HHsearch alignment for GI: 254780801 and conserved domain: cd06829
>cd06829 PLPDE_III_CANSDC Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Carboxynorspermidine Decarboxylase. Carboxynorspermidine decarboxylase (CANSDC) catalyzes the decarboxylation of carboxynorspermidine, the last step in the biosynthesis of norspermidine. It is homologous to eukaryotic ornithine decarboxylase (ODC) and diaminopimelate decarboxylase (DapDC), which are fold type III PLP-dependent enzymes that contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. Based on this similarity, CANSDC may require homodimer formation and the presence of the PLP cofactor for its catalytic activity.
Probab=96.85 E-value=0.027 Score=36.79 Aligned_cols=111 Identities=12% Similarity=0.077 Sum_probs=66.3
Q ss_pred HHCEEEEECCCCCHHHHHHHHHC---CCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCC-CHHHHHCCCCHHCCCCC
Q ss_conf 44189987189999999999972---981000121000111100000125873023024432-00132011100001222
Q gi|254780801|r 26 DSVSLVAVSKMVDSKKIRVALSC---GQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQS-NKVSEIVSLFDVIETVS 101 (222)
Q Consensus 26 ~~v~LiaVtK~~~~e~I~~~~~~---G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQs-NKvk~i~~~~~~Ihsvd 101 (222)
T Consensus 25 ~~~~i~YA~KAN~~~~il~~l~~~g~G~d~~S---~~E~~la~~~~~~--~--~~~~~~~~~~~el~~~~~~~~~i-~~d 96 (346)
T cd06829 25 SGAKILLALKAFSMWSVFPLIREYLDGTTASS---LFEARLGREEFGG--E--VHTYSPAYRDDEIDEILRLADHI-IFN 96 (346)
T ss_pred CCCEEEEEEHHCCCHHHHHHHHHHCCEEEECC---HHHHHHHHHHCCC--C--CEEECCCCCHHHHHHHHHCCCEE-EEC
T ss_conf 89879998824288899999997499699749---9999997410687--6--46756879989999999729989-988
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEEEEECC------------CCCCCCCCCCCHHHHHH
Q ss_conf 2200134433333311430368897004------------66563465700012223
Q gi|254780801|r 102 REKTASLLSLEMIKQSRFLPVYIQVNTG------------YEIQKSGIMPNQTKDFV 146 (222)
Q Consensus 102 s~~~a~~L~~~~~~~~~~~~vliQVN~~------------~e~~K~G~~p~el~~l~ 146 (222)
T Consensus 97 s~~El~~i~~~~~~--~~~~V~lRINP~~~~~~~~~~~tg~~~sKFGi~~~~~~~~~ 151 (346)
T cd06829 97 SLSQLERFKDRAKA--AGISVGLRINPEYSEVETDLYDPCAPGSRLGVTLDELEEED 151 (346)
T ss_pred CHHHHHHHHHHHCC--CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99999999987405--89749999858987776766057898440378799987877