HHsearch alignment for GI: 254780803 and conserved domain: pfam04390

>pfam04390 RplB Rare lipoprotein B family. The Escherichia coli family member has been named Rare lipoprotein B (RplB). Thioglyceride and N-fatty acyl residues may be attached to the N-terminal cysteine, which is conserved in this family. RplB is speculated to be involved in cell duplication.
Probab=98.13  E-value=0.0004  Score=44.86  Aligned_cols=124  Identities=6%  Similarity=0.020  Sum_probs=80.9

Q ss_pred             CEEEEEEEEE--CCCCHHHHHHHHHHHHHCC--CCCCCCCEEEEEEECCCEEE--CCCCCCCCCEEEEEEEEEEEEEECC
Q ss_conf             0223257840--7774144899999997314--77776716899971000000--0024676504899999999999805
Q gi|254780803|r   36 TEYIHPIKVL--VVSKNNKNEIYRSINFLTS--TVRTKNLYQLEVNIDSFTDH--AISNAFFKNIGRITLKAKYYFKEIS  109 (165)
Q Consensus        36 ~~~l~~I~i~--~~~~r~~~~i~n~L~~~~~--~~~~~~~y~l~i~~~~~~~~--~i~~~~~~~~~~~~~~~~y~L~~~~  109 (165)
T Consensus        11 ~~~~~~l~l~s~~~~~~l~~~l~~~L~~~gv~v~~~~~a~~~L~i~~~~~~rr~lSv~~~grv~EYeL~~~v~~~v~~~~   90 (145)
T pfam04390        11 PLALKTLYLSSSDPYSELTRELRRQLRLSGVKVVDDAAADPVLRLLSESRSRRTLSLFSQGRVAEYELTYTVNFRVRDPN   90 (145)
T ss_pred             CCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEEEEEEEEEEECCC
T ss_conf             98867799993699987999999999887988826877856999824611079998747972102899999999998699


Q ss_pred             CCCEEEEEEEEEEEEECCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             89587742579998606776157-799999999999999999999999999
Q gi|254780803|r  110 GKNILYENNTDVTSLFDFSDQQF-SQLRSHKSSEEKAIQELSENIYIDIIS  159 (165)
Q Consensus       110 ~~~~i~~~~~~~~~~Y~~~~~~f-~~~~~e~~a~erl~~~lae~I~~~i~~  159 (165)
T Consensus        91 g~~l~~~~~i~~~R~~~~d~~~~Lak~~Ee~~L~~eM~~d~a~qIlrRL~~  141 (145)
T pfam04390        91 GELLIPPTTVEVRRDYLDDPNNALAKSQEEELLRREMRRDAAQQIIRRLAA  141 (145)
T ss_pred             CCCCCCCEEEEEEEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             987138768999998412956762319999999999999999999999874