HHsearch alignment for GI: 254780803 and conserved domain: pfam04390
>pfam04390 RplB Rare lipoprotein B family. The Escherichia coli family member has been named Rare lipoprotein B (RplB). Thioglyceride and N-fatty acyl residues may be attached to the N-terminal cysteine, which is conserved in this family. RplB is speculated to be involved in cell duplication.
Probab=98.13 E-value=0.0004 Score=44.86 Aligned_cols=124 Identities=6% Similarity=0.020 Sum_probs=80.9
Q ss_pred CEEEEEEEEE--CCCCHHHHHHHHHHHHHCC--CCCCCCCEEEEEEECCCEEE--CCCCCCCCCEEEEEEEEEEEEEECC
Q ss_conf 0223257840--7774144899999997314--77776716899971000000--0024676504899999999999805
Q gi|254780803|r 36 TEYIHPIKVL--VVSKNNKNEIYRSINFLTS--TVRTKNLYQLEVNIDSFTDH--AISNAFFKNIGRITLKAKYYFKEIS 109 (165)
Q Consensus 36 ~~~l~~I~i~--~~~~r~~~~i~n~L~~~~~--~~~~~~~y~l~i~~~~~~~~--~i~~~~~~~~~~~~~~~~y~L~~~~ 109 (165)
T Consensus 11 ~~~~~~l~l~s~~~~~~l~~~l~~~L~~~gv~v~~~~~a~~~L~i~~~~~~rr~lSv~~~grv~EYeL~~~v~~~v~~~~ 90 (145)
T pfam04390 11 PLALKTLYLSSSDPYSELTRELRRQLRLSGVKVVDDAAADPVLRLLSESRSRRTLSLFSQGRVAEYELTYTVNFRVRDPN 90 (145)
T ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEEEEEEEEEEECCC
T ss_conf 98867799993699987999999999887988826877856999824611079998747972102899999999998699
Q ss_pred CCCEEEEEEEEEEEEECCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89587742579998606776157-799999999999999999999999999
Q gi|254780803|r 110 GKNILYENNTDVTSLFDFSDQQF-SQLRSHKSSEEKAIQELSENIYIDIIS 159 (165)
Q Consensus 110 ~~~~i~~~~~~~~~~Y~~~~~~f-~~~~~e~~a~erl~~~lae~I~~~i~~ 159 (165)
T Consensus 91 g~~l~~~~~i~~~R~~~~d~~~~Lak~~Ee~~L~~eM~~d~a~qIlrRL~~ 141 (145)
T pfam04390 91 GELLIPPTTVEVRRDYLDDPNNALAKSQEEELLRREMRRDAAQQIIRRLAA 141 (145)
T ss_pred CCCCCCCEEEEEEEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 987138768999998412956762319999999999999999999999874