HHsearch alignment for GI: 254780802 and conserved domain: PRK06039
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=1312.66 Aligned_cols=693 Identities=24% Similarity=0.404 Sum_probs=546.1
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCC--CCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 8765689998999999998598036--76788883899807789789874004779778999999777189855676881
Q gi|254780802|r 3 TRSYSPQETDSIWQSAWYDSNIFKA--ENGKNKKKYFVLEMFPYPSGNIHMGHLRNYVIGDVVARFMRASGYSVLHPMGW 80 (869)
Q Consensus 3 ~~~y~~~~iE~kwq~~W~~~~~fe~--~~~~~~~kf~i~~~pPy~nG~lHiGH~~~~t~~Dv~aRy~rm~G~~Vl~~~G~ 80 (869)
T Consensus 2 ~~~~~~~~iE~~~~~~W~~~~~f~~~~~~~~~~~~f~~~dgPPy~nG~lHiGH~~~~tikDii~Ry~rm~G~~V~~~~Gw 81 (1042)
T PRK06039 2 PSKPDFPAVEEEVLKFWKENDIFEKSIENREGGPEFVFYDGPPFANGLPHYGHLLTRTIKDVVPRYKTMKGYKVERRAGW 81 (1042)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 89999889889999999868992463000699997899678998788721436687899999999987389966898974
Q ss_pred CCCCHHHHHHHHHH-----------------CCCHHHHHHHHHHHHHHHHHHCCCEEECCCCEECCCHHHHHHHHHHHHH
Q ss_conf 40205899999980-----------------9999999999999999999981917664698214773599999999999
Q gi|254780802|r 81 DAFGMPAENAAREH-----------------NVHPKMWTYQNIKVMRKQLQSIGLSIDWSKDFATCDVDYYHCQQLLFLD 143 (869)
Q Consensus 81 d~~GlPie~~~~e~-----------------~~~~~~~~~~~i~~~k~~~~~lG~~~DW~r~y~T~d~~y~~~v~w~f~~ 143 (869)
T Consensus 82 D~hGLPiE~~vek~lgi~~k~~i~~~gi~~F~~~cr~~~~~~~~~~~~~~~rlG~~~Dw~~~y~T~d~~y~e~v~~~F~~ 161 (1042)
T PRK06039 82 DTHGLPVELEVEKELGISGKKDIEKYGIEKFNEECRESVLRYTDEWEEYTERLGRWVDFDNPYKTMDNSYMESVWWALKQ 161 (1042)
T ss_pred CCCCHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHH
T ss_conf 86778999999998476676426552899999999999999999999999981820526898276898899999999999
Q ss_pred HHHCCCEEECCEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 99889634122133214776767789898438533456432233475233430344454432100225543222221000
Q gi|254780802|r 144 FMKHNVIVRKTAQVNWDPVEQTVLANEQVINGRGWRSDAPVEQRSLPQWFFKISDLSQELLDSIETLSEWPEKVKIMQKN 223 (869)
Q Consensus 144 L~~kGliyrg~~pV~wcp~~~t~la~~Ev~~g~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~l~~~p~~v~~~~~~ 223 (869)
T Consensus 162 L~ekGliYrg~~~V~wcp~~~T~Lad~Ev~~~Y~~~--------~~~s-------------------------------- 201 (1042)
T PRK06039 162 LYDKGLLYEGYRVVPYCPRCETPLSNHEVRQGYKEV--------KDPS-------------------------------- 201 (1042)
T ss_pred HHHCCCEEECCCEECCCCCCCCCCHHHHHHCCCEEE--------ECCE--------------------------------
T ss_conf 998799896271325489889881186730574441--------4464--------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHCCHH---H-HHHHHHHHH-HHHHHH
Q ss_conf 14557675453555677777751365320013444323200330244320345413145---8-999886531-111245
Q gi|254780802|r 224 WIGRSEGMEIRWEIVSNTIDQIEEILVYTTRPETIFGASFIAIAVDHSISEKLSCDNTD---I-KEFCDEEKQ-KGTSLS 298 (869)
Q Consensus 224 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~TtrPeTl~g~~~i~v~~~~~~~~~~~~~~~~---~-~~~~~~~~~-~~~~~~ 298 (869)
T Consensus 202 -------~~vkF~l~~---~~~~~l~iwTTrPwTl~~n~avaV~Pd~~Y~~v~~~~~~e~~i~a~~~~~~~~~~~~~~~~ 271 (1042)
T PRK06039 202 -------VYVKFKLKG---EENEYLLAWTTTPWTLPSNLALAVGPDIDYVKVRDKGGGEVYILAEALLEKVLKKEGGEEY 271 (1042)
T ss_pred -------EEEEEEEEC---CCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEEHHHHHHHHHHCCCCCE
T ss_conf -------999999752---7984799865887511113599986876369998448975999808889999855167540
Q ss_pred HHHHHCCCCCCCCCEECCCCC------CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
Q ss_conf 554302553237861037777------74157763112345453332221113467211012210354432101677655
Q gi|254780802|r 299 VLDKTEKKGIYTGIHVKHPLN------PNVVIPVYIANFVFMNYGTGAIFGCPFADQRDMDFAKKYGLPIIPIMKRSINH 372 (869)
Q Consensus 299 ~~~~~~~~~~~~G~~~~~P~~------~~~~ipv~~~~~V~~~~GTG~V~~~P~h~~~D~~~~~k~glpi~~v~~~~~~~ 372 (869)
T Consensus 272 ~v~~~~~G~~L~G~~y~~p~~~~~~~~~~~~~~Vi~~d~V~~~~GTG~Vh~aPahg~~D~~~~~~~~l~~~~~vd~~G~~ 351 (1042)
T PRK06039 272 EVLETFKGEELEGLRYEPPFPYFVPEDEENAFRVVAADFVTTEDGTGIVHIAPAFGEDDFEVGKKYGLPVVCPVDDNGRF 351 (1042)
T ss_pred EEEEEEECHHHCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 78877512430788877886432366778742799547205788974289678898899999998399866631775533
Q ss_pred CCCCCC-------------------HHHCCCCCCCCCCHHHCCCC---------------HHHHHHHHHHHHHHHCCCCC
Q ss_conf 542221-------------------12101233445830001356---------------46654888999974046775
Q gi|254780802|r 373 SQDIEE-------------------GKAFSGDGIMINSSFLDGMT---------------NTEALQAVMSHLEKQNIKNS 418 (869)
Q Consensus 373 ~~~~~~-------------------~~~~~~~~~~~~~~~~~g~~---------------~~~~~~~i~~~l~~~~~~~~ 418 (869)
T Consensus 352 ~~~~~~~~G~~v~da~~~Ii~~L~~~g~l~~~~~~~Hsyp~cwR~~~pli~~~~~QWFi~~~~~k~~~l~~~~~i~w~P~ 431 (1042)
T PRK06039 352 TEEVPDYAGKFVKDADKEIIRDLKERGLLFKAETYEHSYPHCWRCDTPLIYRAVESWFIRVTKIKDRMLELNQKINWYPE 431 (1042)
T ss_pred CCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEECC
T ss_conf 46443517936530209999999866752246633557874257798148633262776557679999998602147345
Q ss_pred CHHHHHHHH---HCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC--CCCCHHHHCCCCCCCCCCCCCHHHHH---HHHHH
Q ss_conf 202221110---00111221123222223422333468463474--20001110010002245421002456---42110
Q gi|254780802|r 419 PIGKRKINF---RLRDWCISRQRSWGCPIPVIHCQKCGIVELPK--EDLPVQLPEDLDFTLPGNPLENHPTW---KKIFC 490 (869)
Q Consensus 419 ~~~~~~~~~---~l~DW~ISRqr~WG~piPv~~~~~~~~~~~~~--~~l~v~~~~d~~~~~~~~~l~~~~~~---~~~~~ 490 (869)
T Consensus 432 ~~~~~rf~~wl~n~~DW~ISRQR~WG~PIPvw~~~~~~~~~v~~s~~el~~~~~-------~~~~~dlhrp~iD~v~~~~ 504 (1042)
T PRK06039 432 HIKDGRFGKWLENARDWAISRNRYWGTPLPIWRCEDCGRIDVIGSIEELEEDFG-------VPKPIDLHRPYIDEVTLPC 504 (1042)
T ss_pred CCCCCHHHHHHHHCCCHHHHCCCCCCCCCEEEEECCCCCEEECCCHHHHHHHCC-------CCCCCHHCCCCCCCEEECC
T ss_conf 232006999986363311000234577540699679996670286999987608-------8883010245455056558
Q ss_pred CCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 136764435643234566643-3322335556544101356641143344014555443320234555320134787322
Q gi|254780802|r 491 VKCGSEALRETDTMDTFVDSS-WYYMRYMTPHAKDPINKELVRQWFPVDQYIGGIEHAVLHLLYARFFAHILKKIGYIEI 569 (869)
Q Consensus 491 ~~~~~~~~r~~dvld~w~dS~-~~~~~~~~~~~~~~~~~e~~~~~~P~D~~i~g~d~~~~~~~~~r~~~~~l~~~g~~~~ 569 (869)
T Consensus 505 ~~~~~~~~r~~DvlD~WfdSg~~p~a~~~~p~~----~~~~f~~~~PaD~i~eg~Dq~-------RgWF~sl~~~s~~~~ 573 (1042)
T PRK06039 505 PDCGTGMRRVPDVLDVWFDSGSMPYAQLHYPFE----NKELFEEHFPADFIVEGIDQT-------RGWFYTLLALSTALF 573 (1042)
T ss_pred CCCCCCCCCCCCCEEEEEECCCCCEEEECCCCC----CHHHHHCCCCCEEEEECCCHH-------EEEEEEEEEEEEEEC
T ss_conf 998621030564212376358744069778643----666662158644445232221-------014360003212234
Q ss_pred -CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHCCCCCCCCCCCEECCCCEEEECCCCCCHHHCCCCCCCCCCCCCC
Q ss_conf -3200222235532322433235870013062022102567775441104897064047421000000122221001234
Q gi|254780802|r 570 -DEPFKRLFTQGMVVHETYYQLEGIKKKYLKPDEVILRNIEGENCAFRLSDNSKVVIGPLEKMSKSKKNVIDPMKVIKSY 648 (869)
Q Consensus 570 -~~pf~~l~~~G~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~KMSKSkGNvi~p~~~i~~y 648 (869)
T Consensus 574 ~~~Pfk~v~~~G~Vld~-----------------------------------------~G~KMSKS~GNvidP~~vi~~y 612 (1042)
T PRK06039 574 DRPPYKNVIVHGHVLDE-----------------------------------------DGQKMSKSLGNYVDPFEVFDKY 612 (1042)
T ss_pred CCCCCCEEEEEEEEECC-----------------------------------------CCEECCCCCCCCCCHHHHHHHC
T ss_conf 84200258995038736-----------------------------------------8648033678868979998860
Q ss_pred CHHHHHHHHHHCCCCCCCCCCCCCCHH-HHHHHHHHHHHHHHH-----HHCCCCCC--------CCHHHHHHHHHHHHHH
Q ss_conf 633566655301332111113432101-145567788999997-----63024667--------8975699999999999
Q gi|254780802|r 649 GADTARLFVLSDSPPDRDIIWSNKGVD-STYQFIQQIWRLIYN-----AKDELQTS--------STKKDISLISKSTKFL 714 (869)
Q Consensus 649 GaD~lRl~~~~~~~~~~d~~~s~~~i~-~~~rfl~kl~~l~~~-----~~~~~~~~--------~~~~D~~ils~~~~~i 714 (869)
T Consensus 613 GADalRl~l~~~~~~~~d~~f~~~~v~e~~r~~~~~lwN~~rF~~~y~~ld~f~~~~~~~~~~~~~~~DrWils~l~~~i 692 (1042)
T PRK06039 613 GADALRWYLLSSSVPWEDLRFSEDGIREVVRKFLLPLWNVYSFFALYANLDGFDPNEAEEALDSRNELDRWILSRLNSLV 692 (1042)
T ss_pred CCHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 82799999996677555615779999999999999999999999874210279954355563216687899999999999
Q ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
Q ss_conf 99999988168899999999999999999986211000221--------7999999999999997223438999999982
Q gi|254780802|r 715 ERIEENYQNLSFNKAVANIHELVNVISKPLMEIAKKKSNAD--------RISTIRYILEKLIIMMSPMIPHLAEECWQLL 786 (869)
Q Consensus 715 ~~v~~~~e~~~f~~ai~~i~~f~n~ls~~y~~~~k~~~~~~--------~~~~l~~vl~~l~~lLaPi~PhiaEEiw~~L 786 (869)
T Consensus 693 ~~v~~~~~~y~~~~a~~~l~~Fi~dLs~wYi~~~r~R~~~~~~~~~k~~A~~tL~~vL~~l~~llAP~~PFitEeiyq~L 772 (1042)
T PRK06039 693 KEVTEALDNYDITKAARAIRDFVDDLSNWYIRRSRRRFWKEEDDPDKLAAYNTLYTVLETLSRLMAPFTPFIAEEIYQNL 772 (1042)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
T ss_conf 99999997245999999999999887799999977876036897899999999999999999996501367699999844
Q ss_pred ---CCCCCEEECCCCCCCHHH
Q ss_conf ---899835517886659678
Q gi|254780802|r 787 ---GNAGLVAQQKWPKLDPIL 804 (869)
Q Consensus 787 ---g~~~~i~~~~WP~~d~~~ 804 (869)
T Consensus 773 ~~~~~~eSVHl~~~P~~~~~~ 793 (1042)
T PRK06039 773 KGETGPESVHLADWPEVDESL 793 (1042)
T ss_pred CCCCCCCEEEEECCCCCCHHH
T ss_conf 558999517981467766121