Query         gi|254780801|ref|YP_003065214.1| hypothetical protein CLIBASIA_03460 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 222
No_of_seqs    125 out of 3258
Neff          5.9 
Searched_HMMs 23785
Date          Mon May 30 12:55:09 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780801.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3cpg_A Uncharacterized protein 100.0       0       0  587.5  17.4  220    2-221    24-274 (282)
  2 1w8g_A YGGS, hypothetical UPF0 100.0       0       0  585.6  18.5  221    1-221     1-232 (234)
  3 1ct5_A Protein (yeast hypothet 100.0       0       0  538.2  16.2  218    2-221    13-250 (256)
  4 3kw3_A Alanine racemase; niaid  99.6 8.4E-15 3.5E-19  119.5  10.0  206    7-221    27-242 (376)
  5 1xfc_A Alanine racemase; alpha  99.6   5E-14 2.1E-18  114.2  12.9  204    7-220    18-239 (384)
  6 3e5p_A Alanine racemase; ALR,   99.5 2.8E-13 1.2E-17  109.2   9.6  206    6-220    14-233 (371)
  7 2vd8_A Alanine racemase; pyrid  99.5 6.6E-13 2.8E-17  106.7  11.3  205    7-221    18-238 (391)
  8 1vfs_A Alanine racemase; TIM-b  99.4 1.1E-12 4.5E-17  105.3  11.6  205    6-220    13-235 (386)
  9 1bd0_A Alanine racemase; isome  99.4   3E-12 1.2E-16  102.3  12.2  205    7-221    14-231 (388)
 10 3llx_A Predicted amino acid al  99.4 2.7E-13 1.1E-17  109.3   6.3  204    7-220    21-245 (376)
 11 1rcq_A Catabolic alanine racem  99.4 3.6E-12 1.5E-16  101.8  11.3  187   27-221    25-220 (357)
 12 2dy3_A Alanine racemase; alpha  99.4 8.3E-12 3.5E-16   99.3  11.7  203    6-221     9-226 (361)
 13 3co8_A Alanine racemase; prote  99.3 3.5E-11 1.5E-15   95.1  13.0  203    7-221    16-234 (380)
 14 3oo2_A Alanine racemase 1; inf  99.2 6.4E-11 2.7E-15   93.3  10.6  204    7-220    18-233 (385)
 15 3gwq_A D-serine deaminase; YP_  99.2   4E-11 1.7E-15   94.7   9.5  200    3-218    56-285 (426)
 16 3hur_A Alanine racemase; struc  99.2 1.9E-10 8.1E-15   90.1  12.8  201    7-221    16-236 (395)
 17 2rjg_A Alanine racemase; alpha  99.1 9.5E-10   4E-14   85.4  11.5  199    3-221    33-241 (379)
 18 2p3e_A Diaminopimelate decarbo  97.9  0.0002 8.3E-09   49.7  11.3  168    8-182    42-227 (420)
 19 3n2o_A ADC, biosynthetic argin  97.9 0.00028 1.2E-08   48.6  11.4  177    3-182    74-278 (648)
 20 3nzq_A ADC, biosynthetic argin  97.9 0.00052 2.2E-08   46.8  12.7  177    3-183    96-296 (666)
 21 3n2b_A Diaminopimelate decarbo  97.8 0.00032 1.3E-08   48.3  10.5  179    8-192    60-262 (441)
 22 2qgh_A Diaminopimelate decarbo  97.6 0.00078 3.3E-08   45.6  10.4  159    7-171    40-214 (425)
 23 3nzp_A Arginine decarboxylase;  97.6  0.0015 6.3E-08   43.7  11.8  178    3-183    55-257 (619)
 24 2j66_A BTRK, decarboxylase; bu  97.2  0.0043 1.8E-07   40.6  10.2  158    8-172    25-197 (428)
 25 2plj_A Lysine/ornithine decarb  97.1  0.0027 1.1E-07   42.0   8.7  176    8-192    63-253 (419)
 26 3btn_A Antizyme inhibitor 1; T  96.5  0.0079 3.3E-07   38.9   7.2  175    8-195    46-240 (448)
 27 1f3t_A ODC, ornithine decarbox  96.5   0.016 6.9E-07   36.7   8.8  152    7-171    45-206 (425)
 28 1twi_A Diaminopimelate decarbo  96.4   0.066 2.8E-06   32.7  13.2  162    3-171    40-219 (434)
 29 7odc_A Protein (ornithine deca  96.1   0.069 2.9E-06   32.6  10.1  153    7-172    45-207 (424)
 30 2o0t_A Diaminopimelate decarbo  95.9   0.042 1.8E-06   34.0   8.0  157    8-172    50-225 (467)
 31 3n29_A Carboxynorspermidine de  95.5    0.16 6.6E-06   30.1   9.8  111   26-146    68-192 (418)
 32 2oo0_A ODC, ornithine decarbox  95.0    0.24   1E-05   28.9  10.3  171    8-192    56-245 (471)
 33 2nva_A Arginine decarboxylase,  94.4     0.3 1.2E-05   28.3   8.7  137   26-171    39-185 (372)
 34 1h1y_A D-ribulose-5-phosphate   91.2    0.86 3.6E-05   25.2   7.4   73  148-220   132-210 (228)
 35 3mt1_A Putative carboxynorsper  91.0    0.96   4E-05   24.9  10.1  150   27-192    29-197 (365)
 36 3ajx_A 3-hexulose-6-phosphate   91.0    0.27 1.1E-05   28.5   4.6  152   52-220    38-195 (207)
 37 3f4w_A Putative hexulose 6 pho  89.6    0.31 1.3E-05   28.1   3.9  151   52-219    38-195 (211)
 38 2fli_A Ribulose-phosphate 3-ep  85.3     1.2 4.9E-05   24.3   4.8   69  152-220   129-207 (220)
 39 2yxx_A Diaminopimelate decarbo  83.9     2.5 0.00011   22.0  10.7  174    8-192    21-212 (386)
 40 1rpx_A Protein (ribulose-phosp  83.1       2 8.3E-05   22.7   5.2   68  153-220   139-216 (230)
 41 1knw_A Diaminopimelate decarbo  83.0     2.7 0.00012   21.8   8.7  143   28-178    47-206 (425)
 42 3inp_A D-ribulose-phosphate 3-  81.5     2.8 0.00012   21.7   5.5   67  153-219   155-231 (246)
 43 1q6o_A Humps, 3-keto-L-gulonat  81.3     1.4 6.1E-05   23.7   3.9  151   53-219    42-199 (216)
 44 1tqj_A Ribulose-phosphate 3-ep  80.6     2.8 0.00012   21.7   5.2   68  153-220   133-210 (230)
 45 3ldv_A Orotidine 5'-phosphate   79.8       2 8.6E-05   22.6   4.3  160   52-219    65-242 (255)
 46 3exr_A RMPD (hexulose-6-phosph  74.1     1.1 4.6E-05   24.4   1.6  159   52-220    43-205 (221)
 47 3ctl_A D-allulose-6-phosphate   74.1       5 0.00021   20.0   5.6   69  152-220   126-206 (231)
 48 1tqx_A D-ribulose-5-phosphate   72.5     5.5 0.00023   19.8   6.3   68  153-220   137-210 (227)
 49 3l5l_A Xenobiotic reductase A;  70.6       6 0.00025   19.5   5.6  116  102-217   207-331 (363)
 50 1eix_A Orotidine 5'-monophosph  67.2     6.4 0.00027   19.3   4.3  140   72-219    70-229 (245)
 51 1vqt_A Orotidine 5'-phosphate   63.2     6.6 0.00028   19.2   3.7  140   54-219    47-200 (213)
 52 1to3_A Putative aldolase YIHT;  61.0     9.1 0.00038   18.3   8.9  108  104-216   142-259 (304)
 53 3jr2_A Hexulose-6-phosphate sy  59.6     3.7 0.00015   20.9   1.9  150   52-218    44-201 (218)
 54 3n9r_A Fructose-bisphosphate a  58.8     9.9 0.00042   18.0   4.7   97  118-215   125-259 (307)
 55 2yyu_A Orotidine 5'-phosphate   58.3     7.4 0.00031   18.9   3.3  157   52-219    42-223 (246)
 56 2wf7_A Beta-PGM, beta-phosphog  54.9     8.5 0.00036   18.5   3.1   37  177-213   151-191 (221)
 57 3cu2_A Ribulose-5-phosphate 3-  53.9      12  0.0005   17.5   5.0   66  152-217   146-223 (237)
 58 3m47_A Orotidine 5'-phosphate   49.4     6.5 0.00027   19.2   1.8  152   53-219    51-210 (228)
 59 1z41_A YQJM, probable NADH-dep  42.7      18 0.00074   16.4   7.6  114  102-217   193-313 (338)
 60 3hgj_A Chromate reductase; TIM  42.3      18 0.00075   16.3   8.7  100  116-217   216-324 (349)
 61 3g3d_A UMP synthase, uridine 5  40.5     7.2  0.0003   19.0   0.9  181   28-219    84-290 (312)
 62 1y8q_B Anthracycline-, ubiquit  33.2      25   0.001   15.4   6.1   71   49-120    64-136 (640)
 63 1dbt_A Orotidine 5'-phosphate   30.9      27  0.0011   15.1   3.4  155   53-219    42-222 (239)
 64 1vrd_A Inosine-5'-monophosphat  30.0      28  0.0012   15.0   2.7   51  171-221   323-379 (494)
 65 1zfj_A Inosine monophosphate d  27.7      30  0.0013   14.8   2.9   49  172-220   320-374 (491)
 66 2czd_A Orotidine 5'-phosphate   27.6      30  0.0013   14.8   3.0  148   53-219    38-193 (208)
 67 3do6_A Formate--tetrahydrofola  27.1      31  0.0013   14.7   6.3  158    5-171   344-527 (543)
 68 1gvf_A Tagatose-bisphosphate a  27.0      31  0.0013   14.7   4.5   75  138-215   156-236 (286)
 69 3ffs_A Inosine-5-monophosphate  25.8      33  0.0014   14.5   2.9   49  171-219   229-283 (400)
 70 3gr7_A NADPH dehydrogenase; fl  25.1      34  0.0014   14.5   8.3   97  120-217   210-313 (340)
 71 2ox1_A 3-dehydroquinate dehydr  24.8      23 0.00095   15.6   1.3   21   73-93     77-97  (196)
 72 1qwl_A KATA catalase; beta bar  24.2      35  0.0015   14.4   3.1   60  105-166   242-302 (505)
 73 3lz8_A Putative chaperone DNAJ  24.0      13 0.00056   17.2   0.0   44   26-69     29-81  (329)
 74 1jcn_A Inosine monophosphate d  24.0      35  0.0015   14.3   3.1   50  171-220   341-396 (514)
 75 1tt5_A APPBP1, amyloid protein  23.6      36  0.0015   14.3   3.8   81   37-119    67-151 (531)
 76 3kru_A NADH:flavin oxidoreduct  23.2      36  0.0015   14.2   8.4  100  116-217   207-313 (343)
 77 1zco_A 2-dehydro-3-deoxyphosph  23.1      37  0.0015   14.2   3.7   71  136-208   140-224 (262)
 78 1ep3_A Dihydroorotate dehydrog  22.5      38  0.0016   14.1   5.0   47  173-220   229-278 (311)
 79 1y8q_A Ubiquitin-like 1 activa  21.9      38  0.0016   14.1   2.0   91   27-120    38-153 (346)
 80 3igs_A N-acetylmannosamine-6-p  20.8      41  0.0017   13.9   5.2   95  107-217   119-216 (232)
 81 1eep_A Inosine 5'-monophosphat  20.7      41  0.0017   13.9   2.8   50  171-220   239-294 (404)
 82 3h5n_A MCCB protein; ubiquitin  20.1      42  0.0018   13.8   3.0   71   49-120   165-237 (353)

No 1  
>3cpg_A Uncharacterized protein; unknown protein, TIM barrel, monomer, structural genomics, PSI-2, protein structure initiative; 1.71A {Bifidobacterium adolescentis ATCC15703}
Probab=100.00  E-value=0  Score=587.51  Aligned_cols=220  Identities=30%  Similarity=0.403  Sum_probs=210.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC-----------
Q ss_conf             989999999999999999819896441899871899999999999729810001210001111000001-----------
Q gi|254780801|r    2 SLGNKLQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRVALSCGQVIFAENKLQEAKKKWIPLRK-----------   70 (222)
Q Consensus         2 ~i~~nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~~~~~G~~~fGENrvQE~~~K~~~l~~-----------   70 (222)
                      .|++||+.|+++|++||.++||+|++|+|||||||+|+++|.++|++|+++||||||||+.+|+..|++           
T Consensus        24 ~i~~nl~~V~~rI~~A~~~agR~p~~V~LiAVSK~~p~e~I~~a~~~G~r~FGENrvQE~~~K~~~l~~~~~~~~~~~~~  103 (282)
T 3cpg_A           24 EITDGVHRVLDRIAAAEEQAGREAGSVRLLAATKTRDIGEIMAAIDAGVRMIGENRPQEVTAKAEGLARRCAERGFSLGV  103 (282)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCTTSSEEEEECTTCCHHHHHHHHHTTCCCEEESCHHHHHHHHHHHHHHHHHTTEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             99999999999999999982989366599999899899999999986997036870899999999987641000122222


Q ss_pred             --------CCCCCEEEECCCCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHH
Q ss_conf             --------258730230244320013201110000122222001344333333114303688970046656346570001
Q gi|254780801|r   71 --------EWDVQLRFIGSLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQT  142 (222)
Q Consensus        71 --------~~~i~wHfIG~LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el  142 (222)
                              ..+|+|||||||||||+|+++++|+|||||||+++|++|++++.+.+++++||||||+++|++|+||.|+++
T Consensus       104 ~~~~~~~~~~~I~WHfIG~LQsNKvk~iv~~~~~IhSVDs~kla~~l~~~a~~~~~~~~vlIQVNis~E~sK~G~~p~e~  183 (282)
T 3cpg_A          104 AGAAPDAAAEHIPFHLIGQLQSNKIGKVLPVVDTIESVDSIDLAEKISRRAVARGITVGVLLEVNESGEESKSGCDPAHA  183 (282)
T ss_dssp             C------CCEEECEEECSCCCGGGHHHHTTTCSEEEEECCHHHHHHHHHHHHHHTCCEEEEEEBCCSSCTTSSSBCGGGH
T ss_pred             CCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHH
T ss_conf             23444456777269994464200077765106466542564305889988762476616999962587756688787779


Q ss_pred             HHHHHHHHCCCCCCHHHHEECCCCCCCC---HHHHHHHHHHHHHC---------CCCEECCCCCHHHHHHHHHCCCEEEE
Q ss_conf             2223443104311001110115433452---05899999998875---------89472247773489999808988997
Q gi|254780801|r  143 KDFVILCRQKYQLNVEGLMCIPPAMGNP---KPHFYLLSEIAREC---------KLTKLSMGMTRDFELAIASGATSVRI  210 (222)
Q Consensus       143 ~~l~~~i~~~~~L~i~GLMti~p~~~d~---~~~F~~l~~l~~~~---------~~~~LSmGMS~D~~~Ai~~Gst~vRi  210 (222)
                      .++++.+..+++|+++|||||||++.|+   +++|..|+++++.+         ++++||||||+||++||++|||||||
T Consensus       184 ~~l~~~i~~~~~l~l~GLMti~p~~~d~~~~r~~F~~l~~l~d~l~~~~~~~~~~~~~LSMGMS~Dye~AIe~GST~VRI  263 (282)
T 3cpg_A          184 IRIAQKIGTLDGIELQGLMTIGAHVHDETVIRRGFSHLRKTRDLILASGEPGTDRCRELSMGMTGDMELAIAEGSTIVRV  263 (282)
T ss_dssp             HHHHHHHHTCTTEEEEEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHHCCTTCTTCCEEECCCTTTHHHHHHTTCSEEEE
T ss_pred             HHHHHHHHHHCCHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHCCCCEEEC
T ss_conf             99999986510010221786368888877899999999999999998568877998988170077999999869997980


Q ss_pred             CHHHCCCCCCC
Q ss_conf             11323899999
Q gi|254780801|r  211 GSGIFGERPCQ  221 (222)
Q Consensus       211 Gs~iFG~R~~~  221 (222)
                      ||+|||+|.|.
T Consensus       264 GsaIFG~R~y~  274 (282)
T 3cpg_A          264 GTAIFGERAFI  274 (282)
T ss_dssp             STTTC------
T ss_pred             CCCCCCCCCCC
T ss_conf             86523498887


No 2  
>1w8g_A YGGS, hypothetical UPF0001 protein YGGS; structural genomics, hypothetical protein, putative enzyme with PLP-binding domain; HET: PLP ICT; 2.0A {Escherichia coli}
Probab=100.00  E-value=0  Score=585.55  Aligned_cols=221  Identities=32%  Similarity=0.433  Sum_probs=207.6

Q ss_pred             CC-HHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCC--CCCCEE
Q ss_conf             99-899999999999999998198964418998718999999999997298100012100011110000012--587302
Q gi|254780801|r    1 MS-LGNKLQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRVALSCGQVIFAENKLQEAKKKWIPLRKE--WDVQLR   77 (222)
Q Consensus         1 M~-i~~nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~~~~~G~~~fGENrvQE~~~K~~~l~~~--~~i~wH   77 (222)
                      |+ |++||..|+++|++||.++||+|++|+|||||||+|+++|.++|++|+++||||||||+.+|+..|+..  ++++||
T Consensus         1 M~~i~~nl~~I~~~I~~a~~~~gR~~~~V~LiaVsK~~~~e~I~~a~~~G~r~fGENrvQE~~~K~~~l~~~~~~~i~WH   80 (234)
T 1w8g_A            1 MNDIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWH   80 (234)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECTTSCHHHHHHHHHTTCCEEEESSHHHHHHHHHHHHHTTCCSCEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             91799999999999999999809996876999998998999999999869971468741899999999875158880699


Q ss_pred             EECCCCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCH
Q ss_conf             30244320013201110000122222001344333333114303688970046656346570001222344310431100
Q gi|254780801|r   78 FIGSLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQKYQLNV  157 (222)
Q Consensus        78 fIG~LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~~~L~i  157 (222)
                      |||||||||+|+++++||+||||||+++|++|++++.+.+++++||||||+++|++|+||.|+++.++++.+..+++|++
T Consensus        81 fIG~LQsNKvk~iv~~~~~IhSVDs~kla~~l~~~~~~~~~~~~vliQVNis~E~~K~G~~p~e~~~~~~~~~~~~~l~~  160 (234)
T 1w8g_A           81 FIGPLQSNKSRLVAEHFDWCHTIDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRL  160 (234)
T ss_dssp             ECSCCCGGGHHHHHHHCSEEEEECSHHHHHHHHHHSCTTSCCEEEEEEECCSCTTCCCSBCGGGHHHHHHHHHTCTTEEE
T ss_pred             EECCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCE
T ss_conf             82574101276613321101031027799999854354268751899981377656678527779999999986799756


Q ss_pred             HHHEECCCCCCCCHHHHHHHHHH---HHHC-----CCCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCCC
Q ss_conf             11101154334520589999999---8875-----8947224777348999980898899711323899999
Q gi|254780801|r  158 EGLMCIPPAMGNPKPHFYLLSEI---AREC-----KLTKLSMGMTRDFELAIASGATSVRIGSGIFGERPCQ  221 (222)
Q Consensus       158 ~GLMti~p~~~d~~~~F~~l~~l---~~~~-----~~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~~  221 (222)
                      +|||||||.++|+.+.|..++++   .+++     ++++||||||+||++||++|||||||||+|||+|+|.
T Consensus       161 ~GLMti~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~LSMGMS~D~~~AI~~GsT~VRiGsaiFG~R~y~  232 (234)
T 1w8g_A          161 RGLMAIPAPESEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYS  232 (234)
T ss_dssp             EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHSTTCCEEECCCGGGHHHHHHHTCSEEEESHHHHCC----
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHCCCCEEECCCCCCCCCCCC
T ss_conf             788643798402789999999999999998732799896677206359999986999698187424699999


No 3  
>1ct5_A Protein (yeast hypothetical protein, selenoMet); TIM barrel, pyridoxal-5'-phosphate, selenomethionine, MAD, structural genomics, PSI; HET: PLP; 2.00A {Saccharomyces cerevisiae} SCOP: c.1.6.2 PDB: 1b54_A*
Probab=100.00  E-value=0  Score=538.25  Aligned_cols=218  Identities=29%  Similarity=0.376  Sum_probs=198.6

Q ss_pred             CHHHHHHHHHHHHHHHHHH--CCCCHHHCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEE
Q ss_conf             9899999999999999998--19896441899871899999999999729810001210001111000001258730230
Q gi|254780801|r    2 SLGNKLQVFKQKIENSAIL--AKRPKDSVSLVAVSKMVDSKKIRVALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFI   79 (222)
Q Consensus         2 ~i~~nl~~i~~~I~~a~~~--~gR~~~~v~LiaVtK~~~~e~I~~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfI   79 (222)
                      +|.+||+.|+++|+.+|++  +||+|++|+|||||||+|+++|..+|++|+++|||||+||+.+|+..|+.  +++||||
T Consensus        13 ~l~~~~~~i~~~I~~a~~~~~~~r~~~~V~LiaVSK~~~~~~I~~~~~~G~~~fGENrvQE~~~K~~~l~~--~i~WHfI   90 (256)
T 1ct5_A           13 QLIAQYESVREVVNAEAKNVHVNENASKILLLVVSKLKPASDIQILYDHGVREFGENYVQELIEKAKLLPD--DIKWHFI   90 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHTC-------CCEEEEECTTSCHHHHHHHHHHTCCEEEECCHHHHHHHHHHSCT--TCEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC--CEEEEEE
T ss_conf             99999999999999998873269996866999998998999999999869962468659999998664035--3468996


Q ss_pred             CCCCCCHHHHHCCCC--HHCCCCCCCCHHHHHHHHHHHHCC---CEEEEEEEECCCCCCCCCCCCC-HHHHHHHHH--HC
Q ss_conf             244320013201110--000122222001344333333114---3036889700466563465700-012223443--10
Q gi|254780801|r   80 GSLQSNKVSEIVSLF--DVIETVSREKTASLLSLEMIKQSR---FLPVYIQVNTGYEIQKSGIMPN-QTKDFVILC--RQ  151 (222)
Q Consensus        80 G~LQsNKvk~i~~~~--~~Ihsvds~~~a~~L~~~~~~~~~---~~~vliQVN~~~e~~K~G~~p~-el~~l~~~i--~~  151 (222)
                      |||||||+|++++++  ++||||||++++++|++.+.+.++   +++||||||+++|++|+||.|+ ++.++++.+  ..
T Consensus        91 G~LQsNKvk~i~~~~~~~~I~svds~~la~~l~~~~~~~~~~~~~~~vlIQVNi~~e~sK~G~~~~~~l~~~~~~~~~~~  170 (256)
T 1ct5_A           91 GGLQTNKCKDLAKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSHEDQKSGLNNEAEIFEVIDFFLSEE  170 (256)
T ss_dssp             SCCCGGGHHHHHHCTTEEEEEEECSHHHHHHHHHHHHHHCTTSCCEEEEEEBCCSSSCCSSSBCCHHHHHHHHHHHHSTT
T ss_pred             CCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             65321169999974367702325478889999998887521457614888640255557888896789999999999986


Q ss_pred             CCCCCHHHHEECCCCCCC-----CHHHHHHHHHHHHHCC-----CCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCCC
Q ss_conf             431100111011543345-----2058999999988758-----947224777348999980898899711323899999
Q gi|254780801|r  152 KYQLNVEGLMCIPPAMGN-----PKPHFYLLSEIARECK-----LTKLSMGMTRDFELAIASGATSVRIGSGIFGERPCQ  221 (222)
Q Consensus       152 ~~~L~i~GLMti~p~~~d-----~~~~F~~l~~l~~~~~-----~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~~  221 (222)
                      +++|+++|||||||.+.+     ++.+|..++++++++.     ..+||||||+||++||++|||||||||+|||+|||+
T Consensus       171 ~~~l~l~GLM~igp~~~~~~~~~~~~~F~~l~~l~~~l~~~~~~~~~LSMGMS~Dye~AI~~GsT~VRIGsaiFG~Rp~~  250 (256)
T 1ct5_A          171 CKYIKLNGLMTIGSWNVSHEDSKENRDFATLVEWKKKIDAKFGTSLKLSMGMSADFREAIRQGTAEVRIGTDIFGARPPK  250 (256)
T ss_dssp             CCSEEEEEEECCCCCC---------HHHHHHHHHHHHHHHHHCCCCEEECCCTTTHHHHHHTTCSEEEESHHHHC-----
T ss_pred             CCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
T ss_conf             21132048634467788821257899999999999997171699798717378799999987999698084332799997


No 4  
>3kw3_A Alanine racemase; niaid, ssgcid, seattle structural genomics center for infectious disease, iodide SOAK, LLP, CAT-scratch disease; HET: LLP; 2.04A {Bartonella henselae}
Probab=99.58  E-value=8.4e-15  Score=119.45  Aligned_cols=206  Identities=15%  Similarity=0.128  Sum_probs=141.7

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHCEEEEECCC----CCHHHHH-HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECC
Q ss_conf             999999999999981989644189987189----9999999-99972981000121000111100000125873023024
Q gi|254780801|r    7 LQVFKQKIENSAILAKRPKDSVSLVAVSKM----VDSKKIR-VALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGS   81 (222)
Q Consensus         7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~----~~~e~I~-~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~   81 (222)
                      ++.++.+++...+..+    ..+++||.|.    +....|. .+.++|++.||-.+++|+.+=.....+  . ..-+++.
T Consensus        27 l~ai~~N~~~i~~~~~----~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~i~Ea~~LR~~g~~--~-~il~l~~   99 (376)
T 3kw3_A           27 VRAIVANYRTLAQHVA----PTECSAVVKANAYGLGAHKIAPALYQAGCRTFFVAQIEEALQLKAVLPE--N-VMIALLN   99 (376)
T ss_dssp             HHHHHHHHHHHHHHHT----TSEECEECHHHHHTTCHHHHHHHHHHTTCCEEEESSHHHHHHHHHHSCS--S-CEEEETT
T ss_pred             HHHHHHHHHHHHHHCC----CCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCC--C-CHHHHHC
T ss_conf             9999999999997579----9829999977414165999999999869699999388999999972885--4-2556306


Q ss_pred             CCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHE
Q ss_conf             43200132011100001222220013443333331143036889700466563465700012223443104311001110
Q gi|254780801|r   82 LQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQKYQLNVEGLM  161 (222)
Q Consensus        82 LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLM  161 (222)
                      .........+...+.+.++++...++.++..+.+.+++.+|+|+|+||  .+|.||.++|+.++++.+..++++++.|+|
T Consensus       100 ~~~~~~~~~~~~~~~~~~v~s~~~l~~l~~~a~~~~~~~~vhlkvDTG--M~RlG~~~~e~~~~i~~i~~~~~l~i~Gi~  177 (376)
T 3kw3_A          100 GFPHKAEEFVAQSGIIPLLNSWSTIEDWQTLCQKKNKKFPAIIQVDTN--MSRLGLDKKELQKLIKNPTIFEKAEIKYIL  177 (376)
T ss_dssp             CCCTTCHHHHHHTTCEEEECSHHHHHHHHHHHHHHTCCCEEEEEBCSS--CCSSSBCHHHHHHHHHCCTHHHHSEEEEEE
T ss_pred             CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECC--CCCCCCCHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf             797789999874123440065999999998898638871499998489--984788868999998876640474377898


Q ss_pred             ECCCCCCCCH-----HHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCCC
Q ss_conf             1154334520-----58999999988758947224777348999980898899711323899999
Q gi|254780801|r  162 CIPPAMGNPK-----PHFYLLSEIARECKLTKLSMGMTRDFELAIASGATSVRIGSGIFGERPCQ  221 (222)
Q Consensus       162 ti~p~~~d~~-----~~F~~l~~l~~~~~~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~~  221 (222)
                      |==+..+++.     ..|.........+....+|+.-|.-.-.--+.--+|||.|.+|||..|..
T Consensus       178 THfa~ad~~~~~~~~~q~~~~~~~~~~~~~~~~h~~NSag~~~~~~~~~d~vR~Gi~lYG~~p~~  242 (376)
T 3kw3_A          178 SHLANGEDASHSSNNKQLAAFKRVLAQLPTCKVSFANSGGIFLGSDFYFDLVRPGIALYGVDPHG  242 (376)
T ss_dssp             CCCSSTTCTTCHHHHHHHHHHHHHHTTSCCCCEECCCHHHHTTCGGGTTTEECCSGGGGTCCTTC
T ss_pred             EEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHCCCCEECCEEEECCCCCC
T ss_conf             77613556782889999999999975177546555476998639232146420340252577643


No 5  
>1xfc_A Alanine racemase; alpha-beta barrel, beta-structure for C-terminal domain, internal aldimine form, isomerase; HET: PLP; 1.90A {Mycobacterium tuberculosis}
Probab=99.57  E-value=5e-14  Score=114.24  Aligned_cols=204  Identities=19%  Similarity=0.179  Sum_probs=140.1

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHCEEEEECCC----CCHHHHH-HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECC
Q ss_conf             999999999999981989644189987189----9999999-99972981000121000111100000125873023024
Q gi|254780801|r    7 LQVFKQKIENSAILAKRPKDSVSLVAVSKM----VDSKKIR-VALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGS   81 (222)
Q Consensus         7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~----~~~e~I~-~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~   81 (222)
                      +..++.+++...+.++    ..+++||.|.    +....|. .++++|++.||..+++|+.+=.....   +...-..|+
T Consensus        18 l~al~~N~~~ir~~~~----~~~i~aVVKanAYGhG~~~ia~~l~~~Gi~~faVa~i~EA~~LR~~g~---~~~Il~l~~   90 (384)
T 1xfc_A           18 LGAIEHNVRVLREHAG----HAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGI---TAPVLAWLH   90 (384)
T ss_dssp             HHHHHHHHHHHHHHHT----TSEEEEECHHHHHTTCHHHHHHHHHHTTCCEEEESCHHHHHHHHHTTC---CSCEEECCC
T ss_pred             HHHHHHHHHHHHHHCC----CCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCC---CCCEEEECC
T ss_conf             9999999999997689----983999992524537899999999977979899938999999998289---886699707


Q ss_pred             CCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHH---CCCCCCHH
Q ss_conf             432001320111000012222200134433333311430368897004665634657000122234431---04311001
Q gi|254780801|r   82 LQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCR---QKYQLNVE  158 (222)
Q Consensus        82 LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~---~~~~L~i~  158 (222)
                      ....-...++. .+++.+|++...++.++..+.+.+++.+|+|+||+|  .+|.||.|+++.+++..+.   ..++|++.
T Consensus        91 ~~~~~~~~~~~-~~~~~~i~s~~~l~~l~~~~~~~~~~~~vhLkvDTG--M~RlG~~~~~~~~~~~~~~~~~~~~~l~~~  167 (384)
T 1xfc_A           91 PPGIDFGPALL-ADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTG--LNRNGVGPAQFPAMLTALRQAMAEDAVRLR  167 (384)
T ss_dssp             CTTCCCHHHHH-TTCEEEECSHHHHHHHHHHHHHHCCCEEEEEEBCSS--CCSSSBCTTTHHHHHHHHHHHHHTTSEEEE
T ss_pred             CCHHHHHHHHH-CCCEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECC--CCCCCCCCHHHHHHHHHHHHHHHCCCEEEE
T ss_conf             98788999975-585466366999999999999739983599998079--887887805679999999866534726674


Q ss_pred             HHEECCCCCCCC-----HH---HHHHHHHHHHHC--CCCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCC
Q ss_conf             110115433452-----05---899999998875--894722477734899998089889971132389999
Q gi|254780801|r  159 GLMCIPPAMGNP-----KP---HFYLLSEIAREC--KLTKLSMGMTRDFELAIASGATSVRIGSGIFGERPC  220 (222)
Q Consensus       159 GLMti~p~~~d~-----~~---~F~~l~~l~~~~--~~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~  220 (222)
                      |+||=-+..+++     ..   .|..+.+...+.  .....++.=|.-...--+..-+|||.|.++||-.|.
T Consensus       168 Gi~TH~a~ad~~~~~~~~~Q~~~F~~~~~~l~~~~~~~~~~~~~nS~~~~~~~~~~~d~vR~Gi~lYG~~p~  239 (384)
T 1xfc_A          168 GLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPV  239 (384)
T ss_dssp             EEECCC-----CCSHHHHHHHHHHHHHHHHHHHTTCCCSEEECBCHHHHHHCGGGCCSEECCSGGGGTCCSS
T ss_pred             EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHCCCEECCCCEECCCCC
T ss_conf             578767723788742679999999999987775089820445541366650942203653158201356677


No 6  
>3e5p_A Alanine racemase; ALR, PLP, SCP, isomerase, pyridoxal phosphate; HET: PLP EPE 2PE; 2.50A {Enterococcus faecalis} PDB: 3e6e_A*
Probab=99.46  E-value=2.8e-13  Score=109.22  Aligned_cols=206  Identities=15%  Similarity=0.148  Sum_probs=138.5

Q ss_pred             HHHHHHHHHHHHHHHCCCCHHHCEEEEECCC----CCHHHHHH-HHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             9999999999999981989644189987189----99999999-997298100012100011110000012587302302
Q gi|254780801|r    6 KLQVFKQKIENSAILAKRPKDSVSLVAVSKM----VDSKKIRV-ALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIG   80 (222)
Q Consensus         6 nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~----~~~e~I~~-~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG   80 (222)
                      |++.++.+++...++.   ++.++++||.|.    +....|.. +.++|++.||..+++|+.+=...-   .+...-..|
T Consensus        14 dl~al~~N~~~i~~~~---~~~~~i~aVVKanAYGhG~~~va~~l~~~Gi~~faVa~i~Ea~~LR~~g---~~~~ilvl~   87 (371)
T 3e5p_A           14 DTQAITENVQKECQRL---PEGTALFAVVKANGYGHGAVESAKAAKKGGATGFCVALLDEAIELREAG---VQDPILILS   87 (371)
T ss_dssp             CHHHHHHHHHHHHHSS---CSSSEEEEECHHHHHTTCHHHHHHHHHHTTCCCEEESSHHHHHHHHTTT---CCSCEEEEE
T ss_pred             EHHHHHHHHHHHHHHC---CCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCC---CCCCEEEEC
T ss_conf             6999999999999747---9989799999453464778999999998796999990999999999729---999478641


Q ss_pred             CCCCCHHHHHCCCCHHCCCCCCCCH-HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCC-CHHHHHHHHHHCCCCCCHH
Q ss_conf             4432001320111000012222200-1344333333114303688970046656346570-0012223443104311001
Q gi|254780801|r   81 SLQSNKVSEIVSLFDVIETVSREKT-ASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMP-NQTKDFVILCRQKYQLNVE  158 (222)
Q Consensus        81 ~LQsNKvk~i~~~~~~Ihsvds~~~-a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p-~el~~l~~~i~~~~~L~i~  158 (222)
                      ......+..++.+ +++.+|.+... ...++..+.+.+++.+|+|+|++|  .+|.||.+ +++.++++.+..++++.+.
T Consensus        88 ~~~~~~~~~~~~~-~l~~~i~s~~~~~~~l~~~a~~~~~~~~vhLkiDTG--M~RlG~~~~ee~~~~~~~~~~~~~l~~~  164 (371)
T 3e5p_A           88 VVDLAYVPLLIQY-DLSVTVATQEWLEAALQQLTPESNTPLRVHLKVDTG--MGRIGFLTPEETKQAVRFVQSHKEFLWE  164 (371)
T ss_dssp             ECCGGGHHHHHHH-TCEEEECCHHHHHHHHHHHCSCCSCCBCEEEEBCSS--SCSSSBCSSHHHHHHHHHHHHSTTBCCC
T ss_pred             CCCCHHHHHHHHC-CCEEEECCHHHHHHHHHHHHHHCCCCEEEEEEEECC--CCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf             5682057899737-966996409999999999987427764799999389--9867987478999999998741263330


Q ss_pred             HHEECCCCCCCCH-----HHHHHHHHHHHHCC--CCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCC
Q ss_conf             1101154334520-----58999999988758--94722477734899998089889971132389999
Q gi|254780801|r  159 GLMCIPPAMGNPK-----PHFYLLSEIARECK--LTKLSMGMTRDFELAIASGATSVRIGSGIFGERPC  220 (222)
Q Consensus       159 GLMti~p~~~d~~-----~~F~~l~~l~~~~~--~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~  220 (222)
                      |+||=-+..+++.     ..|..+.++.+.+.  ....+++=|.-.-.--+..-+|||+|.+|||-.|.
T Consensus       165 gi~tH~~~a~~~~~~~~~~q~~~f~~~~~~~~~~~~~~h~~nS~~~l~~~~~~~d~vR~Gi~lYG~~p~  233 (371)
T 3e5p_A          165 GIFTHFSTADEIDTSYFEKQAGRFKAVLAVLEELPRYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPS  233 (371)
T ss_dssp             EEECCCSCTTSSCCHHHHHHHHHHHTTSSSCSCCCSEEECBCHHHHHHCTTSSCSEEEECGGGGTCCTT
T ss_pred             CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCCCCCCCCCCHHHCCCCCC
T ss_conf             202100134566637899999999999986313663366417667645853357745159743188987


No 7  
>2vd8_A Alanine racemase; pyridoxal 5'-phosphate, peptidoglycan synthesis, PLP, OPPF, L-alanine, isomerase, D- alanine, pyridoxal phosphate; HET: MLY LLP; 1.47A {Bacillus anthracis} PDB: 2vd9_A* 3ha1_A*
Probab=99.46  E-value=6.6e-13  Score=106.67  Aligned_cols=205  Identities=17%  Similarity=0.146  Sum_probs=135.7

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHCEEEEECCC----CCHHHHH-HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECC
Q ss_conf             999999999999981989644189987189----9999999-99972981000121000111100000125873023024
Q gi|254780801|r    7 LQVFKQKIENSAILAKRPKDSVSLVAVSKM----VDSKKIR-VALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGS   81 (222)
Q Consensus         7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~----~~~e~I~-~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~   81 (222)
                      ++.++.+++...++.   ++.++++||.|.    +....|. .+.++|++.||-.+++|+.+=...-   .+...-..|+
T Consensus        18 l~al~~N~~~i~~~~---~~~~~i~aVVKanAYGhG~~~va~~l~~~Gi~~faVa~~~EA~~LR~~g---i~~~Ilvl~~   91 (391)
T 2vd8_A           18 LDAIYNNVTHIXEFI---PSDVEIFAVVKGNAYGHDYVPVAXIALEAGATRLAVAFLDEALVLRRAG---ITAPILVLGP   91 (391)
T ss_dssp             HHHHHHHHHHHHHHS---CTTCEEEEECHHHHHTTCHHHHHHHHHHTTCCEEEESSHHHHHHHHHTT---CCSCEEECSC
T ss_pred             HHHHHHHHHHHHHHC---CCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCC---CCCCEEEEEC
T ss_conf             999999999999747---9998799999150264788999999998698999991699999999719---9997799748


Q ss_pred             CCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCC-HHHHHHHHHHCCCCCCHHHH
Q ss_conf             43200132011100001222220013443333331143036889700466563465700-01222344310431100111
Q gi|254780801|r   82 LQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPN-QTKDFVILCRQKYQLNVEGL  160 (222)
Q Consensus        82 LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~-el~~l~~~i~~~~~L~i~GL  160 (222)
                      ....-+..++. .+.+-++.+...+..+...+ +.++++++.|.|+|+  .+|.||.|+ ++.+++..+..+++|++.|+
T Consensus        92 ~~~~~~~~~~~-~~~~~~i~s~~~l~~~~~~~-~~~~~~~vhlkiDTG--M~RlG~~~~~e~~~~~~~i~~~~~l~i~Gi  167 (391)
T 2vd8_A           92 SPPRDINVAAE-NDVALTVFQXEWVDEAIXLW-DGSSTMXYHINFDSG--MGRIGIRERXELXGFLXSLEGAPFLELEGV  167 (391)
T ss_dssp             CCGGGHHHHHH-TTEEEECCCHHHHHHHHHHC-CSSCCEEEEEEBCSS--CCSSSBCCHHHHHHHHHHHTTCTTEEEEEE
T ss_pred             CCHHHHHHHHH-CCCCEEECHHHHHHHHHHHH-HCCCCEEEEEEECCC--CCCCCCCCHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             88256556542-05320340599999999986-046864899996379--886788741468999999972899650367


Q ss_pred             EECCCCCCCC-----HHHHHHHHHHHH---HCC--CCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCCC
Q ss_conf             0115433452-----058999999988---758--947224777348999980898899711323899999
Q gi|254780801|r  161 MCIPPAMGNP-----KPHFYLLSEIAR---ECK--LTKLSMGMTRDFELAIASGATSVRIGSGIFGERPCQ  221 (222)
Q Consensus       161 Mti~p~~~d~-----~~~F~~l~~l~~---~~~--~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~~  221 (222)
                      ||==+..+++     ..++..+.++..   +..  ....++.-|.-.-.--+..-+|||+|.++||-.|..
T Consensus       168 ~THfa~ad~~~~~~~~~Q~~~F~~~~~~~~~~~~~~~~~h~anS~a~l~~~~~~~d~VR~Gi~lYG~~p~~  238 (391)
T 2vd8_A          168 YTHFATADEVETSYFDXQYNTFLEQLSWLXEFGVDPXFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSV  238 (391)
T ss_dssp             ECCCSSTTSSSCHHHHHHHHHHHHHHHHHHHTTCCCCSEECCCHHHHTTCTTCCTTEEEESTTTTTCCSCT
T ss_pred             EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCCCCCCEECCCCEECCCCCC
T ss_conf             61227677654056789999999999999862898320552276766467523577340682014777763


No 8  
>1vfs_A Alanine racemase; TIM-barrel, greek-KEY motief, isomerase; HET: KCX DCS; 1.90A {Streptomyces lavendulae} SCOP: b.49.2.2 c.1.6.1 PDB: 1vfh_A* 1vft_A*
Probab=99.45  E-value=1.1e-12  Score=105.29  Aligned_cols=205  Identities=15%  Similarity=0.126  Sum_probs=140.1

Q ss_pred             HHHHHHHHHHHHHHHCCCCHHHCEEEEECCC----CCHHHHH-HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             9999999999999981989644189987189----9999999-9997298100012100011110000012587302302
Q gi|254780801|r    6 KLQVFKQKIENSAILAKRPKDSVSLVAVSKM----VDSKKIR-VALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIG   80 (222)
Q Consensus         6 nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~----~~~e~I~-~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG   80 (222)
                      |++.++.+++...+.+   + ..+++||.|.    +....|. .+.++|++.||-.+++|+.+=.....   +...-..|
T Consensus        13 dl~ai~~N~~~ir~~~---~-~~~i~aVVKAnAYGhG~~~va~~l~~~Gi~~faVa~i~EA~~LR~~g~---~~~ilil~   85 (386)
T 1vfs_A           13 DLDAVRANVRALRARA---P-RSALMAVVKSNAYGHGAVPCARAAQEAGAAWLGTATPEEALELRAAGI---QGRIMCWL   85 (386)
T ss_dssp             EHHHHHHHHHHHHTTS---T-TSEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEESSHHHHHHHHHTTC---CSEEEECC
T ss_pred             EHHHHHHHHHHHHHHC---C-CCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCC---CCCEEEEE
T ss_conf             6999999999999768---9-983999992504638799999999986989999813999999997189---99858994


Q ss_pred             CCCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHH---HCCCCCCH
Q ss_conf             443200132011100001222220013443333331143036889700466563465700012223443---10431100
Q gi|254780801|r   81 SLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILC---RQKYQLNV  157 (222)
Q Consensus        81 ~LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i---~~~~~L~i  157 (222)
                      .....-++.++. .+.+-++.+...++.++..+.+.+++.+|.|+|+|+  .+|.||.|+|+.++++.+   ...++|++
T Consensus        86 ~~~~~~~~~~~~-~~~~~~i~s~~~l~~~~~~a~~~~~~~~vhlkiDTG--M~RlG~~~~e~~~~~~~~~~~~~~~~l~~  162 (386)
T 1vfs_A           86 WTPGGPWREAIE-TDIDVSVSGMWALDEVRAAARAAGRTARIQLKADTG--LGRNGCQPADWAELVGAAVAAQAEGTVQV  162 (386)
T ss_dssp             CCTTCCHHHHHH-TTCEEEECSHHHHHHHHHHHHHHTSCEEEEEEBCSS--CCSSSBCHHHHHHHHHHHHHHHHTTSEEE
T ss_pred             CCCCHHHHHHHH-HCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEECCC--CCCCCCCHHHHHHHHHHHHHHHCCCCEEE
T ss_conf             487058999986-073135475999999999998649982499995167--78678583788999999998621796427


Q ss_pred             HHHEEC-CCCCC-C-C--HHHHHHHHHH---HHH--CCCCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCC
Q ss_conf             111011-54334-5-2--0589999999---887--5894722477734899998089889971132389999
Q gi|254780801|r  158 EGLMCI-PPAMG-N-P--KPHFYLLSEI---ARE--CKLTKLSMGMTRDFELAIASGATSVRIGSGIFGERPC  220 (222)
Q Consensus       158 ~GLMti-~p~~~-d-~--~~~F~~l~~l---~~~--~~~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~  220 (222)
                      .|+||= +..++ + +  +.++..+.++   ..+  +.....+++-|.---.--+.--+|||+|.++||-.|.
T Consensus       163 ~Gi~TH~a~ad~~~~~~~~~Q~~~F~~~~~~l~~~~~~~~~~h~anS~~~l~~~~~~~d~vR~Gi~lYG~~p~  235 (386)
T 1vfs_A          163 TGVWSHFACADEPGHPSIRLQLDAFRDMLAYAEKEGVDPEVRHIANSPATLTLPETHFDLVRTGLAVYGVSPS  235 (386)
T ss_dssp             EEEECCCSSTTSTTCHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECHHHHHHCGGGCSSEEEECGGGGTCCSC
T ss_pred             EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCCCCCCCCCCCCEEEECCCCC
T ss_conf             9998644555775306789999999999999997178861565158632017840148742553154667767


No 9  
>1bd0_A Alanine racemase; isomerase, pyridoxal phosphate, alanine phosphonate; HET: IN5; 1.60A {Geobacillus stearothermophilus} SCOP: b.49.2.2 c.1.6.1 PDB: 1sft_A* 2sfp_A* 1l6g_A* 1niu_A* 1l6f_A* 1xql_A* 1xqk_A* 1epv_A* 1ftx_A*
Probab=99.42  E-value=3e-12  Score=102.29  Aligned_cols=205  Identities=17%  Similarity=0.143  Sum_probs=138.2

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHCEEEEECCC----CCHHHHHH-HHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECC
Q ss_conf             999999999999981989644189987189----99999999-9972981000121000111100000125873023024
Q gi|254780801|r    7 LQVFKQKIENSAILAKRPKDSVSLVAVSKM----VDSKKIRV-ALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGS   81 (222)
Q Consensus         7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~----~~~e~I~~-~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~   81 (222)
                      +..++.+++...+..   ++.++++||.|.    +....|.. +.++|++.||--+++|+.+=...-   .+...-..|+
T Consensus        14 l~al~~N~~~i~~~~---~~~~~i~aVVKanAYGhG~~~ia~~l~~~Gv~~faVa~~~EA~~LR~~g---i~~~ILvl~~   87 (388)
T 1bd0_A           14 LDAIYDNVENLRRLL---PDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKG---IEAPILVLGA   87 (388)
T ss_dssp             HHHHHHHHHHHHHHS---CTTCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEESSHHHHHHHHHTT---CCSCEEECSC
T ss_pred             HHHHHHHHHHHHHHC---CCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCC---CCCCEEEECC
T ss_conf             999999999999748---9989799999150264888999999998698999986799999999708---9985899617


Q ss_pred             CCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCH-HHHHHHHHHCCCCCCHHHH
Q ss_conf             432001320111000012222200134433333311430368897004665634657000-1222344310431100111
Q gi|254780801|r   82 LQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQ-TKDFVILCRQKYQLNVEGL  160 (222)
Q Consensus        82 LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~e-l~~l~~~i~~~~~L~i~GL  160 (222)
                      ....-...++. .+...+|.+...++.+... .+.+.+++|+|+||++  .+|.||.|+| +..++..+..+++|++.|+
T Consensus        88 ~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~-~~~~~~~~vhLkiDTG--M~RlG~~~~e~~~~~~~~i~~~~~l~~~Gi  163 (388)
T 1bd0_A           88 SRPADAALAAQ-QRIALTVFRSDWLEEASAL-YSGPFPIHFHLKMDTG--MGRLGVKDEEETKRIVALIERHPHFVLEGL  163 (388)
T ss_dssp             CCGGGHHHHHH-TTEEEEECCHHHHHHHHHH-CCCSSCEEEEEEBCSS--SCSSSBCSHHHHHHHHHHHHHSTTEEEEEE
T ss_pred             CCHHHHHHHHH-CCCCCCCCCHHHHHHHHHH-HHCCCCEEEEEEEECC--CCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             88689999873-2666420629999988887-6158863899998168--886787827899999999985899616789


Q ss_pred             EECCCCCCCC-----HHHHHHHHHHHHHCC--CCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCCC
Q ss_conf             0115433452-----058999999988758--947224777348999980898899711323899999
Q gi|254780801|r  161 MCIPPAMGNP-----KPHFYLLSEIARECK--LTKLSMGMTRDFELAIASGATSVRIGSGIFGERPCQ  221 (222)
Q Consensus       161 Mti~p~~~d~-----~~~F~~l~~l~~~~~--~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~~  221 (222)
                      ||-=+..+++     ...|..+..+.+...  ....|++=|.-.-.--+..-++||+|.++||-.|..
T Consensus       164 ~tH~a~ad~~~~~~~~~q~~~~~~~~~~~~~~~~~~h~anS~~~l~~~~~~~d~vR~Gi~lyG~~p~~  231 (388)
T 1bd0_A          164 YTHFATADEVNTDYFSYQYTRFLHMLEWLPSRPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSP  231 (388)
T ss_dssp             ECCCSSTTSSCCHHHHHHHHHHHHHHTTCSSCCSEEECCCHHHHHHCTTSCTTEEEECGGGGTCCSCG
T ss_pred             EECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCEECCEEEEECCCCC
T ss_conf             70246732235288999999999999975324540666256777539502376041336888437776


No 10 
>3llx_A Predicted amino acid aldolase or racemase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: LLP TRS; 1.50A {Idiomarina loihiensis}
Probab=99.41  E-value=2.7e-13  Score=109.28  Aligned_cols=204  Identities=14%  Similarity=0.082  Sum_probs=140.5

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHH-HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCC
Q ss_conf             9999999999999819896441899871899999999-999729810001210001111000001258730230244320
Q gi|254780801|r    7 LQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIR-VALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSN   85 (222)
Q Consensus         7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~-~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsN   85 (222)
                      ++.++.+++.-...++  +..+.|.+|.|++..-+|. .+.++|.+.|+-..+.|++.-...--+  +  ..+..++.-.
T Consensus        21 l~~l~~N~~~~~~~~~--~~~~~l~~~vK~h~~~~ia~~l~~~G~~~~~va~~~Ea~~l~~~g~~--~--~l~~~~~~~~   94 (376)
T 3llx_A           21 EAKLKSNINYLKQRVE--SLGSHLRPHLKTLRTLEAAGYLLDSKSAPATVSTLAEAEAYAKAGYT--D--LLYAVGIAPA   94 (376)
T ss_dssp             HHHHHHHHHHHHHHHH--HTTCCBCCBCTTTCBHHHHHHHCSSTTSCEEESSHHHHHHHHHTTCC--E--EEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHHH--HCCCEEEEEEECCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCC--C--EEEECCCCCH
T ss_conf             9999999999998653--55983999964137999999999789998998059999999967998--6--6981467805


Q ss_pred             HHHHHCCC----CHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHE
Q ss_conf             01320111----00001222220013443333331143036889700466563465700012223443104311001110
Q gi|254780801|r   86 KVSEIVSL----FDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQKYQLNVEGLM  161 (222)
Q Consensus        86 Kvk~i~~~----~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLM  161 (222)
                      +...+...    ....-.+|+...++.+++.+.+.+++.+|+|+|+++  ..|.|+.|++  +++..+...+++++.|+|
T Consensus        95 ~~~~~~~l~~~~~~~~~~vds~~~~~~l~~~a~~~~~~~~v~l~iD~G--~~R~G~~~~~--~~~~~~~~~~~l~~~Gi~  170 (376)
T 3llx_A           95 KLKRVAALRQQGINLHILLDNITQAQAVVDYAAEFGQDFSVFIEIDSD--DHRGGIKPSD--SKLLTIAKTLGEHFTGLM  170 (376)
T ss_dssp             GHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCCCEEEEEBCSS--SSSSCBCTTC--THHHHHHHHHGGGEEEEE
T ss_pred             HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEEECC--CCCCCCCHHH--HHHHHHCCCCCCCCCCCC
T ss_conf             679999987348748999777999999999998749825899875058--8757789059--999973012110003310


Q ss_pred             ECCCCCC---C--C-----HHH---HHHHHHHHHH--CCCCEECCCCCHHHHHHHHH-CCCEEEECHHHCCCCCC
Q ss_conf             1154334---5--2-----058---9999999887--58947224777348999980-89889971132389999
Q gi|254780801|r  162 CIPPAMG---N--P-----KPH---FYLLSEIARE--CKLTKLSMGMTRDFELAIAS-GATSVRIGSGIFGERPC  220 (222)
Q Consensus       162 ti~p~~~---d--~-----~~~---F~~l~~l~~~--~~~~~LSmGMS~D~~~Ai~~-Gst~vRiGs~iFG~R~~  220 (222)
                      +.+....   +  .     +..   |....+....  +....+|+|.|..|....+. |-|.+|+|+.+|+..+|
T Consensus       171 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~s~g~t~~~~~~~~~~~i~~lr~G~~~~~d~~~  245 (376)
T 3llx_A          171 THAGGSYACNTEQGLKNFAKQECDAVRIARNNLETAGIHCAITSVGSTPTAHFGEDFSDISEVRAGVYTTFDLVM  245 (376)
T ss_dssp             CCCGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEECCHHHHHHCSCCTTCSEECCCGGGTCCHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCCCCCEEECCCCCCCCCHHH
T ss_conf             233312456987899999999999999987557644998518981797046564037885375654402368666


No 11 
>1rcq_A Catabolic alanine racemase DADX; alpha-beta barrel, beta-structure for C-terminal domain, internal/external aldimine forms, isomerase; HET: KCX PLP DLY; 1.45A {Pseudomonas aeruginosa} SCOP: b.49.2.2 c.1.6.1 PDB: 2odo_A*
Probab=99.39  E-value=3.6e-12  Score=101.76  Aligned_cols=187  Identities=16%  Similarity=0.128  Sum_probs=131.3

Q ss_pred             HCEEEEECCC----CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCCCCHHCCCCCC
Q ss_conf             4189987189----999999999972981000121000111100000125873023024432001320111000012222
Q gi|254780801|r   27 SVSLVAVSKM----VDSKKIRVALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVSLFDVIETVSR  102 (222)
Q Consensus        27 ~v~LiaVtK~----~~~e~I~~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~~~~~Ihsvds  102 (222)
                      ..+++||.|-    +....|..+++.|++.||--.++|+.+=...-.+  ....-+-|.....-...+.. .+.+-++++
T Consensus        25 ~~ki~aVVKanAYGhG~~~ia~~L~~g~~~faVa~~~Ea~~LR~~g~~--~~il~l~~~~~~~~~~~~~~-~~i~~~i~s  101 (357)
T 1rcq_A           25 GARALAVIKADAYGHGAVRCAEALAAEADGFAVACIEEGLELREAGIR--QPILLLEGFFEASELELIVA-HDFWCVVHC  101 (357)
T ss_dssp             CSEEEEECHHHHHTTCHHHHHHHHTTTCSEEEESSHHHHHHHHHTTCC--SCEEETTCCSSGGGHHHHHH-TTEEEEECS
T ss_pred             CCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCC--CCEECCCCCCCHHHHHHHHH-HCCCCCCCH
T ss_conf             994999996653538799999999956997999899999999970996--42011001355778898886-314656587


Q ss_pred             CCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEECCCCCCCC-----HHHHHHH
Q ss_conf             20013443333331143036889700466563465700012223443104311001110115433452-----0589999
Q gi|254780801|r  103 EKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCIPPAMGNP-----KPHFYLL  177 (222)
Q Consensus       103 ~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMti~p~~~d~-----~~~F~~l  177 (222)
                      ...++.+++.  ..+++++|.|.|+||  .+|.||.++|+.+++..+...+++.+.|+||--+..+++     ...|..+
T Consensus       102 ~~~~~~l~~~--~~~~~~~vhLkvDTG--M~RlG~~~~e~~~~~~~~~~~~~~~~~gi~tH~a~ad~~~~~~~~~q~~~f  177 (357)
T 1rcq_A          102 AWQLEAIERA--SLARPLNVWLKMDSG--MHRVGFFPEDFRAAHERLRASGKVAKIVMMSHFSRADELDCPRTEEQLAAF  177 (357)
T ss_dssp             HHHHHHHHHC--CCSSCEEEEEEBCSS--SCSSSBCHHHHHHHHHHHHHTTCEEEEEEECCCSSTTCTTCTHHHHHHHHH
T ss_pred             HHHHHHHHHH--CCCCCEEEEEEECCC--CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf             9999999974--636643699997267--643356837888889998641454403456530335562036799999999


Q ss_pred             HHHHHHCCCCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCCC
Q ss_conf             99988758947224777348999980898899711323899999
Q gi|254780801|r  178 SEIARECKLTKLSMGMTRDFELAIASGATSVRIGSGIFGERPCQ  221 (222)
Q Consensus       178 ~~l~~~~~~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~~  221 (222)
                      ..+.+.. ....|+.-|.-.-..-+..-+|||+|.++||-.|..
T Consensus       178 ~~~~~~~-~~~~h~aNS~~~l~~~~~~~d~vR~Gi~lYG~~p~~  220 (357)
T 1rcq_A          178 SAASQGL-EGEISLRNSPAVLGWPKVPSDWVRPGILLYGATPFE  220 (357)
T ss_dssp             HHHHTTC-CSCEECCCHHHHHHCTTSCCSEECCCGGGGTCCSSS
T ss_pred             HHHHHHC-CCCCCCCCCHHHHCCCCCCCCEECCCCCCCCCCCCC
T ss_conf             9987511-332114683988548402486246672014567874


No 12 
>2dy3_A Alanine racemase; alpha/beta barrel, isomerase; HET: PLP; 2.10A {Corynebacterium glutamicum}
Probab=99.36  E-value=8.3e-12  Score=99.31  Aligned_cols=203  Identities=16%  Similarity=0.152  Sum_probs=127.6

Q ss_pred             HHHHHHHHHHHHHHHCCCCHHHCEEEEECC----CCCHHHHH-HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             999999999999998198964418998718----99999999-9997298100012100011110000012587302302
Q gi|254780801|r    6 KLQVFKQKIENSAILAKRPKDSVSLVAVSK----MVDSKKIR-VALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIG   80 (222)
Q Consensus         6 nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK----~~~~e~I~-~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG   80 (222)
                      ||..++.+++...+.+    ...+++||.|    ++....|. .+.++|++.||--+++|+.+=.....   +...-..|
T Consensus         9 dL~al~~N~~~i~~~~----~~~~i~aVVKAnAYGhG~~~va~~l~~~Gv~~faVa~~~Ea~~LR~~g~---~~~Ilil~   81 (361)
T 2dy3_A            9 DLDAIAHNTRVLKQMA----GPAKLMAVVKANAYNHGVEKVAPVIAAHGADAFGVATLAEAMQLRDIGI---SQEVLCWI   81 (361)
T ss_dssp             CHHHHHHHHHHHHHHH----TTSEEEEECHHHHHHTCHHHHHHHHHHTTCCEEEESSHHHHHHHHHTTC---CSEEEECC
T ss_pred             EHHHHHHHHHHHHHHC----CCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCC---CCCEEEEC
T ss_conf             5999999999998567----9984999994554637899999999986949999832999999997389---99768755


Q ss_pred             CCCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHH
Q ss_conf             44320013201110000122222001344333333114303688970046656346570001222344310431100111
Q gi|254780801|r   81 SLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQKYQLNVEGL  160 (222)
Q Consensus        81 ~LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~~~L~i~GL  160 (222)
                      .......+.++.+ +.+-++.+...+..+.   ...++..+|.|+|+|+  .+|.||.++|+.+++..+..++++++.|+
T Consensus        82 ~~~~~~~~~~~~~-~~~~~v~s~~~~~~~~---~~~~~~~~vhLkvDTG--M~RlG~~~~e~~~~~~~~~~~~~l~~~gi  155 (361)
T 2dy3_A           82 WTPEQDFRAAIDR-NIDLAVISPAHAKALI---ETDAEHIRVSIKIDSG--LHRSGVDEQEWEGVFSALAAAPHIEVTGM  155 (361)
T ss_dssp             CCTTSCHHHHHTT-TCEEEECSHHHHHHHH---TSCCSCEEEEEEBCCS--SCSSSBCHHHHHHHHHHHHTCTTEEEEEE
T ss_pred             CCCHHHHHHHHHH-CCCEEECCHHHHHHHH---HHHCCCCEEEEEECCC--CCCCCCCHHHHHHHHHHHHHCCCCCEECC
T ss_conf             8874889999972-7741550289989999---9727886499998789--97679897999998999874356113201


Q ss_pred             EECCCCCCCC-----HH---HHHHHHHHHHHCC--CCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCCC
Q ss_conf             0115433452-----05---8999999988758--947224777348999980898899711323899999
Q gi|254780801|r  161 MCIPPAMGNP-----KP---HFYLLSEIARECK--LTKLSMGMTRDFELAIASGATSVRIGSGIFGERPCQ  221 (222)
Q Consensus       161 Mti~p~~~d~-----~~---~F~~l~~l~~~~~--~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~~  221 (222)
                      ||=-+..+++     ..   .|..+-+...+..  ....++.-|.-.-.--+.--+|||+|.++||-.|..
T Consensus       156 ~tH~a~ad~~d~~~~~~Q~~~F~~~~~~l~~~~~~~~~~h~anS~~~~~~~~~~~d~vR~Gi~lYG~~~~~  226 (361)
T 2dy3_A          156 FTHLACADEPENPETDRQIIAFRRALALARKHGLECPVNHVCNSPAFLTRSDLHMEMVRPGLAFYGLEPVA  226 (361)
T ss_dssp             ECCCC--------CHHHHHHHHHHHHHHHHHTTCCCCSCBCCCHHHHHHCGGGCTTEECCCGGGGTCCSST
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHCCCHHCCCEEECCEEEECCCCCC
T ss_conf             23540468765526899999999999998752786405565153666539410166230140476667775


No 13 
>3co8_A Alanine racemase; protein structure initiative II, PSI-II, NYSGXRC, PLP, TIM barrel, structural genomics; HET: PLP; 1.70A {Oenococcus oeni psu-1}
Probab=99.32  E-value=3.5e-11  Score=95.06  Aligned_cols=203  Identities=14%  Similarity=0.161  Sum_probs=130.6

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHCEEEEECCC----CCHHHHHH-HHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECC
Q ss_conf             999999999999981989644189987189----99999999-9972981000121000111100000125873023024
Q gi|254780801|r    7 LQVFKQKIENSAILAKRPKDSVSLVAVSKM----VDSKKIRV-ALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGS   81 (222)
Q Consensus         7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~----~~~e~I~~-~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~   81 (222)
                      ++.++.+++...+.++    ..+++||-|.    +....|.. +.++|++.||--+++|+.+=....   .+...-..|+
T Consensus        16 l~al~~N~~~ir~~~~----~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~LR~~g---i~~~Ilvl~~   88 (380)
T 3co8_A           16 KSSLAYNVQYTKQVSG----AKTLWLAVKSNAYGHGLLQVSKIARECGVDGLAVSVLDEGIAIRQAG---IDDFILILGP   88 (380)
T ss_dssp             HHHHHHHHHHHHHHHC----CSEEEEECHHHHHTTCHHHHHHHHGGGTCCEEEESSHHHHHHHHHTT---CCCCEEECSC
T ss_pred             HHHHHHHHHHHHHHCC----CCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCC---CCCCEEEEEC
T ss_conf             9999999999985579----98499999743464789999999998697999991999999999739---9983899725


Q ss_pred             CCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCC-HHHHHHHHHHC-CCCCCHHH
Q ss_conf             43200132011100001222220013443333331143036889700466563465700-01222344310-43110011
Q gi|254780801|r   82 LQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPN-QTKDFVILCRQ-KYQLNVEG  159 (222)
Q Consensus        82 LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~-el~~l~~~i~~-~~~L~i~G  159 (222)
                      +...-...++. .+++-+|.+...++.+++.+.  +++++|.|+|++|  .+|.||.|+ ++.++++.+.+ .+++++.|
T Consensus        89 ~~~~~~~~~~~-~~l~~~i~s~~~l~~l~~~~~--~~~~~VhLkiDTG--M~RlG~~~~~~~~~~~~~l~~~~~~l~~~G  163 (380)
T 3co8_A           89 IDVKYAPIASK-YHFLTTVSSLDWLKSADKILG--KEKLSVNLAVDTG--MNRIGVRSKKDLKDEIEFLQEHSDHFSYDG  163 (380)
T ss_dssp             CCGGGHHHHHH-TTCEEEECCHHHHHHHHHHCT--TCCEEEEEEBCSS--SCSSSBCSHHHHHHHHHHHHHCTTTEEEEE
T ss_pred             CCHHHHHHHHH-HCCCCCCCCHHHHHHHHHHHC--CCCCEEEEEEECC--CCCCCCCCHHHHHHHHHHHHHHCCCCCCCE
T ss_conf             42123368887-253100024999999999734--6884389998268--986777734678999999764113544002


Q ss_pred             HEECCCCCCCC-----HHHHHHHHHHHHHCCCCEE-CCCCCHHHHHHHH---HCCCEEEECHHHCCCCCCC
Q ss_conf             10115433452-----0589999999887589472-2477734899998---0898899711323899999
Q gi|254780801|r  160 LMCIPPAMGNP-----KPHFYLLSEIARECKLTKL-SMGMTRDFELAIA---SGATSVRIGSGIFGERPCQ  221 (222)
Q Consensus       160 LMti~p~~~d~-----~~~F~~l~~l~~~~~~~~L-SmGMS~D~~~Ai~---~Gst~vRiGs~iFG~R~~~  221 (222)
                      +||--+..+++     ..++..+.++.+.+....+ ++-.|+---....   ..-+|||+|.+|||-.|.+
T Consensus       164 i~SHfa~ad~~~~~~~~~q~~~f~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~d~vR~Gi~lYG~~p~~  234 (380)
T 3co8_A          164 IFTHFASSDNPDDHYFQRQKNRWYELIDGLIMPRYVHVMNSGAAMYHSKELPGCNSIARVGTVVYGVEPSE  234 (380)
T ss_dssp             EECCCC---------CHHHHHHHHHHHTTSCCCSEEECBCHHHHHHCGGGCTTSCSEEEESTTTTTCCTTT
T ss_pred             EEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHCCCHHCCCCCCCCCCCCEEECCCCCC
T ss_conf             66202366777647889999999999974357531455331656358111564322346772224567874


No 14 
>3oo2_A Alanine racemase 1; infectious diseases, center for structural of infectious diseases (csgid); 2.37A {Staphylococcus aureus subsp}
Probab=99.24  E-value=6.4e-11  Score=93.34  Aligned_cols=204  Identities=19%  Similarity=0.242  Sum_probs=132.8

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHCEEEEECCC----CCHHHHH-HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECC
Q ss_conf             999999999999981989644189987189----9999999-99972981000121000111100000125873023024
Q gi|254780801|r    7 LQVFKQKIENSAILAKRPKDSVSLVAVSKM----VDSKKIR-VALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGS   81 (222)
Q Consensus         7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~----~~~e~I~-~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~   81 (222)
                      ++.++.+++...+.++    ..+++||.|-    +....|. .++++|++.||--+++|+.+=...   ..+...-..|.
T Consensus        18 l~al~~N~~~ir~~~~----~~~i~aVVKAnAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~LR~~---gi~~~Ilvl~~   90 (385)
T 3oo2_A           18 LNAVASNFKVFSTLHP----NKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIELRMH---GITAKILVLGV   90 (385)
T ss_dssp             HHHHHHHHHHHHHHST----TSEEEEECHHHHHTTCHHHHHHHHHHTTCCEEEESSHHHHHHHHTT---TCCSEEEECSC
T ss_pred             HHHHHHHHHHHHHHCC----CCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHC---CCCCCEEEECC
T ss_conf             9999999999995589----9859999966036488999999999869799999089999999966---99985576156


Q ss_pred             CCCCHHHHHCCCCHHCCCCCCCCHHHH-HHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCH-HHHHHHHHHCCCCCCHHH
Q ss_conf             432001320111000012222200134-433333311430368897004665634657000-122234431043110011
Q gi|254780801|r   82 LQSNKVSEIVSLFDVIETVSREKTASL-LSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQ-TKDFVILCRQKYQLNVEG  159 (222)
Q Consensus        82 LQsNKvk~i~~~~~~Ihsvds~~~a~~-L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~e-l~~l~~~i~~~~~L~i~G  159 (222)
                      +...-...++.+ +..-++.+...+.. ++..+.+.+++++|.|+|++|  .+|.||.|+| +.++++.+..+++|++.|
T Consensus        91 ~~~~e~~~~~~~-~l~~~i~~~~~l~~~~~~~~~~~~~~~~vhLkiDTG--M~RlG~~~~e~~~~~~~~~~~~~~l~i~G  167 (385)
T 3oo2_A           91 LPAKDIDKAIQH-RVALTVPSKQWLKEAIKNISGEQEKKLWLHIKLDTG--MGRLGIKDTKTYQEVIEIIQQYEQLVFEG  167 (385)
T ss_dssp             CCGGGHHHHHHT-TEEEEECCHHHHHHHHHTCCSSCCSCEEEEEEBCCS--SCCSSBCSHHHHHHHHHHHTTCTTEEEEE
T ss_pred             CCHHHHHHHHHH-HHHCEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCC--CCCCCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf             662669999973-100144146666789999876348963799997578--87678883678999999975357457888


Q ss_pred             HEECCCCCCCC----HHHHHHHHHHHHHC-CCCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCC
Q ss_conf             10115433452----05899999998875-894722477734899998089889971132389999
Q gi|254780801|r  160 LMCIPPAMGNP----KPHFYLLSEIAREC-KLTKLSMGMTRDFELAIASGATSVRIGSGIFGERPC  220 (222)
Q Consensus       160 LMti~p~~~d~----~~~F~~l~~l~~~~-~~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~  220 (222)
                      +||==+..+++    ...+..+.++.... .....++--|.---.--+.-.++||.|.++||--|.
T Consensus       168 i~SH~a~ad~~~~~~~~q~~~f~~~~~~~~~~~~~h~anS~~~~~~~~~~~d~vR~Gi~lyG~~p~  233 (385)
T 3oo2_A          168 VFTHFACADEPGDMTTEQYQRFKDMVNEAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPS  233 (385)
T ss_dssp             EECCCSSTTSSSSHHHHHHHHHHHHHHTSCCCSEEEEECHHHHHHCCCTTCCEECCCGGGGTCCSS
T ss_pred             EEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHCCCHHHCCEECCCEEEECCCCC
T ss_conf             986013344332044899999988765226865200124375655827655602342799865675


No 15 
>3gwq_A D-serine deaminase; YP_556991.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.00A {Burkholderia xenovorans LB400}
Probab=99.24  E-value=4e-11  Score=94.73  Aligned_cols=200  Identities=11%  Similarity=0.120  Sum_probs=138.3

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHH-HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEE--
Q ss_conf             89999999999999999819896441899871899999999-999729810001210001111000001258730230--
Q gi|254780801|r    3 LGNKLQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIR-VALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFI--   79 (222)
Q Consensus         3 i~~nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~-~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfI--   79 (222)
                      |.+|++.+++...         ...+++-++.|++..-+|. .+.++|..-|+-..++|++.-...     .+..=++  
T Consensus        56 l~~Ni~~m~~~~~---------~~gv~lrph~Kth~s~~va~~~l~~Ga~g~~vatl~Ea~~l~~~-----Gi~~illa~  121 (426)
T 3gwq_A           56 VEHNLKWMQAFVA---------EYGVKLAPHGKTTMAPQLFRRQLETGAWGITLATAHQVRAAYHG-----GVSRVLMAN  121 (426)
T ss_dssp             HHHHHHHHHHHHH---------HHCCEECCBCTTTCCHHHHHHHHHTTCCCEEESSHHHHHHHHHT-----TCCEEEECS
T ss_pred             HHHHHHHHHHHHH---------HCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHC-----CCCCEEEEC
T ss_conf             9999999999887---------56974999811146499999999779987998609999999976-----999879946


Q ss_pred             CCCCCCHHHHHCCC-----CHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCC-CCHHHHHHHHHHCCC
Q ss_conf             24432001320111-----000012222200134433333311430368897004665634657-000122234431043
Q gi|254780801|r   80 GSLQSNKVSEIVSL-----FDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIM-PNQTKDFVILCRQKY  153 (222)
Q Consensus        80 G~LQsNKvk~i~~~-----~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~-p~el~~l~~~i~~~~  153 (222)
                      +...+.+++.+..+     ...+-+|||...++.|++.+.+.+++++|+|+|+++  ..|.|+. ++++.++++.+.+.+
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~i~~~vds~~~l~~l~~~a~~~~~~~~V~i~vDtG--~~R~G~~~~e~~~~l~~~i~~~~  199 (426)
T 3gwq_A          122 QLVGRRNMMMVAELLSDPEFEFFCLVDSVEGVEQLGEFFKSVNKQLQVLLELGVP--GGRTGVRDAAQRNAVLEAITRYP  199 (426)
T ss_dssp             CCCSHHHHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCCEEEEEEECCT--TSSSSBCSHHHHHHHHHHHHTST
T ss_pred             CCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEEEECCCC--CCCCCCCCHHHHHHHHHHHHHCC
T ss_conf             7789799999999863557405999878999999999887568068987650567--76566666589999999998577


Q ss_pred             -CCCHHHHEECCCCCCCC---HHHHH----HHHHHHHHCC----CCEECCCCCHHHHHHHHH---------CCCEEEECH
Q ss_conf             -11001110115433452---05899----9999988758----947224777348999980---------898899711
Q gi|254780801|r  154 -QLNVEGLMCIPPAMGNP---KPHFY----LLSEIARECK----LTKLSMGMTRDFELAIAS---------GATSVRIGS  212 (222)
Q Consensus       154 -~L~i~GLMti~p~~~d~---~~~F~----~l~~l~~~~~----~~~LSmGMS~D~~~Ai~~---------Gst~vRiGs  212 (222)
                       ++.+.|+|+-.....+.   .+.+.    .++.+.+...    ...+|.|-|.-|..+...         +.++||.|+
T Consensus       200 ~~l~l~Gi~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ggs~~~~~~~~~~~~~~~~~~~~~~vrpG~  279 (426)
T 3gwq_A          200 DTLKLAGVELYEGVLKEEHEVREFLQSAVAVTRELVEQERFARAPAVLSGAGSAWYDVVAEEFVKASETGKVEVVLRPGC  279 (426)
T ss_dssp             TTEEEEEEEECGGGCCSHHHHHHHHHHHHHHHHHHHHHTCCSSSSEEEEECCSTTHHHHHHHTHHHHHSSSEEEEECCCC
T ss_pred             CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHCCCCCCCCCCCCCEEEECCEE
T ss_conf             88656699851533477343999999999999999998532788704644688540100331002556764026973447


Q ss_pred             HHCCCC
Q ss_conf             323899
Q gi|254780801|r  213 GIFGER  218 (222)
Q Consensus       213 ~iFG~R  218 (222)
                      .+|+..
T Consensus       280 ~l~~D~  285 (426)
T 3gwq_A          280 YLTHDV  285 (426)
T ss_dssp             SSSSCS
T ss_pred             EEEECC
T ss_conf             997046


No 16 
>3hur_A Alanine racemase; structural genomics, isomerase, pyridoxal phosphate, PSI-2, protein structure initiative; 2.50A {Oenococcus oeni psu-1}
Probab=99.24  E-value=1.9e-10  Score=90.11  Aligned_cols=201  Identities=13%  Similarity=0.121  Sum_probs=128.0

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHCEEEEECCC----CCHHHHHH-HHH-CCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             999999999999981989644189987189----99999999-997-298100012100011110000012587302302
Q gi|254780801|r    7 LQVFKQKIENSAILAKRPKDSVSLVAVSKM----VDSKKIRV-ALS-CGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIG   80 (222)
Q Consensus         7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~----~~~e~I~~-~~~-~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG   80 (222)
                      +..++.+++...+.++    ..+++||.|.    +....|.. +.+ .|.+.||-.+++|+.+=...   ..+...-..|
T Consensus        16 l~al~~N~~~ir~~~~----~~~i~aVVKanAYGhG~~~va~~l~e~~g~d~faVa~ieEa~~LR~~---g~~~~Ilvl~   88 (395)
T 3hur_A           16 LDAAAHNLQEIREWTK----AKKVYAVLKADGYGLGAIPLAKAFQETASADALIVSNLDEALELRQA---DLTLPIWVLG   88 (395)
T ss_dssp             HHHHHHHHHHHHHHHT----CSEEEEECCHHHHHTCHHHHHHHHHHTTCCSEEEESCHHHHHHHHHT---TCCSCEEESS
T ss_pred             HHHHHHHHHHHHHHCC----CCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHC---CCCCEEEEEC
T ss_conf             9999999999996689----98599999662264888999999998789999999299999999966---9998399966


Q ss_pred             CCCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCH-HHHHHHHHHCCCCCCHHH
Q ss_conf             4432001320111000012222200134433333311430368897004665634657000-122234431043110011
Q gi|254780801|r   81 SLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQ-TKDFVILCRQKYQLNVEG  159 (222)
Q Consensus        81 ~LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~e-l~~l~~~i~~~~~L~i~G  159 (222)
                      +....-+..+++ .+.+.+|.+...++.+.    +.++..+|.|.|+++  .+|.||.+++ +..+.+.+..++++++.|
T Consensus        89 ~~~~~e~~~~~~-~~l~~~i~s~~~l~~~~----~~~~~~~vhlkiDTG--M~RlG~~~~d~~~~~~~~~~~~~~l~l~G  161 (395)
T 3hur_A           89 AWDYSDLKLFID-HDIVITIPSLAWLQNLP----DFEGTLKVSLAIDTG--MTRIGFDKADEISAAKKIIDKNPQLDLFS  161 (395)
T ss_dssp             CCCGGGHHHHHH-TTEEEEECCHHHHHTCC----CCSSCEEEEEEBCCS--SCSSSBCCHHHHHHHHHHHHHCTTEEEEE
T ss_pred             CCCHHHHHHHHH-HHHCCCCCHHHHHHHHH----HHCCCCEEEEEECCC--CCCCCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf             889799999998-43234300688886667----516873599998178--88789880678999999998568862799


Q ss_pred             HEECCCCCCCC--------HHHHHHHHHHHHHCC--CCEECCCCCHHHHHH---HHHCCCEEEECHHHCCCCCCC
Q ss_conf             10115433452--------058999999988758--947224777348999---980898899711323899999
Q gi|254780801|r  160 LMCIPPAMGNP--------KPHFYLLSEIARECK--LTKLSMGMTRDFELA---IASGATSVRIGSGIFGERPCQ  221 (222)
Q Consensus       160 LMti~p~~~d~--------~~~F~~l~~l~~~~~--~~~LSmGMS~D~~~A---i~~Gst~vRiGs~iFG~R~~~  221 (222)
                      +||=-+..+++        ...|..+.++....+  ....|+.-|.-.-.-   -+..-+|||.|.+|||-.|..
T Consensus       162 i~SHla~ad~~~~~~~~~~~~q~~~f~~~~~~~~~~~~~~h~~nSa~~l~~~~~p~~~~d~vR~Gi~lYG~~p~~  236 (395)
T 3hur_A          162 VYTHFATADEAGEKSKAYFEEQLRRWQELTINQGFDPSLFSMANSATCIWHHDDPRISFAAIRPGQLISGVNVSN  236 (395)
T ss_dssp             EECCCTTTTSCSHHHHHHHHHHHHHHHHHHTTSCCCGGGEECCCHHHHHHTTTCTTSCCSEECCCGGGGTCCTTT
T ss_pred             EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCCCCEEEECCCCCCCCCCC
T ss_conf             976114666334211689999999999999845998426651240446632577010463475112013666775


No 17 
>2rjg_A Alanine racemase; alpha/beta barrel, cell shape, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis, pyridoxal phosphate; HET: KCX PLP; 2.40A {Escherichia coli} PDB: 2rjh_A* 3b8v_A* 3b8u_A* 3b8t_A* 3b8w_A*
Probab=99.11  E-value=9.5e-10  Score=85.43  Aligned_cols=199  Identities=19%  Similarity=0.203  Sum_probs=125.3

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECC----CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEE
Q ss_conf             899999999999999998198964418998718----9999999999972981000121000111100000125873023
Q gi|254780801|r    3 LGNKLQVFKQKIENSAILAKRPKDSVSLVAVSK----MVDSKKIRVALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRF   78 (222)
Q Consensus         3 i~~nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK----~~~~e~I~~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHf   78 (222)
                      |++|++.|++       .+    +..+++||-|    ++....|..++ .|...||--.+.|+.+=.....+. + .+-+
T Consensus        33 l~~N~~~ir~-------~~----~~~~i~aVVKAnAYGhG~~~va~~l-~~~~~faVa~~~EA~~LR~~gi~~-~-ilil   98 (379)
T 2rjg_A           33 LRHNLQRLRE-------LA----PASKMVAVVKANAYGHGLLETARTL-PDADAFGVARLEEALRLRAGGITK-P-VLLL   98 (379)
T ss_dssp             HHHHHHHHHH-------HS----TTSEEEEECHHHHHTTCHHHHHHHC-TTCSEEEESSHHHHHHHHHTTCCS-C-EEET
T ss_pred             HHHHHHHHHH-------HC----CCCEEEEEEEECCCCCCHHHHHHHH-HCCCEEEEEEHHHHHHHHHHCCCC-C-EECC
T ss_conf             9999999996-------68----9986999996452638789999999-609989993999999999748998-6-2103


Q ss_pred             ECCCCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCC-CCCH
Q ss_conf             024432001320111000012222200134433333311430368897004665634657000122234431043-1100
Q gi|254780801|r   79 IGSLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQKY-QLNV  157 (222)
Q Consensus        79 IG~LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~~-~L~i  157 (222)
                      -|..-..-...+ ...+..-+|.+...++.+.+.  ..+++.+|.|.|+++  .+|.||.|+|+..++..+..++ ++.+
T Consensus        99 ~~~~~~~~~~~~-~~~~i~~~i~s~~~l~~~~~~--~~~~~~~vhlkiDTG--M~RlG~~~~e~~~~~~~~~~~~~~l~~  173 (379)
T 2rjg_A           99 EGFFDARDLPTI-SAQHFHTAVHNEEQLAALEEA--SLDEPVTVWMKLDTG--MHRLGVRPEQAEAFYHRLTQCKNVRQP  173 (379)
T ss_dssp             TCCSCGGGHHHH-HHTTEEEEECSHHHHHHHHHC--CCSSCBCEEEEBCSS--CCSSSBCHHHHHHHHHHHTTCSSBCSS
T ss_pred             CCCCCHHHHHHH-HHCCCCCCCCCHHHHHHHHHH--HCCCCEEEEEEECCC--CCCCCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf             468998999999-970666356979999999987--348981799998178--888897805678889999874044410


Q ss_pred             HHHEECCCCCCCC-----HHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCCC
Q ss_conf             1110115433452-----058999999988758947224777348999980898899711323899999
Q gi|254780801|r  158 EGLMCIPPAMGNP-----KPHFYLLSEIARECKLTKLSMGMTRDFELAIASGATSVRIGSGIFGERPCQ  221 (222)
Q Consensus       158 ~GLMti~p~~~d~-----~~~F~~l~~l~~~~~~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~~  221 (222)
                      .|+||==+..+++     ..++..+.++.+... ...++--|+-.-.--+..-+|||+|.+++|..|+.
T Consensus       174 ~Gi~THfa~ad~~d~~~~~~Q~~~F~~~~~~~~-~~~h~anS~a~l~~~~~~~d~vR~Gi~lYG~~p~~  241 (379)
T 2rjg_A          174 VNIVSHFARADEPKCGATEKQLAIFNTFCEGKP-GQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLE  241 (379)
T ss_dssp             CEEECCCSSTTCTTSTHHHHHHHHHHHHHTTCC-SCEECCCHHHHHHCGGGCSSEECCCGGGGTCCSSS
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC-CCHHCCCCHHHHCCCCCCCCCCCCCCCEECCCCCC
T ss_conf             358825577654451999999999999975223-20100178777578723476546786156366543


No 18 
>2p3e_A Diaminopimelate decarboxylase; southeast collaboratory for structural genomics, riken spring-8 center, riken genomic sciences center; 1.99A {Aquifex aeolicus VF5}
Probab=97.90  E-value=0.0002  Score=49.67  Aligned_cols=168  Identities=13%  Similarity=0.046  Sum_probs=108.4

Q ss_pred             HHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHH-HHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCH
Q ss_conf             9999999999998198964418998718999999999-997298100012100011110000012587302302443200
Q gi|254780801|r    8 QVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRV-ALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNK   86 (222)
Q Consensus         8 ~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~-~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNK   86 (222)
                      +.|+++++.-....    +.+++.-..|.-|...|.. +.++|. .|-=.-..|+..- ....- ..-+-.|.|+.-+..
T Consensus        42 ~~i~~~~~~l~~~~----p~~~i~YAvKaN~~~~vl~~l~~~G~-g~dvaS~~El~~a-l~~G~-~~~~Ii~~g~~k~~~  114 (420)
T 2p3e_A           42 NFIKERFEAYRKAF----PDALICYAVKANFNPHLVKLLGELGA-GADIVSGGELYLA-KKAGI-PPERIVYAGVGKTEK  114 (420)
T ss_dssp             HHHHHHHHHHHHHS----TTSEEEEEGGGCCCHHHHHHHHHTTC-EEEESSHHHHHHH-HHTTC-CGGGEEECSSCCCHH
T ss_pred             HHHHHHHHHHHHHC----CCCEEEEEECCCCCHHHHHHHHHHCC-CEEEECHHHHHHH-HHCCC-CHHHEEECCCCCCCH
T ss_conf             99999999999868----99889999776899999999998099-8289728999999-98179-856778724344204


Q ss_pred             -HHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC------------CCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf             -1320111000012222200134433333311430368897004------------665634657000122234431043
Q gi|254780801|r   87 -VSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTG------------YEIQKSGIMPNQTKDFVILCRQKY  153 (222)
Q Consensus        87 -vk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~------------~e~~K~G~~p~el~~l~~~i~~~~  153 (222)
                       ++.++..-=.+-++|+...+++|...+.+.++..+|.|-||.+            +..+|+|+.++++..++..+.+++
T Consensus       115 ~l~~a~~~gv~~~~~ds~~El~~i~~~~~~~~~~~~v~lRin~~~~~~~~~~~~~~~~~skfg~~~~~~~~~~~~~~~~~  194 (420)
T 2p3e_A          115 ELTDAVDSEILMFNVESRQELDVLNEIAGKLGKKARIAIRVNPDVDPKTHPYIATGMQKSKFGVDIREAQKEYEYASKLE  194 (420)
T ss_dssp             HHHHHHHTTCSEEEECCHHHHHHHHHHHHHHTCCEEEEEEEEC----------------CCSCEEGGGHHHHHHHHHTCT
T ss_pred             HHHHHHHCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf             58989873933731489899999998887339994799998158786667553577765556644034478899998845


Q ss_pred             CCCHHHHEE-CCCCCCCCHH---HHHHHHHHHH
Q ss_conf             110011101-1543345205---8999999988
Q gi|254780801|r  154 QLNVEGLMC-IPPAMGNPKP---HFYLLSEIAR  182 (222)
Q Consensus       154 ~L~i~GLMt-i~p~~~d~~~---~F~~l~~l~~  182 (222)
                      +|++.||-. ++....|+..   ....+.++.+
T Consensus       195 ~l~~~Glh~H~gS~~~~~~~~~~ai~~~~~l~~  227 (420)
T 2p3e_A          195 NLEIVGIHCHIGSQILDISPYREAVEKVVSLYE  227 (420)
T ss_dssp             TEEEEEEECCCCSSBSSCTHHHHHHHHHHHHHH
T ss_pred             CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             960889874476678884887767889999999


No 19 
>3n2o_A ADC, biosynthetic arginine decarboxylase; lyase; HET: PLP; 2.30A {Vibrio vulnificus}
Probab=97.85  E-value=0.00028  Score=48.62  Aligned_cols=177  Identities=11%  Similarity=0.082  Sum_probs=113.1

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCH-HHHHHHHHCCCC----CCCCCC--CHHHHHHHHCCCCCCCCC
Q ss_conf             8999999999999999981989644189987189999-999999972981----000121--000111100000125873
Q gi|254780801|r    3 LGNKLQVFKQKIENSAILAKRPKDSVSLVAVSKMVDS-KKIRVALSCGQV----IFAENK--LQEAKKKWIPLRKEWDVQ   75 (222)
Q Consensus         3 i~~nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~-e~I~~~~~~G~~----~fGENr--vQE~~~K~~~l~~~~~i~   75 (222)
                      |.++++.+++....|.++.+-. ..-+.+=.+|.-|. .-++++.++|..    .||=-=  .-|+..- ..... ..-+
T Consensus        74 L~~ri~~l~~aF~~Ai~~~~Y~-g~y~~~YavKaN~~~~Vle~l~~~G~~~e~~~~GlDv~S~~EL~~a-L~~g~-~~~~  150 (648)
T 3n2o_A           74 LHQRVHSICDAFNQAIEEYQYP-NKYLLVYPIKVNQQREVVDEILASQAQLETKQLGLEAGSKPELLAV-LAMAQ-HASS  150 (648)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCS-SCEEECEEGGGCCCHHHHHHHHHHHHHSTTCCCEEEECSHHHHHHH-HHHTS-SSCC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCC-CCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHH-HHCCC-CCCE
T ss_conf             9999999999999999973999-8637998873579999999999759974345664287489999999-96599-9761


Q ss_pred             EEEECCCCCCH-HHHHC----CCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEC-----------CCCCCCCCCCC
Q ss_conf             02302443200-13201----1100001222220013443333331143036889700-----------46656346570
Q gi|254780801|r   76 LRFIGSLQSNK-VSEIV----SLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNT-----------GYEIQKSGIMP  139 (222)
Q Consensus        76 wHfIG~LQsNK-vk~i~----~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~-----------~~e~~K~G~~p  139 (222)
                      ..|-|+--+.. ++.++    .....+-.+|++...+.|...+.+.++.+.+.+.||+           +++.+|+|+++
T Consensus       151 II~~n~~K~~e~I~~Al~~~~~~~~viiviDs~~EL~~I~~ia~~~~~~~~IglRIn~~~~~~~~~~~tgg~~SKFGl~~  230 (648)
T 3n2o_A          151 VIVCNGYKDREYIRLALIGEKLGHKVFIVLEKMSELDLVLREAKSLGVTPRLGIRIRLASQGAGKWQASGGEKSKFGLSA  230 (648)
T ss_dssp             EEEECSCCCHHHHHHHHHHHHTTCEEEEEECSTHHHHHHHHHHHHHTCCCEEEEEBCCSTTSTTTTCSSSSCCCCCCBCH
T ss_pred             EEECCCCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCH
T ss_conf             78789969999999999808876572787489999999999999709985599998568667887523378767779998


Q ss_pred             CHHHHHHHHHHCCCCC-CHHHH-EECCCCCCCCHH---HHHHHHHHHH
Q ss_conf             0012223443104311-00111-011543345205---8999999988
Q gi|254780801|r  140 NQTKDFVILCRQKYQL-NVEGL-MCIPPAMGNPKP---HFYLLSEIAR  182 (222)
Q Consensus       140 ~el~~l~~~i~~~~~L-~i~GL-Mti~p~~~d~~~---~F~~l~~l~~  182 (222)
                      +++.++++.+++.+++ .+.|| +-+|..-.|++.   ....+..+..
T Consensus       231 ~ei~~~l~~l~~~~~l~~l~gLHfHiGSQI~d~~~~~~al~e~~~l~~  278 (648)
T 3n2o_A          231 SQVLNVISRLKKENQLDTLQLVHFHLGSQMANIRDVRNGVNESARFYC  278 (648)
T ss_dssp             HHHHHHHHHHHHTTCGGGEEEEECCCCSSBCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             999999999765566550457999758752328999999999999999


No 20 
>3nzq_A ADC, biosynthetic arginine decarboxylase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.10A {Escherichia coli}
Probab=97.85  E-value=0.00052  Score=46.84  Aligned_cols=177  Identities=12%  Similarity=0.072  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHH-HHHHHCCCCCCCCCC--CHHHHHHHHCCCCCCCCCEEEE
Q ss_conf             8999999999999999981989644189987189999999-999972981000121--0001111000001258730230
Q gi|254780801|r    3 LGNKLQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKI-RVALSCGQVIFAENK--LQEAKKKWIPLRKEWDVQLRFI   79 (222)
Q Consensus         3 i~~nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I-~~~~~~G~~~fGENr--vQE~~~K~~~l~~~~~i~wHfI   79 (222)
                      |.+|++.+++-...|..+.+. +...+++=..|.-|...| +.+.++|.. ||=-=  ..|+..-.. ....++ +..|-
T Consensus        96 L~~rir~l~~aF~~Ai~~~~Y-~g~y~~~YAvKAN~~~~VL~~l~~~G~~-~GlDvaS~gEL~~AL~-~g~~p~-~II~~  171 (666)
T 3nzq_A           96 LQHRLRSINAAFKRARESYGY-NGDYFLVYPIKVNQHRRVIESLIHSGEP-LGLEAGSKAELMAVLA-HAGMTR-SVIVC  171 (666)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTC-CSCEEEEEEGGGCCCHHHHHHHHTSSSC-EEEEESSHHHHHHHHH-HHTTSC-CEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCC-CCCEEEEEEECCCCCHHHHHHHHHCCCC-CCEEEECHHHHHHHHH-CCCCCC-CEEEC
T ss_conf             999999999999999998099-9877999996458989999999985998-0189818999999997-289987-19988


Q ss_pred             CCCCCCH-HHHHCC----CCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEC-----------CCCCCCCCCCCCHHH
Q ss_conf             2443200-132011----100001222220013443333331143036889700-----------466563465700012
Q gi|254780801|r   80 GSLQSNK-VSEIVS----LFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNT-----------GYEIQKSGIMPNQTK  143 (222)
Q Consensus        80 G~LQsNK-vk~i~~----~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~-----------~~e~~K~G~~p~el~  143 (222)
                      |+--+.. ++.++.    ....+-.+|++..+..|.+.+.+.+..+.+.+.||+           +++.+|+|++++++.
T Consensus       172 n~~K~~e~I~~Al~~~~~~~~v~iviDsl~EL~~I~~~a~~l~v~~rIglRi~l~~~~~~~~~~Tgg~~SKFGi~~~ei~  251 (666)
T 3nzq_A          172 NGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVL  251 (666)
T ss_dssp             CSCCCHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHTTCCCCEEEEBCCSSSCSSTTCSSSSSCCCSCBCHHHHH
T ss_pred             CCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf             99779899999998288771013441889999999999997298861677614665677776555887677877889999


Q ss_pred             HHHHHHHCCCCC-CHHHHEE-CCCCCCCCHHH---HHHHHHHHHH
Q ss_conf             223443104311-0011101-15433452058---9999999887
Q gi|254780801|r  144 DFVILCRQKYQL-NVEGLMC-IPPAMGNPKPH---FYLLSEIARE  183 (222)
Q Consensus       144 ~l~~~i~~~~~L-~i~GLMt-i~p~~~d~~~~---F~~l~~l~~~  183 (222)
                      ++++.+++.+.+ .+.||=. +|..-.+++..   ...+..+..+
T Consensus       252 ~~i~~lk~~~~l~~L~GLHfHIGSQi~d~~~~~~al~~~~~l~~e  296 (666)
T 3nzq_A          252 QLVETLREAGRLDSLQLLHFHLGSQMANIRDIATGVRESARFYVE  296 (666)
T ss_dssp             HHHHHHHHTTCTTTEEEEECCCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             999999865877754689986687644269999999999999999


No 21 
>3n2b_A Diaminopimelate decarboxylase; LYSA, lyase, structural genom center for structural genomics of infectious diseases, CSGI; 1.80A {Vibrio cholerae}
Probab=97.77  E-value=0.00032  Score=48.26  Aligned_cols=179  Identities=13%  Similarity=0.073  Sum_probs=110.8

Q ss_pred             HHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHH-HHHCCCCCCCCCCCHHHHHHH-HCCCCCCCCCEEEECCCCCC
Q ss_conf             9999999999998198964418998718999999999-997298100012100011110-00001258730230244320
Q gi|254780801|r    8 QVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRV-ALSCGQVIFAENKLQEAKKKW-IPLRKEWDVQLRFIGSLQSN   85 (222)
Q Consensus         8 ~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~-~~~~G~~~fGENrvQE~~~K~-~~l~~~~~i~wHfIG~LQsN   85 (222)
                      +.|++++++.......-  ...+.-..|.-|...|.. +.+.|. -|-=.-..|+..-. ..++   .-+-.|-|+..+.
T Consensus        60 ~~i~~~~~~l~~a~~~~--~~~i~YAvKaN~~~~vl~~l~~~G~-G~Dv~S~~El~~al~aG~~---~~~Iv~~g~~K~~  133 (441)
T 3n2b_A           60 ATLERHWHAFDKSVGDY--PHLICYAVKANSNLGVLNTLARLGS-GFDIVSVGELERVLAAGGD---PSKVVFSGVGKTE  133 (441)
T ss_dssp             HHHHHHHHHHHHHTTTS--CEEEEEEGGGCCCHHHHHHHHHTTC-EEEESSHHHHHHHHHTTCC---GGGEEECCTTCCH
T ss_pred             HHHHHHHHHHHHHHHCC--CCEEEEEECCCCCHHHHHHHHHHCC-EEEEECHHHHHHHHHCCCC---CCCEEECCCCCCH
T ss_conf             99999999999876058--9989999613898999999998399-3898699999999973999---2104862667988


Q ss_pred             HHHHHCCCCH-HCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC------------CCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf             0132011100-0012222200134433333311430368897004------------66563465700012223443104
Q gi|254780801|r   86 KVSEIVSLFD-VIETVSREKTASLLSLEMIKQSRFLPVYIQVNTG------------YEIQKSGIMPNQTKDFVILCRQK  152 (222)
Q Consensus        86 Kvk~i~~~~~-~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~------------~e~~K~G~~p~el~~l~~~i~~~  152 (222)
                      .--...-... .+-.+||....++|...+.+.++..+|+|.||.+            +..+|+|+..+++..++..+...
T Consensus       134 ~~l~~ai~~gi~~i~ids~~El~~i~~~a~~~~~~~~v~lRinp~~~~~~~~~~~~~~~~skfGi~~~~~~~~~~~~~~~  213 (441)
T 3n2b_A          134 AEMKRALQLKIKCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSL  213 (441)
T ss_dssp             HHHHHHHHTTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEBCCCCCTTTCHHHHHHHHTSSSSBCGGGHHHHHHHHHHC
T ss_pred             HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf             99999986244543443077999999888861999769999925888666634156877676676578899999975104


Q ss_pred             CCCCHHHHEE-CCCCCCCCH---HHHHHHHHHHHHC-----CCCEECCC
Q ss_conf             3110011101-154334520---5899999998875-----89472247
Q gi|254780801|r  153 YQLNVEGLMC-IPPAMGNPK---PHFYLLSEIAREC-----KLTKLSMG  192 (222)
Q Consensus       153 ~~L~i~GLMt-i~p~~~d~~---~~F~~l~~l~~~~-----~~~~LSmG  192 (222)
                      ++|++.||=+ ++....++.   .....+.++.+.+     .+..|.+|
T Consensus       214 ~~l~l~Glh~HiGSq~~~~~~~~~a~~~~~~~~~~l~~~g~~~~~ldiG  262 (441)
T 3n2b_A          214 PNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVG  262 (441)
T ss_dssp             TTEEEEEEECCTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECC
T ss_pred             CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf             6826999995168763453899999999999999999709970046633


No 22 
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=97.59  E-value=0.00078  Score=45.64  Aligned_cols=159  Identities=12%  Similarity=0.031  Sum_probs=105.5

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHH-HHHCCCCCCCCCCCHHHHHH-HHCCCCCCCCCEEEECCCCC
Q ss_conf             99999999999998198964418998718999999999-99729810001210001111-00000125873023024432
Q gi|254780801|r    7 LQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRV-ALSCGQVIFAENKLQEAKKK-WIPLRKEWDVQLRFIGSLQS   84 (222)
Q Consensus         7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~-~~~~G~~~fGENrvQE~~~K-~~~l~~~~~i~wHfIG~LQs   84 (222)
                      ++.|+++++.-.....+  ..+++.-..|.-|...|.. +.+.|. .|-=.-..|+..- ...++   .-+..|-|+.-+
T Consensus        40 ~~~l~~n~~~~~~a~~~--~~~~i~YAvKaN~~~~vl~~l~~~G~-g~dvaS~~El~~al~~G~~---~~~Ii~~gp~k~  113 (425)
T 2qgh_A           40 FDKIKQAFLNYKEAFKG--RKSLICYALKANSNLSILSLLAHLES-GADCVSIGEIQRALKAGIK---PYRIVFSGVGKS  113 (425)
T ss_dssp             HHHHHHHHHHHHHTTCS--SCEEEEEEGGGCCCHHHHHHHHHTTC-EEEESSHHHHHHHHHTTCC---GGGEEECCTTCC
T ss_pred             HHHHHHHHHHHHHHCCC--CCCEEEEEEECCCCHHHHHHHHHCCC-CEEEECHHHHHHHHHCCCC---HHHEEECCCCCC
T ss_conf             99999999999985799--99759999713899999999998099-3998299999999975998---678464256688


Q ss_pred             CHHH-HHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEC------------CCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf             0013-2011100001222220013443333331143036889700------------46656346570001222344310
Q gi|254780801|r   85 NKVS-EIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNT------------GYEIQKSGIMPNQTKDFVILCRQ  151 (222)
Q Consensus        85 NKvk-~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~------------~~e~~K~G~~p~el~~l~~~i~~  151 (222)
                      ...- .+...--.+.++|++..+++|...+...++..++.|.||.            +...+|+|+..+++.+++..+..
T Consensus       114 ~~~i~~a~~~gv~~~~~ds~~el~~i~~~a~~~~~~~~v~lRinp~~~~~~~~~~~~g~~~skfg~~~~~~~~~~~~~~~  193 (425)
T 2qgh_A          114 AFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKK  193 (425)
T ss_dssp             HHHHHHHHHTTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEBCCCCCCCSCGGGBCCSTTSSSSBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             89999887638200002137899999999986499747999982798866676523664446665026789999875542


Q ss_pred             CCCCCHHHHEE-CCCCCCCCH
Q ss_conf             43110011101-154334520
Q gi|254780801|r  152 KYQLNVEGLMC-IPPAMGNPK  171 (222)
Q Consensus       152 ~~~L~i~GLMt-i~p~~~d~~  171 (222)
                      .++|++.||-. ++....|+.
T Consensus       194 ~~~l~~~Glh~HvgS~~~~~~  214 (425)
T 2qgh_A          194 SAFLEPVSVHFHIGSQLLDLE  214 (425)
T ss_dssp             CSSEEEEEEECCCBSSBCCHH
T ss_pred             CCCEEEEEEEEECCCCCCCCH
T ss_conf             043578789970686666606


No 23 
>3nzp_A Arginine decarboxylase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: PLP; 3.00A {Campylobacter jejuni subsp}
Probab=97.59  E-value=0.0015  Score=43.73  Aligned_cols=178  Identities=9%  Similarity=0.011  Sum_probs=110.7

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHH-HHHHHCCCCC-CCCCC--CHHHHHHHHCCCCCCCCCEEE
Q ss_conf             8999999999999999981989644189987189999999-9999729810-00121--000111100000125873023
Q gi|254780801|r    3 LGNKLQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKI-RVALSCGQVI-FAENK--LQEAKKKWIPLRKEWDVQLRF   78 (222)
Q Consensus         3 i~~nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I-~~~~~~G~~~-fGENr--vQE~~~K~~~l~~~~~i~wHf   78 (222)
                      |.+|++.+++-..+|..+.+-. ...+++=..|.-|...| +.+.++|... +|=-=  ..|+..-.. + ..++-+..|
T Consensus        55 l~~ri~~l~~aF~~A~~~~~y~-g~y~~~YAvKaN~~~~Vl~~l~~~G~~~~~GlEv~S~~EL~~Al~-~-g~~~~~Ii~  131 (619)
T 3nzp_A           55 IQKQIENIYGNFNKARKEFGYK-GGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMA-Y-NNEGAPITV  131 (619)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCC-SCEEEEEEGGGCCCHHHHHHHHHHTGGGTCEEEECSHHHHHHHHH-H-SCTTSEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCC-CCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHH-C-CCCCCEEEE
T ss_conf             9999999999999999980878-881899886248999999999983742588189979999999996-7-989897998


Q ss_pred             ECCCCCCHHHHHC--C--CCHHCCCCCCCCHHHHHHHHHHH-HCCCEEEEEEEEC-----------CCCCCCCCCCCCHH
Q ss_conf             0244320013201--1--10000122222001344333333-1143036889700-----------46656346570001
Q gi|254780801|r   79 IGSLQSNKVSEIV--S--LFDVIETVSREKTASLLSLEMIK-QSRFLPVYIQVNT-----------GYEIQKSGIMPNQT  142 (222)
Q Consensus        79 IG~LQsNKvk~i~--~--~~~~Ihsvds~~~a~~L~~~~~~-~~~~~~vliQVN~-----------~~e~~K~G~~p~el  142 (222)
                      -|.--+.-+....  .  ....+=.+||+...+.|...+.+ .+..+.+.+-||.           +++.+|+|++++++
T Consensus       132 nG~kk~e~~~~a~l~~~l~~~v~ivvDs~~EL~~I~~~a~~~~~~~~~IglRi~~~~~~~~~~~~tgg~~SKFGl~~~ei  211 (619)
T 3nzp_A          132 NGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTEL  211 (619)
T ss_dssp             CSCCCHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTSCSCCCEEEEEBCCTTC-------------CCSBCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf             99788599999999861188848887999999999999998549987652132367556674224688756578637889


Q ss_pred             HHHHHHHHCCCCC-CHHHHEE-CCCCCCCCHH---HHHHHHHHHHH
Q ss_conf             2223443104311-0011101-1543345205---89999999887
Q gi|254780801|r  143 KDFVILCRQKYQL-NVEGLMC-IPPAMGNPKP---HFYLLSEIARE  183 (222)
Q Consensus       143 ~~l~~~i~~~~~L-~i~GLMt-i~p~~~d~~~---~F~~l~~l~~~  183 (222)
                      .++++.+++...+ ++.||-. +|..-.|++.   ....+.++..+
T Consensus       212 ~~~i~~l~~~~~l~~l~GlHfHiGSQi~d~~~~~~al~~~~~l~~e  257 (619)
T 3nzp_A          212 IEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTE  257 (619)
T ss_dssp             HHHHHHHHHTTCTTTEEEEECCCCSCBCCSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             9999999865776706899982587756489999999999999999


No 24 
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP; 1.65A {Bacillus circulans}
Probab=97.19  E-value=0.0043  Score=40.65  Aligned_cols=158  Identities=9%  Similarity=-0.038  Sum_probs=103.3

Q ss_pred             HHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHH-HHHCCCCCCCCCCCHHHHHH-HHCCCCCCCCCEEEECCCCCC
Q ss_conf             9999999999998198964418998718999999999-99729810001210001111-000001258730230244320
Q gi|254780801|r    8 QVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRV-ALSCGQVIFAENKLQEAKKK-WIPLRKEWDVQLRFIGSLQSN   85 (222)
Q Consensus         8 ~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~-~~~~G~~~fGENrvQE~~~K-~~~l~~~~~i~wHfIG~LQsN   85 (222)
                      +.|+++++......+   ..+++.-..|..|...|.. +.+.|. .|==.-..|+.-- ...++   .-+-.|-|+.-+.
T Consensus        25 ~~i~~n~~~l~~~~~---~~~~i~yA~KaN~~~~vl~~l~~~G~-g~dvaS~~El~~al~~G~~---~~~ii~~gp~k~~   97 (428)
T 2j66_A           25 DFIEAHYRQLRSRTN---PAIQFYLSLKANNNIHLAKLFRQWGL-GVEVASAGELALARHAGFS---AENIIFSGPGKKR   97 (428)
T ss_dssp             HHHHHHHHHHHHTSC---TTEEEEEEGGGCCCHHHHHHHHHTTC-EEEESSHHHHHHHHHTTCC---GGGEEECCSCCCH
T ss_pred             HHHHHHHHHHHHHCC---CCCEEEEEECCCCCHHHHHHHHHCCC-CEEEECHHHHHHHHHCCCC---HHHEEECCCCCCH
T ss_conf             999999999985268---99789999742799999999998199-2997399999999974999---2018976888989


Q ss_pred             HH-HHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC-----------CCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf             01-320111000012222200134433333311430368897004-----------665634657000122234431043
Q gi|254780801|r   86 KV-SEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTG-----------YEIQKSGIMPNQTKDFVILCRQKY  153 (222)
Q Consensus        86 Kv-k~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~-----------~e~~K~G~~p~el~~l~~~i~~~~  153 (222)
                      .. +.++..--.+..+|+......|+..+.+.+....+.+.+|.+           ..++|+|+.++++.+.+.......
T Consensus        98 ~~l~~a~~~gv~~~~~d~~~el~~i~~~~~~~~~~~~v~~r~~~~~~~~~~~~~~g~~~skfg~~~~~~~~~~~~~~~~~  177 (428)
T 2j66_A           98 SELEIAVQSGIYCIIAESVEELFYIEELAEKENKTARVAIRINPDKSFGSTAIKMGGVPRQFGMDESMLDAVMDAVRSLQ  177 (428)
T ss_dssp             HHHHHHHHHTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEEECSSCC--CCCSSSCCCCSSSEEGGGHHHHHHHHHHCT
T ss_pred             HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCHHCCCCHHHHHHHHHHHHHCC
T ss_conf             99987773595110367899999999988863996168851277654311221047771002654898988998764203


Q ss_pred             CCCHHHHEE-CCCCCCCCHH
Q ss_conf             110011101-1543345205
Q gi|254780801|r  154 QLNVEGLMC-IPPAMGNPKP  172 (222)
Q Consensus       154 ~L~i~GLMt-i~p~~~d~~~  172 (222)
                      ++++.|+-+ ++....++..
T Consensus       178 ~l~~~G~H~h~gS~~~~~~~  197 (428)
T 2j66_A          178 FTKFIGIHVYTGTQNLNTDS  197 (428)
T ss_dssp             TEEEEEEECCCCSCBCCHHH
T ss_pred             CCCEEEEEECCCCCCCCCHH
T ss_conf             44258888847877441035


No 25 
>2plj_A Lysine/ornithine decarboxylase; type IV decarboxylase, beta/alpha barrel, beta barrel, lyase; HET: P3T; 1.70A {Vibrio vulnificus CMCP6} PDB: 2plk_A*
Probab=97.14  E-value=0.0027  Score=42.04  Aligned_cols=176  Identities=12%  Similarity=0.097  Sum_probs=107.3

Q ss_pred             HHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHH-HHHCCCCCCCCCCCHHHHHHH-HCCCCCCCCCEEEECCCCCC
Q ss_conf             9999999999998198964418998718999999999-997298100012100011110-00001258730230244320
Q gi|254780801|r    8 QVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRV-ALSCGQVIFAENKLQEAKKKW-IPLRKEWDVQLRFIGSLQSN   85 (222)
Q Consensus         8 ~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~-~~~~G~~~fGENrvQE~~~K~-~~l~~~~~i~wHfIG~LQsN   85 (222)
                      +.+++++++.....    ..+++.-..|..|...|.. +.+.|. .|.=.-..|+..-. ..++   .-+..|-|+.-+.
T Consensus        63 ~~l~~n~~~l~~af----~~~~i~YAvKAN~~~~il~~l~~~G~-g~dv~S~~El~~al~aG~~---~~~Ii~~gp~Ks~  134 (419)
T 2plj_A           63 DVIRQQYRALKNAL----PNVTLHYALKPLPHPVVVRTLLAEGA-SFDLATTGEVELVASEGVP---ADLTIHTHPIKRD  134 (419)
T ss_dssp             HHHHHHHHHHHHHS----TTEEEEEESTTCCCHHHHHHHHHHTC-EEEECSHHHHHHHHHTTCC---GGGEEECCSSCCH
T ss_pred             HHHHHHHHHHHHHC----CCCEEEEEEECCCCHHHHHHHHHCCC-CEEEECHHHHHHHHHCCCC---CCEEEECCCCCCH
T ss_conf             99999999999868----99889999732886999999998399-5899799999999975969---1328989998874


Q ss_pred             -HHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEC--CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEE
Q ss_conf             -0132011100001222220013443333331143036889700--4665634657000122234431043110011101
Q gi|254780801|r   86 -KVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNT--GYEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMC  162 (222)
Q Consensus        86 -Kvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~--~~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMt  162 (222)
                       -++.++..--.+-++||+..+++|+..+.+.+..+.+.+.++.  +...+|+|+.+++..+++...+. .++++.||-+
T Consensus       135 eel~~Al~~gv~~~~vDs~~el~~l~~~a~~~~~~iri~~~~~~~~~~~~~kfG~~~~~~~~~~~~~~~-~~l~l~GiH~  213 (419)
T 2plj_A          135 ADIRDALAYGCNVFVVDNLNELEKFKAYRDDVELLVRLSFRNSEAFADLSKKFGCSPEQALVIIETAKE-WNIRIKGLSF  213 (419)
T ss_dssp             HHHHHHHHHTCCEEEECSHHHHHTTGGGTTTCEEEEEBCC---------CCCSCBCHHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred             HHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCCEEEEEE
T ss_conf             769999974984674032879999987520134201231146533333578777689999999999985-7995778888


Q ss_pred             -CCCCCCCCHH---HHHHHHHHH----HHC--CCCEECCC
Q ss_conf             -1543345205---899999998----875--89472247
Q gi|254780801|r  163 -IPPAMGNPKP---HFYLLSEIA----REC--KLTKLSMG  192 (222)
Q Consensus       163 -i~p~~~d~~~---~F~~l~~l~----~~~--~~~~LSmG  192 (222)
                       ++....++..   .+..+.++.    +..  .+..|.+|
T Consensus       214 H~gS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~idiG  253 (419)
T 2plj_A          214 HVGSQTTNPNKYVEAIHTCRHVMEQVVERGLPALSTLDIG  253 (419)
T ss_dssp             CCCTTCCCTHHHHHHHHHHHHHHHHHHHTTCCCCCEEECC
T ss_pred             ECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
T ss_conf             6467767841257799999987642001024564257317


No 26 
>3btn_A Antizyme inhibitor 1; TIM-like A/B barrel domain and A sheet domain, structural genomics, israel structural proteomics center, ISPC; 2.05A {Mus musculus}
Probab=96.54  E-value=0.0079  Score=38.88  Aligned_cols=175  Identities=12%  Similarity=0.078  Sum_probs=102.9

Q ss_pred             HHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHH-HHHCCCCCCCCCCCHHHHHHH-HCCCCCCCCCEEEECCCCCC
Q ss_conf             9999999999998198964418998718999999999-997298100012100011110-00001258730230244320
Q gi|254780801|r    8 QVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRV-ALSCGQVIFAENKLQEAKKKW-IPLRKEWDVQLRFIGSLQSN   85 (222)
Q Consensus         8 ~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~-~~~~G~~~fGENrvQE~~~K~-~~l~~~~~i~wHfIG~LQsN   85 (222)
                      ..|.+++++--..-    +.|++.=..|.-|...|.. +.++|.- |-=.-..|+..-. ..++   .=+.-|-|+..+.
T Consensus        46 ~~i~~~~~~~~~~~----p~v~~~YAvKaN~~~~il~~l~~~G~G-~DvaS~~El~~al~~G~~---~~~Iif~gp~Ks~  117 (448)
T 3btn_A           46 GKIVKKHSQWQTVV----AQIKPFYTVKCNSTPAVLEILAALGTG-FACSSKNEMALVQELGVS---PENIIFTSPCKQV  117 (448)
T ss_dssp             HHHHHHHHHHHHHC----TTEEEEEEGGGCCCHHHHHHHHHHTCE-EEESSHHHHHHHHHTTCC---GGGEEECCSSCCH
T ss_pred             HHHHHHHHHHHHHC----CCCEEEEEECCCCCHHHHHHHHHCCCC-EEEECHHHHHHHHHCCCC---CCCEEECCCCCCH
T ss_conf             99999999999878----998688773348989999999981993-999799999999986969---0029990898999


Q ss_pred             -HHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC------CCCCCCCCCCCHHHHHHHHHHCCCCCCHH
Q ss_conf             -01320111000012222200134433333311430368897004------66563465700012223443104311001
Q gi|254780801|r   86 -KVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTG------YEIQKSGIMPNQTKDFVILCRQKYQLNVE  158 (222)
Q Consensus        86 -Kvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~------~e~~K~G~~p~el~~l~~~i~~~~~L~i~  158 (222)
                       -++.+++.=-.+-++||+...++|.+.+    ...++++.||+.      ...+|+|+.++++.++++.++++ ++++.
T Consensus       118 ~~l~~A~~~Gv~~~~~Ds~~eL~~i~~~~----~~~~v~~rI~~~~~~~~~~~~sKFGi~~~~~~~~~~~~k~~-~l~l~  192 (448)
T 3btn_A          118 SQIKYAAKVGVNIMTCDNEIELKKIARNH----PNAKVLLHIATEDNIGGEDGNMKFGTTLKNCRHLLECAKEL-DVQII  192 (448)
T ss_dssp             HHHHHHHHHTCCEEEECSHHHHHHHHHHC----TTCEEEEEBCCCC--------CCCCBCHHHHHHHHHHHHHH-TCEEE
T ss_pred             HHHHHHHHCCCCEEEECCHHHHHHHHHHH----CCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEE
T ss_conf             99999998699759989999999999862----35880121124443332224666687778999887776228-81785


Q ss_pred             HHEE-CCCCCCCCHH---HHHHHHHH---HHHC--CCCEECC--CCCH
Q ss_conf             1101-1543345205---89999999---8875--8947224--7773
Q gi|254780801|r  159 GLMC-IPPAMGNPKP---HFYLLSEI---AREC--KLTKLSM--GMTR  195 (222)
Q Consensus       159 GLMt-i~p~~~d~~~---~F~~l~~l---~~~~--~~~~LSm--GMS~  195 (222)
                      ||-+ ++....++..   ....++.+   .+++  .+..|.+  |+..
T Consensus       193 Glh~H~GS~~~d~~~~~~~i~~~~~~~~~~~~~g~~~~~idiGGGf~~  240 (448)
T 3btn_A          193 GVKFHVSSACKEYQVYVHALSDARCVFDMAGEFGFTMNMLDIGGGFTG  240 (448)
T ss_dssp             EEECCCCTTCCCTTHHHHHHHHHHHHHHHHHHTTCCCCEEECCSCCCS
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf             645541365465487999999999999999982995367621576665


No 27 
>1f3t_A ODC, ornithine decarboxylase; beta-alpha-barrel, modified greek KEY beta-sheet, lyase; HET: PLP; 2.00A {Trypanosoma brucei} SCOP: b.49.2.3 c.1.6.1 PDB: 1qu4_A* 1szr_C* 2tod_A* 1njj_A*
Probab=96.53  E-value=0.016  Score=36.74  Aligned_cols=152  Identities=11%  Similarity=0.027  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHH-HHHHCCCCCCCCCCCHHHHHHH-HCCCCCCCCCEEEECCCCC
Q ss_conf             9999999999999819896441899871899999999-9997298100012100011110-0000125873023024432
Q gi|254780801|r    7 LQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIR-VALSCGQVIFAENKLQEAKKKW-IPLRKEWDVQLRFIGSLQS   84 (222)
Q Consensus         7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~-~~~~~G~~~fGENrvQE~~~K~-~~l~~~~~i~wHfIG~LQs   84 (222)
                      ++.|+++++.-....    +.+++.-..|.-|...|. .+.+.|. .|-=.-..|+..-. ..++   .-+..|-|+.-+
T Consensus        45 ~~~i~~~~~~~~~a~----p~~~~~YAvKAN~~~~il~~l~~~G~-g~dv~S~gEl~~al~~G~~---~~~Iv~~gp~Ks  116 (425)
T 1f3t_A           45 LGDIVRKHETWKKCL----PRVTPFYAVKCNDDWRVLGTLAALGT-GFDCASNTEIQRVRGIGVP---PEKIIYANPCKQ  116 (425)
T ss_dssp             HHHHHHHHHHHHHHC----TTEEEEEEGGGCCCHHHHHHHHHTTC-EEEECSHHHHHHHHHTTCC---GGGEEECCSSCC
T ss_pred             HHHHHHHHHHHHHHC----CCCEEEEEECCCCCHHHHHHHHHCCC-EEEEECHHHHHHHHHCCCC---CCEEEECCCCCC
T ss_conf             999999999999868----99879998634898999999998299-3998499999999976979---674999689899


Q ss_pred             CH-HHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC------CCCCCCCCCCCHHHHHHHHHHCCCCCCH
Q ss_conf             00-1320111000012222200134433333311430368897004------6656346570001222344310431100
Q gi|254780801|r   85 NK-VSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTG------YEIQKSGIMPNQTKDFVILCRQKYQLNV  157 (222)
Q Consensus        85 NK-vk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~------~e~~K~G~~p~el~~l~~~i~~~~~L~i  157 (222)
                      .+ ++.+++.--.+.++|++...++|++...    ..++.+.++..      +..+|+|+.++++.++++.+.. .++++
T Consensus       117 ~~el~~a~~~gi~~~~~ds~~el~~i~~~~~----~~~v~~ri~~~~~~~~~~~~skFG~~~~~~~~~l~~~~~-~~l~l  191 (425)
T 1f3t_A          117 ISHIRYARDSGVDVMTFDCVDELEKVAKTHP----KAKMVLRISTDDSLARCRLSVKFGAKVEDCRFILEQAKK-LNIDV  191 (425)
T ss_dssp             HHHHHHHHHTTCCEEEECSHHHHHHHHHHCT----TCEEEEEBCC----------CCSCBCHHHHHHHHHHHHH-TTCEE
T ss_pred             HHHHHHHHHCCCEECCHHHHHHHHHHHHHCC----CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEE
T ss_conf             9999999983974712788999999986445----676267850455433355777776657888999988763-26469


Q ss_pred             HHHEE-CCCCCCCCH
Q ss_conf             11101-154334520
Q gi|254780801|r  158 EGLMC-IPPAMGNPK  171 (222)
Q Consensus       158 ~GLMt-i~p~~~d~~  171 (222)
                      .||.. ++....|+.
T Consensus       192 ~GlH~H~gS~~~d~~  206 (425)
T 1f3t_A          192 TGVSFHVGSGSTDAS  206 (425)
T ss_dssp             EEEECCCCSCCSCTH
T ss_pred             EEEEEECCCCCCCHH
T ss_conf             999988788877458


No 28 
>1twi_A Diaminopimelate decarboxylase; antibiotic resistance, lysine biosynthesis, structural genomics, NYSGXRC, PSI; HET: LYS PLP; 2.00A {Methanocaldococcus jannaschii} SCOP: b.49.2.3 c.1.6.1 PDB: 1tuf_A*
Probab=96.42  E-value=0.066  Score=32.66  Aligned_cols=162  Identities=10%  Similarity=0.021  Sum_probs=103.4

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHH-HHHCCCCCCCCCCCHHHHHH-HHCCCCCCCCCEEEEC
Q ss_conf             899999999999999998198964418998718999999999-99729810001210001111-0000012587302302
Q gi|254780801|r    3 LGNKLQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRV-ALSCGQVIFAENKLQEAKKK-WIPLRKEWDVQLRFIG   80 (222)
Q Consensus         3 i~~nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~-~~~~G~~~fGENrvQE~~~K-~~~l~~~~~i~wHfIG   80 (222)
                      |.+|+..+++-+..+....|.   .+++.=..|.-|...|.. +.+.|. -|==.-..|+..- ...++   +-+..|-|
T Consensus        40 l~~n~~~l~~af~~~~~~~g~---~~~i~YAvKaN~~~~vl~~l~~~G~-G~dvaS~~El~~al~~G~~---~~~Ii~~g  112 (434)
T 1twi_A           40 IKINYNRYIEAFKRWEEETGK---EFIVAYAYKANANLAITRLLAKLGC-GADVVSGGELYIAKLSNVP---SKKIVFNG  112 (434)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSC---CEEEEEEGGGCCCHHHHHHHHHTTC-EEEECSHHHHHHHHHTTCC---GGGEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHCCC---CEEEEEEECCCCCHHHHHHHHHHCC-CEEEECHHHHHHHHHCCCC---CCEEEECC
T ss_conf             999999999988776762388---7599998624899999999998499-8399789999999963899---87189848


Q ss_pred             CCCCCH-HHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCC------------CCCCCCCCCCHHH--HH
Q ss_conf             443200-13201110000122222001344333333114303688970046------------6563465700012--22
Q gi|254780801|r   81 SLQSNK-VSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGY------------EIQKSGIMPNQTK--DF  145 (222)
Q Consensus        81 ~LQsNK-vk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~------------e~~K~G~~p~el~--~l  145 (222)
                      +.-+.+ ++.++..--.+-.+|+....+++.+.+.+.++..++.|-||..-            ..+|+|+.+++..  ..
T Consensus       113 p~k~~~~l~~a~~~gv~~~~~ds~~el~~i~~~~~~~~~~~~v~lRin~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~  192 (434)
T 1twi_A          113 NCKTKEEIIMGIEANIRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKA  192 (434)
T ss_dssp             SSCCHHHHHHHHHTTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEEECCCCTTTCHHHHHHHHHSSCSEESTTSHHHHH
T ss_pred             CCCCHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf             98999999989868970673113567889999999829986289996057687767440257665556643000468999


Q ss_pred             HHHHHCCCCCCHHHHEE-CCCCCCCCH
Q ss_conf             34431043110011101-154334520
Q gi|254780801|r  146 VILCRQKYQLNVEGLMC-IPPAMGNPK  171 (222)
Q Consensus       146 ~~~i~~~~~L~i~GLMt-i~p~~~d~~  171 (222)
                      +....+.+++++.|+.. ++....++.
T Consensus       193 ~~~~~~~~~l~~~Glh~H~gs~~~~~~  219 (434)
T 1twi_A          193 IKMALEMEYVNVVGVHCHIGSQLTDIS  219 (434)
T ss_dssp             HHHHHHCSSEEEEEEECCCCSSBCCSH
T ss_pred             HHHHHHCCCCCEEEEEEEECCCCCCCC
T ss_conf             999986489972578898356534431


No 29 
>7odc_A Protein (ornithine decarboxylase); pyridoxal-5'-phosphate, PLP, group IV decarboxylase, polyamines, parasitical, chemotherapy target, putrescine; HET: PLP; 1.60A {Mus musculus} SCOP: b.49.2.3 c.1.6.1 PDB: 2on3_A 1d7k_A*
Probab=96.12  E-value=0.069  Score=32.56  Aligned_cols=153  Identities=12%  Similarity=0.058  Sum_probs=94.6

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHH-HHHHCCCCCCCCCCCHHHHHHH-HCCCCCCCCCEEEECCCCC
Q ss_conf             9999999999999819896441899871899999999-9997298100012100011110-0000125873023024432
Q gi|254780801|r    7 LQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIR-VALSCGQVIFAENKLQEAKKKW-IPLRKEWDVQLRFIGSLQS   84 (222)
Q Consensus         7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~-~~~~~G~~~fGENrvQE~~~K~-~~l~~~~~i~wHfIG~LQs   84 (222)
                      ++.|.+++.+-.+.-    +.|++.=..|.-|...|. .+.++|. .|==.-..|+..-. ..++   .-+-.|-|+..+
T Consensus        45 ~~~i~~~~~~~~~~~----P~v~~~YAvKaN~~~~il~~l~~~G~-g~dvaS~~El~~al~~G~~---~~~Iv~~gp~K~  116 (424)
T 7odc_A           45 LGDILKKHLRWLKAL----PRVTPFYAVKCNDSRAIVSTLAAIGT-GFDCASKTEIQLVQGLGVP---AERVIYANPCKQ  116 (424)
T ss_dssp             HHHHHHHHHHHHHHC----TTEEEEEEGGGCCCHHHHHHHHHHTC-EEEECSHHHHHHHHHTTCC---GGGEEECCSSCC
T ss_pred             HHHHHHHHHHHHHHC----CCCEEEEEEEECCCHHHHHHHHHCCC-CEEEECHHHHHHHHHCCCC---CCEEEECCCCCC
T ss_conf             999999999999868----99879988510898999999998499-2999799999999986979---040999799999


Q ss_pred             -CHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC------CCCCCCCCCCCHHHHHHHHHHCCCCCCH
Q ss_conf             -001320111000012222200134433333311430368897004------6656346570001222344310431100
Q gi|254780801|r   85 -NKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTG------YEIQKSGIMPNQTKDFVILCRQKYQLNV  157 (222)
Q Consensus        85 -NKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~------~e~~K~G~~p~el~~l~~~i~~~~~L~i  157 (222)
                       .-++.++..=-.+-++||.....+|.+.    ....++++.++..      +..+|+|+.++++.++++.+.. .++++
T Consensus       117 ~~~i~~A~~~gv~~i~~ds~~EL~~l~~~----~~~~~v~~Ri~~~~~~~~~~~~skFG~~~~~~~~~~~~~~~-~~l~~  191 (424)
T 7odc_A          117 VSQIKYAASNGVQMMTFDSEIELMKVARA----HPKAKLVLRIATDDSKAVCRLSVKFGATLKTSRLLLERAKE-LNIDV  191 (424)
T ss_dssp             HHHHHHHHHTTCCEEEECSHHHHHHHHHH----CTTCEEEEEBCC-----------CCCBCHHHHHHHHHHHHH-TTCEE
T ss_pred             HHHHHHHHHCCCCEEEECCHHHHHHHHHH----CCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCCE
T ss_conf             99999999859957887899999999985----53577523651487545567667788578999999998764-59728


Q ss_pred             HHHEE-CCCCCCCCHH
Q ss_conf             11101-1543345205
Q gi|254780801|r  158 EGLMC-IPPAMGNPKP  172 (222)
Q Consensus       158 ~GLMt-i~p~~~d~~~  172 (222)
                      .|+-. ++....|+..
T Consensus       192 ~Glh~HvgS~~~d~~~  207 (424)
T 7odc_A          192 IGVSFHVGSGCTDPDT  207 (424)
T ss_dssp             EEEECCCCSSCCCTHH
T ss_pred             EEEEEECCCCCCCHHH
T ss_conf             8999972888774177


No 30 
>2o0t_A Diaminopimelate decarboxylase; PLP binding enzyme, lysine biosynthesis, structural genomics, TB structural genomics consortium; HET: LLP; 2.33A {Mycobacterium tuberculosis H37RV} PDB: 1hkv_A* 1hkw_A
Probab=95.86  E-value=0.042  Score=34.01  Aligned_cols=157  Identities=13%  Similarity=0.051  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHH-HHHCCCCCCCCCCCHHHHHH-HHCCCCCCCCCEEEECCCCCC
Q ss_conf             9999999999998198964418998718999999999-99729810001210001111-000001258730230244320
Q gi|254780801|r    8 QVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRV-ALSCGQVIFAENKLQEAKKK-WIPLRKEWDVQLRFIGSLQSN   85 (222)
Q Consensus         8 ~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~-~~~~G~~~fGENrvQE~~~K-~~~l~~~~~i~wHfIG~LQsN   85 (222)
                      +.|+++++......+   ..+++.-..|..|...|.. +.+.|. .|-=.-..|+..- ...++   .=+-.|=|+.-+.
T Consensus        50 ~~i~~n~~~l~~af~---~~~~i~yAvKaN~~~~vl~~l~~~G~-G~dvaS~~El~~al~~G~~---~~~Ii~~gp~k~~  122 (467)
T 2o0t_A           50 DDFRSRCRETAAAFG---SGANVHYAAKAFLCSEVARWISEEGL-CLDVCTGGELAVALHASFP---PERITLHGNNKSV  122 (467)
T ss_dssp             HHHHHHHHHHHHHTS---SGGGBEEEGGGCCCHHHHHHHHHHTC-EEEECSHHHHHHHHHTTCC---GGGEEECCTTCCH
T ss_pred             HHHHHHHHHHHHHCC---CCCEEEEEECCCCCHHHHHHHHHCCC-EEEEECHHHHHHHHHCCCC---CCEEEEECCCCCH
T ss_conf             999999999998568---99879998742887999999998199-7999899999999975989---3329991898999


Q ss_pred             -HHHHHCCCC-HHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEC------------CCCCCCCCCCCCHHHH--HHHHH
Q ss_conf             -013201110-0001222220013443333331143036889700------------4665634657000122--23443
Q gi|254780801|r   86 -KVSEIVSLF-DVIETVSREKTASLLSLEMIKQSRFLPVYIQVNT------------GYEIQKSGIMPNQTKD--FVILC  149 (222)
Q Consensus        86 -Kvk~i~~~~-~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~------------~~e~~K~G~~p~el~~--l~~~i  149 (222)
                       -++.++..- ..+ ++||....++|...+.+.++..++.+-+|.            +...+|+|+..++...  .+..+
T Consensus       123 ~~l~~a~~~gv~~i-~iDs~~El~~l~~~~~~~~~~~~v~lrl~~~~~~~~~~~~~~~~~~skfG~~~~~~~~~~~~~~~  201 (467)
T 2o0t_A          123 SELTAAVKAGVGHI-VVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRV  201 (467)
T ss_dssp             HHHHHHHHHTCSEE-EECSHHHHHHHHHHHHHHTCCEEEEEEEECSEEEEETEEEEESSCCSSSSEETTTTHHHHHHHHH
T ss_pred             HHHHHHHHHCCCEE-EECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             99998775043258-84678999999998776398741345320476655542234664556557650156789999999


Q ss_pred             HCCCCCCHHHHEE-CCCCCCCCHH
Q ss_conf             1043110011101-1543345205
Q gi|254780801|r  150 RQKYQLNVEGLMC-IPPAMGNPKP  172 (222)
Q Consensus       150 ~~~~~L~i~GLMt-i~p~~~d~~~  172 (222)
                      ...+++++.||.+ ++....|+..
T Consensus       202 ~~~~~~~l~Glh~H~gs~~~d~~~  225 (467)
T 2o0t_A          202 FATDHLRLVGLHSHIGSQIFDVDG  225 (467)
T ss_dssp             HHCSSEEEEEEECCCEEEECCSHH
T ss_pred             HHCCCCCEEEEEEECCCCCCCHHH
T ss_conf             735698577898863888787088


No 31 
>3n29_A Carboxynorspermidine decarboxylase; lyase; HET: PLP; 1.90A {Campylobacter jejuni subsp}
Probab=95.50  E-value=0.16  Score=30.13  Aligned_cols=111  Identities=13%  Similarity=0.007  Sum_probs=66.7

Q ss_pred             HHCEEEEECCCCCHHHHHHHH-HCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCC-CHHHHHCCCCHHCCCCCCC
Q ss_conf             441899871899999999999-72981000121000111100000125873023024432-0013201110000122222
Q gi|254780801|r   26 DSVSLVAVSKMVDSKKIRVAL-SCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQS-NKVSEIVSLFDVIETVSRE  103 (222)
Q Consensus        26 ~~v~LiaVtK~~~~e~I~~~~-~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQs-NKvk~i~~~~~~Ihsvds~  103 (222)
                      ..+++.-.-|.-|...|..++ +.|. .|=-.-..|++-.....    +-+-+|.|+-.+ .-++.++..-..| ++||+
T Consensus        68 ~~~~i~YAvKAN~~~~vl~~l~~~g~-g~dv~S~~El~la~~~~----~~~ii~~~p~k~~~ei~~a~~~g~~i-~~DS~  141 (418)
T 3n29_A           68 SGAKVLLALKGFAFSGAMKIVGEYLK-GCTCSGLWEAKFAKEYM----DKEIHTYSPAFKEDEIGEIASLSHHI-VFNSL  141 (418)
T ss_dssp             HCCEEEEETTTCCCGGGHHHHHHHSC-EEEESSHHHHHHHHHHT----CSEEEEEESSCCHHHHHHHHHHCSEE-EESSH
T ss_pred             CCCEEEEEECCCCCHHHHHHHHHHCC-EEEECCHHHHHHHCCCC----CCCEEEECCCCCHHHHHHHHHCCCEE-EECCH
T ss_conf             79889999643799899999997099-29952999999854569----98079949989899999999839989-97698


Q ss_pred             CHHHHHHHHHHHHCCCEEEEEEEEC------------CCCCCCCCCCCCHHHHHH
Q ss_conf             0013443333331143036889700------------466563465700012223
Q gi|254780801|r  104 KTASLLSLEMIKQSRFLPVYIQVNT------------GYEIQKSGIMPNQTKDFV  146 (222)
Q Consensus       104 ~~a~~L~~~~~~~~~~~~vliQVN~------------~~e~~K~G~~p~el~~l~  146 (222)
                      ...++|...+.    ..+|+|.||.            ++..+|+|+..+++.+..
T Consensus       142 ~El~~i~~~~~----~~~v~lRvnp~~~~~~~~~~~~~g~~skfGi~~~~~~~~~  192 (418)
T 3n29_A          142 AQFHKFQSKTQ----KNSLGLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVD  192 (418)
T ss_dssp             HHHHHHGGGCT----TSEEEEEBCCCCC----------CTTCCSSBCGGGGTTCC
T ss_pred             HHHHHHHHHCC----CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf             99999997577----9958999935877787741014677763457578887777


No 32 
>2oo0_A ODC, ornithine decarboxylase; beta-alpha barrel, sheet, lyase; HET: PLP; 1.90A {Homo sapiens}
Probab=94.99  E-value=0.24  Score=28.92  Aligned_cols=171  Identities=12%  Similarity=0.085  Sum_probs=100.8

Q ss_pred             HHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHH-HHHHCCCCCCCCCCCHHHHHHH-HCCCCCCCCCEEEECCCCC-
Q ss_conf             999999999999819896441899871899999999-9997298100012100011110-0000125873023024432-
Q gi|254780801|r    8 QVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIR-VALSCGQVIFAENKLQEAKKKW-IPLRKEWDVQLRFIGSLQS-   84 (222)
Q Consensus         8 ~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~-~~~~~G~~~fGENrvQE~~~K~-~~l~~~~~i~wHfIG~LQs-   84 (222)
                      ..|+++++.-...-    +.|++.=..|.-|...|. .+.+.|. .|-=--..|+..-. ..++   .=+..|-|+.-+ 
T Consensus        56 ~~i~~~~~~~~~~~----P~v~~~YAvKaN~~~~il~~l~~~G~-G~DvaS~~El~~al~aG~~---~~~Iif~gp~K~~  127 (471)
T 2oo0_A           56 GDILKKHLRWLKAL----PRVTPFYAVKCNDSKAIVKTLAATGT-GFDCASKTEIQLVQSLGVP---PERIIYANPCKQV  127 (471)
T ss_dssp             HHHHHHHHHHHHHC----TTEEEEEEGGGCCCHHHHHHHHHHTC-EEEECSHHHHHHHHHTTCC---GGGEEECCSSCCH
T ss_pred             HHHHHHHHHHHHHC----CCCEEEEEEEECCCHHHHHHHHHCCC-EEEEECHHHHHHHHHCCCC---CCEEEECCCCCCH
T ss_conf             99999999999868----99779877510898999999998499-4998599999999976989---4529997999999


Q ss_pred             CHHHHHCCC-CHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCC------CCCCCCCCCCHHHHHHHHHHCCCCCCH
Q ss_conf             001320111-0000122222001344333333114303688970046------656346570001222344310431100
Q gi|254780801|r   85 NKVSEIVSL-FDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGY------EIQKSGIMPNQTKDFVILCRQKYQLNV  157 (222)
Q Consensus        85 NKvk~i~~~-~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~------e~~K~G~~p~el~~l~~~i~~~~~L~i  157 (222)
                      .-++.++.. +.+| ++||+...++|.+.    ....++++-||.+.      -.+|+|+.++++..+++.+.. .+|++
T Consensus       128 ~el~~A~~~gv~~i-~~dS~~EL~~i~~~----~~~~~v~lRi~~~~~~~~~~~~~kFG~~~~~~~~~~~~~~~-~~l~~  201 (471)
T 2oo0_A          128 SQIKYAANNGVQMM-TFDSEVELMKVARA----HPKAKLVLRIATDDSKAVCRLSVKFGATLRTSRLLLERAKE-LNIDV  201 (471)
T ss_dssp             HHHHHHHHTTCCEE-EECSHHHHHHHHHH----CTTCEEEEEECCCCTTSSBCCTTTSCBCHHHHHHHHHHHHH-TTCEE
T ss_pred             HHHHHHHHCCCCEE-EECCHHHHHHHHHH----CCCCCEECCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHH-CCCEE
T ss_conf             99999998699799-96898999999986----02684203456786433011366766448999999998875-59518


Q ss_pred             HHHEE-CCCCCCCCH---HHHHHHHHHHH---HC--CCCEECCC
Q ss_conf             11101-154334520---58999999988---75--89472247
Q gi|254780801|r  158 EGLMC-IPPAMGNPK---PHFYLLSEIAR---EC--KLTKLSMG  192 (222)
Q Consensus       158 ~GLMt-i~p~~~d~~---~~F~~l~~l~~---~~--~~~~LSmG  192 (222)
                      .||-. ++....|+.   .....++.+.+   ++  .+..|.+|
T Consensus       202 ~GlH~HiGS~~~d~~~~~~~i~~~~~~~~~~~~~g~~~~~ldiG  245 (471)
T 2oo0_A          202 VGVSFHVGSGCTDPETFVQAISDARCVFDMGAEVGFSMYLLDIG  245 (471)
T ss_dssp             EEEEECCCBSCCCTHHHHHHHHHHHHHHHHHHHHTCCCCEEECC
T ss_pred             EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             99999758876772889999998778898887608653332247


No 33 
>2nva_A Arginine decarboxylase, A207R protein; PLP, TIM barrel, eukaryotic ODC- like, lyase; HET: PL2; 1.80A {Paramecium bursaria chlorella virus 1} PDB: 2nv9_A*
Probab=94.37  E-value=0.3  Score=28.28  Aligned_cols=137  Identities=12%  Similarity=0.053  Sum_probs=84.1

Q ss_pred             HHCEEEEECCCCCHHHHHH-HHHCCCCCCCCCCCHHHHHH-HHCCCCCCCCCEEEECCCCCC-HHHHHCCCCHHCCCCCC
Q ss_conf             4418998718999999999-99729810001210001111-000001258730230244320-01320111000012222
Q gi|254780801|r   26 DSVSLVAVSKMVDSKKIRV-ALSCGQVIFAENKLQEAKKK-WIPLRKEWDVQLRFIGSLQSN-KVSEIVSLFDVIETVSR  102 (222)
Q Consensus        26 ~~v~LiaVtK~~~~e~I~~-~~~~G~~~fGENrvQE~~~K-~~~l~~~~~i~wHfIG~LQsN-Kvk~i~~~~~~Ihsvds  102 (222)
                      +.|++-=..|.-|...|.. +.+.|. -|-=.-..|+..- ...++   +-+..|-|+.-+. -++.++..--.|-++|+
T Consensus        39 p~v~~~YAvKaN~~~~vl~~l~~~G~-G~dv~S~~El~~al~~G~~---~~~Ii~~g~~K~~~el~~ai~~gv~i~~~ds  114 (372)
T 2nva_A           39 PRVTPHYAVKCNNDEVLLKTMCDKNV-NFDCASSSEIKKVIQIGVS---PSRIIFAHTMKTIDDLIFAKDQGVDIATFDS  114 (372)
T ss_dssp             TTEEEEEEGGGCCCHHHHHHHHHTTC-EEEECSHHHHHHHHHHTCC---GGGEEECCSCCCHHHHHHHHHHTCCEEEECS
T ss_pred             CCCEEEEEECCCCCHHHHHHHHHCCC-EEEEECHHHHHHHHHCCCC---HHHEEECCCCCCHHHHHHHHHCCCCCCCCCH
T ss_conf             89869888511898999999998498-4999699999999985979---1249994898999999999985997002653


Q ss_pred             CCHHHHHHHHHHHHCCCEEEEEEEECC------CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEEC-CCCCCCCH
Q ss_conf             200134433333311430368897004------6656346570001222344310431100111011-54334520
Q gi|254780801|r  103 EKTASLLSLEMIKQSRFLPVYIQVNTG------YEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCI-PPAMGNPK  171 (222)
Q Consensus       103 ~~~a~~L~~~~~~~~~~~~vliQVN~~------~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMti-~p~~~d~~  171 (222)
                      ....+.+.+....    .++.+.++..      ...+|+|+.+.++.++....+ ..++++.||... +....++.
T Consensus       115 ~~~~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~a~-~~~l~~~GlH~H~gS~~~~~~  185 (372)
T 2nva_A          115 SFELDKIHTYHPN----CKMILRIRCDDPNATVQLGNKFGANEDEIRHLLEYAK-QLDIEVIGISFHVGSGSRNPE  185 (372)
T ss_dssp             HHHHHHHHHHCTT----CEEEEEBCCCCTTCSBCCTTTSSBCGGGHHHHHHHHH-HTTCCEEEEECCCCBSBCCHH
T ss_pred             HHHHHHHHHHCCC----CCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HCCCEEEEEEEECCCCCCCHH
T ss_conf             9999999875513----3321011015675544568877777177799999998-569818899986687658768


No 34 
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=91.24  E-value=0.86  Score=25.17  Aligned_cols=73  Identities=18%  Similarity=0.332  Sum_probs=49.8

Q ss_pred             HHHCCCCCCHHHHEECCCCC-CC--CHHHHHHHHHHHHHCCC--CEECCCCCH-HHHHHHHHCCCEEEECHHHCCCCCC
Q ss_conf             43104311001110115433-45--20589999999887589--472247773-4899998089889971132389999
Q gi|254780801|r  148 LCRQKYQLNVEGLMCIPPAM-GN--PKPHFYLLSEIARECKL--TKLSMGMTR-DFELAIASGATSVRIGSGIFGERPC  220 (222)
Q Consensus       148 ~i~~~~~L~i~GLMti~p~~-~d--~~~~F~~l~~l~~~~~~--~~LSmGMS~-D~~~Ai~~Gst~vRiGs~iFG~R~~  220 (222)
                      .+..+..+....+||+.|-. ..  ....+.+.+++++...-  -+.==|.+. -....++.|++.+=+||+||+.-.+
T Consensus       132 ~l~~~~~~d~vlim~V~PG~~GQ~f~~~~l~kI~~l~~~~~~~~I~VDGGI~~~~i~~l~~aGad~iV~GSaif~~~d~  210 (228)
T 1h1y_A          132 LVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSSIFGAAEP  210 (228)
T ss_dssp             HHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCSTTTHHHHHHHTCCEEEESHHHHTSSCH
T ss_pred             HHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECHHHHCCCCH
T ss_conf             9865314565789985589888635704789999999669986499966869888999998699999977698789999


No 35 
>3mt1_A Putative carboxynorspermidine decarboxylase prote; PSI2, MCSG, structural genomics; 2.50A {Sinorhizobium meliloti}
Probab=91.01  E-value=0.96  Score=24.86  Aligned_cols=150  Identities=13%  Similarity=0.046  Sum_probs=74.7

Q ss_pred             HCEEEEECCCCCHHHHHHHHH-CCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCCCCHHCCCCCCCCH
Q ss_conf             418998718999999999997-2981000121000111100000125873023024432001320111000012222200
Q gi|254780801|r   27 SVSLVAVSKMVDSKKIRVALS-CGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVSLFDVIETVSREKT  105 (222)
Q Consensus        27 ~v~LiaVtK~~~~e~I~~~~~-~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~~~~~Ihsvds~~~  105 (222)
                      .+++.-..|.-|...|...+. .|. .|-=.-..|+..-......  +...-+-|+ -.+.+..++..-..| .+||+..
T Consensus        29 ~~~i~YAvKaN~~~~vl~~l~~~g~-g~dvaS~~El~~a~~~g~~--~~~i~~~~~-~~~~~~~~~~~g~~i-~vDs~~E  103 (365)
T 3mt1_A           29 GAKALLALKCFATWSVFDLMRDYMD-GTTSSSLFEVRLGRERFGK--ETHAYSVAY-GDNEIDEVVSHADKI-IFNSISQ  103 (365)
T ss_dssp             CCEEEEETTTCCCGGGHHHHTTTSC-EEEESSHHHHHHHHHHTCS--EEEEEESCC-CTTTHHHHHHHCSEE-EESSHHH
T ss_pred             CCEEEEEEECCCCHHHHHHHHHCCC-EEEECCHHHHHHHHHHCCC--CCCEEECCC-CCCHHHHHHHCCCEE-EEECHHH
T ss_conf             9789999831688999999998098-4996689999999965899--661772356-740999999739989-9938889


Q ss_pred             HHHHHHHHHHHCCCEEEEEEEECC------------CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEE-CCCCCCCCHH
Q ss_conf             134433333311430368897004------------665634657000122234431043110011101-1543345205
Q gi|254780801|r  106 ASLLSLEMIKQSRFLPVYIQVNTG------------YEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMC-IPPAMGNPKP  172 (222)
Q Consensus       106 a~~L~~~~~~~~~~~~vliQVN~~------------~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMt-i~p~~~d~~~  172 (222)
                      .+++.+.+.    ..++.|-||..            ...+|.|+...+..   ..+.    .++.|+.. ++....++..
T Consensus       104 l~~i~~~~~----~~~v~lRinp~~~~~~~~~~~~~~~~s~~g~~~~~~~---~~~~----~~l~g~h~H~gs~~~~~~~  172 (365)
T 3mt1_A          104 LERFADKAA----GIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKV---ERVM----DRINGFMIHNNCENKDFGL  172 (365)
T ss_dssp             HHHHGGGGT----TSEEEEEECCC----------------CCSBCCHHHH---HTTG----GGCSEEEECCC--CCSHHH
T ss_pred             HHHHHHHHC----CCCEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHH---HHHH----HHCCEEEEECCCCCCCHHH
T ss_conf             999998720----6656899724667544234216787554317699999---9987----3176479875878875789


Q ss_pred             HHHHHHHHHHH---C--CCCEECCC
Q ss_conf             89999999887---5--89472247
Q gi|254780801|r  173 HFYLLSEIARE---C--KLTKLSMG  192 (222)
Q Consensus       173 ~F~~l~~l~~~---~--~~~~LSmG  192 (222)
                      .-..++.+.+.   +  ++..|.+|
T Consensus       173 ~~~~i~~~~~~~~~~~~~~~~idiG  197 (365)
T 3mt1_A          173 FDRMLGEIEERFGALIARVDWVSLG  197 (365)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSEEECC
T ss_pred             HHHHHHHHHHHHHHHCCCCCEEECC
T ss_conf             9999999999989868984789807


No 36 
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=91.00  E-value=0.27  Score=28.54  Aligned_cols=152  Identities=12%  Similarity=0.030  Sum_probs=74.7

Q ss_pred             CCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCCCCH--HCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC
Q ss_conf             00012100011110000012587302302443200132011100--0012222200134433333311430368897004
Q gi|254780801|r   52 IFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVSLFD--VIETVSREKTASLLSLEMIKQSRFLPVYIQVNTG  129 (222)
Q Consensus        52 ~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~~~~--~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~  129 (222)
                      .||-..++++.+....+.-..|.+.|=||+.....+...  .+|  .||..-.....+..-+.+.+.+.  .+.+.++..
T Consensus        38 ~~G~~~i~~l~~~~~~~~i~~D~k~~di~~t~~~~~~~~--gad~itvH~~~g~~~l~~~~~~~~~~~~--~~~~~l~~~  113 (207)
T 3ajx_A           38 AEGLSVITAVKKAHPDKIVFADMKTMDAGELEADIAFKA--GADLVTVLGSADDSTIAGAVKAAQAHNK--GVVVDLIGI  113 (207)
T ss_dssp             HHCTHHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHT--TCSEEEEETTSCHHHHHHHHHHHHHHTC--EEEEECTTC
T ss_pred             HCCHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHH--CCCEEEEEHHHCHHHHHHHHHHHHHCCC--EEEEEECCC
T ss_conf             559999999987379946401121215976899999981--9999998554244569999999997298--379993589


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEECCCCCC--CCHHHHHHHHHHHHHCCC-CEECCCCC-HHHHHHHHHCC
Q ss_conf             665634657000122234431043110011101154334--520589999999887589-47224777-34899998089
Q gi|254780801|r  130 YEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCIPPAMG--NPKPHFYLLSEIARECKL-TKLSMGMT-RDFELAIASGA  205 (222)
Q Consensus       130 ~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMti~p~~~--d~~~~F~~l~~l~~~~~~-~~LSmGMS-~D~~~Ai~~Gs  205 (222)
                                +...+.++.+.+   +-+..+...+..+.  .....+..++.+....+. ....-|-. .+.+.|++.||
T Consensus       114 ----------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gGi~~~~~~~a~~~Ga  180 (207)
T 3ajx_A          114 ----------EDKATRAQEVRA---LGAKFVEMHAGLDEQAKPGFDLNGLLAAGEKARVPFSVAGGVKVATIPAVQKAGA  180 (207)
T ss_dssp             ----------SSHHHHHHHHHH---TTCSEEEEECCHHHHTSTTCCTHHHHHHHHHHTSCEEEESSCCGGGHHHHHHTTC
T ss_pred             ----------CCHHHHHHHHHH---HCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHCCC
T ss_conf             ----------997999999997---2397999803555454563138899999860377677897988158999998597


Q ss_pred             CEEEECHHHCCCCCC
Q ss_conf             889971132389999
Q gi|254780801|r  206 TSVRIGSGIFGERPC  220 (222)
Q Consensus       206 t~vRiGs~iFG~R~~  220 (222)
                      +.+=|||+||++.+.
T Consensus       181 D~iVvGr~I~~a~dP  195 (207)
T 3ajx_A          181 EVAVAGGAIYGAADP  195 (207)
T ss_dssp             SEEEESHHHHTSSSH
T ss_pred             CEEEECHHHCCCCCH
T ss_conf             999986466189999


No 37 
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium}
Probab=89.55  E-value=0.31  Score=28.13  Aligned_cols=151  Identities=13%  Similarity=0.042  Sum_probs=71.9

Q ss_pred             CCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCCCCHH--CCCCCCCCHHHHHHHHHHHHCCCEEEEEE-EEC
Q ss_conf             000121000111100000125873023024432001320111000--01222220013443333331143036889-700
Q gi|254780801|r   52 IFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVSLFDV--IETVSREKTASLLSLEMIKQSRFLPVYIQ-VNT  128 (222)
Q Consensus        52 ~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~~~~~--Ihsvds~~~a~~L~~~~~~~~~~~~vliQ-VN~  128 (222)
                      .||-.-++++.+......=..|.+.|=||..-...+...  .+|+  ||........+...+.+.+.+..  +.+. ++.
T Consensus        38 ~~G~~~i~~l~~~~~~~~i~~D~K~~di~~t~~~~~~~~--gad~vtvh~~~g~~~l~~~~~~~~~~~~~--~~v~~~~~  113 (211)
T 3f4w_A           38 REGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDA--GADYVTVLGVTDVLTIQSCIRAAKEAGKQ--VVVDMICV  113 (211)
T ss_dssp             HHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHT--TCSEEEEETTSCHHHHHHHHHHHHHHTCE--EEEECTTC
T ss_pred             CCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHC--CCCEEEEEHHHCHHHHHHHHHHHHHHCCE--EEEEECCC
T ss_conf             179899999998579970798884348688999999971--99999982640667899999998752443--47874089


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEECCCCC-CCCHHHHHHHHHHHHHCCCC--EECCCCC-HHHHHHHHHC
Q ss_conf             466563465700012223443104311001110115433-45205899999998875894--7224777-3489999808
Q gi|254780801|r  129 GYEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCIPPAM-GNPKPHFYLLSEIARECKLT--KLSMGMT-RDFELAIASG  204 (222)
Q Consensus       129 ~~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMti~p~~-~d~~~~F~~l~~l~~~~~~~--~LSmGMS-~D~~~Ai~~G  204 (222)
                      .           +..+....+.+ ..+.+.++++ +... ......+..+..+.+...-.  ..+-|.+ .+...|++.|
T Consensus       114 ~-----------~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~i~v~gGi~~~~~~~a~~~G  180 (211)
T 3f4w_A          114 D-----------DLPARVRLLEE-AGADMLAVHT-GTDQQAAGRKPIDDLITMLKVRRKARIAVAGGISSQTVKDYALLG  180 (211)
T ss_dssp             S-----------SHHHHHHHHHH-HTCCEEEEEC-CHHHHHTTCCSHHHHHHHHHHCSSCEEEEESSCCTTTHHHHHTTC
T ss_pred             C-----------CHHHHHHHHHH-CCHHHHHHHH-HHCCHHHCCCCHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHCC
T ss_conf             9-----------99999998763-5889999886-225312057699999999997187665228970605799999859


Q ss_pred             CCEEEECHHHCCCCC
Q ss_conf             988997113238999
Q gi|254780801|r  205 ATSVRIGSGIFGERP  219 (222)
Q Consensus       205 st~vRiGs~iFG~R~  219 (222)
                      |+.+=+||+||++.+
T Consensus       181 ad~iVvGraI~~a~d  195 (211)
T 3f4w_A          181 PDVVIVGSAITHAAD  195 (211)
T ss_dssp             CSEEEECHHHHTCSS
T ss_pred             CCEEEECHHHHCCCC
T ss_conf             899998858737999


No 38 
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=85.35  E-value=1.2  Score=24.30  Aligned_cols=69  Identities=17%  Similarity=0.244  Sum_probs=44.2

Q ss_pred             CCCCCHHHHEECCCCCCC---CHHHHHHHHHHHH---HCCCC---EECCCCCH-HHHHHHHHCCCEEEECHHHCCCCCC
Q ss_conf             431100111011543345---2058999999988---75894---72247773-4899998089889971132389999
Q gi|254780801|r  152 KYQLNVEGLMCIPPAMGN---PKPHFYLLSEIAR---ECKLT---KLSMGMTR-DFELAIASGATSVRIGSGIFGERPC  220 (222)
Q Consensus       152 ~~~L~i~GLMti~p~~~d---~~~~F~~l~~l~~---~~~~~---~LSmGMS~-D~~~Ai~~Gst~vRiGs~iFG~R~~  220 (222)
                      ++.+...=+||+.|-...   ....+.+.+++++   +.+..   +.-=|.+. .....++.|++.+=+||+||+...+
T Consensus       129 l~~vd~vlvM~V~pG~~Gq~f~~~~~~ki~~l~~~~~~~~~~~~I~vDGGin~~~i~~l~~~Gad~~V~GS~if~~~d~  207 (220)
T 2fli_A          129 LDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEAGANVFVAGSYLFKASDL  207 (220)
T ss_dssp             TTTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCCTTTHHHHHHHTCCEEEESHHHHTSSCH
T ss_pred             HHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECHHHHCCCCH
T ss_conf             7550879898875664665554057899999999997529970699846778887999998799999978588689999


No 39 
>2yxx_A Diaminopimelate decarboxylase; TM1517, TIM beta/alpha barrel fold, lyase, structural genomics, NPPSFA; HET: PLP; 1.70A {Thermotoga maritima MSB8}
Probab=83.90  E-value=2.5  Score=22.02  Aligned_cols=174  Identities=12%  Similarity=0.067  Sum_probs=89.3

Q ss_pred             HHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHH-HHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCH
Q ss_conf             9999999999998198964418998718999999999-997298100012100011110000012587302302443200
Q gi|254780801|r    8 QVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRV-ALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNK   86 (222)
Q Consensus         8 ~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~-~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNK   86 (222)
                      +.|+++++.-.....  ...+++.=..|.-|...|.. +.++|. .|==.-..|+.. +..+. ...-+.-|-|+.-+..
T Consensus        21 ~~l~~~~~~l~~~~~--~~~~~~~YAvKaN~~~~vl~~l~~~G~-g~dvaS~~El~~-al~~G-~~~~~ii~~~~~k~~~   95 (386)
T 2yxx_A           21 ETLRKRSRLVKEVFE--GVNLLPTFAVKANNNPVLLKILREEGF-GMDVVTKGELLA-AKLAG-VPSHTVVWNGNGKSRD   95 (386)
T ss_dssp             HHHHHHHHHHHHHTT--TSCEEEEEEGGGCCCHHHHHHHHHTTC-EEEECSHHHHHH-HHHTT-CCGGGEEECCSCCCHH
T ss_pred             HHHHHHHHHHHHHCC--CCCCEEEEEECCCCCHHHHHHHHHHCC-CEEEECHHHHHH-HHHHC-CCCCEEEECCCCCCHH
T ss_conf             999999999997457--789689999600785999999998399-679959999999-99818-9975488628989999


Q ss_pred             -HHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCC------------CCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf             -13201110000122222001344333333114303688970046------------65634657000122234431043
Q gi|254780801|r   87 -VSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGY------------EIQKSGIMPNQTKDFVILCRQKY  153 (222)
Q Consensus        87 -vk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~------------e~~K~G~~p~el~~l~~~i~~~~  153 (222)
                       ++.++..--.+.++|+....+.+....   ....++.+.||..-            ...|.|+..++....   +....
T Consensus        96 ~l~~a~~~gv~~~~~d~~~~~~~~~~~~---~~~~~i~lri~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~  169 (386)
T 2yxx_A           96 QMEHFLREDVRIVNVDSFEEMEIWRELN---PEGVEYFIRVNPEVDAKTHPHISTGLKKHKFGIPLEDLDSF---MERFR  169 (386)
T ss_dssp             HHHHHHHTTCCEEEECCHHHHHHHHHHC---CTTCEEEEEEECCCCTTTSHHHHHHHHHSSSSEEGGGHHHH---HHHHT
T ss_pred             HHHHHHHCCCCCCCCCCHHHHHHHHHHH---CCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCHHHHHHHH---HHHHH
T ss_conf             9999986397510243289999998750---33410565436885666776221377667665035555689---98743


Q ss_pred             CCCHHHHEE-CCCCCCCCHHH---HHHHHHHHHHCCCCEECCC
Q ss_conf             110011101-15433452058---9999999887589472247
Q gi|254780801|r  154 QLNVEGLMC-IPPAMGNPKPH---FYLLSEIARECKLTKLSMG  192 (222)
Q Consensus       154 ~L~i~GLMt-i~p~~~d~~~~---F~~l~~l~~~~~~~~LSmG  192 (222)
                      ++++.||.. ++....++...   +..+.++....++..|.+|
T Consensus       170 ~~~l~GlhfHvgS~~~~~~~~~~a~~~~~~~~~~~~~~~idiG  212 (386)
T 2yxx_A          170 SMNIRGLHVHIGSQITRVEPFVEAFSKVVRASERYGFEEINIG  212 (386)
T ss_dssp             TSCEEEEECCCCSSBCCSHHHHHHHHHHHHHHHHHTCSEEECC
T ss_pred             CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf             1780489874486544554066799999998630598566346


No 40 
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose phosphate pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=83.13  E-value=2  Score=22.73  Aligned_cols=68  Identities=21%  Similarity=0.364  Sum_probs=43.1

Q ss_pred             CCCCHHHHEECCCCCCC---CHHHHHHHHHH---HHHCCCC---EECCCCCH-HHHHHHHHCCCEEEECHHHCCCCCC
Q ss_conf             31100111011543345---20589999999---8875894---72247773-4899998089889971132389999
Q gi|254780801|r  153 YQLNVEGLMCIPPAMGN---PKPHFYLLSEI---ARECKLT---KLSMGMTR-DFELAIASGATSVRIGSGIFGERPC  220 (222)
Q Consensus       153 ~~L~i~GLMti~p~~~d---~~~~F~~l~~l---~~~~~~~---~LSmGMS~-D~~~Ai~~Gst~vRiGs~iFG~R~~  220 (222)
                      +.+...=+||+.|-..-   ....+.+.+++   .++.+..   +.==|.+. -.....+.|++.+=.||+||+.-++
T Consensus       139 ~~vD~VlvMtV~PGf~GQ~f~~~~l~kI~~~~~~~~~~~~~~~I~VDGGIn~~~i~~l~~~Gad~~V~GS~if~~~d~  216 (230)
T 1rpx_A          139 DAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAPDY  216 (230)
T ss_dssp             TTCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHHHTCCEEEESHHHHTSSCH
T ss_pred             HHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECHHHHCCCCH
T ss_conf             657989998876898754446889999999999998659935899988878899999998699999978688689999


No 41 
>1knw_A Diaminopimelate decarboxylase; pyridoxal-phosphate, decarboxylation, lysine, TIM-barrel, lyase; HET: PLP MES; 2.10A {Escherichia coli} SCOP: b.49.2.3 c.1.6.1 PDB: 1ko0_A*
Probab=83.02  E-value=2.7  Score=21.79  Aligned_cols=143  Identities=13%  Similarity=0.094  Sum_probs=84.2

Q ss_pred             CEEEEECCCCCHHHHH-HHHHCCCCCCCCCCCHHHHHHH-HCCCCC-CCCCEEEECCCCCCH-HHHHCCCCHHCCCCCCC
Q ss_conf             1899871899999999-9997298100012100011110-000012-587302302443200-13201110000122222
Q gi|254780801|r   28 VSLVAVSKMVDSKKIR-VALSCGQVIFAENKLQEAKKKW-IPLRKE-WDVQLRFIGSLQSNK-VSEIVSLFDVIETVSRE  103 (222)
Q Consensus        28 v~LiaVtK~~~~e~I~-~~~~~G~~~fGENrvQE~~~K~-~~l~~~-~~i~wHfIG~LQsNK-vk~i~~~~~~Ihsvds~  103 (222)
                      .++.=..|.-|...|. .+.++|. .|-=.-..|+..-. ..++.. ..-+-.|-|+.-+.. ++.++++-..| ++||+
T Consensus        47 ~~v~YAvKaN~~~~vl~~l~~~G~-g~dvaS~~El~~al~~G~~~~~~~~~Ii~~gp~k~~~~l~~a~~~g~~i-~~ds~  124 (425)
T 1knw_A           47 DVVRFAQKACSNIHILRLMREQGV-KVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPV-NAGSV  124 (425)
T ss_dssp             SEEEEEGGGCCCHHHHHHHHHTTC-EEEECSHHHHHHHHHTTCCTTTCTTSEEEEESCCCHHHHHHHHHHTCCE-EESSH
T ss_pred             CEEEEEEECCCCHHHHHHHHHCCC-CEEEECHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCC-CCHHH
T ss_conf             989999511789999999998499-7899899999999986999667734279747855699997665405300-10258


Q ss_pred             CHHHHHHHHHHHHCCCEEEEEEEEC------------CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEE-CCCCCCCC
Q ss_conf             0013443333331143036889700------------4665634657000122234431043110011101-15433452
Q gi|254780801|r  104 KTASLLSLEMIKQSRFLPVYIQVNT------------GYEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMC-IPPAMGNP  170 (222)
Q Consensus       104 ~~a~~L~~~~~~~~~~~~vliQVN~------------~~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMt-i~p~~~d~  170 (222)
                      ...++|++.+..    .++.+.||.            +...+|+|+.+++...+...+.. .++++.||-. +++...++
T Consensus       125 ~el~~l~~~~~~----~~v~lRi~~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~-~~l~~~Glh~H~gS~~~~~  199 (425)
T 1knw_A          125 DMLDQLGQVSPG----HRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR-HHLQLVGIHMHIGSGVDYA  199 (425)
T ss_dssp             HHHHHHHHHSTT----CEEEEEEECSCCSSCTTSCCSSSTTCCCSEEGGGHHHHHHHHHH-TTCEEEEEECCCCCTTCHH
T ss_pred             HHHHHHHHHCCC----CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEEEEEEECCCCCHH
T ss_conf             899999750454----53110037886655465555666666554031332477899875-5925877787405544357


Q ss_pred             HHHHHHHH
Q ss_conf             05899999
Q gi|254780801|r  171 KPHFYLLS  178 (222)
Q Consensus       171 ~~~F~~l~  178 (222)
                       ..+..+.
T Consensus       200 -~~~~~~~  206 (425)
T 1knw_A          200 -HLEQVCG  206 (425)
T ss_dssp             -HHHHHHH
T ss_pred             -HHHHHHH
T ss_conf             -8899987


No 42 
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, structural genomics, center for structural genomics of infectious diseases; 2.05A {Francisella tularensis subsp}
Probab=81.55  E-value=2.8  Score=21.68  Aligned_cols=67  Identities=16%  Similarity=0.286  Sum_probs=42.9

Q ss_pred             CCCCHHHHEECCCCCCC---CHHHHHHHHHHHH---HCCCC---EECCCCCH-HHHHHHHHCCCEEEECHHHCCCCC
Q ss_conf             31100111011543345---2058999999988---75894---72247773-489999808988997113238999
Q gi|254780801|r  153 YQLNVEGLMCIPPAMGN---PKPHFYLLSEIAR---ECKLT---KLSMGMTR-DFELAIASGATSVRIGSGIFGERP  219 (222)
Q Consensus       153 ~~L~i~GLMti~p~~~d---~~~~F~~l~~l~~---~~~~~---~LSmGMS~-D~~~Ai~~Gst~vRiGs~iFG~R~  219 (222)
                      +.+...=+||+.|-...   ....+.+.+++++   +.+..   +.==|.+. ......++|++.+=.||+||+.-.
T Consensus       155 ~~iD~VlvM~V~PGf~GQ~f~~~~l~kI~~l~~~~~~~~~~~~I~VDGGIn~~ti~~l~~aGad~~V~GSaiF~~~d  231 (246)
T 3inp_A          155 SNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGSAIFNSDS  231 (246)
T ss_dssp             GGCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTTCCEEEESHHHHTSSC
T ss_pred             HHHCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECHHHHCCCC
T ss_conf             40003567421698876114577999999999887524777159997987999999999879999997868868999


No 43 
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=81.32  E-value=1.4  Score=23.67  Aligned_cols=151  Identities=11%  Similarity=-0.032  Sum_probs=72.8

Q ss_pred             CCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCCCCH--HCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCC
Q ss_conf             0012100011110000012587302302443200132011100--00122222001344333333114303688970046
Q gi|254780801|r   53 FAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVSLFD--VIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGY  130 (222)
Q Consensus        53 fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~~~~--~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~  130 (222)
                      ||..-++++.+......=..|.+.|=||....+.+...  .+|  .+|........+.+.+.+.+.+.  .+.+......
T Consensus        42 ~G~~~i~~l~~~~~~~~i~~d~K~~Di~~~~~~~~~~~--gad~itvh~~~g~~~i~~~~~~~~~~~~--~~~v~~~~~~  117 (216)
T 1q6o_A           42 EGVRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEA--NADWVTVICCADINTAKGALDVAKEFNG--DVQIELTGYW  117 (216)
T ss_dssp             HCTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHT--TCSEEEEETTSCHHHHHHHHHHHHHTTC--EEEEEECSCC
T ss_pred             CCHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHHHHH--CCCEEEECCCCCHHHHHHHHHHHHHHCC--CCEEEECCCC
T ss_conf             79999999998789974631223277377999999984--9999998131787999999999875222--1123106999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHCCCCCCHHHH-EECCCCCC---CCHHHHHHHHHHHHHCCCCEECCC-CCHHHHHHHHHCC
Q ss_conf             656346570001222344310431100111-01154334---520589999999887589472247-7734899998089
Q gi|254780801|r  131 EIQKSGIMPNQTKDFVILCRQKYQLNVEGL-MCIPPAMG---NPKPHFYLLSEIARECKLTKLSMG-MTRDFELAIASGA  205 (222)
Q Consensus       131 e~~K~G~~p~el~~l~~~i~~~~~L~i~GL-Mti~p~~~---d~~~~F~~l~~l~~~~~~~~LSmG-MS~D~~~Ai~~Gs  205 (222)
                      .       ++...++...     ++....+ |+..+...   ........++.+...--.-...-| -.++...|++.||
T Consensus       118 ~-------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~gGi~~~~~~~~~~~Ga  185 (216)
T 1q6o_A          118 T-------WEQAQQWRDA-----GIGQVVYHRSRDAQAAGVAWGEADITAIKRLSDMGFKVTVTGGLALEDLPLFKGIPI  185 (216)
T ss_dssp             C-------HHHHHHHHHT-----TCCEEEEECCHHHHHTTCCCCHHHHHHHHHHHHTTCEEEEESSCCGGGGGGGTTSCC
T ss_pred             C-------HHHHHHHHHC-----CCCCEEEECCCCCCCCCEECCHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHCCC
T ss_conf             8-------9999988866-----823210210243587887378889999999846897387689988036999998599


Q ss_pred             CEEEECHHHCCCCC
Q ss_conf             88997113238999
Q gi|254780801|r  206 TSVRIGSGIFGERP  219 (222)
Q Consensus       206 t~vRiGs~iFG~R~  219 (222)
                      +.+=|||+||++.+
T Consensus       186 d~iVVGr~I~~a~d  199 (216)
T 1q6o_A          186 HVFIAGRSIRDAAS  199 (216)
T ss_dssp             SEEEESHHHHTSSC
T ss_pred             CEEEECHHHCCCCC
T ss_conf             99998825417999


No 44 
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=80.56  E-value=2.8  Score=21.73  Aligned_cols=68  Identities=16%  Similarity=0.269  Sum_probs=42.6

Q ss_pred             CCCCHHHHEECCCCC-CC--CHHHHHHHHHH---HHHCCCC---EECCCCC-HHHHHHHHHCCCEEEECHHHCCCCCC
Q ss_conf             311001110115433-45--20589999999---8875894---7224777-34899998089889971132389999
Q gi|254780801|r  153 YQLNVEGLMCIPPAM-GN--PKPHFYLLSEI---ARECKLT---KLSMGMT-RDFELAIASGATSVRIGSGIFGERPC  220 (222)
Q Consensus       153 ~~L~i~GLMti~p~~-~d--~~~~F~~l~~l---~~~~~~~---~LSmGMS-~D~~~Ai~~Gst~vRiGs~iFG~R~~  220 (222)
                      +.+...=+|++-|-. +.  ....+.+.+++   .++.+..   +.==|.+ .-.+..++.|++.+=.||+||+.-.+
T Consensus       133 ~~~d~vliM~V~PGf~GQ~f~~~~~~kI~~~~~~~~~~~~~~~I~VDGGIn~~~i~~l~~~Gad~~V~GS~if~~~d~  210 (230)
T 1tqj_A          133 PVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAIVAGSAVFNAPNY  210 (230)
T ss_dssp             GGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHHHTCCEEEESHHHHTSSCH
T ss_pred             CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECHHHHCCCCH
T ss_conf             536869999854787876556026899999999972359970699978888999999998699999978688489999


No 45 
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor}
Probab=79.82  E-value=2  Score=22.63  Aligned_cols=160  Identities=14%  Similarity=0.062  Sum_probs=72.4

Q ss_pred             CCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHH---CCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEC
Q ss_conf             000121000111100000125873023024432001320---11100001222220013443333331143036889700
Q gi|254780801|r   52 IFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEI---VSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNT  128 (222)
Q Consensus        52 ~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i---~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~  128 (222)
                      .||.+-+.++...  .+.-..|.+++=||..=...++.+   ......+|+.........+...+.+.+....+++.+..
T Consensus        65 ~~G~~~i~~lk~~--~~~i~~D~K~~Di~~t~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  142 (255)
T 3ldv_A           65 LFGPDFVRELHKR--GFSVFLDLKFHDIPNTCSKAVKAAAELGVWMVNVHASGGERMMAASREILEPYGKERPLLIGVTV  142 (255)
T ss_dssp             HHHHHHHHHHHHT--TCCEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGGGCHHHHHHHHHHHGGGGGGSCEEEEECS
T ss_pred             HHCHHHHHHHHCC--CCCEEEEHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf             3298999998632--54415201323565799999999862057489984157335678888888741775506888751


Q ss_pred             CCCCCCCCCCCCHHH---HHHHHHHCCCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCEECCCC------CHH---
Q ss_conf             466563465700012---22344310431100111011543345205899999998875894722477------734---
Q gi|254780801|r  129 GYEIQKSGIMPNQTK---DFVILCRQKYQLNVEGLMCIPPAMGNPKPHFYLLSEIARECKLTKLSMGM------TRD---  196 (222)
Q Consensus       129 ~~e~~K~G~~p~el~---~l~~~i~~~~~L~i~GLMti~p~~~d~~~~F~~l~~l~~~~~~~~LSmGM------S~D---  196 (222)
                      .  ++..........   .+...+..  .....+...+...... ......++.... ..+..++-|-      ++|   
T Consensus       143 ~--~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~tpGI~~~g~~~~dq~~  216 (255)
T 3ldv_A          143 L--TSMESADLQGIGILSAPQDHVLR--LATLTKNAGLDGVVCS-AQEASLLKQHLG-REFKLVTPGIRPAGSEQGDQRR  216 (255)
T ss_dssp             C--TTCCHHHHHHTTCCSCHHHHHHH--HHHHHHHTTCSEEECC-HHHHHHHHHHHC-TTSEEEEECCCCTTSTTSSCSS
T ss_pred             C--CCCCHHHHHHHCCCCCHHHHHHH--HHHHHHHHCCCCCCCC-HHHHHHHHHHHC-CCCCEECCCCCCCCCCCCCCCC
T ss_conf             3--44577789973444667788889--8867765066655566-788999998750-3453536664048886665543


Q ss_pred             ---HHHHHHHCCCEEEECHHHCCCCC
Q ss_conf             ---89999808988997113238999
Q gi|254780801|r  197 ---FELAIASGATSVRIGSGIFGERP  219 (222)
Q Consensus       197 ---~~~Ai~~Gst~vRiGs~iFG~R~  219 (222)
                         .+.|++.|++.+=|||+|+++.+
T Consensus       217 ~~tp~~ai~~gaDiiIVGRaI~~a~d  242 (255)
T 3ldv_A          217 IMTPAQAIASGSDYLVIGRPITQAAH  242 (255)
T ss_dssp             SCCHHHHHHTTCSEEEECHHHHTCSC
T ss_pred             CCCHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             48999999879999998962358989


No 46 
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} PDB: 3exs_A* 3ext_A
Probab=74.09  E-value=1.1  Score=24.44  Aligned_cols=159  Identities=9%  Similarity=-0.022  Sum_probs=73.5

Q ss_pred             CCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCC
Q ss_conf             00012100011110000012587302302443200132011100001222220013443333331143036889700466
Q gi|254780801|r   52 IFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYE  131 (222)
Q Consensus        52 ~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e  131 (222)
                      .||-.-+++++++...++=..|++.|=||......+...-...-.+|........+.......+.+. ..+++.+.+..+
T Consensus        43 ~~G~~~i~~l~~~~~~~~i~~DlK~~Dip~t~~~~~~~~gad~itvh~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  121 (221)
T 3exr_A           43 QVGSELVEVLRSLFPDKIIVADTKCADAGGTVAKNNAVRGADWMTCICSATIPTMKAARKAIEDINP-DKGEIQVELYGD  121 (221)
T ss_dssp             HHCTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHTTTCSEEEEETTSCHHHHHHHHHHHHHHCT-TTCEEEEECCSS
T ss_pred             HCCHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHH-CCCEEEEECCCC
T ss_conf             2599999999986899707987675148205789998716989998041138899999999997400-263789872689


Q ss_pred             CCCCCCCCCHHHHHHHHHHC--CCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCE-ECCCC-CHHHHHHHHHCCCE
Q ss_conf             56346570001222344310--4311001110115433452058999999988758947-22477-73489999808988
Q gi|254780801|r  132 IQKSGIMPNQTKDFVILCRQ--KYQLNVEGLMCIPPAMGNPKPHFYLLSEIARECKLTK-LSMGM-TRDFELAIASGATS  207 (222)
Q Consensus       132 ~~K~G~~p~el~~l~~~i~~--~~~L~i~GLMti~p~~~d~~~~F~~l~~l~~~~~~~~-LSmGM-S~D~~~Ai~~Gst~  207 (222)
                           ...+.+..+.+.-..  ..+....+-+.-.+.   ........+++... .... .--|- .++.+.|++.||+.
T Consensus       122 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~vr~~~~~-~~~I~v~GGi~~~~~~~~~~~Gad~  192 (221)
T 3exr_A          122 -----WTYDQAQQWLDAGISQAIYHQSRDALLAGETW---GEKDLNKVKKLIEM-GFRVSVTGGLSVDTLKLFEGVDVFT  192 (221)
T ss_dssp             -----CCHHHHHHHHHTTCCEEEEECCHHHHHHTCCC---CHHHHHHHHHHHHH-TCEEEEESSCCGGGGGGGTTCCCSE
T ss_pred             -----CCHHHHHHHHHCCCCEEEEEECCCCCCCCCCC---CHHHHHHHHHHHCC-CCEEEECCCCCCCCHHHHHHCCCCE
T ss_conf             -----99999999885463359876426566567767---99999999997436-9706557986847899999869899


Q ss_pred             EEECHHHCCCCCC
Q ss_conf             9971132389999
Q gi|254780801|r  208 VRIGSGIFGERPC  220 (222)
Q Consensus       208 vRiGs~iFG~R~~  220 (222)
                      +=+||+||++.++
T Consensus       193 iVVGraI~~a~dP  205 (221)
T 3exr_A          193 FIAGRGITEAKNP  205 (221)
T ss_dssp             EEECHHHHTSSSH
T ss_pred             EEECCHHCCCCCH
T ss_conf             9988143179999


No 47 
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=74.07  E-value=5  Score=20.01  Aligned_cols=69  Identities=19%  Similarity=0.329  Sum_probs=43.4

Q ss_pred             CCCCCHHHHEECCCCCC-CC--HHHHHHHHHHHH---HCCCC---EECCCCC-HHHHHHHHHCCCEEEECH-HHCCC-CC
Q ss_conf             43110011101154334-52--058999999988---75894---7224777-348999980898899711-32389-99
Q gi|254780801|r  152 KYQLNVEGLMCIPPAMG-NP--KPHFYLLSEIAR---ECKLT---KLSMGMT-RDFELAIASGATSVRIGS-GIFGE-RP  219 (222)
Q Consensus       152 ~~~L~i~GLMti~p~~~-d~--~~~F~~l~~l~~---~~~~~---~LSmGMS-~D~~~Ai~~Gst~vRiGs-~iFG~-R~  219 (222)
                      ++.+...=+|++.|-.. .+  ...+.+.+++++   +.++.   +.==|.+ ......++.|++.+=+|| +||+. .+
T Consensus       126 l~~~D~vl~M~V~pG~~Gq~f~~~~l~ki~~l~~~~~~~~~~~~I~VDGGIn~e~i~~l~~aGad~~V~Gss~iF~~~~~  205 (231)
T 3ctl_A          126 IHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGADVFIVGTSGLFNHAEN  205 (231)
T ss_dssp             GGGCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCSTTTHHHHHHHTCCEEEECTTTTGGGCSS
T ss_pred             HCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCHHHCCCCCC
T ss_conf             13328899957768878753258899999999999983499936999899889999999986989999881887589999


Q ss_pred             C
Q ss_conf             9
Q gi|254780801|r  220 C  220 (222)
Q Consensus       220 ~  220 (222)
                      +
T Consensus       206 ~  206 (231)
T 3ctl_A          206 I  206 (231)
T ss_dssp             H
T ss_pred             H
T ss_conf             9


No 48 
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum 3D7} SCOP: c.1.2.2
Probab=72.50  E-value=5.5  Score=19.76  Aligned_cols=68  Identities=21%  Similarity=0.321  Sum_probs=45.7

Q ss_pred             CCCCHHHHEECCCCCC-C--CHHHHHHHHHHHHHCC-CC-EECCCCCH-HHHHHHHHCCCEEEECHHHCCCCCC
Q ss_conf             3110011101154334-5--2058999999988758-94-72247773-4899998089889971132389999
Q gi|254780801|r  153 YQLNVEGLMCIPPAMG-N--PKPHFYLLSEIARECK-LT-KLSMGMTR-DFELAIASGATSVRIGSGIFGERPC  220 (222)
Q Consensus       153 ~~L~i~GLMti~p~~~-d--~~~~F~~l~~l~~~~~-~~-~LSmGMS~-D~~~Ai~~Gst~vRiGs~iFG~R~~  220 (222)
                      ..+...=+||+.|-.. .  ....+.+.+++++... +. +.=-|.+. ......+.|++.+=+||+||+.-++
T Consensus       137 ~~iD~vl~m~V~PGf~GQ~f~~~~l~kI~~lr~~~~~~~I~VDGGIn~e~i~~l~~~Gad~~V~GSaif~~~d~  210 (227)
T 1tqx_A          137 NLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYKNLNIQVDGGLNIETTEISASHGANIIVAGTSIFNAEDP  210 (227)
T ss_dssp             TCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTCEEEEESSCCHHHHHHHHHHTCCEEEESHHHHTCSSH
T ss_pred             CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEECHHHHCCCCH
T ss_conf             43257999984136787434612678999999837997699985688899999998399999965698789999


No 49 
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=70.64  E-value=6  Score=19.49  Aligned_cols=116  Identities=14%  Similarity=-0.000  Sum_probs=64.8

Q ss_pred             CCCHHHHHHHHH-HHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHC--CCCCCHHHHEECCCCCCCCH-HHHHH-
Q ss_conf             220013443333-33114303688970046656346570001222344310--43110011101154334520-58999-
Q gi|254780801|r  102 REKTASLLSLEM-IKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQ--KYQLNVEGLMCIPPAMGNPK-PHFYL-  176 (222)
Q Consensus       102 s~~~a~~L~~~~-~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~--~~~L~i~GLMti~p~~~d~~-~~F~~-  176 (222)
                      |.+++.++-+.. +..+....+.+.++..+...+.|..+++..+++..+.+  +.-+++-+=+.+++...... ..|.. 
T Consensus       207 R~Rf~~Eii~air~~~g~~~~i~~R~~~~~~~~~~g~~~~e~~~~~~~l~~~gvD~i~vs~G~~~~~~~~~~~~~~~~~~  286 (363)
T 3l5l_A          207 RSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPI  286 (363)
T ss_dssp             HHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHH
T ss_conf             06789999999998626677402105732357889864889999999998618767998547322676666674200579


Q ss_pred             HHHHHHHCCCCEECCCCCHHH---HHHHHHC-CCEEEECHHHCCC
Q ss_conf             999988758947224777348---9999808-9889971132389
Q gi|254780801|r  177 LSEIARECKLTKLSMGMTRDF---ELAIASG-ATSVRIGSGIFGE  217 (222)
Q Consensus       177 l~~l~~~~~~~~LSmGMS~D~---~~Ai~~G-st~vRiGs~iFG~  217 (222)
                      .+.+++....+.+.-|.=.|.   +.+|++| +.+|=+|+.+...
T Consensus       287 a~~ik~~~~~pvi~~G~i~~~~~ae~~l~~g~~D~V~~gR~~iad  331 (363)
T 3l5l_A          287 AERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLAD  331 (363)
T ss_dssp             HHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHHC
T ss_pred             HHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHC
T ss_conf             999998659308997786999999999987995234751998869


No 50 
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=67.19  E-value=6.4  Score=19.32  Aligned_cols=140  Identities=13%  Similarity=0.134  Sum_probs=69.0

Q ss_pred             CCCCEEEECCC---CCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEE--CCCCC--C-CCCCCCCHHH
Q ss_conf             58730230244---320013201110000122222001344333333114303688970--04665--6-3465700012
Q gi|254780801|r   72 WDVQLRFIGSL---QSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVN--TGYEI--Q-KSGIMPNQTK  143 (222)
Q Consensus        72 ~~i~wHfIG~L---QsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN--~~~e~--~-K~G~~p~el~  143 (222)
                      .|.++|=||+.   |-.++.+.-..+-.+|........+...+.+.+.++...+++-|-  ++.+.  . ..|. .....
T Consensus        70 ~D~K~~DI~~tv~~~~~~~~~~~~d~~tvh~~~g~~~i~~~~~~~~~~~~~~~~l~~v~~~ts~~~~~~~~~~~-~~~~~  148 (245)
T 1eix_A           70 LDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGM-TLSPA  148 (245)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHHTCSEEEEBGGGCHHHHHHHHHTTGGGGGGCCEEEEECSCTTCCHHHHHTTTC-CSCHH
T ss_pred             EEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHCC-CCCHH
T ss_conf             77100563179999999777438989999887777789999877875088773489996157745788876433-55415


Q ss_pred             HHHHHHHCCCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCEECCC------CCHH------HHHHHHHCCCEEEEC
Q ss_conf             2234431043110011101154334520589999999887589472247------7734------899998089889971
Q gi|254780801|r  144 DFVILCRQKYQLNVEGLMCIPPAMGNPKPHFYLLSEIARECKLTKLSMG------MTRD------FELAIASGATSVRIG  211 (222)
Q Consensus       144 ~l~~~i~~~~~L~i~GLMti~p~~~d~~~~F~~l~~l~~~~~~~~LSmG------MS~D------~~~Ai~~Gst~vRiG  211 (222)
                      .........  ..-.|+-.+.....+    -..++.+... .+..++=|      -.+|      .+.|++.||+.+=||
T Consensus       149 ~~~~~~a~~--~~~~~~~g~~~~~~~----~~~~~~~~~~-~~~~~tPGI~~~~~~~~dq~r~~tp~~Ai~~GaD~iIVG  221 (245)
T 1eix_A          149 DYAERLAAL--TQKCGLDGVVCSAQE----AVRFKQVFGQ-EFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIG  221 (245)
T ss_dssp             HHHHHHHHH--HHHTTCSEEECCGGG----HHHHHHHHCS-SSEEEECCBCCTTCCCTTCCSCBCHHHHHHTTCSEEEEC
T ss_pred             HHHHHHHHH--HHHCCCCCCCCCHHH----HHHHHHHHCC-CCCEECCCCCCCCCCCCCCEECCCHHHHHHCCCCEEEEC
T ss_conf             799999988--876086754355588----9999986076-553657871447887677610179999998699999989


Q ss_pred             HHHCCCCC
Q ss_conf             13238999
Q gi|254780801|r  212 SGIFGERP  219 (222)
Q Consensus       212 s~iFG~R~  219 (222)
                      ++|..+.+
T Consensus       222 R~I~~a~d  229 (245)
T 1eix_A          222 RPVTQSVD  229 (245)
T ss_dssp             HHHHTSSS
T ss_pred             CCCCCCCC
T ss_conf             73358999


No 51 
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=63.21  E-value=6.6  Score=19.23  Aligned_cols=140  Identities=14%  Similarity=0.109  Sum_probs=68.8

Q ss_pred             CCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCCC-CHH--CCCCCCCCHHHHHHHHHHHHCCCEEEEE-EEECC
Q ss_conf             0121000111100000125873023024432001320111-000--0122222001344333333114303688-97004
Q gi|254780801|r   54 AENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVSL-FDV--IETVSREKTASLLSLEMIKQSRFLPVYI-QVNTG  129 (222)
Q Consensus        54 GENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~~-~~~--Ihsvds~~~a~~L~~~~~~~~~~~~vli-QVN~~  129 (222)
                      |.+-+.++.++  .++=..|.++|=||+--.+-++.+..+ +++  ||+..-..-.++..   ...++  .++. -+=++
T Consensus        47 G~~~i~~L~~~--g~~IflDlKl~DIpnTv~~~v~~~~~~g~d~vtvH~~~G~~~l~~a~---~~~~~--~il~Vt~LTS  119 (213)
T 1vqt_A           47 GKKIFDELAKR--NLKIILDLKFCDIPSTVERSIKSWDHPAIIGFTVHSCAGYESVERAL---SATDK--HVFVVVKLTS  119 (213)
T ss_dssp             CTHHHHHHHTT--TCEEEEEEEECSCHHHHHHHHHHHCCTTEEEEEEEGGGCHHHHHHHH---HHCSS--EEEEECCCTT
T ss_pred             HHHHHHHHHHC--CCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH---HCCCC--CEEEEEEECC
T ss_conf             09999999977--99689984215747999999999870699799987868899999998---50357--4469998447


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCEECCCC-----CHH-----HHH
Q ss_conf             6656346570001222344310431100111011543345205899999998875894722477-----734-----899
Q gi|254780801|r  130 YEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCIPPAMGNPKPHFYLLSEIARECKLTKLSMGM-----TRD-----FEL  199 (222)
Q Consensus       130 ~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMti~p~~~d~~~~F~~l~~l~~~~~~~~LSmGM-----S~D-----~~~  199 (222)
                          -.|. .+   +....+..+..+.+.|+.+ +|          ....+.+++....++=|-     ++|     -..
T Consensus       120 ----~~~~-~~---~~~~~~~~l~~~g~dgvv~-~~----------~~~~~~~~~~~~iitPGIr~~~~~dDQkrv~t~~  180 (213)
T 1vqt_A          120 ----MEGS-LE---DYMDRIEKLNKLGCDFVLP-GP----------WAKALREKIKGKILVPGIRMEVKADDQKDVVTLE  180 (213)
T ss_dssp             ----SCCC-HH---HHHHHHHHHHHHTCEEECC-HH----------HHHHHTTTCCSCEEECCBC---------CCBCHH
T ss_pred             ----CCCC-HH---HHHHHHHHHHHHCCCCCCC-CH----------HHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCHH
T ss_conf             ----7754-38---9999999987633475667-40----------8999999808986716726677789874227899


Q ss_pred             HHHHCCCEEEECHHHCCCCC
Q ss_conf             99808988997113238999
Q gi|254780801|r  200 AIASGATSVRIGSGIFGERP  219 (222)
Q Consensus       200 Ai~~Gst~vRiGs~iFG~R~  219 (222)
                      |++.||+.+=||++|..+-+
T Consensus       181 ai~~GAD~iVVGR~I~~a~d  200 (213)
T 1vqt_A          181 EMKGIANFAVLGREIYLSEN  200 (213)
T ss_dssp             HHTTTCSEEEESHHHHTSSC
T ss_pred             HHHCCCCEEEECCCCCCCCC
T ss_conf             99849999998964568999


No 52 
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=61.01  E-value=9.1  Score=18.27  Aligned_cols=108  Identities=10%  Similarity=0.034  Sum_probs=57.6

Q ss_pred             CHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCC-CCHHHHHHHHHHCCCCCCHHHHEE-CCCCCC-CCHHHHHHHHHH
Q ss_conf             00134433333311430368897004665634657-000122234431043110011101-154334-520589999999
Q gi|254780801|r  104 KTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIM-PNQTKDFVILCRQKYQLNVEGLMC-IPPAMG-NPKPHFYLLSEI  180 (222)
Q Consensus       104 ~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~-p~el~~l~~~i~~~~~L~i~GLMt-i~p~~~-d~~~~F~~l~~l  180 (222)
                      +.+.++..+|.+.+  +++++++=+-+........ |+.+...+....+ .++.+  +-+ .|.... ...+....++++
T Consensus       142 ~~l~~l~~~c~~~g--~p~llE~~~~~~~~~d~~~~~~~i~~a~r~~~e-~G~Di--~K~~~P~~~~~~~~~~~~~~~~~  216 (304)
T 1to3_A          142 NMVKEFNELCHSNG--LLSIIEPVVRPPRCGDKFDREQAIIDAAKELGD-SGADL--YKVEMPLYGKGARSDLLTASQRL  216 (304)
T ss_dssp             HHHHHHHHHHHTTT--CEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTT-SSCSE--EEECCGGGGCSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCC--CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH-CCCCE--EEEECCCCCCHHHHHHHHHHHHH
T ss_conf             99999999998639--966999851477766541079999999999987-39987--99978877532246899999998


Q ss_pred             HHHCC--CCEECCCCCH-----HHHHHHHHCCCEEEECHHHCC
Q ss_conf             88758--9472247773-----489999808988997113238
Q gi|254780801|r  181 ARECK--LTKLSMGMTR-----DFELAIASGATSVRIGSGIFG  216 (222)
Q Consensus       181 ~~~~~--~~~LSmGMS~-----D~~~Ai~~Gst~vRiGs~iFG  216 (222)
                      .+...  .-.||-|++.     -++.|++.|+.=+=+|++||-
T Consensus       217 ~~~~~~p~vvLggg~~~e~f~~~l~~A~~aGa~G~~~GR~iwq  259 (304)
T 1to3_A          217 NGHINMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWS  259 (304)
T ss_dssp             HHTCCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHG
T ss_pred             HCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECHHHHH
T ss_conf             5158994899828989899999999999769939985626434


No 53 
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid, csgid, Mg-bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} PDB: 3ieb_A*
Probab=59.64  E-value=3.7  Score=20.94  Aligned_cols=150  Identities=10%  Similarity=0.054  Sum_probs=71.9

Q ss_pred             CCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCCCCH--HCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC
Q ss_conf             00012100011110000012587302302443200132011100--0012222200134433333311430368897004
Q gi|254780801|r   52 IFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVSLFD--VIETVSREKTASLLSLEMIKQSRFLPVYIQVNTG  129 (222)
Q Consensus        52 ~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~~~~--~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~  129 (222)
                      .||-.-+.+++++...++=..|++.|=||..-...++..  .+|  .+|.......++++.+.+.+.+....  +-++..
T Consensus        44 ~~G~~~i~~l~~~~~~~~i~~D~K~~Di~~~~~~~~~~~--gad~itvh~~~~~~~l~~~~~~~~~~g~~~~--v~l~~~  119 (218)
T 3jr2_A           44 AEGMKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEA--GADWITVSAAAHIATIAACKKVADELNGEIQ--IEIYGN  119 (218)
T ss_dssp             HHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHH--TCSEEEEETTSCHHHHHHHHHHHHHHTCEEE--EECCSS
T ss_pred             HCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH--CCCEEEEECCCCHHHHHHHHHHHHHCCCCEE--EECCCC
T ss_conf             359999999997578973999985145727788998874--4989999503454789999998764188437--842788


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEEC-CCCCCC---CHHHHHHHHHHHHHCCC-CEECCCCC-HHHHHHHHH
Q ss_conf             6656346570001222344310431100111011-543345---20589999999887589-47224777-348999980
Q gi|254780801|r  130 YEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCI-PPAMGN---PKPHFYLLSEIARECKL-TKLSMGMT-RDFELAIAS  203 (222)
Q Consensus       130 ~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMti-~p~~~d---~~~~F~~l~~l~~~~~~-~~LSmGMS-~D~~~Ai~~  203 (222)
                      .       +++....+.+.     ++...-+|+. ++....   +-.....++++... +. -...=|.+ .+...|++.
T Consensus       120 ~-------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~-~~~i~v~gGi~~~~~~~~~~~  186 (218)
T 3jr2_A          120 W-------TMQDAKAWVDL-----GITQAIYHRSRDAELAGIGWTTDDLDKMRQLSAL-GIELSITGGIVPEDIYLFEGI  186 (218)
T ss_dssp             C-------CHHHHHHHHHT-----TCCEEEEECCHHHHHHTCCSCHHHHHHHHHHHHT-TCEEEEESSCCGGGGGGGTTS
T ss_pred             C-------CHHHHHHHHHC-----CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC-CCCEEECCCCCCCCHHHHHHC
T ss_conf             9-------99999998864-----8228699972442447736689999999998489-970786799682579999984


Q ss_pred             CCCEEEECHHHCCCC
Q ss_conf             898899711323899
Q gi|254780801|r  204 GATSVRIGSGIFGER  218 (222)
Q Consensus       204 Gst~vRiGs~iFG~R  218 (222)
                      ||+.+=+||+||++.
T Consensus       187 GaD~iVvGraI~~a~  201 (218)
T 3jr2_A          187 KTKTFIAGRALAGAE  201 (218)
T ss_dssp             CEEEEEESGGGSHHH
T ss_pred             CCCEEEECHHHCCCC
T ss_conf             999999883660799


No 54 
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=58.76  E-value=9.9  Score=18.02  Aligned_cols=97  Identities=16%  Similarity=0.179  Sum_probs=58.3

Q ss_pred             CCEEEEEEEECC---CCCC------CCC--CCCCHHHHHHHHHHCCCC--CCHHHHEECCCCCCCCHHHHHHHHHHHHHC
Q ss_conf             430368897004---6656------346--570001222344310431--100111011543345205899999998875
Q gi|254780801|r  118 RFLPVYIQVNTG---YEIQ------KSG--IMPNQTKDFVILCRQKYQ--LNVEGLMCIPPAMGNPKPHFYLLSEIAREC  184 (222)
Q Consensus       118 ~~~~vliQVN~~---~e~~------K~G--~~p~el~~l~~~i~~~~~--L~i~GLMti~p~~~d~~~~F~~l~~l~~~~  184 (222)
                      ....+.++.-++   +.+.      +..  -.|+++.+|++... ..-  +.+-=.-.+-+....|+-.|..++++++..
T Consensus       125 h~~gv~VEaElG~igg~e~~~~~~~~~~~~T~Peea~~Fv~~Tg-vD~LAvaiGn~HG~yk~~~~p~ld~~~l~~I~~~~  203 (307)
T 3n9r_A          125 HNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQ-VDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLT  203 (307)
T ss_dssp             HHTTCEEEEEESCCCCC----------CCSCCHHHHHHHHHHHC-CSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHH
T ss_pred             HHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC-CCEECHHHCCCCCCCCCCCCCCCCHHHHHHHHHHC
T ss_conf             25398289874121576787665553212479899999987108-87342211223367778898776899999988505


Q ss_pred             CCCEECCCCC-------------------------HHHHHHHHHCCCEEEECHHHC
Q ss_conf             8947224777-------------------------348999980898899711323
Q gi|254780801|r  185 KLTKLSMGMT-------------------------RDFELAIASGATSVRIGSGIF  215 (222)
Q Consensus       185 ~~~~LSmGMS-------------------------~D~~~Ai~~Gst~vRiGs~iF  215 (222)
                      ..+--.=|.|                         .++..||++|-.=|-|||.+.
T Consensus       204 ~vPLVlHG~S~v~d~~~~~~~~~~~~~HG~sG~p~e~i~~ai~~Gi~KiNi~T~l~  259 (307)
T 3n9r_A          204 NIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGGINKVNTDTDLR  259 (307)
T ss_dssp             CSCEEESSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEEECHHHH
T ss_pred             CCCEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECHHHH
T ss_conf             88655478876617777764012334678889999999999977946999787999


No 55 
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=58.30  E-value=7.4  Score=18.88  Aligned_cols=157  Identities=13%  Similarity=0.100  Sum_probs=74.4

Q ss_pred             CCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCCC-CHH--CCCCCCCCHHHHHHHHHHHH---CCCEEEEEE
Q ss_conf             000121000111100000125873023024432001320111-000--01222220013443333331---143036889
Q gi|254780801|r   52 IFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVSL-FDV--IETVSREKTASLLSLEMIKQ---SRFLPVYIQ  125 (222)
Q Consensus        52 ~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~~-~~~--Ihsvds~~~a~~L~~~~~~~---~~~~~vliQ  125 (222)
                      .+|..-+.++.+..  +.=..|.++|=||+.=.+-++.+... +|+  +|+.......+.....+.+.   ......++.
T Consensus        42 ~~G~~~i~~l~~~~--~~If~DlK~~DIgnTv~~~~~~~~~~~~d~~tvh~~~g~~~~~aa~~~~~~~~~~~~~~~~~~~  119 (246)
T 2yyu_A           42 QEGPAIVAFLKEQG--HAVFLDLKLHDIPNTVKQAMKGLARVGADLVNVHAAGGRRMMEAAIEGLDAGTPSGRMRPRCIA  119 (246)
T ss_dssp             HHTHHHHHHHHHTT--CEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGGGCHHHHHHHHHHHHHHSCSSSCCCEEEE
T ss_pred             HHCHHHHHHHHHCC--CCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf             40999999999749--9889996325628999999999985287299994578807899999975421000466652799


Q ss_pred             EE-CCCCC-----CCCCCCCCHHHHHHHHH-HCCCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCEECCC------
Q ss_conf             70-04665-----63465700012223443-1043110011101154334520589999999887589472247------
Q gi|254780801|r  126 VN-TGYEI-----QKSGIMPNQTKDFVILC-RQKYQLNVEGLMCIPPAMGNPKPHFYLLSEIARECKLTKLSMG------  192 (222)
Q Consensus       126 VN-~~~e~-----~K~G~~p~el~~l~~~i-~~~~~L~i~GLMti~p~~~d~~~~F~~l~~l~~~~~~~~LSmG------  192 (222)
                      +- .+...     ...|.. ..+.+.+.+. .....-.+.|+.|-|.       ....+++.... .+..++=|      
T Consensus       120 ~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~a~~a~~~g~~g~v~s~~-------~~~~ir~~~~~-~~~ivtPGI~~~~~  190 (246)
T 2yyu_A          120 VTQLTSTDERMLHEELWIS-RPLVETVAHYAALAKESGLDGVVCSAN-------EAAFIKERCGA-SFLAVTPGIRFADD  190 (246)
T ss_dssp             ESSCTTCCHHHHHHTSCCC-SCHHHHHHHHHHHHHHHTCCEEECCHH-------HHHHHHHHHCT-TSEEEECCCCCCC-
T ss_pred             EEECCCCHHHHHHHHCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHHCCC-CEEEEECCCCCCCC
T ss_conf             9842672067765311211-007899999998999739853005627-------89999986498-72998267356778


Q ss_pred             CCHH------HHHHHHHCCCEEEECHHHCCCCC
Q ss_conf             7734------89999808988997113238999
Q gi|254780801|r  193 MTRD------FELAIASGATSVRIGSGIFGERP  219 (222)
Q Consensus       193 MS~D------~~~Ai~~Gst~vRiGs~iFG~R~  219 (222)
                      ..+|      ...|++.||+.+=||++|.++.+
T Consensus       191 ~~~Dq~r~~tp~~Ai~~GaD~iIVGR~I~~a~d  223 (246)
T 2yyu_A          191 AAHDQVRVVTPRKARALGSDYIVIGRSLTRAAD  223 (246)
T ss_dssp             ------CCCCHHHHHHHTCSEEEECHHHHTSSS
T ss_pred             CCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             877714027999999849999998952368999


No 56 
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=54.92  E-value=8.5  Score=18.47  Aligned_cols=37  Identities=14%  Similarity=0.227  Sum_probs=20.9

Q ss_pred             HHHHHHHCCC---CEECCC-CCHHHHHHHHHCCCEEEECHH
Q ss_conf             9999887589---472247-773489999808988997113
Q gi|254780801|r  177 LSEIARECKL---TKLSMG-MTRDFELAIASGATSVRIGSG  213 (222)
Q Consensus       177 l~~l~~~~~~---~~LSmG-MS~D~~~Ai~~Gst~vRiGs~  213 (222)
                      +..+.+.+++   ..+-.| ...|.+.|-+.|-.-|-|++.
T Consensus       151 ~~~~~~~~g~~p~~~l~vgD~~~di~aA~~aG~~~i~v~~~  191 (221)
T 2wf7_A          151 FIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRP  191 (221)
T ss_dssp             HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCH
T ss_pred             HHHHHHHHCCCHHHEEEECCCHHHHHHHHHCCCEEEEECCH
T ss_conf             99999993978678798828988999999859999999974


No 57 
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, structural genomics, joint center for structural genomics, JCSG; 1.91A {Haemophilus somnus 129PT}
Probab=53.87  E-value=12  Score=17.49  Aligned_cols=66  Identities=15%  Similarity=0.217  Sum_probs=40.7

Q ss_pred             CCCCCHHHHEECCCCCC-CC--HHHHHHHHHHHHH---CCCC---EECCCCCHHH-HHHHHHCC--CEEEECHHHCCC
Q ss_conf             43110011101154334-52--0589999999887---5894---7224777348-99998089--889971132389
Q gi|254780801|r  152 KYQLNVEGLMCIPPAMG-NP--KPHFYLLSEIARE---CKLT---KLSMGMTRDF-ELAIASGA--TSVRIGSGIFGE  217 (222)
Q Consensus       152 ~~~L~i~GLMti~p~~~-d~--~~~F~~l~~l~~~---~~~~---~LSmGMS~D~-~~Ai~~Gs--t~vRiGs~iFG~  217 (222)
                      ++.+...=+||+-|-.. ..  ...+.+.+++++-   .+..   +.-=|.+.+- +...+.|+  +.+=.||+||+.
T Consensus       146 l~~iD~VlvMsV~PG~~Gq~f~~~~l~ki~~l~~~~~~~~~~~~I~VDGGIn~~~i~~l~~aga~vd~~V~GS~iF~~  223 (237)
T 3cu2_A          146 LDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMTLELAKYFKQGTHQIDWLVSGSALFSG  223 (237)
T ss_dssp             TTTCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCCHHHHHHHHHSSSCCCCEEECGGGGSS
T ss_pred             HCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEECCCEECC
T ss_conf             455786999987789887678821889999999999707998069997994889999999734899989968430496


No 58 
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 1loq_A* 1lor_A* 1kly_A* 3lhz_A* 3m44_A 3lhw_A* ...
Probab=49.41  E-value=6.5  Score=19.25  Aligned_cols=152  Identities=12%  Similarity=0.043  Sum_probs=75.1

Q ss_pred             CCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCC-CCHH--CCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC
Q ss_conf             0012100011110000012587302302443200132011-1000--012222200134433333311430368897004
Q gi|254780801|r   53 FAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVS-LFDV--IETVSREKTASLLSLEMIKQSRFLPVYIQVNTG  129 (222)
Q Consensus        53 fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~-~~~~--Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~  129 (222)
                      +|-+-+.++.++... +=..|.++|=||+.=..=++.+.+ .+|+  ||..-.....+...+.+.+.+..  +++-..++
T Consensus        51 ~G~~~i~~l~~~~~~-~if~D~K~~DIp~T~~~~~~~~~~~gad~~TVh~~~g~~~i~~~~~~~~~~~~~--v~~l~~~s  127 (228)
T 3m47_A           51 EGMDIIAEFRKRFGC-RIIADFKVADIPETNEKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGRE--VFLLTEMS  127 (228)
T ss_dssp             HCTHHHHHHHHHHCC-EEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCE--EEEECCCC
T ss_pred             CCHHHHHHHHHHCCC-CEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCE--EEEEEECC
T ss_conf             398999999976898-299960100077799999999985599899996679978999999998840980--48986226


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHCC--CCEECCCC---CHHHHHHHHHC
Q ss_conf             66563465700012223443104311001110115433452058999999988758--94722477---73489999808
Q gi|254780801|r  130 YEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCIPPAMGNPKPHFYLLSEIARECK--LTKLSMGM---TRDFELAIASG  204 (222)
Q Consensus       130 ~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMti~p~~~d~~~~F~~l~~l~~~~~--~~~LSmGM---S~D~~~Ai~~G  204 (222)
                      .....- +......+++....   +..+.|+.+++-.       ...++.+++.++  +..++=|-   ++|-..++ .|
T Consensus       128 ~~~~~~-~~~~~~~~~~~l~~---~~g~~g~v~~~~~-------~~ei~~ir~~~~~~~~~vtPGI~~~g~~~~d~~-~~  195 (228)
T 3m47_A          128 HPGAEM-FIQGAADEIARMGV---DLGVKNYVGPSTR-------PERLSRLREIIGQDSFLISPGVGAQGGDPGETL-RF  195 (228)
T ss_dssp             SGGGGT-THHHHHHHHHHHHH---HTTCCEEECCSSC-------HHHHHHHHHHHCSSSEEEECC---------CGG-GT
T ss_pred             CCHHHH-HHHHHHHHHHHHHH---HHCCCCCCCCCCC-------HHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHH-HH
T ss_conf             620778-88889999999999---7188750225578-------999999998459871799667657889977887-54


Q ss_pred             CCEEEECHHHCCCCC
Q ss_conf             988997113238999
Q gi|254780801|r  205 ATSVRIGSGIFGERP  219 (222)
Q Consensus       205 st~vRiGs~iFG~R~  219 (222)
                      ++.+-||++|+.+++
T Consensus       196 ad~iIvGR~I~~a~d  210 (228)
T 3m47_A          196 ADAIIVGRSIYLADN  210 (228)
T ss_dssp             CSEEEECHHHHTSSC
T ss_pred             CCEEEECCHHCCCCC
T ss_conf             999998900203999


No 59 
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJM; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=42.70  E-value=18  Score=16.36  Aligned_cols=114  Identities=12%  Similarity=0.158  Sum_probs=64.2

Q ss_pred             CCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCC--CCCCHHHHEECCCCCCCCHHHHH-HHH
Q ss_conf             220013443333331143036889700466563465700012223443104--31100111011543345205899-999
Q gi|254780801|r  102 REKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQK--YQLNVEGLMCIPPAMGNPKPHFY-LLS  178 (222)
Q Consensus       102 s~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~--~~L~i~GLMti~p~~~d~~~~F~-~l~  178 (222)
                      |.+++.++-+...+. ..-++.+.++.+ +....|..+++...+++.+.+.  .-+.+.+-....+....+...|. ..+
T Consensus       193 R~Rf~~Eii~avr~~-v~~~~~vri~~~-~~~~~g~~~~~~~~~~~~l~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (338)
T 1z41_A          193 RYRFLREIIDEVKQV-WDGPLFVRVSAS-DYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAE  270 (338)
T ss_dssp             HHHHHHHHHHHHHHH-CCSCEEEEEECC-CCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHH
T ss_pred             HHHHHHHHHHHHHHH-HCCCCEEEECCC-CCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf             788999999999998-546764885454-345788644669999999998397400013343013544468862078999


Q ss_pred             HHHHHCCCCEECCCCCH---HHHHHHHHC-CCEEEECHHHCCC
Q ss_conf             99887589472247773---489999808-9889971132389
Q gi|254780801|r  179 EIARECKLTKLSMGMTR---DFELAIASG-ATSVRIGSGIFGE  217 (222)
Q Consensus       179 ~l~~~~~~~~LSmGMS~---D~~~Ai~~G-st~vRiGs~iFG~  217 (222)
                      .+++....+.+.-|.=.   +-+.+|++| +.+|=+|+.+...
T Consensus       271 ~ik~~~~~pvi~~G~i~~~~~ae~~l~~g~~D~V~~gR~~iad  313 (338)
T 1z41_A          271 KIREQADMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRD  313 (338)
T ss_dssp             HHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHC
T ss_pred             HHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHC
T ss_conf             9998759528996894999999999987995523865998869


No 60 
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} PDB: 3hf3_A*
Probab=42.32  E-value=18  Score=16.32  Aligned_cols=100  Identities=14%  Similarity=0.187  Sum_probs=59.4

Q ss_pred             HCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCH---HHHEECCCCCCCC-HHHH-HHHHHHHHHCCCCEEC
Q ss_conf             114303688970046656346570001222344310431100---1110115433452-0589-9999998875894722
Q gi|254780801|r  116 QSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQKYQLNV---EGLMCIPPAMGNP-KPHF-YLLSEIARECKLTKLS  190 (222)
Q Consensus       116 ~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~~~L~i---~GLMti~p~~~d~-~~~F-~~l~~l~~~~~~~~LS  190 (222)
                      .+...+|.+.++.. |..+.|..++|...++..+.+. ++.+   -+-.......... ...+ .....+++....+...
T Consensus       216 vg~~~~i~~R~s~~-d~~~~g~~~ee~~~~~~~l~~~-g~d~~~~s~~~~~~~~~~~~~~~~~~~~~~~ik~~~~ipvi~  293 (349)
T 3hgj_A          216 VPRELPLFVRVSAT-DWGEGGWSLEDTLAFARRLKEL-GVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGA  293 (349)
T ss_dssp             SCTTSCEEEEEESC-CCSTTSCCHHHHHHHHHHHHHT-TCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEE
T ss_pred             CCCCCEEEEECCCC-CCCCCCCCHHHHHHHHHHHHHC-CCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEE
T ss_conf             08997289967702-1467998779999999999875-975164125642124345667643368999999875996899


Q ss_pred             CCCC---HHHHHHHHHC-CCEEEECHHHCCC
Q ss_conf             4777---3489999808-9889971132389
Q gi|254780801|r  191 MGMT---RDFELAIASG-ATSVRIGSGIFGE  217 (222)
Q Consensus       191 mGMS---~D~~~Ai~~G-st~vRiGs~iFG~  217 (222)
                      -|.-   .+-+.+|++| +.+|=+|+.+...
T Consensus       294 ~G~i~~~e~ae~~l~~g~~D~V~~gR~~iad  324 (349)
T 3hgj_A          294 VGLITTPEQAETLLQAGSADLVLLGRVLLRD  324 (349)
T ss_dssp             CSSCCCHHHHHHHHHTTSCSEEEESTHHHHC
T ss_pred             ECCCCCHHHHHHHHHCCCCCHHHHHHHHHHC
T ss_conf             8893999999999987992115988999869


No 61 
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=40.51  E-value=7.2  Score=18.97  Aligned_cols=181  Identities=11%  Similarity=0.041  Sum_probs=87.2

Q ss_pred             CEEEEECCCCCHHHHHHHHH-C---------C---CCCCCCCCCHHHHHHHHC--CCCCCCCCEEEECCCCCCHHHHH--
Q ss_conf             18998718999999999997-2---------9---810001210001111000--00125873023024432001320--
Q gi|254780801|r   28 VSLVAVSKMVDSKKIRVALS-C---------G---QVIFAENKLQEAKKKWIP--LRKEWDVQLRFIGSLQSNKVSEI--   90 (222)
Q Consensus        28 v~LiaVtK~~~~e~I~~~~~-~---------G---~~~fGENrvQE~~~K~~~--l~~~~~i~wHfIG~LQsNKvk~i--   90 (222)
                      -+|+..-=..+.+++..+.+ +         |   +.+||..-++++.+.+..  +.=..|.++|=||+.-..-+...  
T Consensus        84 s~L~vAlD~~s~~e~l~la~~l~p~I~~lKig~~li~~~G~~~I~~L~~~a~~~~~~If~DlK~~DIgnTv~~~~~~~~~  163 (312)
T 3g3d_A           84 TNLCLSADVSLARELLQLADALGPSICMLKTHVDILNDFTLDVMKELITLAKCHEFLIFEDRKFADIGNTVKKQYEGGIF  163 (312)
T ss_dssp             CCEEEECCCSCHHHHHHHHHHHGGGCSEEEECGGGCTTCCHHHHHHHHHHHHHHTCEEEEEEEECSCHHHHHHHHHCTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHCCCCEEEEECHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf             88899963699999999999848852699987899743799999999998764597699742226834589999999998


Q ss_pred             --CCCCH--HCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHC-CCCCCHHHHEECCC
Q ss_conf             --11100--00122222001344333333114303688970046656346570001222344310-43110011101154
Q gi|254780801|r   91 --VSLFD--VIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQ-KYQLNVEGLMCIPP  165 (222)
Q Consensus        91 --~~~~~--~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~-~~~L~i~GLMti~p  165 (222)
                        ..++|  .+|.+......+.+.+.+...+  ..|++=...+...+   ....+..+....+.. .+...+ |..+-.+
T Consensus       164 ~~~~~adivTvh~~~G~~~i~~~~~~~~~~~--~gv~lLt~~s~~~~---~~~~~~~~~~~~~a~~~~~~~~-g~v~~s~  237 (312)
T 3g3d_A          164 KIASWADLVNAHVVPGSGVVKGLQEVGLPLH--RGCLLIAEMSSTGS---LATGDYTRAAVRMAEEHSEFVV-GFISGSR  237 (312)
T ss_dssp             CHHHHCSEEEEESTTCTHHHHHHHHHHTTTT--CEEEEECCCSSTTC---CCCHHHHHHHHHHHHHTTTTEE-EEECSSC
T ss_pred             HHHCCCCEEEEECCCCHHHHHHHHHHHCCCC--CCCEEEEEECCHHH---HHCCCHHHHHHHHHHHHHHCCC-CEEEHHH
T ss_conf             6303465687514786788999997401036--55159998233233---3214689999999997054475-7043121


Q ss_pred             CCCCCHHHHHHHHHHHHHCCCCEECCCC---CHHHHHHH-HHCCCEEEECHHHCCCCC
Q ss_conf             3345205899999998875894722477---73489999-808988997113238999
Q gi|254780801|r  166 AMGNPKPHFYLLSEIARECKLTKLSMGM---TRDFELAI-ASGATSVRIGSGIFGERP  219 (222)
Q Consensus       166 ~~~d~~~~F~~l~~l~~~~~~~~LSmGM---S~D~~~Ai-~~Gst~vRiGs~iFG~R~  219 (222)
                      ....  +.|..   +.--+++...+=|.   -.+-+.|| +.||+++=||+.|..+.+
T Consensus       238 ~~~~--~~~~~---vtPGIrl~~~~~~~g~q~~TP~~Ai~~~GaDiiVVGR~It~A~D  290 (312)
T 3g3d_A          238 VSMK--PEFLH---LTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAAD  290 (312)
T ss_dssp             CCCC--TTSEE---EECSBCSSSEECTTSCEEBCHHHHHHTTCCSEEEESHHHHTSSS
T ss_pred             HHCC--CCEEE---ECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             3206--52389---54884536689998877689999998659989998921368989


No 62 
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=33.15  E-value=25  Score=15.37  Aligned_cols=71  Identities=11%  Similarity=0.096  Sum_probs=47.2

Q ss_pred             CCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCC-CHHHHHCCCCHH-CCCCCCCCHHHHHHHHHHHHCCCE
Q ss_conf             981000121000111100000125873023024432-001320111000-012222200134433333311430
Q gi|254780801|r   49 GQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQS-NKVSEIVSLFDV-IETVSREKTASLLSLEMIKQSRFL  120 (222)
Q Consensus        49 G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQs-NKvk~i~~~~~~-Ihsvds~~~a~~L~~~~~~~~~~~  120 (222)
                      ...++|.++++-+.++...+....++.+|. ..+.. +-....+..+|+ |-++|+...-..++..|.+.++++
T Consensus        64 ~~~dIG~~Ka~~a~~~l~~~np~v~i~~~~-~~i~~~~~~~~f~~~~dvVi~alDn~~aR~~vn~~c~~~~iPl  136 (640)
T 1y8q_B           64 QKKHVGRSKAQVAKESVLQFYPKANIVAYH-DSIMNPDYNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPL  136 (640)
T ss_dssp             CGGGTTSBHHHHHHHHHHTTCTTCEEEEEE-SCTTSTTSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHTCCE
T ss_pred             CHHHCCCHHHHHHHHHHHHHCCCCEEEEEC-CCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCE
T ss_conf             945678879999999999878998799972-5657830389997259999989999999999999999849987


No 63 
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=30.93  E-value=27  Score=15.13  Aligned_cols=155  Identities=14%  Similarity=0.186  Sum_probs=73.3

Q ss_pred             CCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCCC-CHH--CCCCCCCCHHHHHHHHHHHH----CCCEEEEEE
Q ss_conf             00121000111100000125873023024432001320111-000--01222220013443333331----143036889
Q gi|254780801|r   53 FAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVSL-FDV--IETVSREKTASLLSLEMIKQ----SRFLPVYIQ  125 (222)
Q Consensus        53 fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~~-~~~--Ihsvds~~~a~~L~~~~~~~----~~~~~vliQ  125 (222)
                      +|-.-+.++.++  .++=..|.++|=||+.-..-++.+... +|+  +|++.-....+.....+.+.    ...+.++.-
T Consensus        42 ~G~~~i~~l~~~--~~~If~D~K~~DIgnTv~~~~~~~~~~~ad~vtvh~~~G~~~l~aa~~~~~~~~~~~~~~~~ll~v  119 (239)
T 1dbt_A           42 EGPSIVKQLKER--NCELFLDLKLHDIPTTVNKAMKRLASLGVDLVNVHAAGGKKMMQAALEGLEEGTPAGKKRPSLIAV  119 (239)
T ss_dssp             HTHHHHHHHHHT--TCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGGCHHHHHHHHHHHHHHSCTTSCCCEEEEE
T ss_pred             CCHHHHHHHHHC--CCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             498999999976--982999851147478999998744125676899927773889999998765421202677506899


Q ss_pred             EECCCC---CCCC-CCCCCHHHHHHHHH-HCCCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHC--CCCEECCC------
Q ss_conf             700466---5634-65700012223443-10431100111011543345205899999998875--89472247------
Q gi|254780801|r  126 VNTGYE---IQKS-GIMPNQTKDFVILC-RQKYQLNVEGLMCIPPAMGNPKPHFYLLSEIAREC--KLTKLSMG------  192 (222)
Q Consensus       126 VN~~~e---~~K~-G~~p~el~~l~~~i-~~~~~L~i~GLMti~p~~~d~~~~F~~l~~l~~~~--~~~~LSmG------  192 (222)
                      .-.+.-   ..+. ......+.+.+... .......+.|+.|-|-          .+..+++..  .+..++=|      
T Consensus       120 ~~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~a~~~~~~g~v~~~~----------~~~~~r~~~~~~~~ivtPGI~~~~~  189 (239)
T 1dbt_A          120 TQLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCSVH----------EAKAIYQAVSPSFLTVTPGIRMSED  189 (239)
T ss_dssp             CSCTTCCHHHHHHTSCBCSCHHHHHHHHHHHHHHTTCSEEECCGG----------GHHHHTTTSCTTCEEEECCBCCTTS
T ss_pred             EECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEECCHH----------HHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             713775468898754204515688999999999849962106548----------8999997426750898556344677


Q ss_pred             CCHH------HHHHHHHCCCEEEECHHHCCCCC
Q ss_conf             7734------89999808988997113238999
Q gi|254780801|r  193 MTRD------FELAIASGATSVRIGSGIFGERP  219 (222)
Q Consensus       193 MS~D------~~~Ai~~Gst~vRiGs~iFG~R~  219 (222)
                      -.+|      ...|++.||+.+=||++|..+.+
T Consensus       190 ~~~dq~r~~tp~~ai~~Gad~iIVGR~I~~a~d  222 (239)
T 1dbt_A          190 AANDQVRVATPAIAREKGSSAIVVGRSITKAED  222 (239)
T ss_dssp             CCTTCSSCBCHHHHHHTTCSEEEECHHHHTSSC
T ss_pred             CCCCCEECCCHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             778863017999999879999998985668999


No 64 
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural genomics, joint center for structural genomics, JCSG; 2.18A {Thermotoga maritima MSB8} SCOP: c.1.5.1
Probab=30.04  E-value=28  Score=15.03  Aligned_cols=51  Identities=29%  Similarity=0.399  Sum_probs=37.1

Q ss_pred             HHHHHHHHHH---HHHCCCCEECCC---CCHHHHHHHHHCCCEEEECHHHCCCCCCC
Q ss_conf             0589999999---887589472247---77348999980898899711323899999
Q gi|254780801|r  171 KPHFYLLSEI---ARECKLTKLSMG---MTRDFELAIASGATSVRIGSGIFGERPCQ  221 (222)
Q Consensus       171 ~~~F~~l~~l---~~~~~~~~LSmG---MS~D~~~Ai~~Gst~vRiGs~iFG~R~~~  221 (222)
                      .+.+....+-   +.+.+.+.++.|   -|+|.--||.+||+.|=+|+.+=|....+
T Consensus       323 ~pq~sav~~~~~~~~~~~v~iiADGGi~~~gdi~KAla~GAd~VMlGs~lAg~~EsP  379 (494)
T 1vrd_A          323 VPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMVGSIFAGTEEAP  379 (494)
T ss_dssp             CCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSS
T ss_pred             CHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCHHHHCHHHCCCCCCC
T ss_conf             217889999999986559669934885766669999872776623332532654589


No 65 
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=27.71  E-value=30  Score=14.77  Aligned_cols=49  Identities=27%  Similarity=0.386  Sum_probs=34.9

Q ss_pred             HHHHHHH---HHHHHCCCCEEC---CCCCHHHHHHHHHCCCEEEECHHHCCCCCC
Q ss_conf             5899999---998875894722---477734899998089889971132389999
Q gi|254780801|r  172 PHFYLLS---EIARECKLTKLS---MGMTRDFELAIASGATSVRIGSGIFGERPC  220 (222)
Q Consensus       172 ~~F~~l~---~l~~~~~~~~LS---mGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~  220 (222)
                      +.+....   +.+++...+.++   +--|+|.--||.+||..|=+|+.+=|.-..
T Consensus       320 pq~tai~~~a~~~~~~~v~IIADGGi~~sGDi~KAla~GAd~VMlGs~lAg~~Es  374 (491)
T 1zfj_A          320 PQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLGSMFAGTDEA  374 (491)
T ss_dssp             CHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBSSC
T ss_pred             CCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCHHHHCHHHCCCCCC
T ss_conf             6164999999989864982883588475218999987078553333363156689


No 66 
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, structural genomics, NPPSFA; 1.60A {Pyrococcus horikoshii OT3} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=27.60  E-value=30  Score=14.76  Aligned_cols=148  Identities=14%  Similarity=0.143  Sum_probs=67.0

Q ss_pred             CCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCC-CCHH--CCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC
Q ss_conf             0012100011110000012587302302443200132011-1000--012222200134433333311430368897004
Q gi|254780801|r   53 FAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVS-LFDV--IETVSREKTASLLSLEMIKQSRFLPVYIQVNTG  129 (222)
Q Consensus        53 fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~-~~~~--Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~  129 (222)
                      ||-.-+.++.++. .++=..|.+.|=||+.=.+-++.+.. .+|+  ||........+..    .+.+   ..++-+.++
T Consensus        38 ~G~~~i~~l~~~~-~~~i~~D~K~~Dig~t~~~~~~~~~~~gad~~Tvh~~~g~~~i~~~----~~~~---~~~~~~~~s  109 (208)
T 2czd_A           38 SGVDIIRRLKEET-GVEIIADLKLADIPNTNRLIARKVFGAGADYVIVHTFVGRDSVMAV----KELG---EIIMVVEMS  109 (208)
T ss_dssp             HCTTHHHHHHHHH-CCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTTCHHHHHHH----HTTS---EEEEECCCC
T ss_pred             CCHHHHHHHHHCC-CCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH----HHHH---CCEEEECCC
T ss_conf             3989999998657-9829987520135750999999976169988997402787899877----5430---111464257


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHCC--CCEECCC---CCHHHHHHHHHC
Q ss_conf             66563465700012223443104311001110115433452058999999988758--9472247---773489999808
Q gi|254780801|r  130 YEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCIPPAMGNPKPHFYLLSEIARECK--LTKLSMG---MTRDFELAIASG  204 (222)
Q Consensus       130 ~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMti~p~~~d~~~~F~~l~~l~~~~~--~~~LSmG---MS~D~~~Ai~~G  204 (222)
                      ...+. .+.-+-...+++....   ....|+=+.+.   ++    ..+..+++.+.  ...+.=|   -.++-+.|++.|
T Consensus       110 ~~~~~-~~~~~~~~~~~~~a~~---~~~~g~~~~~~---~~----~~i~~ir~~~~~~~~i~~pGI~~~~~~~~~ai~~G  178 (208)
T 2czd_A          110 HPGAL-EFINPLTDRFIEVANE---IEPFGVIAPGT---RP----ERIGYIRDRLKEGIKILAPGIGAQGGKAKDAVKAG  178 (208)
T ss_dssp             SGGGG-TTTGGGHHHHHHHHHH---HCCSEEECCCS---ST----HHHHHHHHHSCTTCEEEECCCCSSTTHHHHHHHHT
T ss_pred             CCCHH-HHHHHHHHHHHHHHHH---HHCCCCCCCCC---CH----HHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHCC
T ss_conf             85144-3201489999999998---75178745506---64----67899998728887799689587899999999819


Q ss_pred             CCEEEECHHHCCCCC
Q ss_conf             988997113238999
Q gi|254780801|r  205 ATSVRIGSGIFGERP  219 (222)
Q Consensus       205 st~vRiGs~iFG~R~  219 (222)
                      |+.|=+||+|+++.+
T Consensus       179 ad~iVvGR~I~~a~d  193 (208)
T 2czd_A          179 ADYIIVGRAIYNAPN  193 (208)
T ss_dssp             CSEEEECHHHHTSSS
T ss_pred             CCEEEECHHHCCCCC
T ss_conf             999998955537989


No 67 
>3do6_A Formate--tetrahydrofolate ligase; TM1766, putative formyltetrahydrofolate synthetase, structural genomics; HET: MSE; 1.85A {Thermotoga maritima}
Probab=27.10  E-value=31  Score=14.70  Aligned_cols=158  Identities=17%  Similarity=0.128  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCC--CHHHHHH----HHHCCCCCCCCCC--------CHHHHHHHHCCCC
Q ss_conf             999999999999999819896441899871899--9999999----9972981000121--------0001111000001
Q gi|254780801|r    5 NKLQVFKQKIENSAILAKRPKDSVSLVAVSKMV--DSKKIRV----ALSCGQVIFAENK--------LQEAKKKWIPLRK   70 (222)
Q Consensus         5 ~nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~--~~e~I~~----~~~~G~~~fGENr--------vQE~~~K~~~l~~   70 (222)
                      .-+.++...|++. +++|    -+-+||+-++.  +.++|..    +-+.|++. ..+.        ..|+-++..+..+
T Consensus       344 ~G~~NL~~HIeNi-~~fG----~pvVVAIN~F~~DT~~Ei~~v~~~~~~~Gv~~-avs~~wa~GGeGa~eLA~~Vv~a~~  417 (543)
T 3do6_A          344 EGFKNLRVHVENL-RKFN----LPVVVALNRFSTDTEKEIAYVVKECEKLGVRV-AVSEVFKKGSEGGVELAKAVAEAAK  417 (543)
T ss_dssp             HHHHHHHHHHHHH-HHTT----CCEEEEEECCTTCCHHHHHHHHHHHHTTTCEE-EEECHHHHGGGGSHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHH-HHCC----CCEEECCCCCCCCCHHHHHHHHHHHHHCCCCE-EEECHHHCCCCCHHHHHHHHHHHCC
T ss_conf             8776699987528-8639----97365368998878889999999887629644-7742122367366999999987532


Q ss_pred             CCCCCEEEECCCC---CCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCC-CEEEEE---EEECCCCCCCCCCCCCHHH
Q ss_conf             2587302302443---20013201110000122222001344333333114-303688---9700466563465700012
Q gi|254780801|r   71 EWDVQLRFIGSLQ---SNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSR-FLPVYI---QVNTGYEIQKSGIMPNQTK  143 (222)
Q Consensus        71 ~~~i~wHfIG~LQ---sNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~-~~~vli---QVN~~~e~~K~G~~p~el~  143 (222)
                        +-..+|+=++.   ..||+.|++...--..|+=-..|++=-+..++.+- .+||++   |-.+|.+|+.-|. |.+..
T Consensus       418 --~~~~~~LY~~~~sl~eKIetIAk~IYGA~~V~~S~~A~~qL~~~e~~G~~~LPVCmAKTqySfSdDp~l~Ga-P~gf~  494 (543)
T 3do6_A          418 --DVEPAYLYEMNDPVEKKIEILAKEIYRAGRVEFSDTAKNALKFIKKHGFDELPVIVAKTPKSISHDPSLRGA-PEGYT  494 (543)
T ss_dssp             --CCCCCCSSCTTSCHHHHHHHHHHHTSCCSEEEECHHHHHHHHHHHHTTCTTSCEEEECCSSSSSSCTTCCSC-CCSCE
T ss_pred             --CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHCCC-CCCCE
T ss_conf             --566655788889999999999997028870668999999999999739998887888078775779242099-99976


Q ss_pred             HHHHHHHCCCC----CCHHH-HEECCCCCCCCH
Q ss_conf             22344310431----10011-101154334520
Q gi|254780801|r  144 DFVILCRQKYQ----LNVEG-LMCIPPAMGNPK  171 (222)
Q Consensus       144 ~l~~~i~~~~~----L~i~G-LMti~p~~~d~~  171 (222)
                      =-+..++-..+    +-+.| +||||.....|.
T Consensus       495 l~VrevrlsaGAGFiVai~G~ImtMPGLPk~Pa  527 (543)
T 3do6_A          495 FVVSDLFVSAGAGFVVALSGDINLMPGLPKKPN  527 (543)
T ss_dssp             EEECEEEEETTTTEEEEECSCCCSSCCCCSSCG
T ss_pred             EEEEEEEECCCCCEEEEEECCCCCCCCCCCCCC
T ss_conf             874289986888668887473020799999744


No 68 
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=26.98  E-value=31  Score=14.68  Aligned_cols=75  Identities=24%  Similarity=0.230  Sum_probs=47.7

Q ss_pred             CCCHHHHHHHHHHCCCCCCH--HHHEECCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCH----HHHHHHHHCCCEEEEC
Q ss_conf             70001222344310431100--11101154334520589999999887589472247773----4899998089889971
Q gi|254780801|r  138 MPNQTKDFVILCRQKYQLNV--EGLMCIPPAMGNPKPHFYLLSEIARECKLTKLSMGMTR----DFELAIASGATSVRIG  211 (222)
Q Consensus       138 ~p~el~~l~~~i~~~~~L~i--~GLMti~p~~~d~~~~F~~l~~l~~~~~~~~LSmGMS~----D~~~Ai~~Gst~vRiG  211 (222)
                      .|+++.+|++.- ...-|-+  --.  -|.+...|+-.|..++++.+.+..+--==|-||    |+.-||+.|-+-|-||
T Consensus       156 ~Peea~~Fv~~T-gvD~LAvaiGt~--HG~y~~~p~L~~~~l~~I~~~~~vPLVLHGgSG~p~e~i~~ai~~Gi~KiNi~  232 (286)
T 1gvf_A          156 DPQEAKRFVELT-GVDSLAVAIGTA--HGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVA  232 (286)
T ss_dssp             CHHHHHHHHHHH-CCSEEEECSSCC--SSCCSSCCCCCHHHHHHHHHHCCSCEEECCCTTCCHHHHHHHHHTTEEEEEEC
T ss_pred             CHHHHHHHHHHH-CCCEEHHHHCCC--CCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCEEEEEEC
T ss_conf             999999999987-888231552665--66658998543035667652469986745899997689999997692899957


Q ss_pred             HHHC
Q ss_conf             1323
Q gi|254780801|r  212 SGIF  215 (222)
Q Consensus       212 s~iF  215 (222)
                      |.+.
T Consensus       233 T~l~  236 (286)
T 1gvf_A          233 TELK  236 (286)
T ss_dssp             HHHH
T ss_pred             CHHH
T ss_conf             2899


No 69 
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=25.81  E-value=33  Score=14.55  Aligned_cols=49  Identities=27%  Similarity=0.382  Sum_probs=35.2

Q ss_pred             HHHHHHHHHHH---HHCCCCEECCC---CCHHHHHHHHHCCCEEEECHHHCCCCC
Q ss_conf             05899999998---87589472247---773489999808988997113238999
Q gi|254780801|r  171 KPHFYLLSEIA---RECKLTKLSMG---MTRDFELAIASGATSVRIGSGIFGERP  219 (222)
Q Consensus       171 ~~~F~~l~~l~---~~~~~~~LSmG---MS~D~~~Ai~~Gst~vRiGs~iFG~R~  219 (222)
                      .+.+....+.+   ++.+.+.++-|   -|+|.--|+.+||..|=+|+.+=|.-.
T Consensus       229 ~Pq~sav~~~a~~~~~~~v~iIADGGi~~~GDi~KAla~GAd~VMlGs~lAg~~E  283 (400)
T 3ffs_A          229 VPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEE  283 (400)
T ss_dssp             CCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEECGGGTTBTT
T ss_pred             CCHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCC
T ss_conf             4479999999999986599789537857687399998718735333115304523


No 70 
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=25.08  E-value=34  Score=14.46  Aligned_cols=97  Identities=14%  Similarity=0.259  Sum_probs=60.0

Q ss_pred             EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCC--CCCCHHHHEECCCCCCCCHHHHHHH-HHHHHHCCCCEECCCCC--
Q ss_conf             036889700466563465700012223443104--3110011101154334520589999-99988758947224777--
Q gi|254780801|r  120 LPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQK--YQLNVEGLMCIPPAMGNPKPHFYLL-SEIARECKLTKLSMGMT--  194 (222)
Q Consensus       120 ~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~--~~L~i~GLMti~p~~~d~~~~F~~l-~~l~~~~~~~~LSmGMS--  194 (222)
                      -++++.++.+ +....|+..++..+++..+.+.  .-+.+.+-...++........+..+ ..+++....+.+.-|+=  
T Consensus       210 ~~~~~~~~~~-d~~~~g~~~~~~~~~~~~l~~~g~d~~~~~~g~~~~~~~~~~~~~~~~~~~~ik~~~~~pvi~~G~i~~  288 (340)
T 3gr7_A          210 GPLFVRISAS-DYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITS  288 (340)
T ss_dssp             SCEEEEEESC-CCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCCC
T ss_pred             CCCCEEECCC-CCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
T ss_conf             8761020344-445898878999999999986475536432240126656778863137999999974986899727599


Q ss_pred             -HHHHHHHHHC-CCEEEECHHHCCC
Q ss_conf             -3489999808-9889971132389
Q gi|254780801|r  195 -RDFELAIASG-ATSVRIGSGIFGE  217 (222)
Q Consensus       195 -~D~~~Ai~~G-st~vRiGs~iFG~  217 (222)
                       .+-+.+|++| +.+|=+|+.+.-.
T Consensus       289 ~~~ae~~l~~g~aD~V~~gR~~iad  313 (340)
T 3gr7_A          289 GWQAEEILQNGRADLVFLGRELLRN  313 (340)
T ss_dssp             HHHHHHHHHTTSCSEEEECHHHHHC
T ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHC
T ss_conf             9999999987994135878999879


No 71 
>2ox1_A 3-dehydroquinate dehydratase; (beta-alpha)8 barrel, lyase; 2.33A {Archaeoglobus fulgidus}
Probab=24.80  E-value=23  Score=15.63  Aligned_cols=21  Identities=19%  Similarity=0.055  Sum_probs=8.3

Q ss_pred             CCCEEEECCCCCCHHHHHCCC
Q ss_conf             873023024432001320111
Q gi|254780801|r   73 DVQLRFIGSLQSNKVSEIVSL   93 (222)
Q Consensus        73 ~i~wHfIG~LQsNKvk~i~~~   93 (222)
                      |+++.++-..+.++++-|+.+
T Consensus        77 DiE~~~~~~~~~~~~~vI~S~   97 (196)
T 2ox1_A           77 DLESDLPDSAFDFNCRIIESY   97 (196)
T ss_dssp             EEETTSCGGGCCCSSEEEEEE
T ss_pred             EEHHHHHHHHHHCCCEEEEEE
T ss_conf             512445666643598899987


No 72 
>1qwl_A KATA catalase; beta barrel, azide complex, oxyferryl complex, oxidoreductase; HET: HEM; 1.60A {Helicobacter pylori} SCOP: e.5.1.1 PDB: 1qwm_A* 2a9e_A* 2iqf_A*
Probab=24.22  E-value=35  Score=14.35  Aligned_cols=60  Identities=12%  Similarity=0.027  Sum_probs=35.9

Q ss_pred             HHHHHHHHHHHHC-CCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEECCCC
Q ss_conf             0134433333311-4303688970046656346570001222344310431100111011543
Q gi|254780801|r  105 TASLLSLEMIKQS-RFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCIPPA  166 (222)
Q Consensus       105 ~a~~L~~~~~~~~-~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMti~p~  166 (222)
                      +.+.|-.+.++.. ..-.+.+|+-..++..+..+.+.+.-..+.+- ..|-+. .|-|++...
T Consensus       242 l~~DL~~~i~~G~~~~w~l~vQl~~~~da~~~~~d~~D~TkvWpe~-~~P~i~-VG~LtLnrn  302 (505)
T 1qwl_A          242 NQRDLFDAIARGDYPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYTQ-DYPLME-VGIVELNKN  302 (505)
T ss_dssp             HHHHHHHHHHTTCCCEEEEEEEEEEGGGTTTCSSCTTCTTCCCCTT-TSCCEE-EEEEEEEEC
T ss_pred             HHHHHHHHHHCCCCCEEEEEEEECCHHHHHHCCCCCCCCCCCCCCC-CCCCEE-EEEEEECCC
T ss_conf             7899999997489973689999506356752798988888408845-675078-679986678


No 73 
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein structure initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=24.00  E-value=13  Score=17.17  Aligned_cols=44  Identities=25%  Similarity=0.281  Sum_probs=26.0

Q ss_pred             HHCEEEEECCCCCHHHHHHHHHCCC---------CCCCCCCCHHHHHHHHCCC
Q ss_conf             4418998718999999999997298---------1000121000111100000
Q gi|254780801|r   26 DSVSLVAVSKMVDSKKIRVALSCGQ---------VIFAENKLQEAKKKWIPLR   69 (222)
Q Consensus        26 ~~v~LiaVtK~~~~e~I~~~~~~G~---------~~fGENrvQE~~~K~~~l~   69 (222)
                      +-=.++.|+|..+.++|+.||.-=-         ..=.|.+-+|..+.++.|.
T Consensus        29 DyY~iLGV~~~AS~~EIKkAYRkLA~k~HPDkn~~~~AeekFkeI~eAYevLs   81 (329)
T 3lz8_A           29 DYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLK   81 (329)
T ss_dssp             -----------------------------------------------------
T ss_pred             CCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf             77898099999799999999999999868898979469999999999997210


No 74 
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=23.98  E-value=35  Score=14.32  Aligned_cols=50  Identities=22%  Similarity=0.282  Sum_probs=38.0

Q ss_pred             HHHHHHHHHHH---HHCCCCEECCC---CCHHHHHHHHHCCCEEEECHHHCCCCCC
Q ss_conf             05899999998---87589472247---7734899998089889971132389999
Q gi|254780801|r  171 KPHFYLLSEIA---RECKLTKLSMG---MTRDFELAIASGATSVRIGSGIFGERPC  220 (222)
Q Consensus       171 ~~~F~~l~~l~---~~~~~~~LSmG---MS~D~~~Ai~~Gst~vRiGs~iFG~R~~  220 (222)
                      .+.|....+.+   +..+.+.++.|   -|+|.--|+.+||+.|=+|+.+=|.-..
T Consensus       341 ~pq~sai~~~a~~~~~~~v~iIADGGi~~~GDi~KAla~GAd~VMlGs~~Agt~Es  396 (514)
T 1jcn_A          341 RPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEA  396 (514)
T ss_dssp             CCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTSTTS
T ss_pred             CCHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHCCCCEEEECCHHCCCCCC
T ss_conf             85899999999999975992894688053467999987189889967033157668


No 75 
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=23.60  E-value=36  Score=14.27  Aligned_cols=81  Identities=17%  Similarity=0.122  Sum_probs=50.0

Q ss_pred             CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCC---HHHHHCCCCHH-CCCCCCCCHHHHHHHH
Q ss_conf             9999999999729810001210001111000001258730230244320---01320111000-0122222001344333
Q gi|254780801|r   37 VDSKKIRVALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSN---KVSEIVSLFDV-IETVSREKTASLLSLE  112 (222)
Q Consensus        37 ~~~e~I~~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsN---Kvk~i~~~~~~-Ihsvds~~~a~~L~~~  112 (222)
                      ...+++-.-+-+...++|.+|++-+.++..++..  +++++++=.--.+   +....+..+|+ |-+.|+.+....|+..
T Consensus        67 v~~snL~rqf~~~~~diGk~ka~~~~~~L~~lNp--~v~i~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~ln~~  144 (531)
T 1tt5_A           67 VSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNS--DVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADV  144 (531)
T ss_dssp             BCHHHHHHCTTCCGGGBTSBHHHHHHHHHHTTCT--TSBCCEESSCHHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHH
T ss_pred             CCHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHCC--CCCEEEECCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH
T ss_conf             8977749310578454688699999999998689--99479981783125454799983498999758999999999999


Q ss_pred             HHHHCCC
Q ss_conf             3331143
Q gi|254780801|r  113 MIKQSRF  119 (222)
Q Consensus       113 ~~~~~~~  119 (222)
                      +.+.+.+
T Consensus       145 c~~~~ip  151 (531)
T 1tt5_A          145 LWNSQIP  151 (531)
T ss_dssp             HHHTTCC
T ss_pred             HHHCCCC
T ss_conf             9981999


No 76 
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicusatcc 33223} PDB: 3krz_A*
Probab=23.19  E-value=36  Score=14.22  Aligned_cols=100  Identities=15%  Similarity=0.297  Sum_probs=56.8

Q ss_pred             HCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCC-CC--CCHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCEECCC
Q ss_conf             1143036889700466563465700012223443104-31--10011101154334520589999999887589472247
Q gi|254780801|r  116 QSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQK-YQ--LNVEGLMCIPPAMGNPKPHFYLLSEIARECKLTKLSMG  192 (222)
Q Consensus       116 ~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~-~~--L~i~GLMti~p~~~d~~~~F~~l~~l~~~~~~~~LSmG  192 (222)
                      .+....+.+.++.. +....|..+++..+++..+... ..  +...|.+..+. ...+.-.......+++....+.+.-|
T Consensus       207 vg~~~~i~~R~s~~-~~~~~g~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ik~~~~~pvi~~G  284 (343)
T 3kru_A          207 WPENKPIFVRVSAD-DYMEGGINIDMMVEYINMIKDKVDLIDVSSGGLLNVDI-NLYPGYQVKYAETIKKRCNIKTSAVG  284 (343)
T ss_dssp             SCTTSCEEEEEECC-CSSTTSCCHHHHHHHHHHHTTTCSEEEEECCCSSCCCC-CCCTTTTHHHHHHHHHHHTCEEEEES
T ss_pred             HCCCCCEEEECCCC-CCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCC-CCCCCCCHHHHHHHHHHCCCCEEEEC
T ss_conf             41577405632510-01468898799999999988634430220255545555-77753216799999997498889989


Q ss_pred             CCH---HHHHHHHHC-CCEEEECHHHCCC
Q ss_conf             773---489999808-9889971132389
Q gi|254780801|r  193 MTR---DFELAIASG-ATSVRIGSGIFGE  217 (222)
Q Consensus       193 MS~---D~~~Ai~~G-st~vRiGs~iFG~  217 (222)
                      .=.   +.+.+|++| +++|=+|+.+...
T Consensus       285 ~i~~~e~ae~~l~~g~~DlV~~gR~~iad  313 (343)
T 3kru_A          285 LITTQELAEEILSNERADLVALGRELLRN  313 (343)
T ss_dssp             SCCCHHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred             CCCCHHHHHHHHHCCCCEEHHHHHHHHHC
T ss_conf             94999999999987992126863999879


No 77 
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, dahps, DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=23.11  E-value=37  Score=14.21  Aligned_cols=71  Identities=14%  Similarity=0.091  Sum_probs=34.5

Q ss_pred             CCCCCHHHHHHHHHHCC--CC--CCHHHHEECCCCCCC--CHHHHHHHHHHHHH---CCCCEECCCCCHHH-----HHHH
Q ss_conf             65700012223443104--31--100111011543345--20589999999887---58947224777348-----9999
Q gi|254780801|r  136 GIMPNQTKDFVILCRQK--YQ--LNVEGLMCIPPAMGN--PKPHFYLLSEIARE---CKLTKLSMGMTRDF-----ELAI  201 (222)
Q Consensus       136 G~~p~el~~l~~~i~~~--~~--L~i~GLMti~p~~~d--~~~~F~~l~~l~~~---~~~~~LSmGMS~D~-----~~Ai  201 (222)
                      +.+|++....++.+.+.  .+  |--||.=|..+...-  .-..+..++++..-   ...++ |.|-. +|     ..|+
T Consensus       140 ~~s~~~~~~a~eki~~~Gn~~i~l~eRG~~t~~~~~~~~~D~~~i~~~k~~~~~pvi~D~sh-s~G~r-~~v~~la~aa~  217 (262)
T 1zco_A          140 GNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSH-PAGRR-SLVIPLAKAAY  217 (262)
T ss_dssp             TCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSST-TTCSG-GGHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCC-CCCCH-HHHHHHHHHHH
T ss_conf             77778999999999857997899997264453444324541255499986028972117987-66667-67999999999


Q ss_pred             HHCCCEE
Q ss_conf             8089889
Q gi|254780801|r  202 ASGATSV  208 (222)
Q Consensus       202 ~~Gst~v  208 (222)
                      ..|+.-+
T Consensus       218 a~G~dGl  224 (262)
T 1zco_A          218 AIGADGI  224 (262)
T ss_dssp             HTTCSEE
T ss_pred             HHCCCEE
T ss_conf             8299989


No 78 
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain, alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=22.52  E-value=38  Score=14.14  Aligned_cols=47  Identities=23%  Similarity=0.499  Sum_probs=32.4

Q ss_pred             HHHHHHHHHHHCCCCEECCC--CCH-HHHHHHHHCCCEEEECHHHCCCCCC
Q ss_conf             89999999887589472247--773-4899998089889971132389999
Q gi|254780801|r  173 HFYLLSEIARECKLTKLSMG--MTR-DFELAIASGATSVRIGSGIFGERPC  220 (222)
Q Consensus       173 ~F~~l~~l~~~~~~~~LSmG--MS~-D~~~Ai~~Gst~vRiGs~iFG~R~~  220 (222)
                      .....+.+++..+++.+.-|  .|. |+...+..||+.|=|||++|.. |+
T Consensus       229 ~l~~v~~i~~~~~ipIIg~GGI~s~~D~~~~l~~GAd~V~ig~~~~~~-P~  278 (311)
T 1ep3_A          229 ALKLIHQVAQDVDIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFAD-PF  278 (311)
T ss_dssp             HHHHHHHHHTTCSSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHHHC-TT
T ss_pred             HHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEECHHHHCC-CH
T ss_conf             789999986335677797689599999999998199999962888629-87


No 79 
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=21.94  E-value=38  Score=14.11  Aligned_cols=91  Identities=18%  Similarity=0.148  Sum_probs=53.4

Q ss_pred             HCEEEEECCCCCHHHHHHHHHCCC------------------------CCCCCCCCHHHHHHHHCCCCCCCCCEEEECCC
Q ss_conf             418998718999999999997298------------------------10001210001111000001258730230244
Q gi|254780801|r   27 SVSLVAVSKMVDSKKIRVALSCGQ------------------------VIFAENKLQEAKKKWIPLRKEWDVQLRFIGSL   82 (222)
Q Consensus        27 ~v~LiaVtK~~~~e~I~~~~~~G~------------------------~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~L   82 (222)
                      .|-++.+ ..-..+....+..+|+                        .++|.+|++-+.++...+....++.+|. +.+
T Consensus        38 ~VliiG~-gglG~ei~knL~l~Gv~~i~i~D~d~v~~~nl~r~~~~~~~dig~~k~~~~~~~l~~lnp~~~i~~~~-~~~  115 (346)
T 1y8q_A           38 RVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDT-EDI  115 (346)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEEC-SCG
T ss_pred             CEEEECC-CHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEEE-CCC
T ss_conf             7999876-88999999999995797899993999258574633216654519826799999999569996699982-566


Q ss_pred             CCCHHHHHCCCCH-HCCCCCCCCHHHHHHHHHHHHCCCE
Q ss_conf             3200132011100-0012222200134433333311430
Q gi|254780801|r   83 QSNKVSEIVSLFD-VIETVSREKTASLLSLEMIKQSRFL  120 (222)
Q Consensus        83 QsNKvk~i~~~~~-~Ihsvds~~~a~~L~~~~~~~~~~~  120 (222)
                      .. .....+..+| .|-+.|+......|++.+.+.+.+.
T Consensus       116 ~~-~~~~~~~~~d~vv~~~~~~~~~~~in~~~~~~~i~~  153 (346)
T 1y8q_A          116 EK-KPESFFTQFDAVCLTCCSRDVIVKVDQICHKNSIKF  153 (346)
T ss_dssp             GG-CCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTTCEE
T ss_pred             CC-CHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCE
T ss_conf             62-779998419599980799999999999999849958


No 80 
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp}
Probab=20.81  E-value=41  Score=13.91  Aligned_cols=95  Identities=15%  Similarity=0.073  Sum_probs=49.6

Q ss_pred             HHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf             34433333311430368897004665634657000122234431043110011101154334520589999999887589
Q gi|254780801|r  107 SLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCIPPAMGNPKPHFYLLSEIARECKL  186 (222)
Q Consensus       107 ~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMti~p~~~d~~~~F~~l~~l~~~~~~  186 (222)
                      ..+.+.+...  -+.++.+|.+          ++++..+.+.=..+-.+..+|+.+...   +....+..++ .......
T Consensus       119 ~~~~~~~~~~--g~~v~~~v~t----------~~~a~~a~~~Gad~Igv~~~~~~~~~~---~~~~~~~l~~-~~~~~~i  182 (232)
T 3igs_A          119 EALLARIHHH--HLLTMADCSS----------VDDGLACQRLGADIIGTTMSGYTTPDT---PEEPDLPLVK-ALHDAGC  182 (232)
T ss_dssp             HHHHHHHHHT--TCEEEEECCS----------HHHHHHHHHTTCSEEECTTTTSSSSSC---CSSCCHHHHH-HHHHTTC
T ss_pred             HHHHHHHHHC--CCEEEEECCC----------HHHHHHHHHCCCCEEEEECCCCCCCCC---CCHHHHHHHH-HHHCCCC
T ss_conf             9999999754--9869998699----------999999996899889973577877876---7036788999-9733782


Q ss_pred             CE-ECCCCC--HHHHHHHHHCCCEEEECHHHCCC
Q ss_conf             47-224777--34899998089889971132389
Q gi|254780801|r  187 TK-LSMGMT--RDFELAIASGATSVRIGSGIFGE  217 (222)
Q Consensus       187 ~~-LSmGMS--~D~~~Ai~~Gst~vRiGs~iFG~  217 (222)
                      +. ..-|.+  .|...|++.|+.-|=|||+|..+
T Consensus       183 pvia~GGI~t~~d~~~~~~~GAd~V~vGsAi~~~  216 (232)
T 3igs_A          183 RVIAEGRYNSPALAAEAIRYGAWAVTVGSAITRL  216 (232)
T ss_dssp             CEEEESCCCSHHHHHHHHHTTCSEEEECHHHHCH
T ss_pred             EEEEECCCCCHHHHHHHHHCCCCEEEECHHHCCH
T ss_conf             3998589899999999998699999989477590


No 81 
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, loop-6, purine biosynthesis; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=20.67  E-value=41  Score=13.89  Aligned_cols=50  Identities=26%  Similarity=0.408  Sum_probs=35.3

Q ss_pred             HHHHHHHHHHHH---HCCCCEECCC---CCHHHHHHHHHCCCEEEECHHHCCCCCC
Q ss_conf             058999999988---7589472247---7734899998089889971132389999
Q gi|254780801|r  171 KPHFYLLSEIAR---ECKLTKLSMG---MTRDFELAIASGATSVRIGSGIFGERPC  220 (222)
Q Consensus       171 ~~~F~~l~~l~~---~~~~~~LSmG---MS~D~~~Ai~~Gst~vRiGs~iFG~R~~  220 (222)
                      .+.+....+.++   ....+.++.|   -|+|.--|+.+||..|=+|+.+=|.-..
T Consensus       239 ~pq~sAv~~~~~~~~~~~vpIIADGGi~~~GDi~KAla~GAdaVMlG~~lAg~~Ea  294 (404)
T 1eep_A          239 VPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKES  294 (404)
T ss_dssp             CCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTS
T ss_pred             CCHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHCCCCHHHHCHHHCCCCCC
T ss_conf             11489999999986246876673688687508999997075265534143337679


No 82 
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=20.11  E-value=42  Score=13.81  Aligned_cols=71  Identities=10%  Similarity=0.012  Sum_probs=38.2

Q ss_pred             CCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCCCCH-HCCCCCC-CCHHHHHHHHHHHHCCCE
Q ss_conf             98100012100011110000012587302302443200132011100-0012222-200134433333311430
Q gi|254780801|r   49 GQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVSLFD-VIETVSR-EKTASLLSLEMIKQSRFL  120 (222)
Q Consensus        49 G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~~~~-~Ihsvds-~~~a~~L~~~~~~~~~~~  120 (222)
                      +..++|++++.-+.++...+....+++.| -..+..--.......+| +|...|. ......+++.+.+.+++.
T Consensus       165 ~~~diG~~K~~~a~~~l~~~np~v~I~~~-~~~i~~~~~~~~~~~~D~vi~~~d~~~~~r~~in~~c~~~~iP~  237 (353)
T 3h5n_A          165 SEDDVGKNKTEVIKRELLKRNSEISVSEI-ALNINDYTDLHKVPEADIWVVSADHPFNLINWVNKYCVRANQPY  237 (353)
T ss_dssp             CGGGTTSBHHHHHHHHHHHHCTTSEEEEE-ECCCCSGGGGGGSCCCSEEEECCCCSTTHHHHHHHHHHHTTCCE
T ss_pred             CHHHHCCCHHHHHHHHHHHHCCCCCEEEE-HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCE
T ss_conf             96683971999999999975898724531-11036332565533333431135507777777999986069988


Done!