HHsearch alignment for GI: 254780801 and conserved domain: PRK11165

>PRK11165 diaminopimelate decarboxylase; Provisional.
Probab=97.15  E-value=0.0036  Score=42.64  Aligned_cols=131  Identities=15%  Similarity=0.116  Sum_probs=77.1

Q ss_pred             EEEECCCCCHHHHHHH-HHCCCCCCCCCCCHHHHHH-HHCCCC-CCCCCEEEECCCCCCH-HHHHCCCCHHCCCCCCCCH
Q ss_conf             9987189999999999-9729810001210001111-000001-2587302302443200-1320111000012222200
Q gi|254780801|r   30 LVAVSKMVDSKKIRVA-LSCGQVIFAENKLQEAKKK-WIPLRK-EWDVQLRFIGSLQSNK-VSEIVSLFDVIETVSREKT  105 (222)
Q Consensus        30 LiaVtK~~~~e~I~~~-~~~G~~~fGENrvQE~~~K-~~~l~~-~~~i~wHfIG~LQsNK-vk~i~~~~~~Ihsvds~~~  105 (222)
T Consensus        41 i~YAvKAN~~~~il~~l~~~G~g-~DvaS~gEl~~al~aG~~~~~~~~~Iif~g~~k~~~~l~~a~~~gv~i-n~ds~~e  118 (412)
T PRK11165         41 IRFAQKACSNIHILRLMREQGVK-VDAVSLGEIERALAAGYSPGTEPDDIVFTADLIDRATLARVSELKIPV-NAGSIDM  118 (412)
T ss_pred             EEEEHHHCCCHHHHHHHHHCCCC-EEEECHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCEE-ECCCHHH
T ss_conf             48862648889999999984996-688799999999975999899855238778657999999999849978-2287899


Q ss_pred             HHHHHHHHHHHCCCEEEEEEEE------------CCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEE-CCCCC
Q ss_conf             1344333333114303688970------------04665634657000122234431043110011101-15433
Q gi|254780801|r  106 ASLLSLEMIKQSRFLPVYIQVN------------TGYEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMC-IPPAM  167 (222)
Q Consensus       106 a~~L~~~~~~~~~~~~vliQVN------------~~~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMt-i~p~~  167 (222)
T Consensus       119 L~~i~~~~----~~~~V~lRiNP~~~~~~~~~~~tg~~~sKFGi~~~~~~~~~~~~~~~-~l~~~GlH~HiGS~i  188 (412)
T PRK11165        119 LDQLGQVS----PGHRVWLRINPGFGHGHSQKTNTGGENSKHGIWHEDLPAALAVIQRY-GLKLVGIHMHIGSGV  188 (412)
T ss_pred             HHHHHHHC----CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCCEEEEEEECCCCC
T ss_conf             99998646----68846999568868776643346887555678999999999999867-997898889538887