HHsearch alignment for GI: 254780803 and conserved domain: COG2980
>COG2980 RlpB Rare lipoprotein B [Cell envelope biogenesis, outer membrane].
Probab=98.72 E-value=1e-06 Score=60.70 Aligned_cols=150 Identities=12% Similarity=0.098 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEE--EEEEECCCCHHHHHHHHHHHHHCCCC--CCCCCEEEEEEE-CCC
Q ss_conf 9999999999998368514334157767202232--57840777414489999999731477--776716899971-000
Q gi|254780803|r 7 LRILVVFNFFLLINSCSVYPFYYLKNQDRTEYIH--PIKVLVVSKNNKNEIYRSINFLTSTV--RTKNLYQLEVNI-DSF 81 (165)
Q Consensus 7 ~k~l~~~~~~~~ls~CGf~PlY~~~~~~~~~~l~--~I~i~~~~~r~~~~i~n~L~~~~~~~--~~~~~y~l~i~~-~~~ 81 (165)
T Consensus 4 L~~~lL~~a~~~L~aCGFh-LRg--~~~ip~~l~~l~l~s~d~y~~l~r~vrr~L~~n~v~vv~~~~~~p~Lri~se~~~ 80 (178)
T COG2980 4 LKTLLLLAAVLLLAACGFH-LRG--TTQIPPELKTLSLESSDPYGPLTRAVRRQLRLNGVDVVDTAKDVPVLRILSESTS 80 (178)
T ss_pred HHHHHHHHHHHHHHHCCEE-ECC--CCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEECCEECC
T ss_conf 5899999999997334534-317--8889941133155436898768999999999849645314778607886022215
Q ss_pred -EEECCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q ss_conf -000002467650489999999999980589587742579998606776157799999999-999999999999999999
Q gi|254780803|r 82 -TDHAISNAFFKNIGRITLKAKYYFKEISGKNILYENNTDVTSLFDFSDQQFSQLRSHKSS-EEKAIQELSENIYIDIIS 159 (165)
Q Consensus 82 -~~~~i~~~~~~~~~~~~~~~~y~L~~~~~~~~i~~~~~~~~~~Y~~~~~~f~~~~~e~~a-~erl~~~lae~I~~~i~~ 159 (165)
T Consensus 81 ~~t~Si~~~gr~aEy~L~~~v~a~v~~~-~~~v~~p~~v~V~R~~~dn~~~aLaK~~E~e~l~~EMR~daa~QLvrrl~s 159 (178)
T COG2980 81 QRTASIFRQGRAAEYQLTLTVEAQVLDP-NDDVLYPISVKVFRSFFDNPNMALAKDEEREMLWNEMRRDAAEQLVRRLAS 159 (178)
T ss_pred CCEEEEEHHHHHHHHHEEEEEEEEEECC-CCCCCCCEEEEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5327863214666561246889999818-987568647899885105877775233789999999999999999999987
Q ss_pred H
Q ss_conf 9
Q gi|254780803|r 160 F 160 (165)
Q Consensus 160 ~ 160 (165)
T Consensus 160 l 160 (178)
T COG2980 160 L 160 (178)
T ss_pred H
T ss_conf 1