HHsearch alignment of GI: 254780801 and MMDB domain: 2vd8_A_19-239
>2vd8_A (A:19-239) Alanine racemase; pyridoxal 5'-phosphate, peptidoglycan synthesis, PLP, OPPF, L-alanine, isomerase, D- alanine, pyridoxal phosphate; HET: MLY LLP; 1.47A {Bacillus anthracis} PDB: 2vd9_A*
Probab=99.97 E-value=1.5e-30 Score=226.53 Aligned_cols=202 Identities=17% Similarity=0.120 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHCEEEEEC----CCCCHHHHH-HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEE
Q ss_conf 89999999999999999819896441899871----899999999-9997298100012100011110000012587302
Q gi|254780801|r 3 LGNKLQVFKQKIENSAILAKRPKDSVSLVAVS----KMVDSKKIR-VALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLR 77 (222)
Q Consensus 3 i~~nl~~i~~~I~~a~~~~gR~~~~v~LiaVt----K~~~~e~I~-~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wH 77 (222)
|..|++.+++++ ++.++++||+ |++....|. .++++|++.||++++||+..+..... +..||
T Consensus 3 l~~Ni~~i~~~~----------~~~~~~~avvK~~ayg~g~~~v~~~~~~~G~~~~~v~~~~Ea~~~~~~~~---~~~il 69 (221)
T 2vd8_A 3 IYNNVTHIXEFI----------PSDVEIFAVVXGNAYGHDYVPVAXIALEAGATRLAVAFLDEALVLRRAGI---TAPIL 69 (221)
T ss_dssp HHHHHHHHHHHS----------CTTCEEEEECHHHHHTTCHHHHHHHHHHTTCCEEEESSHHHHHHHHHTTC---CSCEE
T ss_pred HHHHHHHHHHHC----------CCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCC---CCCEE
T ss_conf 999999999747----------99987999993602658879999999987979999826999999997189---99868
Q ss_pred EECCCCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCC-HHHHHHHHHHCCCCCC
Q ss_conf 302443200132011100001222220013443333331143036889700466563465700-0122234431043110
Q gi|254780801|r 78 FIGSLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPN-QTKDFVILCRQKYQLN 156 (222)
Q Consensus 78 fIG~LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~-el~~l~~~i~~~~~L~ 156 (222)
++|++|+++++.++. .+++++|||.+.++.|++.+. .+++++|+|+|+++ .+|.||.|+ ++.+++..+..+++|+
T Consensus 70 ~~~~~~~~~~~~~~~-~~~~~~v~s~~~~~~l~~~a~-~~~~~~v~i~id~g--~~R~G~~~~~~~~~l~~~i~~~~~l~ 145 (221)
T 2vd8_A 70 VLGPSPPRDINVAAE-NDVALTVFQXEWVDEAIXLWD-GSSTMXYHINFDSG--MGRIGIRERXELXGFLXSLEGAPFLE 145 (221)
T ss_dssp ECSCCCGGGHHHHHH-TTEEEECCCHHHHHHHHHHCC-SSCCEEEEEEBCSS--CCSSSBCCHHHHHHHHHHHTTCTTEE
T ss_pred EECCCCHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHH-CCCCEEEEEEECCC--CCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 865888355444430-354231033889999999862-35541699984156--67778783899999999997589975
Q ss_pred HHHHEECCCCCCCC-----HHHHHHHHHHHHHC-----CCCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCCC
Q ss_conf 01110115433452-----05899999998875-----8947224777348999980898899711323899999
Q gi|254780801|r 157 VEGLMCIPPAMGNP-----KPHFYLLSEIAREC-----KLTKLSMGMTRDFELAIASGATSVRIGSGIFGERPCQ 221 (222)
Q Consensus 157 i~GLMti~p~~~d~-----~~~F~~l~~l~~~~-----~~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~~ 221 (222)
++|+||+.+...++ +..|..+.++.+.+ ....+|+|||.+|..+.++|+|+||+|++|||.||++
T Consensus 146 l~Gi~th~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~S~~~~~~~~~~~~~vR~G~~lyG~~p~~ 220 (221)
T 2vd8_A 146 LEGVYTHFATADEVETSYFDXQYNTFLEQLSWLXEFGVDPXFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSV 220 (221)
T ss_dssp EEEEECCCSSTTSSSCHHHHHHHHHHHHHHHHHHHTTCCCCSEECCCHHHHTTCTTCCTTEEEESTTTTTCCSCT
T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEHHHHHHHCCCCCCCCCCCCCCCEECCCCCC
T ss_conf 668776537565322156788999999999999860885010000102554348433565014574223367885