HHSEARCH alignment of GI: 254780801 and SCOP domain: d1vfsa2

Alignment
>d1vfsa2 c.1.6.1 (A:13-249) Alanine racemase {Streptomyces lavendulae [TaxId: 1914]}
Probab=99.58  E-value=1e-14  Score=117.22  Aligned_cols=205  Identities=15%  Similarity=0.129  Sum_probs=141.7

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHCEEEEECCC----CCHHHH-HHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECC
Q ss_conf             999999999999981989644189987189----999999-999972981000121000111100000125873023024
Q gi|254780801|r    7 LQVFKQKIENSAILAKRPKDSVSLVAVSKM----VDSKKI-RVALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGS   81 (222)
Q Consensus         7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~----~~~e~I-~~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~   81 (222)
                      |+.++.+++...+++   + ..+++||.|.    +....| +.+.++|++.||-..++|+.+-...-.+.   ..-..|.
T Consensus         2 L~al~~N~~~l~~~~---~-~~~i~aVVKAnAYGhG~~~ia~~l~~~g~~~f~Va~~~EA~~lR~~g~~~---~Il~l~~   74 (237)
T d1vfsa2           2 LDAVRANVRALRARA---P-RSALMAVVKSNAYGHGAVPCARAAQEAGAAWLGTATPEEALELRAAGIQG---RIMCWLW   74 (237)
T ss_dssp             HHHHHHHHHHHHTTS---T-TSEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEESSHHHHHHHHHTTCCS---EEEECCC
T ss_pred             HHHHHHHHHHHHHHC---C-CCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCC---CEEECCC
T ss_conf             799999999999768---9-98299998131574779999999998699989874003488998704689---7200258


Q ss_pred             CCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHH---HHCCCCCCHH
Q ss_conf             4320013201110000122222001344333333114303688970046656346570001222344---3104311001
Q gi|254780801|r   82 LQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVIL---CRQKYQLNVE  158 (222)
Q Consensus        82 LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~---i~~~~~L~i~  158 (222)
                      +-..-+..++. .++..+|++...++.+...+.+.+++.+|.|+||+|  .+|.||.|+|+.++++.   +...++|++.
T Consensus        75 ~~~~~~~~~~~-~~i~~~i~s~~~l~~l~~~a~~~~~~~~vhLkiDTG--M~RlG~~~~e~~~l~~~~~~~~~~~~l~~~  151 (237)
T d1vfsa2          75 TPGGPWREAIE-TDIDVSVSGMWALDEVRAAARAAGRTARIQLKADTG--LGRNGCQPADWAELVGAAVAAQAEGTVQVT  151 (237)
T ss_dssp             CTTCCHHHHHH-TTCEEEECSHHHHHHHHHHHHHHTSCEEEEEEBCSS--CCSSSBCHHHHHHHHHHHHHHHHTTSEEEE
T ss_pred             CCHHHHHHHHH-HCCCCEECCHHHHHHHHHHHHHCCCCEEEEEEECCC--CCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             87278999997-234524341988999999999659972699985588--777788835789999998865306863265


Q ss_pred             HHEECCCCCCCCH-----HHHHHHHHH---HHHC--CCCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCCC
Q ss_conf             1101154334520-----589999999---8875--8947224777348999980898899711323899999
Q gi|254780801|r  159 GLMCIPPAMGNPK-----PHFYLLSEI---AREC--KLTKLSMGMTRDFELAIASGATSVRIGSGIFGERPCQ  221 (222)
Q Consensus       159 GLMti~p~~~d~~-----~~F~~l~~l---~~~~--~~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~~  221 (222)
                      |+||==+..+++.     .++..+.++   ..+.  .....|++.|.-.-..=+.--+|||+|-+|||--|.+
T Consensus       152 Gi~TH~a~ad~~~~~~~~~Q~~~F~~~~~~l~~~~~~~~~~h~aNS~~~~~~~~~~~d~vR~Gi~lYG~~P~~  224 (237)
T d1vfsa2         152 GVWSHFACADEPGHPSIRLQLDAFRDMLAYAEKEGVDPEVRHIANSPATLTLPETHFDLVRTGLAVYGVSPSP  224 (237)
T ss_dssp             EEECCCSSTTSTTCHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECHHHHHHCGGGCSSEEEECGGGGTCCSCG
T ss_pred             EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHCCCCCCCCEECCCHHHCCCCCCC
T ss_conf             5651202453112266899999999999999971899985895188999849976798767085005889787


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLP-binding barrel
family: Alanine racemase-like, N-terminal domain
domain: Alanine racemase
species: Streptomyces lavendulae [TaxId: 1914]