HHsearch alignment of GI: 254780801 and MMDB domain: 3cpg_A_

>3cpg_A (A:) Uncharacterized protein; unknown protein, TIM barrel, monomer, structural genomics, PSI-2, protein structure initiative; 1.71A {Bifidobacterium adolescentis ATCC15703}
Probab=99.96  E-value=9.8e-28  Score=207.48  Aligned_cols=219  Identities=29%  Similarity=0.377  Sum_probs=193.4

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC--------------
Q ss_conf             899999999999999998198964418998718999999999997298100012100011110000--------------
Q gi|254780801|r    3 LGNKLQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRVALSCGQVIFAENKLQEAKKKWIPL--------------   68 (222)
Q Consensus         3 i~~nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~~~~~G~~~fGENrvQE~~~K~~~l--------------   68 (222)
                      +..|++.++.+|...+.++|+.|..|.+++|+|++....+..+|.+|.+.|+++..++..-+....              
T Consensus        25 l~~nl~~~~~~i~~l~~~~g~~p~~v~~~~~iK~~~~~~~~~a~~~g~~~~a~k~~~~~~~~~~~~~~G~~~~~vs~~E~  104 (282)
T 3cpg_A           25 ITDGVHRVLDRIAAAEEQAGREAGSVRLLAATKTRDIGEIXAAIDAGVRXIGENRPQEVTAKAEGLARRCAERGFSLGVA  104 (282)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCTTSSEEEEECTTCCHHHHHHHHHTTCCCEEESCHHHHHHHHHHHHHHHHHTTEEECCC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             99999999999999999819990116999997898999999999869821110049999999997666432210000000


Q ss_pred             ----C-CCCCCCEEEECCCCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHH
Q ss_conf             ----0-12587302302443200132011100001222220013443333331143036889700466563465700012
Q gi|254780801|r   69 ----R-KEWDVQLRFIGSLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTK  143 (222)
Q Consensus        69 ----~-~~~~i~wHfIG~LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~  143 (222)
                          . ..++.+|||+|+.+++.+..++....++.+|||++.++.+.+.+.+.++.++++++||++...+|+|++++++.
T Consensus       105 ~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~vds~~~l~~l~~~~~~~~~~~~v~i~i~~~~~~~rfG~~~~~~~  184 (282)
T 3cpg_A          105 GAAPDAAAEHIPFHLIGQLQSNKIGKVLPVVDTIESVDSIDLAEKISRRAVARGITVGVLLEVNESGEESKSGCDPAHAI  184 (282)
T ss_dssp             ------CCEEECEEECSCCCGGGHHHHTTTCSEEEEECCHHHHHHHHHHHHHHTCCEEEEEEBCCSSCTTSSSBCGGGHH
T ss_pred             CCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHH
T ss_conf             00123457605760477466789999987458065569899999999999976998538999804898766899999999


Q ss_pred             HHHHHHHCCCCCCHHHHEECCCCCCCC---HHHHHHHHHHHHHC---------CCCEECCCCCHHHHHHHHHCCCEEEEC
Q ss_conf             223443104311001110115433452---05899999998875---------894722477734899998089889971
Q gi|254780801|r  144 DFVILCRQKYQLNVEGLMCIPPAMGNP---KPHFYLLSEIAREC---------KLTKLSMGMTRDFELAIASGATSVRIG  211 (222)
Q Consensus       144 ~l~~~i~~~~~L~i~GLMti~p~~~d~---~~~F~~l~~l~~~~---------~~~~LSmGMS~D~~~Ai~~Gst~vRiG  211 (222)
                      ++++.+.++++|++.||||..+...++   +..|....++++++         ....+|+|+|.+...+.++|+|+||+|
T Consensus       185 ~~~~~i~~~~~l~~~Gi~tH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~vrpG  264 (282)
T 3cpg_A          185 RIAQKIGTLDGIELQGLXTIGAHVHDETVIRRGFSHLRKTRDLILASGEPGTDRCRELSXGXTGDXELAIAEGSTIVRVG  264 (282)
T ss_dssp             HHHHHHHTCTTEEEEEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHHCCTTCTTCCEEECCCTTTHHHHHHTTCSEEEES
T ss_pred             HHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHCCCCEEECC
T ss_conf             99999997799985458850487788577999999999999999981899768889754886600999998699989828


Q ss_pred             HHHCCCCCCC
Q ss_conf             1323899999
Q gi|254780801|r  212 SGIFGERPCQ  221 (222)
Q Consensus       212 s~iFG~R~~~  221 (222)
                      ++|||.|||.
T Consensus       265 ~al~g~~~~~  274 (282)
T 3cpg_A          265 TAIFGERAFI  274 (282)
T ss_dssp             TTTC------
T ss_pred             CCCCCCCCCC
T ss_conf             5101287767