HHsearch results for GI: 254780801 and protein with PDBid: 3kw3_A
>3kw3_A Alanine racemase; niaid, ssgcid, seattle structural genomics center for infectious disease, iodide SOAK, LLP, CAT-scratch disease; HET: LLP; 2.04A {Bartonella henselae}
Probab=99.58 E-value=8.4e-15 Score=119.45 Aligned_cols=206 Identities=15% Similarity=0.128 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHHHHCCCCHHHCEEEEECCC----CCHHHHH-HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECC
Q ss_conf 999999999999981989644189987189----9999999-99972981000121000111100000125873023024
Q gi|254780801|r 7 LQVFKQKIENSAILAKRPKDSVSLVAVSKM----VDSKKIR-VALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGS 81 (222)
Q Consensus 7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~----~~~e~I~-~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~ 81 (222)
++.++.+++...+..+ ..+++||.|. +....|. .+.++|++.||-.+++|+.+=.....+ . ..-+++.
T Consensus 27 l~ai~~N~~~i~~~~~----~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~i~Ea~~LR~~g~~--~-~il~l~~ 99 (376)
T 3kw3_A 27 VRAIVANYRTLAQHVA----PTECSAVVKANAYGLGAHKIAPALYQAGCRTFFVAQIEEALQLKAVLPE--N-VMIALLN 99 (376)
T ss_dssp HHHHHHHHHHHHHHHT----TSEECEECHHHHHTTCHHHHHHHHHHTTCCEEEESSHHHHHHHHHHSCS--S-CEEEETT
T ss_pred HHHHHHHHHHHHHHCC----CCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCC--C-CHHHHHC
T ss_conf 9999999999997579----9829999977414165999999999869699999388999999972885--4-2556306
Q ss_pred CCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHE
Q ss_conf 43200132011100001222220013443333331143036889700466563465700012223443104311001110
Q gi|254780801|r 82 LQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQKYQLNVEGLM 161 (222)
Q Consensus 82 LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLM 161 (222)
.........+...+.+.++++...++.++..+.+.+++.+|+|+|+|| .+|.||.++|+.++++.+..++++++.|+|
T Consensus 100 ~~~~~~~~~~~~~~~~~~v~s~~~l~~l~~~a~~~~~~~~vhlkvDTG--M~RlG~~~~e~~~~i~~i~~~~~l~i~Gi~ 177 (376)
T 3kw3_A 100 GFPHKAEEFVAQSGIIPLLNSWSTIEDWQTLCQKKNKKFPAIIQVDTN--MSRLGLDKKELQKLIKNPTIFEKAEIKYIL 177 (376)
T ss_dssp CCCTTCHHHHHHTTCEEEECSHHHHHHHHHHHHHHTCCCEEEEEBCSS--CCSSSBCHHHHHHHHHCCTHHHHSEEEEEE
T ss_pred CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECC--CCCCCCCHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 797789999874123440065999999998898638871499998489--984788868999998876640474377898
Q ss_pred ECCCCCCCCH-----HHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCCC
Q ss_conf 1154334520-----58999999988758947224777348999980898899711323899999
Q gi|254780801|r 162 CIPPAMGNPK-----PHFYLLSEIARECKLTKLSMGMTRDFELAIASGATSVRIGSGIFGERPCQ 221 (222)
Q Consensus 162 ti~p~~~d~~-----~~F~~l~~l~~~~~~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~~ 221 (222)
|==+..+++. ..|.........+....+|+.-|.-.-.--+.--+|||.|.+|||..|..
T Consensus 178 THfa~ad~~~~~~~~~q~~~~~~~~~~~~~~~~h~~NSag~~~~~~~~~d~vR~Gi~lYG~~p~~ 242 (376)
T 3kw3_A 178 SHLANGEDASHSSNNKQLAAFKRVLAQLPTCKVSFANSGGIFLGSDFYFDLVRPGIALYGVDPHG 242 (376)
T ss_dssp CCCSSTTCTTCHHHHHHHHHHHHHHTTSCCCCEECCCHHHHTTCGGGTTTEECCSGGGGTCCTTC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHCCCCEECCEEEECCCCCC
T ss_conf 77613556782889999999999975177546555476998639232146420340252577643