HHsearch alignment for GI: 254780802 and conserved domain: cd00805
>cd00805 TyrRS_core Tyrosinyl-tRNA synthetase (TyrRS) catalytic core domain. TyrRS is a homodimer, which attaches Tyr to the appropriate tRNA. TyrRS is a class I tRNA synthetases, so it aminoacylates the 2'-OH of the nucleotide at the 3' end of the tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formationof the enzyme bound aminoacyl-adenylate. It contains the class I characteristic HIGH and KMSKS motifs, which are involved in ATP binding.
Probab=92.48 E-value=0.056 Score=31.54 Aligned_cols=15 Identities=47% Similarity=0.171 Sum_probs=12.2
Q ss_pred CCCCCCHHHCCCCCC
Q ss_conf 474210000001222
Q gi|254780802|r 626 GPLEKMSKSKKNVID 640 (869)
Q Consensus 626 ~~g~KMSKSkGNvi~ 640 (869)
T Consensus 190 ~dG~KMSKS~~N~i~ 204 (268)
T cd00805 190 LDGGKMSKSEGNAIW 204 (268)
T ss_pred CCCCCCCCCCCCCCC
T ss_conf 998744678999501