HHsearch alignment for GI: 254780801 and conserved domain: COG3457
>COG3457 Predicted amino acid racemase [Amino acid transport and metabolism].
Probab=99.23 E-value=1.4e-10 Score=92.57 Aligned_cols=204 Identities=21% Similarity=0.258 Sum_probs=143.2
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHCEEEEECCCC--CHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCC
Q ss_conf 99999999999999819896441899871899--9999999997298100012100011110000012587302302443
Q gi|254780801|r 6 KLQVFKQKIENSAILAKRPKDSVSLVAVSKMV--DSKKIRVALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQ 83 (222)
Q Consensus 6 nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~--~~e~I~~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQ 83 (222)
T Consensus 9 dl~~ieeNak~~~~~a~~--~gI~~~~vtK~~~g~~~iae~l~~~Gi~~iaesr~~n~~~lr~~---g~~~~~~Llr~P~ 83 (353)
T COG3457 9 DLDKIEENAKVLQETAAR--YGIELYGVTKQFGGDPFIAEALLALGIEGIAESRIDNAIRLREA---GCTIPGHLLRSPC 83 (353)
T ss_pred EHHHHHHHHHHHHHHHHH--CCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHC---CCCCCCEEEECCC
T ss_conf 689988768999999987--39779998752058818999999658543430227889999975---9996754762652
Q ss_pred CCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCC---CHHHHHHHHHHCCCCCCHHHH
Q ss_conf 20013201110000122222001344333333114303688970046656346570---001222344310431100111
Q gi|254780801|r 84 SNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMP---NQTKDFVILCRQKYQLNVEGL 160 (222)
Q Consensus 84 sNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p---~el~~l~~~i~~~~~L~i~GL 160 (222)
T Consensus 84 ~sei~~vv~~~Dvs-~~sel~~arqlse~A~~~Gk~h~VlLmVd~~D--lreG~~~~~~~~l~~~V~eI~~lkGi~~vGl 160 (353)
T COG3457 84 MSEIEDVVRKVDVS-TVSELDTARQLSEAAVRMGKVHDVLLMVDYGD--LREGQWGFLIEDLEETVEEIQQLKGIHLVGL 160 (353)
T ss_pred HHHHHHHHHHCCEE-EEECHHHHHHHHHHHHHHCCCEEEEEEEECCC--CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 88999998735768-97258999999999998275216999998356--6674024478888999999966998359863
Q ss_pred ----EECCCCCCCCHHHHHHHHHHHHHC------CCCEECCCCCHHHHH---HHHHCCCEEEECHHHCCCC
Q ss_conf ----011543345205899999998875------894722477734899---9980898899711323899
Q gi|254780801|r 161 ----MCIPPAMGNPKPHFYLLSEIAREC------KLTKLSMGMTRDFEL---AIASGATSVRIGSGIFGER 218 (222)
Q Consensus 161 ----Mti~p~~~d~~~~F~~l~~l~~~~------~~~~LSmGMS~D~~~---Ai~~Gst~vRiGs~iFG~R 218 (222)
T Consensus 161 gTnF~Cfg~v~PTp-~n~~~ll~~~~~lE~~~Gi~l~~vsagnats~~~L~~~~~~~inhlriG~al~~g~ 230 (353)
T COG3457 161 GTNFPCFGDVLPTP-ENLESLLQGKKKLEASSGIQLKQVSAGNATSLTLLPMGSLPGINHLRIGEALTGGV 230 (353)
T ss_pred ECCCCCCCCCCCCC-CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCEEECCC
T ss_conf 11665456767884-04899999999987732950588127986203320145522555544452145361