HHsearch alignment for GI: 254780803 and conserved domain: PRK10796
>PRK10796 LPS-assembly lipoprotein RlpB; Provisional.
Probab=98.76 E-value=2.1e-06 Score=58.74 Aligned_cols=153 Identities=10% Similarity=0.039 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEEECC--CCHHHHHHHHHHHHHC----CCCCC-CCCEEEEEE
Q ss_conf 8899999999999983685143341577672022325784077--7414489999999731----47777-671689997
Q gi|254780803|r 5 RILRILVVFNFFLLINSCSVYPFYYLKNQDRTEYIHPIKVLVV--SKNNKNEIYRSINFLT----STVRT-KNLYQLEVN 77 (165)
Q Consensus 5 ri~k~l~~~~~~~~ls~CGf~PlY~~~~~~~~~~l~~I~i~~~--~~r~~~~i~n~L~~~~----~~~~~-~~~y~l~i~ 77 (165)
T Consensus 2 r~l~~l~l~lavll~agCGFh-LRg--~~~lP~~l~tL~l~S~Dpys~Ltr~vr~qLr~~gV~lv~~~~~~~~vp~L~i~ 78 (196)
T PRK10796 2 RYLATLLLSLAVLVTAGCGWH-LRG--TTQVPSEMKTMILDSGDPNGPLSRAVRNQLRLNGVELLDKDTTRKDVPSLRLG 78 (196)
T ss_pred HHHHHHHHHHHHHHHCCCCCE-ECC--CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEC
T ss_conf 569999999999997476715-768--99998644458998048786799999999987795896378752458569971
Q ss_pred ECC-CEEE-CCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEEEEEEEECCCCCH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 100-0000-00246765048999999999998058958774257999860677615-77999999999999999999999
Q gi|254780803|r 78 IDS-FTDH-AISNAFFKNIGRITLKAKYYFKEISGKNILYENNTDVTSLFDFSDQQ-FSQLRSHKSSEEKAIQELSENIY 154 (165)
Q Consensus 78 ~~~-~~~~-~i~~~~~~~~~~~~~~~~y~L~~~~~~~~i~~~~~~~~~~Y~~~~~~-f~~~~~e~~a~erl~~~lae~I~ 154 (165)
T Consensus 79 ~e~~~~rtlSl~~~Gr~AEYeL~~~V~~~v~~-P-~~~~~p~~~~v~R~y~dnp~~aLAKs~E~elL~~EMR~~aA~Qii 156 (196)
T PRK10796 79 GVSISQDTASVFRNGQTAEYQMVMTVNAQVLI-P-GHDIYPISVKVFRSFFDNPQMALAKDNEQDMIVQEMYDQAAEQLI 156 (196)
T ss_pred CCCCCCEEEEECCCCHHHHHEEEEEEEEEEEE-C-CCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 56555316988157465201788899999995-7-986056688999823479778762699999999999999999999
Q ss_pred HHHHHHHH
Q ss_conf 99999974
Q gi|254780803|r 155 IDIISFIR 162 (165)
Q Consensus 155 ~~i~~~l~ 162 (165)
T Consensus 157 RrL~~v~~ 164 (196)
T PRK10796 157 RKLLSVRA 164 (196)
T ss_pred HHHHHHHH
T ss_conf 99866408