HHsearch alignment for GI: 254780802 and conserved domain: PRK13804
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional.
Probab=100.00 E-value=0 Score=1226.32 Aligned_cols=681 Identities=22% Similarity=0.322 Sum_probs=511.1
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCC--CCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 765689998999999998598036--767888838998077897898740047797789999997771898556768814
Q gi|254780802|r 4 RSYSPQETDSIWQSAWYDSNIFKA--ENGKNKKKYFVLEMFPYPSGNIHMGHLRNYVIGDVVARFMRASGYSVLHPMGWD 81 (869)
Q Consensus 4 ~~y~~~~iE~kwq~~W~~~~~fe~--~~~~~~~kf~i~~~pPy~nG~lHiGH~~~~t~~Dv~aRy~rm~G~~Vl~~~G~d 81 (869)
T Consensus 22 ~r~nl~~~E~~~~~~W~~~~~y~~~~~~~~~~~~f~~~dGPPyanG~lH~GHaln~tikDii~Rykrm~G~~V~~~~GwD 101 (966)
T PRK13804 22 MRAGLPQKEPEIQARWEEIDLYKKLREQAKGRPKFVLHDGPPYANGNIHIGHALNKILKDVIVRSKQMLGFDANYVPGWD 101 (966)
T ss_pred CCCCCHHHCHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 88881232699999987548999999856899976995799999998612255666899999999874899668999768
Q ss_pred CCCHHHHHHHHHH----C------------CCHHHHHHHHHHHHHHHHHHCCCEEECCCCEECCCHHHHHHHHHHHHHHH
Q ss_conf 0205899999980----9------------99999999999999999998191766469821477359999999999999
Q gi|254780802|r 82 AFGMPAENAAREH----N------------VHPKMWTYQNIKVMRKQLQSIGLSIDWSKDFATCDVDYYHCQQLLFLDFM 145 (869)
Q Consensus 82 ~~GlPie~~~~e~----~------------~~~~~~~~~~i~~~k~~~~~lG~~~DW~r~y~T~d~~y~~~v~w~f~~L~ 145 (869)
T Consensus 102 ~hGLPiE~~vek~l~~~~~~~~~~~~~~f~~~cr~~a~~~i~~~~~q~~rlG~~~DW~~~y~T~dp~y~~~~~~~F~~l~ 181 (966)
T PRK13804 102 CHGLPIEWKIEEKYRAKGKNKDEVPLNEFRKECREYALSWIDVQREEFKRLGVIGDWENPYTTMDFHAEARIAREFMKFA 181 (966)
T ss_pred CCCHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 88789999999977652898233899999999999999999999999998292022589842289899999999999999
Q ss_pred HCCCEEECCEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 88963412213321477676778989843853345643223347523343034445443210022554322222100014
Q gi|254780802|r 146 KHNVIVRKTAQVNWDPVEQTVLANEQVINGRGWRSDAPVEQRSLPQWFFKISDLSQELLDSIETLSEWPEKVKIMQKNWI 225 (869)
Q Consensus 146 ~kGliyrg~~pV~wcp~~~t~la~~Ev~~g~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~l~~~p~~v~~~~~~~i 225 (869)
T Consensus 182 ekGliYr~~~pV~Wcp~~~TaLA~~EVey~d----------~~s~s~~-------------------------------- 219 (966)
T PRK13804 182 AKGQLYRGSKPVMWSVVERTALAEAEVEYHD----------HESDTIW-------------------------------- 219 (966)
T ss_pred HCCCEEECCCCCCCCCCCCCCHHHHHHCCCC----------EECCEEE--------------------------------
T ss_conf 8799884385147689888662367547667----------8666699--------------------------------
Q ss_pred CCCCCCCCCCCCCCCC--CCCCCEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHC-----------CHHH-HHHHHHHH
Q ss_conf 5576754535556777--77751365320013444323200330244320345413-----------1458-99988653
Q gi|254780802|r 226 GRSEGMEIRWEIVSNT--IDQIEEILVYTTRPETIFGASFIAIAVDHSISEKLSCD-----------NTDI-KEFCDEEK 291 (869)
Q Consensus 226 ~~~~~~~~~~~~~~~~--~~~~~~l~~~TtrPeTl~g~~~i~v~~~~~~~~~~~~~-----------~~~~-~~~~~~~~ 291 (869)
T Consensus 220 -------v~f~v~~~~~~~~~~~~l~iwTTtPwTl~~n~avav~p~~~Y~~~~~~~~~~~~~~~~~~~~i~a~~l~e~~~ 292 (966)
T PRK13804 220 -------VKFPVKDGKGILLTGASVVIWTTTPWTIPANRAISYSPDIEYGLYEVTGAENDNWAKPGEKLVVADALAESVA 292 (966)
T ss_pred -------EEEEECCCCCCCCCCCCEEEEECCCCHHHCCCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHH
T ss_conf -------9987346620004787067750785022021020245776437899504542112445515665477899999
Q ss_pred HH-HHHHHHHHHHCCCCCCCCCEECCCCCC-----CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC-
Q ss_conf 11-112455543025532378610377777-----41577631123454533322211134672110122103544321-
Q gi|254780802|r 292 QK-GTSLSVLDKTEKKGIYTGIHVKHPLNP-----NVVIPVYIANFVFMNYGTGAIFGCPFADQRDMDFAKKYGLPIIP- 364 (869)
Q Consensus 292 ~~-~~~~~~~~~~~~~~~~~G~~~~~P~~~-----~~~ipv~~~~~V~~~~GTG~V~~~P~h~~~D~~~~~k~glpi~~- 364 (869)
T Consensus 293 ~~~~~~~~~~~~~~~G~~l~g~~~~~Pl~~~~~~~~~~~pi~~~d~V~~~~GTG~Vh~aPaHg~~Dy~~~~k~~L~~~~~ 372 (966)
T PRK13804 293 KKAGVESFERVRDVKADDLEAIVCAHPLKGLDGGYEFEVPVLDGDHVTDDAGTGFVHTAPGHGREDFEVWMKYGRELEVR 372 (966)
T ss_pred HHHCCCCEEEEEEECCCEECCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCC
T ss_conf 87376422787300150004766526665556666715789816831567785637755778878899999839873103
Q ss_pred -----CCCCCCCCCCCCCCH---------------------------HHCCCCCCCCCCHHHCCCCHH------------
Q ss_conf -----016776555422211---------------------------210123344583000135646------------
Q gi|254780802|r 365 -----IMKRSINHSQDIEEG---------------------------KAFSGDGIMINSSFLDGMTNT------------ 400 (869)
Q Consensus 365 -----v~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~g~~~~------------ 400 (869)
T Consensus 373 ~~i~~~vd~~G~~~~~~~~~~g~~v~~~~G~~~~~a~~~Ii~~L~e~g~L~~~~~~~HsyP~~wR~~~Pvi~r~t~QWFi 452 (966)
T PRK13804 373 TAIPFTVDEDGFYTEDAPGFGGARVIDDKGKKYGDANKAVIEALIEAGLLLARGRLKHSYPHSWRSKKPVIFRNTPQWFI 452 (966)
T ss_pred CCCCCCCCCCCEECCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEE
T ss_conf 57787568876065456001255421346873656279999999967996455641247763456786279960461478
Q ss_pred ----------HHHHHHHHHHHHHCCCCCCHHHHHHHHHC---CCCCCCCCCCCCCCCCCCCCCCCCCEECCCC-----CC
Q ss_conf ----------65488899997404677520222111000---1112211232222234223334684634742-----00
Q gi|254780802|r 401 ----------EALQAVMSHLEKQNIKNSPIGKRKINFRL---RDWCISRQRSWGCPIPVIHCQKCGIVELPKE-----DL 462 (869)
Q Consensus 401 ----------~~~~~i~~~l~~~~~~~~~~~~~~~~~~l---~DW~ISRqr~WG~piPv~~~~~~~~~~~~~~-----~l 462 (869)
T Consensus 453 ~~~~~~~~~~~lr~~~l~~i~~v~~~P~-~~~~r~~~~l~~~~DW~ISRQRyWG~PIPi~~~e~~~~~~~~~~~~~i~~~ 531 (966)
T PRK13804 453 SMDKDLGDGGTLRSRALDAIKKTRFVPA-AGQNRLRGMIEDRPDWVISRQRAWGVPIPVFVDENGEILMDDEVNERIADA 531 (966)
T ss_pred EECCCCCCHHHHHHHHHHHHHHCCCCCH-HHHHHHHHCCCCCCCCEEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHH
T ss_conf 7353432138999999987654350653-434455512157867666311345887517983799744575677899999
Q ss_pred CHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Q ss_conf 0111001000224542100245642110136764435643234566643--33223355565441013566411433440
Q gi|254780802|r 463 PVQLPEDLDFTLPGNPLENHPTWKKIFCVKCGSEALRETDTMDTFVDSS--WYYMRYMTPHAKDPINKELVRQWFPVDQY 540 (869)
Q Consensus 463 ~v~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~dvld~w~dS~--~~~~~~~~~~~~~~~~~e~~~~~~P~D~~ 540 (869)
T Consensus 532 ~~~~g~d~w~~~-------~~~~~~~~~~~~~~~~~r~~DvlD~WfdSgss~~~~~-----------~~~~~~~~PaD~y 593 (966)
T PRK13804 532 FEEEGADAWFAE-------GAKERFLGGFHPGEEWTKVTDILDVWFDSGSTHAFVL-----------EDRPDLPWPADLY 593 (966)
T ss_pred HHHHCCCCCCCC-------CHHHHCCCCCCCHHHHEECCCHHHHHHHCCCCCCCCC-----------CCHHHCCCCCCEE
T ss_conf 876187633345-------7476558887874550741311446651577532011-----------5854458974168
Q ss_pred CCCCCCCCCCCHHHHHHH-HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHCCCCCCCCCCCEECC
Q ss_conf 145554433202345553-2013478732232002222355323224332358700130620221025677754411048
Q gi|254780802|r 541 IGGIEHAVLHLLYARFFA-HILKKIGYIEIDEPFKRLFTQGMVVHETYYQLEGIKKKYLKPDEVILRNIEGENCAFRLSD 619 (869)
Q Consensus 541 i~g~d~~~~~~~~~r~~~-~~l~~~g~~~~~~pf~~l~~~G~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 619 (869)
T Consensus 594 ~eG~Dq~-------rgWF~s~l~~s~~~~~~~Pfk~v~~hG~VlDe---------------------------------- 632 (966)
T PRK13804 594 LEGSDQH-------RGWFHSSLLESCGTRGRAPYKAVLTHGFTLDE---------------------------------- 632 (966)
T ss_pred ECCCCHH-------HHHHHHHHHHHHCCCCCCCCCCEEECCEEECC----------------------------------
T ss_conf 6254188-------86999999874220688774510341168988----------------------------------
Q ss_pred CCEEEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH---HHHHCCCC
Q ss_conf 970640474210000001222210012346335666553013321111134321011455677889999---97630246
Q gi|254780802|r 620 NSKVVIGPLEKMSKSKKNVIDPMKVIKSYGADTARLFVLSDSPPDRDIIWSNKGVDSTYQFIQQIWRLI---YNAKDELQ 696 (869)
Q Consensus 620 ~~~~~~~~g~KMSKSkGNvi~p~~~i~~yGaD~lRl~~~~~~~~~~d~~~s~~~i~~~~rfl~kl~~l~---~~~~~~~~ 696 (869)
T Consensus 633 -------~G~KMSKS~GNvvdP~~ii~~yGADalRl~~as-~~~~~d~~~~~~~l~~~~~~~~ki~Nt~rf~l~nl~~f~ 704 (966)
T PRK13804 633 -------KGEKMSKSLGNVVDPQDVIKQSGADILRLWVAS-VDYQDDQRIGKEILKTNAETYRKLRNTLRWMLGTLAHFD 704 (966)
T ss_pred -------CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf -------988887878898998999987292188899984-775446345689999999999999999999998642798
Q ss_pred CC-------CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH-HHHHHHHHHHCCCCCCCC---------HHHH
Q ss_conf 67-------897569999999999999999988168899999999999-999999986211000221---------7999
Q gi|254780802|r 697 TS-------STKKDISLISKSTKFLERIEENYQNLSFNKAVANIHELV-NVISKPLMEIAKKKSNAD---------RIST 759 (869)
Q Consensus 697 ~~-------~~~~D~~ils~~~~~i~~v~~~~e~~~f~~ai~~i~~f~-n~ls~~y~~~~k~~~~~~---------~~~~ 759 (869)
T Consensus 705 ~~~~~~~~~l~~~D~wil~~l~~~~~~v~~~~~~Y~f~~a~~~l~~F~~~dLs~~Yle~~Kdrly~~~~~~~~rrsaq~~ 784 (966)
T PRK13804 705 PGEAVAYADLPELERLMLHRLNELDATVRKAYEAFDFKTIYKALVNFMTVDLSAFYFDIRKDALYCDAPSSLRRKAALTV 784 (966)
T ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 32348922352878999999999999999985113599999999999998787999988437540579983999999999
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHC--CCCCCEEECCCCCCC
Q ss_conf 999999999997223438999999982--899835517886659
Q gi|254780802|r 760 IRYILEKLIIMMSPMIPHLAEECWQLL--GNAGLVAQQKWPKLD 801 (869)
Q Consensus 760 l~~vl~~l~~lLaPi~PhiaEEiw~~L--g~~~~i~~~~WP~~d 801 (869)
T Consensus 785 L~~il~~l~~llAPi~Pf~aEEiw~~~~~~~~~Sv~l~~~p~~~ 828 (966)
T PRK13804 785 IYEIFDRLTKWLAPILPFTTEEAWLYRYPEEEVSVHLEQFPETP 828 (966)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCC
T ss_conf 99999999999976728999999972557899876711489997