HHsearch alignment for GI: 254780802 and conserved domain: cd07962
>cd07962 Anticodon_Ia_Val Anticodon-binding domain of valyl tRNA synthetases. This domain is found in valyl tRNA synthetases (ValRS), which belong to the class Ia aminoacyl tRNA synthetases. It lies C-terminal to the catalytic core domain, and recognizes and specifically binds to the tRNA anticodon. ValRS catalyzes the transfer of valine to the 3'-end of its tRNA.
Probab=99.89 E-value=2e-22 Score=171.71 Aligned_cols=118 Identities=24% Similarity=0.441 Sum_probs=101.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHC---CCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH-H
Q ss_conf 3432101145567788999997630---246------67897569999999999999999988168899999999999-9
Q gi|254780802|r 669 WSNKGVDSTYQFIQQIWRLIYNAKD---ELQ------TSSTKKDISLISKSTKFLERIEENYQNLSFNKAVANIHELV-N 738 (869)
Q Consensus 669 ~s~~~i~~~~rfl~kl~~l~~~~~~---~~~------~~~~~~D~~ils~~~~~i~~v~~~~e~~~f~~ai~~i~~f~-n 738 (869)
T Consensus 1 ~~e~~i~~~~rf~nKlwN~~rf~~~~~~~~~~~~~~~~~~~~~Dkwil~~l~~~~~~i~~~~~~~~f~~a~~~l~~F~~~ 80 (135)
T cd07962 1 FDEKRVEGGRNFCNKLWNAARFVLMNLEDDDEPEEDPESLSLADRWILSRLNKTVEEVTEALENYRFSEAATALYEFFWN 80 (135)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 98999899999999999999999875453687546610077999999999999999999999865899999999999899
Q ss_pred HHHHHHHHHCCCCCCCC-------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
Q ss_conf 99999986211000221-------7999999999999997223438999999982
Q gi|254780802|r 739 VISKPLMEIAKKKSNAD-------RISTIRYILEKLIIMMSPMIPHLAEECWQLL 786 (869)
Q Consensus 739 ~ls~~y~~~~k~~~~~~-------~~~~l~~vl~~l~~lLaPi~PhiaEEiw~~L 786 (869)
T Consensus 81 ~ls~~Yie~~K~rl~~~~~~~~~~~~~~l~~~l~~~l~llaP~~PfitEeiw~~l 135 (135)
T cd07962 81 DFCDWYLELVKPRLYGEDEEEKKAARATLYYVLETILRLLHPFMPFITEELWQRL 135 (135)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9989999997998729978999999999999999999999878799999998439