HHsearch alignment for GI: 254780802 and conserved domain: cd07959

>cd07959 Anticodon_Ia_Leu_AEc Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases. This domain is found in leucyl tRNA synthetases (LeuRS), which belong to the class Ia aminoacyl tRNA synthetases. It lies C-terminal to the catalytic core domain. In contrast to other class Ia enzymes, the anticodon is not used as an identity element in LeuRS (with exceptions such as Saccharomyces cerevisiae and some other eukaryotes). No anticodon-binding site can be defined for this family, which includes archaeal and eukaryotic cytoplasmic members. LeuRS catalyzes the transfer of leucine to the 3'-end of its tRNA.
Probab=99.81  E-value=9e-19  Score=146.65  Aligned_cols=114  Identities=23%  Similarity=0.335  Sum_probs=97.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH-HHHHHHHHHHHH
Q ss_conf             34321011455677889999976302466--789756999999999999999998816889999999-999999999998
Q gi|254780802|r  669 WSNKGVDSTYQFIQQIWRLIYNAKDELQT--SSTKKDISLISKSTKFLERIEENYQNLSFNKAVANI-HELVNVISKPLM  745 (869)
Q Consensus       669 ~s~~~i~~~~rfl~kl~~l~~~~~~~~~~--~~~~~D~~ils~~~~~i~~v~~~~e~~~f~~ai~~i-~~f~n~ls~~y~  745 (869)
T Consensus         1 f~~~~a~~~~~~L~~~~~~~~e~~~~~~~~~~~~~~Dkw~ls~l~~~i~~~~~a~e~~~fr~a~~~~~~~l~~~~-~~Y~   79 (117)
T cd07959           1 FREEEANSAILRLERFYELAEELIETEGELEELTFIDRWLLSRLNRLIKETTEAYENMQFREALKEGLYELQNDL-DWYR   79 (117)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_conf             918789999999999999999998625778889776899999999999999999998788789999999999999-9999


Q ss_pred             HHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
Q ss_conf             62110002217999999999999997223438999999982
Q gi|254780802|r  746 EIAKKKSNADRISTIRYILEKLIIMMSPMIPHLAEECWQLL  786 (869)
Q Consensus       746 ~~~k~~~~~~~~~~l~~vl~~l~~lLaPi~PhiaEEiw~~L  786 (869)
T Consensus        80 ~~~~~~---~~~~~l~~~l~~~~~lLaP~~PhiaEEiW~~l  117 (117)
T cd07959          80 ERGGAG---MNKDLLRRFIEVWTRLLAPFAPHLAEEIWHEL  117 (117)
T ss_pred             HHHCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             984554---14999999999999998473348699998639