HHsearch alignment for GI: 254780802 and conserved domain: cd07958

>cd07958 Anticodon_Ia_Leu_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases. This domain is found in leucyl tRNA synthetases (LeuRS), which belong to the class Ia aminoacyl tRNA synthetases. It lies C-terminal to the catalytic core domain. In contrast to other class Ia enzymes, the anticodon is not used as an identity element in LeuRS (with exceptions such as Saccharomyces cerevisiae and some other eukaryotes). No anticodon-binding site can be defined for this family, which includes bacterial and eukaryotic mitochondrial members, as well as LeuRS from the archaeal Halobacteria. LeuRS catalyzes the transfer of leucine to the 3'-end of its tRNA.
Probab=99.90  E-value=1.1e-22  Score=173.34  Aligned_cols=112  Identities=34%  Similarity=0.694  Sum_probs=97.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHCCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf             3432101145567788999997630246-----67897569999999999999999988168899999999999999999
Q gi|254780802|r  669 WSNKGVDSTYQFIQQIWRLIYNAKDELQ-----TSSTKKDISLISKSTKFLERIEENYQNLSFNKAVANIHELVNVISKP  743 (869)
Q Consensus       669 ~s~~~i~~~~rfl~kl~~l~~~~~~~~~-----~~~~~~D~~ils~~~~~i~~v~~~~e~~~f~~ai~~i~~f~n~ls~~  743 (869)
T Consensus         1 Wse~gIeg~~rFl~KlW~l~~~~~~~~~~~~~~~~~~~~d~~i~~~l~~~i~~vt~~~e~~~fN~aia~l~ef~N~l~~~   80 (117)
T cd07958           1 WSDSGVEGAYRFLNRVWRLVTELAEALAAPAAAAELSEEDKELRRKLHKTIKKVTEDIERLRFNTAIAALMELVNALYKY   80 (117)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf             98006999999999999999988863134556544667449999999999999999998522059999999999999884


Q ss_pred             HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
Q ss_conf             9862110002217999999999999997223438999999982
Q gi|254780802|r  744 LMEIAKKKSNADRISTIRYILEKLIIMMSPMIPHLAEECWQLL  786 (869)
Q Consensus       744 y~~~~k~~~~~~~~~~l~~vl~~l~~lLaPi~PhiaEEiw~~L  786 (869)
T Consensus        81 ~~------~~~~~~~~~~~~l~~ll~lL~P~~PHiaEElW~~L  117 (117)
T cd07958          81 KK------KDAQHAAVLREALETLVLLLAPFAPHIAEELWEEL  117 (117)
T ss_pred             HC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             61------44114999999999999998842479999998539