~ev~~v~~~~~~q~~ 714 (806)
-.||+||..|+.|++++..
T Consensus 75 ~Ls~~ei~~i~aYl~~~ad 93 (97)
T d1kb0a1 75 KLSGDDVESLKAFIQGTAD 93 (97)
T ss_dssp TSCTTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCC
T ss_conf 7999999999999987455
No 357
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=28.59 E-value=12 Score=13.49 Aligned_cols=19 Identities=42% Similarity=0.651 Sum_probs=15.5
Q ss_pred EEEEEECCCCHHHHHHHHH
Q ss_conf 2355304774067999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTM 474 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~i 474 (806)
++++-|-.|+|||--||-+
T Consensus 4 KivllG~~~vGKTsl~~r~ 22 (195)
T d1svsa1 4 KLLLLGAGESGKSTIVKQM 22 (195)
T ss_dssp EEEEECSTTSSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
T ss_conf 9999999998889999988
No 358
>d2p4wa1 a.4.5.64 (A:1-194) Transcriptional regulatory protein PF1790 {Pyrococcus furiosus [TaxId: 2261]}
Probab=28.54 E-value=12 Score=13.48 Aligned_cols=23 Identities=17% Similarity=0.294 Sum_probs=10.1
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 34468888732100588999999
Q gi|254780799|r 596 IDEMADLMMVARKDIESAVQRLA 618 (806)
Q Consensus 596 iDElaDlmm~~~~~ve~~i~rla 618 (806)
+-|+|+.+-+...-|-..+..|.
T Consensus 31 ~~ela~~l~~s~~~v~~HL~~L~ 53 (194)
T d2p4wa1 31 VSELSRELGVGQKAVLEHLRILE 53 (194)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 99999998909989999999999
No 359
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=28.37 E-value=12 Score=13.53 Aligned_cols=19 Identities=21% Similarity=0.534 Sum_probs=16.2
Q ss_pred EEEEEECCCCHHHHHHHHH
Q ss_conf 2355304774067999999
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTM 474 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~i 474 (806)
++++.|.=|+|||--||.+
T Consensus 14 kIvlvG~~~vGKTSli~rl 32 (173)
T d1e0sa_ 14 RILMLGLDAAGKTTILYKL 32 (173)
T ss_dssp EEEEEEETTSSHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHH
T ss_conf 9999999998789999998
No 360
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]}
Probab=27.82 E-value=13 Score=13.39 Aligned_cols=27 Identities=15% Similarity=0.183 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 566545789999997424863289984
Q gi|254780799|r 329 PKVMQNNACTLKSVLSDFGIQGEIVNV 355 (806)
Q Consensus 329 ~eeL~~nA~lLE~tL~dFGVe~~Vv~v 355 (806)
++++..-.+.+.++|+++|+....++|
T Consensus 107 ~~~~~~~t~~v~~~~k~~~~~~~~vqI 133 (334)
T d1foba_ 107 KWQLYNYTLEVCNTFAENDIDIEIISI 133 (334)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf 999999999999999836998328883
No 361
>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=27.81 E-value=11 Score=13.98 Aligned_cols=13 Identities=38% Similarity=0.963 Sum_probs=6.7
Q ss_pred CCCCEEEEEECCC
Q ss_conf 0020235530477
Q gi|254780799|r 452 ARMPHLLIAGTTG 464 (806)
Q Consensus 452 akMPHLLIAGtTG 464 (806)
|.||-.||.|+||
T Consensus 1 ~~~~tVlVtGatG 13 (252)
T d2q46a1 1 ANLPTVLVTGASG 13 (252)
T ss_dssp CSCCEEEEESTTS
T ss_pred CCCCEEEEECCCC
T ss_conf 9988899989865
No 362
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=27.61 E-value=11 Score=13.80 Aligned_cols=15 Identities=27% Similarity=0.576 Sum_probs=10.7
Q ss_pred EEEEECCCCHHHHHH
Q ss_conf 355304774067999
Q gi|254780799|r 457 LLIAGTTGSGKSVAI 471 (806)
Q Consensus 457 LLIAGtTGSGKSV~i 471 (806)
+.+=|..|||||.--
T Consensus 6 iil~G~pGSGKsT~a 20 (190)
T d1ak2a1 6 AVLLGPPGAGKGTQA 20 (190)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
T ss_conf 999899999889999
No 363
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=27.53 E-value=13 Score=13.35 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=18.2
Q ss_pred HHHHHHHHHCCCEEEEHHHHHHCCCHH----HHHHHHHHHHHC
Q ss_conf 999999996598500014222001177----899999999977
Q gi|254780799|r 744 KQAVDIVLRDNKASISYIQRRLGIGYN----RAASIIENMEEK 782 (806)
Q Consensus 744 ~~a~~~v~~~~~~s~s~lqr~~~igy~----raar~~~~~e~~ 782 (806)
.++++.+++.-.. =+..+++|-+ |+. ..++||+.
T Consensus 673 ~~~~~~il~~~~~----~~~~~~iGkTkVFlr~~-~~~~LE~~ 710 (712)
T d1d0xa2 673 QKATDAVLKHLNI----DPEQYRFGITKIFFRAG-QLARIEEA 710 (712)
T ss_dssp HHHHHHHHHHTTC----CGGGEEECSSEEEECTT-HHHHHHTS
T ss_pred HHHHHHHHHHCCC----CCCCEEECCCEEEECCC-HHHHHHHH
T ss_conf 9999999997697----80128854986997377-99999875
No 364
>d1rlka_ c.131.1.1 (A:) Hypothetical protein TA0108 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=27.29 E-value=13 Score=13.33 Aligned_cols=39 Identities=36% Similarity=0.492 Sum_probs=15.4
Q ss_pred HHHHHHHCCCCEEEEE------EEECCEEEEEEEEECCCCCHHHHH
Q ss_conf 9999742486328998------410442444443214786399999
Q gi|254780799|r 339 LKSVLSDFGIQGEIVN------VRPGPVITLYELEPAPGIKSSRII 378 (806)
Q Consensus 339 LE~tL~dFGVe~~Vv~------v~pGPVVTrYEi~PApGVKvSKI~ 378 (806)
|.++.++.|+...++. +-| +++|.--|-|+|--++.+|+
T Consensus 66 l~~~a~~~~l~~~~v~DAG~Tei~p-gt~TvlaigP~~~~~id~it 110 (116)
T d1rlka_ 66 IKRMADSMGIVNEIVQDRGYTQVEP-GTITCIGLGPDEEEKLDKIT 110 (116)
T ss_dssp HHHHHHHHTCCEEEEECCCSSSSSC-CCEEEEEEEEEEHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEECCCCCCCCC-CCEEEEEECCCCHHHHHHHH
T ss_conf 9999998799889998799761699-98589997878888988974
No 365
>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.19 E-value=13 Score=13.31 Aligned_cols=24 Identities=13% Similarity=0.211 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHCCCCC-CCCCC
Q ss_conf 9978899998863001210-00388
Q gi|254780799|r 377 IIGLSDDIARSMSAISARV-AVIPR 400 (806)
Q Consensus 377 I~nLadDIA~aLsa~svRI-apIPG 400 (806)
+.+|++-+|.-++-..||| +.-||
T Consensus 162 l~~l~~~la~El~~~gIrVn~V~PG 186 (285)
T d1jtva_ 162 LEGLCESLAVLLLPFGVHLSLIECG 186 (285)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 9999999999861239489999549
No 366
>d2v7fa1 a.4.5.84 (A:2-150) Ribosomal protein S19e {Pyrococcus abyssi [TaxId: 29292]}
Probab=26.86 E-value=13 Score=13.27 Aligned_cols=87 Identities=21% Similarity=0.263 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---HHCCCEEEEHHHHHHCCCHHH-
Q ss_conf 8899999999971289---742110012455666778888877770389999999---965985000142220011778-
Q gi|254780799|r 699 DIEVEKVVSHLKTQGE---AKYIDIKDKILLNEEMRFSENSSVADDLYKQAVDIV---LRDNKASISYIQRRLGIGYNR- 771 (806)
Q Consensus 699 ~~ev~~v~~~~~~q~~---~~y~~~~~~~~~~~~~~~~~~~~~~d~l~~~a~~~v---~~~~~~s~s~lqr~~~igy~r- 771 (806)
|.=|+++.+|+|+.++ |++.+-+-.....+- .-.+.|=.|-.|+.+. --.+-..++.|.+.++=-.||
T Consensus 9 ~~~I~~lA~~LK~~~ki~~P~W~~~vKTg~~kE~-----~P~~~DW~y~RaASilRkiY~~gpvGv~~Lr~~YGg~k~rG 83 (149)
T d2v7fa1 9 DLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKER-----LPEQEDWWYYRVASILRRVYLDGPVGIERLRTYYGGRKNRG 83 (149)
T ss_dssp HHHHHHHHHHHTTCTTCCCCSCGGGCCC-----------CHHHHTHHHHHHHHHHHHHHHHCSBCHHHHHHHHCC----C
T ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCC-----CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
T ss_conf 9999999999976699799865303102554557-----99887527999999999998708963889999978898899
Q ss_pred ------------H-HHHHHHHHHCCCCCHHHC
Q ss_conf ------------9-999999997798680227
Q gi|254780799|r 772 ------------A-ASIIENMEEKGVIGPASS 790 (806)
Q Consensus 772 ------------a-ar~~~~~e~~giv~~~~g 790 (806)
. =.++.|||..|+|-...+
T Consensus 84 ~~P~h~~~~Sg~iiR~~LQqLE~~glVek~~~ 115 (149)
T d2v7fa1 84 HAPERFYKAGGSIIRKALQQLEAAGFVEKVPG 115 (149)
T ss_dssp CCTTSCCCHHHHHHHHHHHHHHHTTSEEEETT
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCEEECCC
T ss_conf 99987677763899999999986888667699
No 367
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}
Probab=26.80 E-value=6.8 Score=15.41 Aligned_cols=40 Identities=13% Similarity=0.149 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHCCH---HHEEEEEECCCHHHHHHCCCCHHHH
Q ss_conf 9999999999982995---7847888523100111027703431
Q gi|254780799|r 469 VAINTMILSLLYRMTP---AQCRLIMIDPKMLELSVYDGIPNLL 509 (806)
Q Consensus 469 V~iN~iI~SlLyk~~P---~evkliliDPK~vEls~Y~~iPHLl 509 (806)
|+--.++.++|.+... +|+-|+=||+.++| ..+..+-|..
T Consensus 14 v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~-~~~~~~~~~~ 56 (167)
T d1u8xx1 14 TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQD-RIAGACDVFI 56 (167)
T ss_dssp SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHH-HHHHHHHHHH
T ss_conf 136799999995103168788999838836779-9999999887
No 368
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.46 E-value=13 Score=13.22 Aligned_cols=47 Identities=17% Similarity=0.379 Sum_probs=27.7
Q ss_pred EEEEECCCCHHHHHHHHHHHHHH--HHCCHH---HEE--EEEECCCHHHHHHCC
Q ss_conf 35530477406799999999999--829957---847--888523100111027
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTMILSLL--YRMTPA---QCR--LIMIDPKMLELSVYD 503 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~iI~SlL--yk~~P~---evk--liliDPK~vEls~Y~ 503 (806)
++|-|..|+|||-.||.++.+=- -...|. +++ -+.++-..++|.+++
T Consensus 9 i~vvG~~~vGKTsli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~D 62 (170)
T d2g6ba1 9 VMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWD 62 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHSCCCCCCCCCCCSCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEE
T ss_conf 999999992999999999719988654120230036777888548389999998
No 369
>d2duya1 a.60.2.7 (A:11-75) Uncharacterized protein TTHA1967 {Thermus thermophilus [TaxId: 274]}
Probab=26.35 E-value=13 Score=13.42 Aligned_cols=25 Identities=36% Similarity=0.388 Sum_probs=17.7
Q ss_pred CCEEEEHHHHHHCCCHHHHHHHHHH
Q ss_conf 9850001422200117789999999
Q gi|254780799|r 754 NKASISYIQRRLGIGYNRAASIIEN 778 (806)
Q Consensus 754 ~~~s~s~lqr~~~igy~raar~~~~ 778 (806)
.+||.+.|++--.||+.+|.+|++.
T Consensus 12 NtA~~~eL~~lpgig~~~A~~Iv~~ 36 (65)
T d2duya1 12 NEASLEELMALPGIGPVLARRIVEG 36 (65)
T ss_dssp TTCCHHHHTTSTTCCHHHHHHHHHT
T ss_pred CCCCHHHHHHCCCCCHHHHHHHHHC
T ss_conf 2288999977789899999999984
No 370
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=25.84 E-value=14 Score=13.14 Aligned_cols=51 Identities=24% Similarity=0.271 Sum_probs=29.8
Q ss_pred CCCHHHCCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECC
Q ss_conf 100021045666666785410020235530477406799999999999829957847888523
Q gi|254780799|r 432 CDLAINLGKSIEGKPIIADLARMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDP 494 (806)
Q Consensus 432 ~~L~iaLGKdI~G~pvv~DLakMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDP 494 (806)
..|-.+||- | -+.+.==..|+|-.|||||-.-..++....- ..-+-+.||-
T Consensus 43 ~~lD~~Lg~---G-----Gip~g~itei~G~~~sGKT~l~l~~~~~aqk----~g~~v~yiDt 93 (268)
T d1xp8a1 43 LSLDLALGV---G-----GIPRGRITEIYGPESGGKTTLALAIVAQAQK----AGGTCAFIDA 93 (268)
T ss_dssp HHHHHHTSS---S-----SEETTSEEEEEESTTSSHHHHHHHHHHHHHH----TTCCEEEEES
T ss_pred HHHHHHHCC---C-----CCCCCEEEEEECCCCCCHHHHHHHHHHHHHH----CCCEEEEEEC
T ss_conf 899997567---9-----8667547898058765227999999999970----7998999988
No 371
>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}
Probab=25.82 E-value=13 Score=13.39 Aligned_cols=47 Identities=15% Similarity=0.284 Sum_probs=27.3
Q ss_pred CEEEEEEEECCEEEEEEEEECCCCC---HH--HHHHHHHHHHHHHHHCCCCC-CCCCC
Q ss_conf 3289984104424444432147863---99--99978899998863001210-00388
Q gi|254780799|r 349 QGEIVNVRPGPVITLYELEPAPGIK---SS--RIIGLSDDIARSMSAISARV-AVIPR 400 (806)
Q Consensus 349 e~~Vv~v~pGPVVTrYEi~PApGVK---vS--KI~nLadDIA~aLsa~svRI-apIPG 400 (806)
.|.|+++.-.-.. .|.||-= +| =+.+|.+-+|+.++...||| +.-||
T Consensus 134 ~G~Iv~isS~~~~-----~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG 186 (260)
T d1x1ta1 134 FGRIINIASAHGL-----VASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPG 186 (260)
T ss_dssp CEEEEEECCGGGT-----SCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEEC
T ss_pred CCEEEECCCCCCE-----ECCCCCCHHHHHHHHHHHHHHHHHHHHCHHCCEEEEEECC
T ss_conf 8247520354100-----0247863316513657876999999963008679999519
No 372
>d2g9wa1 a.4.5.39 (A:3-124) Hypothetical protein Rv1846c {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=25.70 E-value=14 Score=13.13 Aligned_cols=14 Identities=7% Similarity=-0.052 Sum_probs=6.0
Q ss_pred CCHHHHHHHHHHHH
Q ss_conf 32566545789999
Q gi|254780799|r 327 FSPKVMQNNACTLK 340 (806)
Q Consensus 327 ~s~eeL~~nA~lLE 340 (806)
+|++++++..++|.
T Consensus 105 ls~~el~~L~~ll~ 118 (122)
T d2g9wa1 105 VGADEADALRRALA 118 (122)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
T ss_conf 99999999999998
No 373
>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}
Probab=25.68 E-value=5.3 Score=16.25 Aligned_cols=50 Identities=22% Similarity=0.265 Sum_probs=31.2
Q ss_pred CEEEEEEEECCEEEEEEEEECCCCCHH--HHHHHHHHHHHHHHHCCCCC-CCCCC
Q ss_conf 328998410442444443214786399--99978899998863001210-00388
Q gi|254780799|r 349 QGEIVNVRPGPVITLYELEPAPGIKSS--RIIGLSDDIARSMSAISARV-AVIPR 400 (806)
Q Consensus 349 e~~Vv~v~pGPVVTrYEi~PApGVKvS--KI~nLadDIA~aLsa~svRI-apIPG 400 (806)
.+.++.+.-.-...-..-.++-+ +| =+.+|.+-+|+.++...||| +.-||
T Consensus 117 ~G~ii~i~S~~~~~~~~~~~~Y~--asKaal~~ltk~lA~ela~~gIrVN~I~PG 169 (234)
T d1o5ia_ 117 WGRIVAITSFSVISPIENLYTSN--SARMALTGFLKTLSFEVAPYGITVNCVAPG 169 (234)
T ss_dssp CEEEEEECCGGGTSCCTTBHHHH--HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCH--HHHHHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 66543224310235643221213--479999999999998735438579623557
No 374
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=25.66 E-value=14 Score=13.12 Aligned_cols=71 Identities=23% Similarity=0.315 Sum_probs=39.4
Q ss_pred CEEEEEHHHHHHHH--------------HHCCCHHHHHHHHHHHHHHHCCEEEEEEECCC-CCCCCCH--------H-HH
Q ss_conf 86877634468888--------------73210058899999986641423799996577-7535543--------5-54
Q gi|254780799|r 590 PYIVVVIDEMADLM--------------MVARKDIESAVQRLAQMARASGIHVIMATQRP-SVDVITG--------T-IK 645 (806)
Q Consensus 590 p~ivviiDElaDlm--------------m~~~~~ve~~i~rlaq~ara~GiHli~aTqrP-svdvitg--------~-ik 645 (806)
|..+||||=++-|- ....+.+-..+.+|+..++-.++.+|+-.|-- .++...| . .+
T Consensus 132 ~~~liViDSi~al~~~~e~~~~~~~~~~~~~a~~l~~~~~~l~~~~~~~~~~vi~~NQv~~~~~~~~g~~~~~~GG~al~ 211 (263)
T d1u94a1 132 AVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALK 211 (263)
T ss_dssp CCSEEEEECGGGCCCHHHHTTC------CHHHHHHHHHHHHHHHHHHHHTCEEEEEEC--------------CTTCSHHH
T ss_pred CCCEEEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHH
T ss_conf 99899998865566602102652310478999999999999987662058169998789961566568874313413100
Q ss_pred HCCCCEEEEEECCCC
Q ss_conf 110251587645866
Q gi|254780799|r 646 ANFPTRISFQVSSKI 660 (806)
Q Consensus 646 an~p~riaf~v~s~~ 660 (806)
-+--+||-|+-..+.
T Consensus 212 ~~~~~rl~l~k~~~~ 226 (263)
T d1u94a1 212 FYASVRLDIRRIGAV 226 (263)
T ss_dssp HHCSEEEEEEEEEEE
T ss_pred EEEEEEEEEEECCCC
T ss_conf 315899999953420
No 375
>d2fexa1 c.23.16.2 (A:1-188) Hypothetical protein Atu0886 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=25.10 E-value=14 Score=13.05 Aligned_cols=92 Identities=15% Similarity=0.169 Sum_probs=45.0
Q ss_pred EEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCEEEEEECCCCCCHHHCCCCCH
Q ss_conf 87763446888873210058899999986641423799996577753554355411025158764586642123388645
Q gi|254780799|r 592 IVVVIDEMADLMMVARKDIESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKANFPTRISFQVSSKIDSRTILGEQGA 671 (806)
Q Consensus 592 ivviiDElaDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ikan~p~riaf~v~s~~dSrtild~~ga 671 (806)
.|++.|-|+|+. +-..+ +.+-|++|++..+++ |+-.-||+.= =+..++.-.+|. .-
T Consensus 5 ~vll~~gf~~~E------~~~~~---~~l~~~~g~~v~~vs--~~~~~V~s~~------G~~v~~d~~l~~------~~- 60 (188)
T d2fexa1 5 AIALAQDFADWE------PALLA---AAARSYLGVEIVHAT--PDGMPVTSMG------GLKVTPDTSYDA------LD- 60 (188)
T ss_dssp EEECCTTBCTTS------SHHHH---HHHHHHSCCEEEEEE--TTSSCEECTT------CCEEECSEEGGG------CC-
T ss_pred EEEECCCHHHHH------HHHHH---HHHHHCCCCEEEEEE--CCCCCEECCC------CCEEEECCCHHH------CC-
T ss_conf 999679852999------99999---997541896899995--7999678489------998961676588------89-
Q ss_pred HHHCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCC
Q ss_conf 78658875477368983258883348988999999999712897
Q gi|254780799|r 672 EQLLGQGDMLYMTGGGRVQRIHGPFVSDIEVEKVVSHLKTQGEA 715 (806)
Q Consensus 672 e~Llg~gdml~~~~~~~~~r~~g~~v~~~ev~~v~~~~~~q~~~ 715 (806)
...=|.|++|||..+. .-.++++.+.+.....++++
T Consensus 61 ---~~~~D~liipGG~~~~-----~~~~~~l~~~lr~~~~~~~~ 96 (188)
T d2fexa1 61 ---PVDIDALVIPGGLSWE-----KGTAADLGGLVKRFRDRDRL 96 (188)
T ss_dssp ---TTTCSEEEECCBSHHH-----HTCCCCCHHHHHHHHHTTCE
T ss_pred ---HHHCCEEEECCCCCCC-----CCCCHHHHHHHHHHHHHCCE
T ss_conf ---3033589964776643-----34419999999999973997
No 376
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]}
Probab=24.95 E-value=14 Score=13.03 Aligned_cols=70 Identities=16% Similarity=0.182 Sum_probs=40.0
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEE------CCCCCHHHHHHHHHHHHHHHHHCCCC-CC-CCC
Q ss_conf 25665457899999974248632899841044244444321------47863999997889999886300121-00-038
Q gi|254780799|r 328 SPKVMQNNACTLKSVLSDFGIQGEIVNVRPGPVITLYELEP------APGIKSSRIIGLSDDIARSMSAISAR-VA-VIP 399 (806)
Q Consensus 328 s~eeL~~nA~lLE~tL~dFGVe~~Vv~v~pGPVVTrYEi~P------ApGVKvSKI~nLadDIA~aLsa~svR-Ia-pIP 399 (806)
+.+..++.+..+=+-|+..||+. .-+||+=..- .| +-|--...+..++....+.|...+|- ++ =-|
T Consensus 91 ~~~la~~~g~~~~~el~~~Gin~-----~~aPv~Dv~~-~~~~i~~rsfg~Dp~~v~~~a~a~i~G~q~~gv~~~~KHFP 164 (330)
T d1tr9a_ 91 GVELAEQGGWLMAAELIAHDVDL-----SFAPVLDMGF-ACKAIGNRAFGEDVQTVLKHSSAFLRGMKAVGMATTGKHFP 164 (330)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCE-----ECCCBCCCCS-CSTTTGGGSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEET
T ss_pred CHHHHHHHHHHHHHHHHHHCCCC-----CCCHHCCCCC-CCCHHHHCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCEE
T ss_conf 89999999999889999838884-----4000013554-42045432354320187775434154602334331014020
Q ss_pred CCCE
Q ss_conf 8612
Q gi|254780799|r 400 RRNA 403 (806)
Q Consensus 400 GK~~ 403 (806)
|-+.
T Consensus 165 G~G~ 168 (330)
T d1tr9a_ 165 GHGA 168 (330)
T ss_dssp CCTT
T ss_pred CCCC
T ss_conf 3577
No 377
>d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]}
Probab=24.87 E-value=14 Score=13.02 Aligned_cols=61 Identities=11% Similarity=0.125 Sum_probs=35.8
Q ss_pred CCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEE-CCCCC----HHHHHHH
Q ss_conf 620366135332001245556325665457899999974248632899841044244444321-47863----9999978
Q gi|254780799|r 306 TFVLPSKEILSTSQSPVNQMTFSPKVMQNNACTLKSVLSDFGIQGEIVNVRPGPVITLYELEP-APGIK----SSRIIGL 380 (806)
Q Consensus 306 ~YkLPsLdLL~~~~~~~~~~~~s~eeL~~nA~lLE~tL~dFGVe~~Vv~v~pGPVVTrYEi~P-ApGVK----vSKI~nL 380 (806)
-|.+=|||...+ -.+.+.+++ .| ++|++-||++-.++|-=|= +|| +||.= .-++..|
T Consensus 13 v~VmlPLd~v~~--------~~~~~~~~~---~L-~~LK~aGV~gV~vdVwWGi------vE~~~Pg~Ydws~yd~l~~m 74 (417)
T d1vema2 13 AYLMAPLKKIPE--------VTNWETFEN---DL-RWAKQNGFYAITVDFWWGD------MEKNGDQQFDFSYAQRFAQS 74 (417)
T ss_dssp EEEECCSSCGGG--------TSCHHHHHH---HH-HHHHHTTEEEEEEEEEHHH------HTCSSTTCCCCHHHHHHHHH
T ss_pred EEEEEECCCCCC--------CCCHHHHHH---HH-HHHHHCCCCEEEEEEEEEE------EECCCCCCCCCHHHHHHHHH
T ss_conf 899866222456--------678899999---99-9999839978999334243------10589983570899999999
Q ss_pred HHHH
Q ss_conf 8999
Q gi|254780799|r 381 SDDI 384 (806)
Q Consensus 381 adDI 384 (806)
..+.
T Consensus 75 v~~~ 78 (417)
T d1vema2 75 VKNA 78 (417)
T ss_dssp HHHT
T ss_pred HHHC
T ss_conf 9986
No 378
>d1lfma_ a.3.1.1 (A:) Mitochondrial cytochrome c {Bluefin tuna (Thunnus thynnus) [TaxId: 8237]}
Probab=24.52 E-value=14 Score=12.97 Aligned_cols=18 Identities=22% Similarity=0.200 Sum_probs=14.2
Q ss_pred CCCHHHHHHHHHHHHHCC
Q ss_conf 489889999999997128
Q gi|254780799|r 696 FVSDIEVEKVVSHLKTQG 713 (806)
Q Consensus 696 ~v~~~ev~~v~~~~~~q~ 713 (806)
..||+|+..||.|+|+..
T Consensus 85 ~ls~~ei~dviAYLkt~s 102 (103)
T d1lfma_ 85 IKKKGERQDLVAYLKSAT 102 (103)
T ss_dssp CCSHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHC
T ss_conf 999999999999999863
No 379
>d1n57a_ c.23.16.2 (A:) HSP31 (HchA; YedU) {Escherichia coli [TaxId: 562]}
Probab=24.43 E-value=15 Score=12.96 Aligned_cols=37 Identities=8% Similarity=0.107 Sum_probs=22.0
Q ss_pred CCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 8754773689832588833489889999999997128974
Q gi|254780799|r 677 QGDMLYMTGGGRVQRIHGPFVSDIEVEKVVSHLKTQGEAK 716 (806)
Q Consensus 677 ~gdml~~~~~~~~~r~~g~~v~~~ev~~v~~~~~~q~~~~ 716 (806)
.=|++|+|||-.+.. -+-.|+++.+++.+.-++++|-
T Consensus 141 dYdav~iPGGhG~~~---dL~~~~~l~~ll~~~~~~gk~v 177 (279)
T d1n57a_ 141 EYAAIFVPGGHGALI---GLPESQDVAAALQWAIKNDRFV 177 (279)
T ss_dssp SEEEEEECCSGGGGS---SGGGCHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECCCCCCHH---HHHHHHHHHHHHHHHHHCCCCC
T ss_conf 252899558864033---4167889999999999739950
No 380
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.42 E-value=10 Score=14.18 Aligned_cols=17 Identities=24% Similarity=0.550 Sum_probs=9.8
Q ss_pred EEEECCCCHHHHHHHHH
Q ss_conf 55304774067999999
Q gi|254780799|r 458 LIAGTTGSGKSVAINTM 474 (806)
Q Consensus 458 LIAGtTGSGKSV~iN~i 474 (806)
++-|..|||||.-=+.+
T Consensus 23 ~L~G~pGSGKTTiAk~L 39 (195)
T d1x6va3 23 WLTGLSGAGKTTVSMAL 39 (195)
T ss_dssp EEESSCHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHH
T ss_conf 98899999999999999
No 381
>d2gtaa1 a.204.1.2 (A:1-98) Hypothetical protein YpjD {Bacillus subtilis [TaxId: 1423]}
Probab=24.25 E-value=11 Score=13.72 Aligned_cols=11 Identities=27% Similarity=0.682 Sum_probs=7.9
Q ss_pred EHHHHHHHHHH
Q ss_conf 63446888873
Q gi|254780799|r 595 VIDEMADLMMV 605 (806)
Q Consensus 595 iiDElaDlmm~ 605 (806)
+-|||||.|+.
T Consensus 63 l~~ElaDVl~y 73 (98)
T d2gtaa1 63 MEEEIGDVLFV 73 (98)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 99999899999
No 382
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=24.11 E-value=15 Score=12.92 Aligned_cols=42 Identities=29% Similarity=0.480 Sum_probs=27.0
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCC---HHHEEEEEECCCHH
Q ss_conf 2355304774067999999999998299---57847888523100
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYRMT---PAQCRLIMIDPKML 497 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk~~---P~evkliliDPK~v 497 (806)
.-++|=..|.||++..=+.+.+++.+.. |.--+.+.|-|+-+
T Consensus 81 g~iLaDemGlGKT~qaia~l~~l~~~~~~~~~~~~~~LIV~P~sl 125 (298)
T d1z3ix2 81 GCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPSSL 125 (298)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHHHHCCTTSSCSCSCEEEEECHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHH
T ss_conf 469874787889999999999999846011688773799805045
No 383
>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}
Probab=24.02 E-value=15 Score=12.90 Aligned_cols=76 Identities=18% Similarity=0.225 Sum_probs=38.8
Q ss_pred HHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCEEEEEECCCCCCHHHCCCCCHHHHCCCCCEEEECCCCCEEEEEECCCC
Q ss_conf 86641423799996577753554355411025158764586642123388645786588754773689832588833489
Q gi|254780799|r 619 QMARASGIHVIMATQRPSVDVITGTIKANFPTRISFQVSSKIDSRTILGEQGAEQLLGQGDMLYMTGGGRVQRIHGPFVS 698 (806)
Q Consensus 619 q~ara~GiHli~aTqrPsvdvitg~ikan~p~riaf~v~s~~dSrtild~~gae~Llg~gdml~~~~~~~~~r~~g~~v~ 698 (806)
|..|..||.+++||-|+-..+.-=+-+-+++. ..+.+...+|| ..|-+..++ .+.-...+
T Consensus 31 ~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~----------~~~~~i~~nGa--------~i~~~~~~~--~i~~~~~~ 90 (271)
T d1rkqa_ 31 AAARARGVNVVLTTGRPYAGVHNYLKELHMEQ----------PGDYCITYNGA--------LVQKAADGS--TVAQTALS 90 (271)
T ss_dssp HHHHHTTCEEEEECSSCGGGTHHHHHHTTCCS----------TTCEEEEGGGT--------EEEETTTCC--EEEECCBC
T ss_pred HHHHHCCCEEEEECCCCHHHHHHHHHHHCCCC----------CCCEEEECCCE--------EEECCCCCE--EEEEECCC
T ss_conf 99997899999998999899999999846768----------98589986851--------675067770--89850200
Q ss_pred HHHHHHHHHHHHHCCC
Q ss_conf 8899999999971289
Q gi|254780799|r 699 DIEVEKVVSHLKTQGE 714 (806)
Q Consensus 699 ~~ev~~v~~~~~~q~~ 714 (806)
.+++..+.+.++..+.
T Consensus 91 ~~~~~~i~~~~~~~~~ 106 (271)
T d1rkqa_ 91 YDDYRFLEKLSREVGS 106 (271)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 7788887888886164
No 384
>d2cuja1 a.4.1.18 (A:8-108) Transcriptional adaptor 2-like, TADA2L {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.86 E-value=15 Score=12.88 Aligned_cols=36 Identities=17% Similarity=0.233 Sum_probs=27.8
Q ss_pred CCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHH
Q ss_conf 598500014222001177899999999977986802
Q gi|254780799|r 753 DNKASISYIQRRLGIGYNRAASIIENMEEKGVIGPA 788 (806)
Q Consensus 753 ~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~~ 788 (806)
.+.-..+--|+-++|-=|++.||.|-|++.|.|+.+
T Consensus 66 ~g~l~k~da~~~~kiD~~K~~rIydfl~~~GWi~~~ 101 (101)
T d2cuja1 66 QGGLRLAQARALIKIDVNKTRKIYDFLIREGYITKA 101 (101)
T ss_dssp SSCCCHHHHHHHHTSCHHHHHHHHHHHHTTTSSCCC
T ss_pred CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 599869999887255678899999999986685069
No 385
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]}
Probab=23.73 E-value=15 Score=12.87 Aligned_cols=24 Identities=29% Similarity=0.253 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 665457899999974248632899
Q gi|254780799|r 330 KVMQNNACTLKSVLSDFGIQGEIV 353 (806)
Q Consensus 330 eeL~~nA~lLE~tL~dFGVe~~Vv 353 (806)
+.+.+-.+.+.+.++++|+.....
T Consensus 107 ~~~~~~~~~v~~~~k~~~~~~~~~ 130 (332)
T d1hjsa_ 107 WKLYNYTLDAANKLQNAGIQPTIV 130 (332)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSEE
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 999999999999998538731476
No 386
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=23.54 E-value=15 Score=12.84 Aligned_cols=18 Identities=22% Similarity=0.612 Sum_probs=14.0
Q ss_pred EEEEECCCCHHHHHHHHH
Q ss_conf 355304774067999999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINTM 474 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~i 474 (806)
..+.|..|||||--++.+
T Consensus 5 ivl~GpsG~GK~tl~~~L 22 (182)
T d1znwa1 5 VVLSGPSAVGKSTVVRCL 22 (182)
T ss_dssp EEEECSTTSSHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHH
T ss_conf 999899999999999999
No 387
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=23.45 E-value=15 Score=12.83 Aligned_cols=27 Identities=15% Similarity=-0.049 Sum_probs=22.0
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHH
Q ss_conf 002023553047740679999999999
Q gi|254780799|r 452 ARMPHLLIAGTTGSGKSVAINTMILSL 478 (806)
Q Consensus 452 akMPHLLIAGtTGSGKSV~iN~iI~Sl 478 (806)
...||+|+-|--|+||+--...+.-.+
T Consensus 13 ~~~~~~l~~G~~g~gk~~~a~~l~~~i 39 (198)
T d2gnoa2 13 SEGISILINGEDLSYPREVSLELPEYV 39 (198)
T ss_dssp CSSEEEEEECSSSSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 998559988989988899999999998
No 388
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=23.31 E-value=15 Score=12.81 Aligned_cols=39 Identities=10% Similarity=0.164 Sum_probs=27.8
Q ss_pred CCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEE
Q ss_conf 23469868776344688887321005889999998664142379999
Q gi|254780799|r 585 DFQHMPYIVVVIDEMADLMMVARKDIESAVQRLAQMARASGIHVIMA 631 (806)
Q Consensus 585 ~~~~lp~ivviiDElaDlmm~~~~~ve~~i~rlaq~ara~GiHli~a 631 (806)
.+...=++++||| |...++..-.++.++++..|+-.|++
T Consensus 90 ~~~~~D~~ilVvd--------a~~g~~~~~~~~~~~~~~~~~p~iiv 128 (227)
T d1g7sa4 90 GGALADLAILIVD--------INEGFKPQTQEALNILRMYRTPFVVA 128 (227)
T ss_dssp SSBSCSEEEEEEE--------TTTCCCHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCEEEEEEE--------CCCCCCCCHHHHHHHHHCCCCEEEEE
T ss_conf 0124645899986--------12376320257777764379759999
No 389
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=23.26 E-value=15 Score=12.80 Aligned_cols=50 Identities=28% Similarity=0.246 Sum_probs=38.4
Q ss_pred CHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCE-----EEEEECCCCCC
Q ss_conf 00588999999866414237999965777535543554110251-----58764586642
Q gi|254780799|r 608 KDIESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKANFPTR-----ISFQVSSKIDS 662 (806)
Q Consensus 608 ~~ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ikan~p~r-----iaf~v~s~~dS 662 (806)
-+|-..-.++-+++|.+|.-.|+|||-+. -+|+...||| ||++|-.++|.
T Consensus 190 e~vp~~Qk~Ii~~~~~~~kpvivAt~~le-----SMi~~~~pTRaEv~Dianav~~G~D~ 244 (282)
T d2g50a2 190 EKVFLAQKMIIGRCNRAGKPVICATQMLE-----SMIKKPRPTRAEGSDVANAVLDGADC 244 (282)
T ss_dssp GGHHHHHHHHHHHHHHHTCCEEEESSTTG-----GGGTCSSCCHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEECCCCC-----CCCCCCCCCHHHHHHHHHHHHHCCCE
T ss_conf 77678999999999855993798546546-----55569999789999999999948988
No 390
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=23.22 E-value=15 Score=12.93 Aligned_cols=17 Identities=35% Similarity=0.544 Sum_probs=13.4
Q ss_pred EEEEECCCCHHHHHHHH
Q ss_conf 35530477406799999
Q gi|254780799|r 457 LLIAGTTGSGKSVAINT 473 (806)
Q Consensus 457 LLIAGtTGSGKSV~iN~ 473 (806)
.||-|-.+||||-.--.
T Consensus 2 iLVtGGarSGKS~~AE~ 18 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEA 18 (180)
T ss_dssp EEEEECTTSSHHHHHHH
T ss_pred EEEECCCCCCHHHHHHH
T ss_conf 89978987659999999
No 391
>d1hw1a1 a.4.5.6 (A:5-78) Fatty acid responsive transcription factor FadR, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=23.02 E-value=15 Score=12.77 Aligned_cols=36 Identities=6% Similarity=0.171 Sum_probs=29.8
Q ss_pred EEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCC
Q ss_conf 000142220011778999999999779868022788
Q gi|254780799|r 757 SISYIQRRLGIGYNRAASIIENMEEKGVIGPASSTG 792 (806)
Q Consensus 757 s~s~lqr~~~igy~raar~~~~~e~~giv~~~~g~~ 792 (806)
|..-|.++|.+.-+-+-+-+++|+++|+|--..|.|
T Consensus 29 s~~eLa~~~~vSr~tvr~Al~~L~~~G~i~~~~g~G 64 (74)
T d1hw1a1 29 AERELSELIGVTRTTLREVLQRLARDGWLTIQHGKP 64 (74)
T ss_dssp CHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEE
T ss_pred CHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCE
T ss_conf 499999998979899999999999889189980844
No 392
>d2hs5a1 a.4.5.6 (A:25-93) Putative transcriptional regulator RHA1_ro03477 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=22.48 E-value=16 Score=12.70 Aligned_cols=36 Identities=17% Similarity=0.172 Sum_probs=25.1
Q ss_pred EEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCC
Q ss_conf 000142220011778999999999779868022788
Q gi|254780799|r 757 SISYIQRRLGIGYNRAASIIENMEEKGVIGPASSTG 792 (806)
Q Consensus 757 s~s~lqr~~~igy~raar~~~~~e~~giv~~~~g~~ 792 (806)
+..-|.++|.++.+-.-+-+.+||++|+|--..|+|
T Consensus 27 ~~~~La~~~~vSr~tvr~Al~~L~~~Gli~~~~~~G 62 (69)
T d2hs5a1 27 SEPDICAALDVSRNTVREAFQILIEDRLVAHELNRG 62 (69)
T ss_dssp CHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTTE
T ss_pred CHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCE
T ss_conf 999999998979899999999999889689975977
No 393
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=22.48 E-value=16 Score=12.70 Aligned_cols=12 Identities=33% Similarity=0.631 Sum_probs=5.4
Q ss_pred EEECCCCHHHHH
Q ss_conf 530477406799
Q gi|254780799|r 459 IAGTTGSGKSVA 470 (806)
Q Consensus 459 IAGtTGSGKSV~ 470 (806)
|.|..|||||..
T Consensus 6 iTG~igSGKsTv 17 (241)
T d1deka_ 6 LSGVKRSGKDTT 17 (241)
T ss_dssp EECCTTSSHHHH
T ss_pred EECCCCCCHHHH
T ss_conf 979999889999
No 394
>d2hoea1 a.4.5.63 (A:10-71) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]}
Probab=22.47 E-value=16 Score=12.69 Aligned_cols=40 Identities=18% Similarity=0.301 Sum_probs=30.1
Q ss_pred HHHHHHCCCEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCH
Q ss_conf 99999659850001422200117789999999997798680
Q gi|254780799|r 747 VDIVLRDNKASISYIQRRLGIGYNRAASIIENMEEKGVIGP 787 (806)
Q Consensus 747 ~~~v~~~~~~s~s~lqr~~~igy~raar~~~~~e~~giv~~ 787 (806)
++.+.+ +-.|-+-|-+.+.+--.-..++++.|+++|+|-+
T Consensus 5 l~~i~~-~pisr~eLa~~~gls~~TVs~~v~~L~~~GlV~e 44 (62)
T d2hoea1 5 LKRIMK-SPVSRVELAEELGLTKTTVGEIAKIFLEKGIVVE 44 (62)
T ss_dssp HHHHHH-SCBCHHHHHHHHTCCHHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHH-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEE
T ss_conf 999997-8969999999989399999999999998898787
No 395
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=22.15 E-value=16 Score=12.65 Aligned_cols=21 Identities=24% Similarity=0.442 Sum_probs=17.9
Q ss_pred CEE--EEEECCCCHHHHHHHHHH
Q ss_conf 023--553047740679999999
Q gi|254780799|r 455 PHL--LIAGTTGSGKSVAINTMI 475 (806)
Q Consensus 455 PHL--LIAGtTGSGKSV~iN~iI 475 (806)
||+ -|.|--++|||--+|.|+
T Consensus 2 ~~ini~iiGhvd~GKSTL~~~Ll 24 (204)
T d2c78a3 2 PHVNVGTIGHVDHGKTTLTAALT 24 (204)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHH
T ss_pred CCEEEEEEECCCCCHHHHHHHHH
T ss_conf 97199999478984999999999
No 396
>d1vkya_ e.53.1.1 (A:) Queuosine biosynthesis protein queA {Thermotoga maritima [TaxId: 2336]}
Probab=21.79 E-value=15 Score=12.93 Aligned_cols=29 Identities=7% Similarity=-0.026 Sum_probs=13.5
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHCC
Q ss_conf 89832588833489889999999997128
Q gi|254780799|r 685 GGGRVQRIHGPFVSDIEVEKVVSHLKTQG 713 (806)
Q Consensus 685 ~~~~~~r~~g~~v~~~ev~~v~~~~~~q~ 713 (806)
|.|.+.-+=.||+..+.+.++-++--+++
T Consensus 291 PkStll~LvsAf~g~~~~~~~Y~~Ai~~~ 319 (332)
T d1vkya_ 291 PRSTLLMLVAAFAGKDFVMEAYREAVKRR 319 (332)
T ss_dssp TTCHHHHHHHHHHCHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHCCHHHHHHHHHHHHHCC
T ss_conf 81289999998579699999999999879
No 397
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=21.28 E-value=17 Score=12.53 Aligned_cols=51 Identities=29% Similarity=0.361 Sum_probs=28.8
Q ss_pred CCCHHHCCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECC
Q ss_conf 100021045666666785410020235530477406799999999999829957847888523
Q gi|254780799|r 432 CDLAINLGKSIEGKPIIADLARMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDP 494 (806)
Q Consensus 432 ~~L~iaLGKdI~G~pvv~DLakMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDP 494 (806)
..|-.+|| + | -+.+-==..++|..|||||-..-.++.. +--..-+-+.||-
T Consensus 46 ~~lD~~lg--~-g-----G~~~g~i~e~~G~~~~GKT~l~l~~~~~----~q~~g~~~vyIDt 96 (269)
T d1mo6a1 46 IALDVALG--I-G-----GLPRGRVIEIYGPESSGKTTVALHAVAN----AQAAGGVAAFIDA 96 (269)
T ss_dssp HHHHHHTS--S-S-----SBCSSSEEEEECSSSSSHHHHHHHHHHH----HHHTTCEEEEEES
T ss_pred HHHHHHHC--C-C-----CCCCCEEEEEECCCCCHHHHHHHHHHHH----HHCCCCEEEEEEC
T ss_conf 88987556--6-9-----8666336999648874889999999998----7548988999989
No 398
>d1rk8c_ b.72.3.1 (C:) Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=21.26 E-value=10 Score=14.17 Aligned_cols=10 Identities=50% Similarity=0.717 Sum_probs=6.7
Q ss_pred EEEEEECCCC
Q ss_conf 7999965777
Q gi|254780799|r 627 HVIMATQRPS 636 (806)
Q Consensus 627 Hli~aTqrPs 636 (806)
..|-|||||.
T Consensus 9 ~~i~atqRpD 18 (33)
T d1rk8c_ 9 KFIPATKRPD 18 (33)
T ss_dssp EEECCEECTT
T ss_pred CEECCCCCCC
T ss_conf 6863322798
No 399
>d1ulya_ a.4.5.58 (A:) Hypothetical protein PH1932 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=21.17 E-value=17 Score=12.51 Aligned_cols=13 Identities=31% Similarity=0.593 Sum_probs=5.2
Q ss_pred CCCCHHHHHHHHHH
Q ss_conf 33430456689999
Q gi|254780799|r 512 VVTNPQKAVTVLKW 525 (806)
Q Consensus 512 VvTd~~kA~~aL~w 525 (806)
||||| +...||..
T Consensus 6 ~~~d~-~~~~~l~~ 18 (190)
T d1ulya_ 6 VITDP-EVIKVMLE 18 (190)
T ss_dssp EECCH-HHHHHHHS
T ss_pred ECCHH-HHHHHHCC
T ss_conf 06889-99999399
No 400
>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}
Probab=21.05 E-value=17 Score=12.49 Aligned_cols=15 Identities=20% Similarity=0.428 Sum_probs=7.2
Q ss_pred HHCCEEEEEEECCCC
Q ss_conf 414237999965777
Q gi|254780799|r 622 RASGIHVIMATQRPS 636 (806)
Q Consensus 622 ra~GiHli~aTqrPs 636 (806)
|..||++++||=||-
T Consensus 33 ~~~gi~~~i~TGR~~ 47 (269)
T d1rlma_ 33 KKRGIKFVVASGNQY 47 (269)
T ss_dssp HHHTCEEEEECSSCH
T ss_pred HHCCCEEEEECCCCH
T ss_conf 978998999959998
No 401
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=20.99 E-value=8.4 Score=14.74 Aligned_cols=24 Identities=21% Similarity=0.304 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHCCCCC-CCCCC
Q ss_conf 9978899998863001210-00388
Q gi|254780799|r 377 IIGLSDDIARSMSAISARV-AVIPR 400 (806)
Q Consensus 377 I~nLadDIA~aLsa~svRI-apIPG 400 (806)
+.+|.+-+|+-++-..||| +.-||
T Consensus 166 l~~lt~~lA~el~~~gIrVN~I~PG 190 (255)
T d1fmca_ 166 ASHLVRNMAFDLGEKNIRVNGIAPG 190 (255)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCCEEEEEEEEC
T ss_conf 9999999999968268289996018
No 402
>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}
Probab=20.51 E-value=17 Score=12.41 Aligned_cols=26 Identities=12% Similarity=0.197 Sum_probs=20.3
Q ss_pred CCEEEEE-ECCCCHHHHHHHHHHHHHC
Q ss_conf 8325888-3348988999999999712
Q gi|254780799|r 687 GRVQRIH-GPFVSDIEVEKVVSHLKTQ 712 (806)
Q Consensus 687 ~~~~r~~-g~~v~~~ev~~v~~~~~~q 712 (806)
..-.|+- +.+++++||+++++.+|.-
T Consensus 318 ~~~lR~~~~~~~T~edid~~le~lr~a 344 (345)
T d1v72a1 318 PNVVRFVTSFATTAEDVDHLLNQVRLA 344 (345)
T ss_dssp TTEEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 997999899999899999999999975
No 403
>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}
Probab=20.32 E-value=17 Score=12.39 Aligned_cols=32 Identities=19% Similarity=0.328 Sum_probs=23.1
Q ss_pred CCEEEEE--ECCCCHHHHHHHHHHHHHC---CCCCCC
Q ss_conf 8325888--3348988999999999712---897421
Q gi|254780799|r 687 GRVQRIH--GPFVSDIEVEKVVSHLKTQ---GEAKYI 718 (806)
Q Consensus 687 ~~~~r~~--g~~v~~~ev~~v~~~~~~q---~~~~y~ 718 (806)
++..||= |.|-+.++|+++++.+|+- ..|+|.
T Consensus 351 ~~~~RIs~~g~~~t~edI~~ll~alke~L~~~~~~~~ 387 (388)
T d2ch1a1 351 GKAWRVGIMGECSTVQKIQFYLYGFKESLKATHPDYI 387 (388)
T ss_dssp TTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 9889971771789999999999999999996198658
No 404
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]}
Probab=20.22 E-value=8.4 Score=14.75 Aligned_cols=137 Identities=18% Similarity=0.249 Sum_probs=71.9
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEECCCCCHH----HHHHHHHHHHHHHHHCCCCC-CCCCCCC
Q ss_conf 256654578999999742486328998410442444443214786399----99978899998863001210-0038861
Q gi|254780799|r 328 SPKVMQNNACTLKSVLSDFGIQGEIVNVRPGPVITLYELEPAPGIKSS----RIIGLSDDIARSMSAISARV-AVIPRRN 402 (806)
Q Consensus 328 s~eeL~~nA~lLE~tL~dFGVe~~Vv~v~pGPVVTrYEi~PApGVKvS----KI~nLadDIA~aLsa~svRI-apIPGK~ 402 (806)
|.++|++-+++|.+ .-=|+ |--..|++.+ .+..|++.+ .+.| ....||+
T Consensus 5 ~~~~l~~a~~~L~~--------------A~rPv-----ii~G~g~~~~~a~~~l~~lae~~-------~iPv~~t~~~~g 58 (175)
T d2ji7a1 5 AEDAIARAADLIKN--------------AKRPV-----IMLGKGAAYAQCDDEIRALVEET-------GIPFLPMGMAKG 58 (175)
T ss_dssp CHHHHHHHHHHHHT--------------CSSCE-----EEECHHHHHTTCHHHHHHHHHHH-------TCCEEECTTTBT
T ss_pred CHHHHHHHHHHHHH--------------CCCEE-----EEECCCCCCCCCHHHHHHHHHHC-------EEEEECCCCCCC
T ss_conf 99999999999984--------------89989-----99887924110279999976530-------410212342235
Q ss_pred EEEEEECCCCCCEEEEHHHCCCHHHHHCCCCCHHHCCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC
Q ss_conf 25553024566238734230721343022100021045666666785410020235530477406799999999999829
Q gi|254780799|r 403 AIGIELPNDIRETVMLRDLIVSRVFEKNQCDLAINLGKSIEGKPIIADLARMPHLLIAGTTGSGKSVAINTMILSLLYRM 482 (806)
Q Consensus 403 ~VGIEiPN~~r~~V~lreil~s~~f~~s~~~L~iaLGKdI~G~pvv~DLakMPHLLIAGtTGSGKSV~iN~iI~SlLyk~ 482 (806)
. +|+.+...+.. ...... .++-|-+++|.+.+. ++.-|++ ...
T Consensus 59 ~----~~~~h~~~~~~---~~~~~l--~~aDlii~vG~~~~~-----------------~~~~~~~-----------~~~ 101 (175)
T d2ji7a1 59 L----LPDNHPQSAAA---TRAFAL--AQCDVCVLIGARLNW-----------------LMQHGKG-----------KTW 101 (175)
T ss_dssp T----BCTTCTTBCGG---GHHHHH--HHCSEEEEESCCSSG-----------------GGGGGCS-----------GGG
T ss_pred C----CCCCCCCCCCC---CCCCEE--ECCCCEEEEECCCCC-----------------CCCCCCC-----------CCC
T ss_conf 6----88754332221---101123--112310135125783-----------------1123556-----------445
Q ss_pred CHHHEEEEEECCCHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 957847888523100111027703431223343045668999999999
Q gi|254780799|r 483 TPAQCRLIMIDPKMLELSVYDGIPNLLTPVVTNPQKAVTVLKWLVCEM 530 (806)
Q Consensus 483 ~P~evkliliDPK~vEls~Y~~iPHLl~pVvTd~~kA~~aL~w~V~EM 530 (806)
.|+..|+|-||+--=|++-. -+.-.+|+-|++....+|...+...
T Consensus 102 ~~~~~kvI~Id~d~~~i~~~---~~~~l~i~~D~~~~l~~L~~~l~~~ 146 (175)
T d2ji7a1 102 GDELKKYVQIDIQANEMDSN---QPIAAPVVGDIKSAVSLLRKALKGA 146 (175)
T ss_dssp TTSCCEEEEEESCGGGTTSS---SCCSEEEESCHHHHHHHHHHHTTTC
T ss_pred CCCCCEEEEEECCCHHHCCC---CCCCCEEEECHHHHHHHHHHHHCCC
T ss_conf 78664389971061332465---6767527874999999999972058
No 405
>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}
Probab=20.05 E-value=18 Score=12.35 Aligned_cols=26 Identities=23% Similarity=0.270 Sum_probs=21.2
Q ss_pred CCCEEEEE-ECCCCHHHHHHHHHHHHH
Q ss_conf 98325888-334898899999999971
Q gi|254780799|r 686 GGRVQRIH-GPFVSDIEVEKVVSHLKT 711 (806)
Q Consensus 686 ~~~~~r~~-g~~v~~~ev~~v~~~~~~ 711 (806)
+..-.|+- +.+.+++||++.++.+|+
T Consensus 313 ~~~~vR~s~~~~~t~edid~~l~~l~~ 339 (340)
T d1svva_ 313 GTCIMRLCTSWATEEKECHRFVEVLKR 339 (340)
T ss_dssp TEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 996799988998999999999999845
Done!