HHsearch alignment for GI: 254780802 and conserved domain: PRK12451
>PRK12451 arginyl-tRNA synthetase; Reviewed.
Probab=98.61 E-value=1e-06 Score=63.98 Aligned_cols=121 Identities=16% Similarity=0.234 Sum_probs=84.6
Q ss_pred CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH-------------------
Q ss_conf 8883899807789789874004779778999999777189855676881402058999999-------------------
Q gi|254780802|r 32 NKKKYFVLEMFPYPSGNIHMGHLRNYVIGDVVARFMRASGYSVLHPMGWDAFGMPAENAAR------------------- 92 (869)
Q Consensus 32 ~~~kf~i~~~pPy~nG~lHiGH~~~~t~~Dv~aRy~rm~G~~Vl~~~G~d~~GlPie~~~~------------------- 92 (869)
T Consensus 111 ~~k~v~vEfvSaNPtgpLHVGH~R~aiiGdsLariL~~~G~~V~reyYinD~G~Qi~~l~~~~~~~~~~~~~~~~~~~~l 190 (562)
T PRK12451 111 CEKTVVIDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKWGNEAVVKEDPIREL 190 (562)
T ss_pred CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH
T ss_conf 99879998528999988624224627999999999998698599999747730899999999998544011246757899
Q ss_pred --------H---H----------------CCCHH------HHHHHHHHHHHHHHHHCCCEEECCCCEECCCHHHHHHHHH
Q ss_conf --------8---0----------------99999------9999999999999998191766469821477359999999
Q gi|254780802|r 93 --------E---H----------------NVHPK------MWTYQNIKVMRKQLQSIGLSIDWSKDFATCDVDYYHCQQL 139 (869)
Q Consensus 93 --------e---~----------------~~~~~------~~~~~~i~~~k~~~~~lG~~~DW~r~y~T~d~~y~~~v~w 139 (869)
T Consensus 191 ~~~y~~~~~~~~~~~~~~~~~~~~~~~le~~d~~~~~~~~~~~~~~l~~~~~~l~~l~v~fD~---~-~~Es~~~~~~~~ 266 (562)
T PRK12451 191 FKLYVQFHEEVKDDEELEEEGRAWFKKLEEGDEEAVELWNWFRHESLKEFSRIYELLGVEFTN---F-QGEAFYNNLMED 266 (562)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE---E-ECHHHHHHHHHH
T ss_conf 999999998650480068999999998766899999999999999999999999992972014---5-232445124789
Q ss_pred HHHHHHHCCCEEECCEE
Q ss_conf 99999988963412213
Q gi|254780802|r 140 LFLDFMKHNVIVRKTAQ 156 (869)
Q Consensus 140 ~f~~L~~kGliyrg~~p 156 (869)
T Consensus 267 ~i~~L~~~g~~~e~dGA 283 (562)
T PRK12451 267 FIGILEEHDLLEESEGA 283 (562)
T ss_pred HHHHHHHCCCEEECCCC
T ss_conf 99999977978947997