HHsearch alignment for GI: 254780802 and conserved domain: COG0495
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=1509.76 Aligned_cols=801 Identities=46% Similarity=0.838 Sum_probs=742.8
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCCCC-CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 765689998999999998598036767888-8389980778978987400477977899999977718985567688140
Q gi|254780802|r 4 RSYSPQETDSIWQSAWYDSNIFKAENGKNK-KKYFVLEMFPYPSGNIHMGHLRNYVIGDVVARFMRASGYSVLHPMGWDA 82 (869)
Q Consensus 4 ~~y~~~~iE~kwq~~W~~~~~fe~~~~~~~-~kf~i~~~pPy~nG~lHiGH~~~~t~~Dv~aRy~rm~G~~Vl~~~G~d~ 82 (869)
T Consensus 3 ~~y~~~~IE~KWQ~~W~e~~~Fe~~~d~~~~~Kfyvl~mfPYpSG~LHvGH~r~Yti~Dv~aRykRm~GyNVL~PMGwda 82 (814)
T COG0495 3 SRYNPREIEEKWQKRWEEAKVFEADEDSDKPEKFYVLVMFPYPSGALHVGHVRNYTIGDVIARYKRMQGYNVLHPMGWDA 82 (814)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCC
T ss_conf 65235789999999998659710689888777559986787888873468541210899999999856972145675566
Q ss_pred CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCEECCCHHHHHHHHHHHHHHHHCCCEEECCEEEECCCC
Q ss_conf 20589999998099999999999999999999819176646982147735999999999999988963412213321477
Q gi|254780802|r 83 FGMPAENAAREHNVHPKMWTYQNIKVMRKQLQSIGLSIDWSKDFATCDVDYYHCQQLLFLDFMKHNVIVRKTAQVNWDPV 162 (869)
Q Consensus 83 ~GlPie~~~~e~~~~~~~~~~~~i~~~k~~~~~lG~~~DW~r~y~T~d~~y~~~v~w~f~~L~~kGliyrg~~pV~wcp~ 162 (869)
T Consensus 83 fGlPae~~A~~~~~~P~~wt~~ni~~~k~qlk~lG~siDW~Ref~T~Dp~Yyk~~QW~F~kL~ekGL~y~~~~~VnwcP~ 162 (814)
T COG0495 83 FGLPAENAAIKIGTDPAKWTYYNIAYMKKQLKSLGFSIDWRREFATCDPEYYKWIQWQFLKLYEKGLAYRKEAPVNWCPV 162 (814)
T ss_pred CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCEECCC
T ss_conf 68639999998578969999999999999999808761235545647964779999999999977988852554310777
Q ss_pred CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6767789898438533456432233475233430344454432100225-543222221000145576754535556777
Q gi|254780802|r 163 EQTVLANEQVINGRGWRSDAPVEQRSLPQWFFKISDLSQELLDSIETLS-EWPEKVKIMQKNWIGRSEGMEIRWEIVSNT 241 (869)
Q Consensus 163 ~~t~la~~Ev~~g~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~l~-~~p~~v~~~~~~~i~~~~~~~~~~~~~~~~ 241 (869)
T Consensus 163 d~tvlaneqv~~g~~~r~~~~V~~kel~qw~~kit~yae~ll~~l~~l~~~wPE~Vk~mq~nWIg~s~g~~v~f~~~~~~ 242 (814)
T COG0495 163 DGTVLANEQVIDGGCWRCGEPVEIKELTQWFFKITDYADELLDDLDKLATLWPETVKGMQRNWIGPSEGYEVAFVVDGEE 242 (814)
T ss_pred CCCCCCCCEEECCCCCCCCCCEEEEEEEEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCC
T ss_conf 69761541241587655788526866689999913429999866665424795669989872707888758998517764
Q ss_pred CCCCCEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCC
Q ss_conf 777513653200134443232003302443203454131--458999886531111245554302553237861037777
Q gi|254780802|r 242 IDQIEEILVYTTRPETIFGASFIAIAVDHSISEKLSCDN--TDIKEFCDEEKQKGTSLSVLDKTEKKGIYTGIHVKHPLN 319 (869)
Q Consensus 242 ~~~~~~l~~~TtrPeTl~g~~~i~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~P~~ 319 (869)
T Consensus 243 ~--~~~~~vfttr~dt~~gvt~~~~a~~h~lv~~~~~~~~~~~~a~fv~~~~~~~~~~~~~~~~~k~gv~~g~~a~~p~~ 320 (814)
T COG0495 243 E--IVSIEVFTTRPDTLFGVTYVVLAPEHPLVGKLVTNPQTPLVAEFVDECKGTGVVESVPAHAEKDGVFLGGYAINPVN 320 (814)
T ss_pred C--CCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCEECCCCCCCCCC
T ss_conf 4--10024466357311674899970786678987418651669999988617871563045687763113650247777
Q ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCH
Q ss_conf 74157763112345453332221113467211012210354432101677655542221121012334458300013564
Q gi|254780802|r 320 PNVVIPVYIANFVFMNYGTGAIFGCPFADQRDMDFAKKYGLPIIPIMKRSINHSQDIEEGKAFSGDGIMINSSFLDGMTN 399 (869)
Q Consensus 320 ~~~~ipv~~~~~V~~~~GTG~V~~~P~h~~~D~~~~~k~glpi~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 399 (869)
T Consensus 321 ~-e~iPi~~a~~vl~~ygtgavm~vpahd~rd~efA~~y~l~i~~vi~~~~~-----~~~~~~~~~g~linS~~~~gl~~ 394 (814)
T COG0495 321 G-EKIPVWIANYVLMEYGTGAVMGVPAHDERDLEFATKYKLPIKKVIMPEGT-----VGKKVYEGEGVLINSGGLDGLDY 394 (814)
T ss_pred C-CCCCEEEECCCCCCCCCCCEECCCCCCCHHHHHHHHCCCCEEEEEECCCC-----CCCEEECCCCEEECCCCCCCCCC
T ss_conf 8-86778996743145556635458888702068998528861799824887-----66400114745762543367640
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHCCCCCCCCCCCC
Q ss_conf 66548889999740467752022211100011122112322222342233346846347420001110010002245421
Q gi|254780802|r 400 TEALQAVMSHLEKQNIKNSPIGKRKINFRLRDWCISRQRSWGCPIPVIHCQKCGIVELPKEDLPVQLPEDLDFTLPGNPL 479 (869)
Q Consensus 400 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~l~DW~ISRqr~WG~piPv~~~~~~~~~~~~~~~l~v~~~~d~~~~~~~~~l 479 (869)
T Consensus 395 e~a~~~~~~~l~~~~-----~~q~~v~Y~lrdW~~srqRywg~pipii~~e~~~~~~~~~d~Lpv~lp~~~~~~gt~~pL 469 (814)
T COG0495 395 EEAKVKIRCGLVKRG-----LGQWFVNYRLRDWLKSRQRYWGEPIPIIHCEDCGVVPVPEDWLPVKLPERVRGLGTGSPL 469 (814)
T ss_pred HHHHHHHHHHHHHHC-----CCCEEEECCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
T ss_conf 567999998688723-----782588514515778999970899645474237855473676674366411467988999
Q ss_pred CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHH
Q ss_conf 00245642110136764435643234566643332233555654--4101356641143344014555443320234555
Q gi|254780802|r 480 ENHPTWKKIFCVKCGSEALRETDTMDTFVDSSWYYMRYMTPHAK--DPINKELVRQWFPVDQYIGGIEHAVLHLLYARFF 557 (869)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~r~~dvld~w~dS~~~~~~~~~~~~~--~~~~~e~~~~~~P~D~~i~g~d~~~~~~~~~r~~ 557 (869)
T Consensus 470 ~~~~~W~~~s~~~--s~~~ret~Tm~~~~~sswy~~r~~d~~~~~~~~~~~e~~~yW~PVD~yigG~ehavlHLly~rF~ 547 (814)
T COG0495 470 PWDEEWVIESLPD--STAYRETDTMDTFIDSSWYYLRFFDPIFLGELPFDREEFNYWYPVDLYIGGIEHAVLHLLYFRFF 547 (814)
T ss_pred CCCCCEEEEECCC--CCEEEEHHHHHHHCCCCCCCHHHCCHHCCCCCHHCHHHHHCCCCHHEEECCHHHHHHHHHHHHHH
T ss_conf 8883617996699--85353232465760432101866581007543225788742067201226366777889999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHCCCCCCCCCCCEECCCCEEEECCCCCCHHHCCC
Q ss_conf 32013478732232002222355323224332358700130620221025677754411048970640474210000001
Q gi|254780802|r 558 AHILKKIGYIEIDEPFKRLFTQGMVVHETYYQLEGIKKKYLKPDEVILRNIEGENCAFRLSDNSKVVIGPLEKMSKSKKN 637 (869)
Q Consensus 558 ~~~l~~~g~~~~~~pf~~l~~~G~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~KMSKSkGN 637 (869)
T Consensus 548 hkal~d~g~~p~~epf~~L~~qGmVl~~-----------------------------------------~g~KMSKSKgN 586 (814)
T COG0495 548 HKALFDEGLVPKDEPFKKLITQGMVLGE-----------------------------------------EGEKMSKSKGN 586 (814)
T ss_pred HHHHCCCCCCCCCCHHHHHHCCCEEEEC-----------------------------------------CCCCCCCCCCC
T ss_conf 9883475778776504444114268742-----------------------------------------77704544578
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC----HHHHHHHHHHHHH
Q ss_conf 222210012346335666553013321111134321011455677889999976302466789----7569999999999
Q gi|254780802|r 638 VIDPMKVIKSYGADTARLFVLSDSPPDRDIIWSNKGVDSTYQFIQQIWRLIYNAKDELQTSST----KKDISLISKSTKF 713 (869)
Q Consensus 638 vi~p~~~i~~yGaD~lRl~~~~~~~~~~d~~~s~~~i~~~~rfl~kl~~l~~~~~~~~~~~~~----~~D~~ils~~~~~ 713 (869)
T Consensus 587 ~v~p~~~i~~yGADt~Rl~~m~~ap~~~d~~W~e~gv~g~~rfL~r~~~l~~~~~~~~~~~~~~~~~~~~~~~---~h~~ 663 (814)
T COG0495 587 VVDPEEAVEKYGADTVRLYIMFAAPPEQDLEWSESGVEGARRFLQRVWNLVKEHLEKLVEELTKEQGKEDRWL---LHRT 663 (814)
T ss_pred CCCHHHHHHHHCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH---HHHH
T ss_conf 8898999999584098999986087753788774564899999999999999864023333553056889999---9999
Q ss_pred HHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCE
Q ss_conf 9999999881-688999999999999999999862110002217999999999999997223438999999982899835
Q gi|254780802|r 714 LERIEENYQN-LSFNKAVANIHELVNVISKPLMEIAKKKSNADRISTIRYILEKLIIMMSPMIPHLAEECWQLLGNAGLV 792 (869)
Q Consensus 714 i~~v~~~~e~-~~f~~ai~~i~~f~n~ls~~y~~~~k~~~~~~~~~~l~~vl~~l~~lLaPi~PhiaEEiw~~Lg~~~~i 792 (869)
T Consensus 664 ~~~v~~~~e~~~~~nt~i~~~m~l~N~l~~~~~~~~~------~~~~l~~~l~~~v~lLaP~aPH~aEElW~~lg~~~~v 737 (814)
T COG0495 664 IKKVTEDFEARQTFNTAIAALMELLNALRKYLRRTEG------DRKVLREALETWVRLLAPFAPHIAEELWEELGNEGFV 737 (814)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCE
T ss_conf 9999999999988999999999999999998750232------0789999999999996666647799999996699816
Q ss_pred EECCCCCCCHHHHHCCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCEEEEEC
Q ss_conf 51788665967860377149899738166799808888999999999747888998469982599981890575779
Q gi|254780802|r 793 AQQKWPKLDPILEVNTDIILPIQVNGKKRACITVSMNTDDDFIKKTVLELNVIKNILQGKSPKKIIIISKRIVNIVV 869 (869)
Q Consensus 793 ~~~~WP~~d~~~~~~~~~~~~iqingk~r~~i~v~~~~~~~~i~~~~~~~~~i~~~l~~k~~~k~I~v~~klin~vi 869 (869)
T Consensus 738 ~~~~wP~~de~~l~~~~~~~~vqvngk~r~~~~~~~~a~~~~~~~~~~~~~~v~~~l~~~~~~k~i~VP~k~vn~v~ 814 (814)
T COG0495 738 SNAPWPEPDEEALVEDEVEIVVQVNGKVRAREVVAADADEEKVKEIALADEEVQKFLQGKTIKKVIAVPGKPVNIVE 814 (814)
T ss_pred EECCCCCCCHHHCCCCEEEEEEEECCEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCCCEEEEC
T ss_conf 41789987734416550599999802897899974779878999998623889998767885148964996148869