HHsearch alignment for GI: 254780804 and conserved domain: COG0593

>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair].
Probab=98.36  E-value=0.00017  Score=48.85  Aligned_cols=203  Identities=14%  Similarity=0.185  Sum_probs=128.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHC------CCCCCCCEEEEEECCCC
Q ss_conf             384799956996589999999999733566677307762088964189999998717------88888823999847741
Q gi|254780804|r   20 SHFVFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNALEIQKNISTFWNEINS------TSLFSKKKIILIENLST   93 (352)
Q Consensus        20 ~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~~~~~~~~~~~e~~~d~~~l~~~~~t------~slF~~~klIii~~~~~   93 (352)
T Consensus       112 ~~nplfi~G~~GlGKTHLl~Aign~~~~~-~~~a~v~y~~se~f~~~---~v~a~~~~~~~~Fk~~y-~~dlllIDDiq~  186 (408)
T COG0593         112 AYNPLFIYGGVGLGKTHLLQAIGNEALAN-GPNARVVYLTSEDFTND---FVKALRDNEMEKFKEKY-SLDLLLIDDIQF  186 (408)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHHHHH-CCCCEEEECCHHHHHHH---HHHHHHHHHHHHHHHHH-CCCEEEECHHHH
T ss_conf             68957998799997899999999999862-99864885048998999---99998850488888764-267355513867


Q ss_pred             ---HHHHHHHHHHHHHCCC-CCEEEEEEECCCCCCHH--HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCH
Q ss_conf             ---0457898898851056-56079998526543113--56676543112101466442001358898875430256675
Q gi|254780804|r   94 ---EKKVLDCLEEIIIKNI-CNHIIIIKSNEIKKNNT--LRKIAEKFTSVLAISCYPDNKIHLMDLIEESLLIGQKSISK  167 (352)
Q Consensus        94 ---~k~~~~~l~~~~~~~~-~~~~li~~a~~l~k~~k--l~k~~e~~~~~~~v~~~~~~~~~l~~~i~~~~~~~g~~i~~  167 (352)
T Consensus       187 l~gk~~~qeefFh~FN~l~~~~kqIvltsdr~P~~l~~~~~rL~SR~~~Gl~~~I~~Pd~e~r~aiL~kka~~~~~~i~~  266 (408)
T COG0593         187 LAGKERTQEEFFHTFNALLENGKQIVLTSDRPPKELNGLEDRLRSRLEWGLVVEIEPPDDETRLAILRKKAEDRGIEIPD  266 (408)
T ss_pred             HCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHCCCCHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCH
T ss_conf             56771579999999998885088799970788322110358899898630577527988899999999999865888887


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCHHHHHHHHHCCCC----CCHHHHHHHHHH
Q ss_conf             67999996200123556899999975103444-3488888775310122----111467888764
Q gi|254780804|r  168 EAKQILLANLGGDRIASRNELQKLSSYCLEDI-LITEQHVKDIICDTHV----LYIEEIINATIQ  227 (352)
Q Consensus       168 ~a~~~L~~~~g~d~~~l~~EleKL~ly~~~~~-~It~~dI~~~v~~~~~----~~if~L~dai~~  227 (352)
T Consensus       267 ev~~~la~~~~~nvReLegaL~~l~~~a~~~~~~iTi~~v~e~L~~~~~~~~~itie~I~~~Va~  331 (408)
T COG0593         267 EVLEFLAKRLDRNVRELEGALNRLDAFALFTKRAITIDLVKEILKDLLRAGEKITIEDIQKIVAE  331 (408)
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf             99999999700309999999999999998538757699999999986401455899999999998