HHsearch alignment of GI: 254780801 and MMDB domain: 3cpg_A_
>3cpg_A (A:) Uncharacterized protein; unknown protein, TIM barrel, monomer, structural genomics, PSI-2, protein structure initiative; 1.71A {Bifidobacterium adolescentis ATCC15703}
Probab=99.96 E-value=9.8e-28 Score=207.48 Aligned_cols=219 Identities=29% Similarity=0.377 Sum_probs=193.4
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC--------------
Q ss_conf 899999999999999998198964418998718999999999997298100012100011110000--------------
Q gi|254780801|r 3 LGNKLQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRVALSCGQVIFAENKLQEAKKKWIPL-------------- 68 (222)
Q Consensus 3 i~~nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~~~~~G~~~fGENrvQE~~~K~~~l-------------- 68 (222)
+..|++.++.+|...+.++|+.|..|.+++|+|++....+..+|.+|.+.|+++..++..-+....
T Consensus 25 l~~nl~~~~~~i~~l~~~~g~~p~~v~~~~~iK~~~~~~~~~a~~~g~~~~a~k~~~~~~~~~~~~~~G~~~~~vs~~E~ 104 (282)
T 3cpg_A 25 ITDGVHRVLDRIAAAEEQAGREAGSVRLLAATKTRDIGEIXAAIDAGVRXIGENRPQEVTAKAEGLARRCAERGFSLGVA 104 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCTTSSEEEEECTTCCHHHHHHHHHTTCCCEEESCHHHHHHHHHHHHHHHHHTTEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999819990116999997898999999999869821110049999999997666432210000000
Q ss_pred ----C-CCCCCCEEEECCCCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHH
Q ss_conf ----0-12587302302443200132011100001222220013443333331143036889700466563465700012
Q gi|254780801|r 69 ----R-KEWDVQLRFIGSLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTK 143 (222)
Q Consensus 69 ----~-~~~~i~wHfIG~LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~ 143 (222)
. ..++.+|||+|+.+++.+..++....++.+|||++.++.+.+.+.+.++.++++++||++...+|+|++++++.
T Consensus 105 ~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~vds~~~l~~l~~~~~~~~~~~~v~i~i~~~~~~~rfG~~~~~~~ 184 (282)
T 3cpg_A 105 GAAPDAAAEHIPFHLIGQLQSNKIGKVLPVVDTIESVDSIDLAEKISRRAVARGITVGVLLEVNESGEESKSGCDPAHAI 184 (282)
T ss_dssp ------CCEEECEEECSCCCGGGHHHHTTTCSEEEEECCHHHHHHHHHHHHHHTCCEEEEEEBCCSSCTTSSSBCGGGHH
T ss_pred CCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHH
T ss_conf 00123457605760477466789999987458065569899999999999976998538999804898766899999999
Q ss_pred HHHHHHHCCCCCCHHHHEECCCCCCCC---HHHHHHHHHHHHHC---------CCCEECCCCCHHHHHHHHHCCCEEEEC
Q ss_conf 223443104311001110115433452---05899999998875---------894722477734899998089889971
Q gi|254780801|r 144 DFVILCRQKYQLNVEGLMCIPPAMGNP---KPHFYLLSEIAREC---------KLTKLSMGMTRDFELAIASGATSVRIG 211 (222)
Q Consensus 144 ~l~~~i~~~~~L~i~GLMti~p~~~d~---~~~F~~l~~l~~~~---------~~~~LSmGMS~D~~~Ai~~Gst~vRiG 211 (222)
++++.+.++++|++.||||..+...++ +..|....++++++ ....+|+|+|.+...+.++|+|+||+|
T Consensus 185 ~~~~~i~~~~~l~~~Gi~tH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~vrpG 264 (282)
T 3cpg_A 185 RIAQKIGTLDGIELQGLXTIGAHVHDETVIRRGFSHLRKTRDLILASGEPGTDRCRELSXGXTGDXELAIAEGSTIVRVG 264 (282)
T ss_dssp HHHHHHHTCTTEEEEEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHHCCTTCTTCCEEECCCTTTHHHHHHTTCSEEEES
T ss_pred HHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHCCCCEEECC
T ss_conf 99999997799985458850487788577999999999999999981899768889754886600999998699989828
Q ss_pred HHHCCCCCCC
Q ss_conf 1323899999
Q gi|254780801|r 212 SGIFGERPCQ 221 (222)
Q Consensus 212 s~iFG~R~~~ 221 (222)
++|||.|||.
T Consensus 265 ~al~g~~~~~ 274 (282)
T 3cpg_A 265 TAIFGERAFI 274 (282)
T ss_dssp TTTC------
T ss_pred CCCCCCCCCC
T ss_conf 5101287767