HHsearch alignment for GI: 254780801 and conserved domain: PRK11165
>PRK11165 diaminopimelate decarboxylase; Provisional.
Probab=97.15 E-value=0.0036 Score=42.64 Aligned_cols=131 Identities=15% Similarity=0.116 Sum_probs=77.1
Q ss_pred EEEECCCCCHHHHHHH-HHCCCCCCCCCCCHHHHHH-HHCCCC-CCCCCEEEECCCCCCH-HHHHCCCCHHCCCCCCCCH
Q ss_conf 9987189999999999-9729810001210001111-000001-2587302302443200-1320111000012222200
Q gi|254780801|r 30 LVAVSKMVDSKKIRVA-LSCGQVIFAENKLQEAKKK-WIPLRK-EWDVQLRFIGSLQSNK-VSEIVSLFDVIETVSREKT 105 (222)
Q Consensus 30 LiaVtK~~~~e~I~~~-~~~G~~~fGENrvQE~~~K-~~~l~~-~~~i~wHfIG~LQsNK-vk~i~~~~~~Ihsvds~~~ 105 (222)
T Consensus 41 i~YAvKAN~~~~il~~l~~~G~g-~DvaS~gEl~~al~aG~~~~~~~~~Iif~g~~k~~~~l~~a~~~gv~i-n~ds~~e 118 (412)
T PRK11165 41 IRFAQKACSNIHILRLMREQGVK-VDAVSLGEIERALAAGYSPGTEPDDIVFTADLIDRATLARVSELKIPV-NAGSIDM 118 (412)
T ss_pred EEEEHHHCCCHHHHHHHHHCCCC-EEEECHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCEE-ECCCHHH
T ss_conf 48862648889999999984996-688799999999975999899855238778657999999999849978-2287899
Q ss_pred HHHHHHHHHHHCCCEEEEEEEE------------CCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEE-CCCCC
Q ss_conf 1344333333114303688970------------04665634657000122234431043110011101-15433
Q gi|254780801|r 106 ASLLSLEMIKQSRFLPVYIQVN------------TGYEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMC-IPPAM 167 (222)
Q Consensus 106 a~~L~~~~~~~~~~~~vliQVN------------~~~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMt-i~p~~ 167 (222)
T Consensus 119 L~~i~~~~----~~~~V~lRiNP~~~~~~~~~~~tg~~~sKFGi~~~~~~~~~~~~~~~-~l~~~GlH~HiGS~i 188 (412)
T PRK11165 119 LDQLGQVS----PGHRVWLRINPGFGHGHSQKTNTGGENSKHGIWHEDLPAALAVIQRY-GLKLVGIHMHIGSGV 188 (412)
T ss_pred HHHHHHHC----CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCCEEEEEEECCCCC
T ss_conf 99998646----68846999568868776643346887555678999999999999867-997898889538887