HHsearch results for GI: 254780801 and protein with PDBid: 2dy3_A
>2dy3_A Alanine racemase; alpha/beta barrel, isomerase; HET: PLP; 2.10A {Corynebacterium glutamicum}
Probab=99.36 E-value=8.3e-12 Score=99.31 Aligned_cols=203 Identities=16% Similarity=0.152 Sum_probs=127.6
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHCEEEEECC----CCCHHHHH-HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf 999999999999998198964418998718----99999999-9997298100012100011110000012587302302
Q gi|254780801|r 6 KLQVFKQKIENSAILAKRPKDSVSLVAVSK----MVDSKKIR-VALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIG 80 (222)
Q Consensus 6 nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK----~~~~e~I~-~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG 80 (222)
||..++.+++...+.+ ...+++||.| ++....|. .+.++|++.||--+++|+.+=..... +...-..|
T Consensus 9 dL~al~~N~~~i~~~~----~~~~i~aVVKAnAYGhG~~~va~~l~~~Gv~~faVa~~~Ea~~LR~~g~---~~~Ilil~ 81 (361)
T 2dy3_A 9 DLDAIAHNTRVLKQMA----GPAKLMAVVKANAYNHGVEKVAPVIAAHGADAFGVATLAEAMQLRDIGI---SQEVLCWI 81 (361)
T ss_dssp CHHHHHHHHHHHHHHH----TTSEEEEECHHHHHHTCHHHHHHHHHHTTCCEEEESSHHHHHHHHHTTC---CSEEEECC
T ss_pred EHHHHHHHHHHHHHHC----CCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCC---CCCEEEEC
T ss_conf 5999999999998567----9984999994554637899999999986949999832999999997389---99768755
Q ss_pred CCCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHH
Q ss_conf 44320013201110000122222001344333333114303688970046656346570001222344310431100111
Q gi|254780801|r 81 SLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQKYQLNVEGL 160 (222)
Q Consensus 81 ~LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~~~L~i~GL 160 (222)
.......+.++.+ +.+-++.+...+..+. ...++..+|.|+|+|+ .+|.||.++|+.+++..+..++++++.|+
T Consensus 82 ~~~~~~~~~~~~~-~~~~~v~s~~~~~~~~---~~~~~~~~vhLkvDTG--M~RlG~~~~e~~~~~~~~~~~~~l~~~gi 155 (361)
T 2dy3_A 82 WTPEQDFRAAIDR-NIDLAVISPAHAKALI---ETDAEHIRVSIKIDSG--LHRSGVDEQEWEGVFSALAAAPHIEVTGM 155 (361)
T ss_dssp CCTTSCHHHHHTT-TCEEEECSHHHHHHHH---TSCCSCEEEEEEBCCS--SCSSSBCHHHHHHHHHHHHTCTTEEEEEE
T ss_pred CCCHHHHHHHHHH-CCCEEECCHHHHHHHH---HHHCCCCEEEEEECCC--CCCCCCCHHHHHHHHHHHHHCCCCCEECC
T ss_conf 8874889999972-7741550289989999---9727886499998789--97679897999998999874356113201
Q ss_pred EECCCCCCCC-----HH---HHHHHHHHHHHCC--CCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCCC
Q ss_conf 0115433452-----05---8999999988758--947224777348999980898899711323899999
Q gi|254780801|r 161 MCIPPAMGNP-----KP---HFYLLSEIARECK--LTKLSMGMTRDFELAIASGATSVRIGSGIFGERPCQ 221 (222)
Q Consensus 161 Mti~p~~~d~-----~~---~F~~l~~l~~~~~--~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~~ 221 (222)
||=-+..+++ .. .|..+-+...+.. ....++.-|.-.-.--+.--+|||+|.++||-.|..
T Consensus 156 ~tH~a~ad~~d~~~~~~Q~~~F~~~~~~l~~~~~~~~~~h~anS~~~~~~~~~~~d~vR~Gi~lYG~~~~~ 226 (361)
T 2dy3_A 156 FTHLACADEPENPETDRQIIAFRRALALARKHGLECPVNHVCNSPAFLTRSDLHMEMVRPGLAFYGLEPVA 226 (361)
T ss_dssp ECCCC--------CHHHHHHHHHHHHHHHHHTTCCCCSCBCCCHHHHHHCGGGCTTEECCCGGGGTCCSST
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHCCCHHCCCEEECCEEEECCCCCC
T ss_conf 23540468765526899999999999998752786405565153666539410166230140476667775