HHsearch alignment for GI: 254780804 and conserved domain: COG0593
>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair].
Probab=98.36 E-value=0.00017 Score=48.85 Aligned_cols=203 Identities=14% Similarity=0.185 Sum_probs=128.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHC------CCCCCCCEEEEEECCCC
Q ss_conf 384799956996589999999999733566677307762088964189999998717------88888823999847741
Q gi|254780804|r 20 SHFVFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNALEIQKNISTFWNEINS------TSLFSKKKIILIENLST 93 (352)
Q Consensus 20 ~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~~~~~~~~~~~e~~~d~~~l~~~~~t------~slF~~~klIii~~~~~ 93 (352)
T Consensus 112 ~~nplfi~G~~GlGKTHLl~Aign~~~~~-~~~a~v~y~~se~f~~~---~v~a~~~~~~~~Fk~~y-~~dlllIDDiq~ 186 (408)
T COG0593 112 AYNPLFIYGGVGLGKTHLLQAIGNEALAN-GPNARVVYLTSEDFTND---FVKALRDNEMEKFKEKY-SLDLLLIDDIQF 186 (408)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHH-CCCCEEEECCHHHHHHH---HHHHHHHHHHHHHHHHH-CCCEEEECHHHH
T ss_conf 68957998799997899999999999862-99864885048998999---99998850488888764-267355513867
Q ss_pred ---HHHHHHHHHHHHHCCC-CCEEEEEEECCCCCCHH--HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCH
Q ss_conf ---0457898898851056-56079998526543113--56676543112101466442001358898875430256675
Q gi|254780804|r 94 ---EKKVLDCLEEIIIKNI-CNHIIIIKSNEIKKNNT--LRKIAEKFTSVLAISCYPDNKIHLMDLIEESLLIGQKSISK 167 (352)
Q Consensus 94 ---~k~~~~~l~~~~~~~~-~~~~li~~a~~l~k~~k--l~k~~e~~~~~~~v~~~~~~~~~l~~~i~~~~~~~g~~i~~ 167 (352)
T Consensus 187 l~gk~~~qeefFh~FN~l~~~~kqIvltsdr~P~~l~~~~~rL~SR~~~Gl~~~I~~Pd~e~r~aiL~kka~~~~~~i~~ 266 (408)
T COG0593 187 LAGKERTQEEFFHTFNALLENGKQIVLTSDRPPKELNGLEDRLRSRLEWGLVVEIEPPDDETRLAILRKKAEDRGIEIPD 266 (408)
T ss_pred HCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHCCCCHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCH
T ss_conf 56771579999999998885088799970788322110358899898630577527988899999999999865888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCHHHHHHHHHCCCC----CCHHHHHHHHHH
Q ss_conf 67999996200123556899999975103444-3488888775310122----111467888764
Q gi|254780804|r 168 EAKQILLANLGGDRIASRNELQKLSSYCLEDI-LITEQHVKDIICDTHV----LYIEEIINATIQ 227 (352)
Q Consensus 168 ~a~~~L~~~~g~d~~~l~~EleKL~ly~~~~~-~It~~dI~~~v~~~~~----~~if~L~dai~~ 227 (352)
T Consensus 267 ev~~~la~~~~~nvReLegaL~~l~~~a~~~~~~iTi~~v~e~L~~~~~~~~~itie~I~~~Va~ 331 (408)
T COG0593 267 EVLEFLAKRLDRNVRELEGALNRLDAFALFTKRAITIDLVKEILKDLLRAGEKITIEDIQKIVAE 331 (408)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 99999999700309999999999999998538757699999999986401455899999999998