HHsearch alignment of GI: 254780801 and MMDB domain: 2vd8_A_19-239

>2vd8_A (A:19-239) Alanine racemase; pyridoxal 5'-phosphate, peptidoglycan synthesis, PLP, OPPF, L-alanine, isomerase, D- alanine, pyridoxal phosphate; HET: MLY LLP; 1.47A {Bacillus anthracis} PDB: 2vd9_A*
Probab=99.97  E-value=1.5e-30  Score=226.53  Aligned_cols=202  Identities=17%  Similarity=0.120  Sum_probs=172.5

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHCEEEEEC----CCCCHHHHH-HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEE
Q ss_conf             89999999999999999819896441899871----899999999-9997298100012100011110000012587302
Q gi|254780801|r    3 LGNKLQVFKQKIENSAILAKRPKDSVSLVAVS----KMVDSKKIR-VALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLR   77 (222)
Q Consensus         3 i~~nl~~i~~~I~~a~~~~gR~~~~v~LiaVt----K~~~~e~I~-~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wH   77 (222)
                      |..|++.+++++          ++.++++||+    |++....|. .++++|++.||++++||+..+.....   +..||
T Consensus         3 l~~Ni~~i~~~~----------~~~~~~~avvK~~ayg~g~~~v~~~~~~~G~~~~~v~~~~Ea~~~~~~~~---~~~il   69 (221)
T 2vd8_A            3 IYNNVTHIXEFI----------PSDVEIFAVVXGNAYGHDYVPVAXIALEAGATRLAVAFLDEALVLRRAGI---TAPIL   69 (221)
T ss_dssp             HHHHHHHHHHHS----------CTTCEEEEECHHHHHTTCHHHHHHHHHHTTCCEEEESSHHHHHHHHHTTC---CSCEE
T ss_pred             HHHHHHHHHHHC----------CCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCC---CCCEE
T ss_conf             999999999747----------99987999993602658879999999987979999826999999997189---99868


Q ss_pred             EECCCCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCC-HHHHHHHHHHCCCCCC
Q ss_conf             302443200132011100001222220013443333331143036889700466563465700-0122234431043110
Q gi|254780801|r   78 FIGSLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPN-QTKDFVILCRQKYQLN  156 (222)
Q Consensus        78 fIG~LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~-el~~l~~~i~~~~~L~  156 (222)
                      ++|++|+++++.++. .+++++|||.+.++.|++.+. .+++++|+|+|+++  .+|.||.|+ ++.+++..+..+++|+
T Consensus        70 ~~~~~~~~~~~~~~~-~~~~~~v~s~~~~~~l~~~a~-~~~~~~v~i~id~g--~~R~G~~~~~~~~~l~~~i~~~~~l~  145 (221)
T 2vd8_A           70 VLGPSPPRDINVAAE-NDVALTVFQXEWVDEAIXLWD-GSSTMXYHINFDSG--MGRIGIRERXELXGFLXSLEGAPFLE  145 (221)
T ss_dssp             ECSCCCGGGHHHHHH-TTEEEECCCHHHHHHHHHHCC-SSCCEEEEEEBCSS--CCSSSBCCHHHHHHHHHHHTTCTTEE
T ss_pred             EECCCCHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHH-CCCCEEEEEEECCC--CCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf             865888355444430-354231033889999999862-35541699984156--67778783899999999997589975


Q ss_pred             HHHHEECCCCCCCC-----HHHHHHHHHHHHHC-----CCCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCCC
Q ss_conf             01110115433452-----05899999998875-----8947224777348999980898899711323899999
Q gi|254780801|r  157 VEGLMCIPPAMGNP-----KPHFYLLSEIAREC-----KLTKLSMGMTRDFELAIASGATSVRIGSGIFGERPCQ  221 (222)
Q Consensus       157 i~GLMti~p~~~d~-----~~~F~~l~~l~~~~-----~~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~~  221 (222)
                      ++|+||+.+...++     +..|..+.++.+.+     ....+|+|||.+|..+.++|+|+||+|++|||.||++
T Consensus       146 l~Gi~th~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~S~~~~~~~~~~~~~vR~G~~lyG~~p~~  220 (221)
T 2vd8_A          146 LEGVYTHFATADEVETSYFDXQYNTFLEQLSWLXEFGVDPXFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSV  220 (221)
T ss_dssp             EEEEECCCSSTTSSSCHHHHHHHHHHHHHHHHHHHTTCCCCSEECCCHHHHTTCTTCCTTEEEESTTTTTCCSCT
T ss_pred             HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEHHHHHHHCCCCCCCCCCCCCCCEECCCCCC
T ss_conf             668776537565322156788999999999999860885010000102554348433565014574223367885