RPSBLAST alignment for GI: 254780802 and conserved domain: cd00814
>gnl|CDD|173907 cd00814, MetRS_core, catalytic core domain of methioninyl-tRNA synthetases. Methionine tRNA synthetase (MetRS) catalytic core domain. This class I enzyme aminoacylates the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. MetRS, which consists of the core domain and an anti-codon binding domain, functions as a monomer. However, in some species the anti-codon binding domain is followed by an EMAP domain. In this case, MetRS functions as a homodimer. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. As a result of a deletion event, MetRS has a significantly shorter core domain insertion than IleRS, ValRS, and LeuR. Consequently, the MetRS insertion lacks the editing function. Length = 319
Score = 88.7 bits (221), Expect = 6e-18
Identities = 46/194 (23%), Positives = 73/194 (37%), Gaps = 22/194 (11%)
Query: 35 KYFVLEMFPYPSGNIHMGHLRNYVIGDVVARFMRASGYSVLHPMGWDAFGMPAENAAREH 94
K + PY +G H+GHL V+ DV AR+ R GY VL G D G E A E
Sbjct: 1 KVLITTALPYVNGVPHLGHLYGTVLADVFARYQRLRGYDVLFVTGTDEHGTKIEQKAEEE 60
Query: 95 NVHPKMWTYQNIKVMRKQLQSIGLSIDWSKDFA-TCDVDYYHCQQLLFLDFMKHNVIVRK 153
V P+ + ++ + + + +S D F T + Q F ++ I
Sbjct: 61 GVTPQELCDKYHEIFKDLFKWLNISFD---YFIRTTSPRHKEIVQEFFKKLYENGYIYEG 117
Query: 154 TAQVNWDPVEQTVLANEQVINGRGWRSDAPVEQRSLPQWFFKISDLSQELLDSIET--LS 211
+ + + L E R +FF++S LL+ +E
Sbjct: 118 EYEGLYCVSCERFLP----------------EWREEEHYFFRLSKFQDRLLEWLEKNPDF 161
Query: 212 EWPEKVKIMQKNWI 225
WPE + +W+
Sbjct: 162 IWPENARNEVLSWL 175