HHsearch alignment for GI: 254780804 and conserved domain: KOG0991

>KOG0991 consensus.
Probab=98.55  E-value=1.2e-05  Score=56.44  Aligned_cols=238  Identities=13%  Similarity=0.147  Sum_probs=163.7

Q ss_pred             HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHC----CCCC--CCCE
Q ss_conf             532100101384799956996589999999999733566677307762088964189999998717----8888--8823
Q gi|254780804|r   11 QKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNALEIQKNISTFWNEINS----TSLF--SKKK   84 (352)
Q Consensus        11 ~~~~~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~~~~~~~~~~~e~~~d~~~l~~~~~t----~slF--~~~k   84 (352)
T Consensus        40 ~via~~gnmP~--liisGpPG~GKTTsi~~LAr~LLG~~~ke-~vLELNASde-RGIDvVRn~IK~FAQ~kv~lp~grhK  115 (333)
T KOG0991          40 SVIAKEGNMPN--LIISGPPGTGKTTSILCLARELLGDSYKE-AVLELNASDE-RGIDVVRNKIKMFAQKKVTLPPGRHK  115 (333)
T ss_pred             HHHHHCCCCCC--EEEECCCCCCHHHHHHHHHHHHHCHHHHH-HHHHCCCCCC-CCCHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf             99997289986--67527999861648999999983806665-7632057655-46089999999998720348998524


Q ss_pred             EEEEECCCCH-HHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHH-HHHHHHCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             9998477410-457898898851056560799985265431135667654-31121014664420013588988754302
Q gi|254780804|r   85 IILIENLSTE-KKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEK-FTSVLAISCYPDNKIHLMDLIEESLLIGQ  162 (352)
Q Consensus        85 lIii~~~~~~-k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~-~~~~~~v~~~~~~~~~l~~~i~~~~~~~g  162 (352)
T Consensus       116 IiILDEADSMT~gAQQAlRRtMEiyS~ttRFalaCN~------s~KIiEPIQSRCAiLRysklsd~qiL~Rl~~v~k~Ek  189 (333)
T KOG0991         116 IIILDEADSMTAGAQQALRRTMEIYSNTTRFALACNQ------SEKIIEPIQSRCAILRYSKLSDQQILKRLLEVAKAEK  189 (333)
T ss_pred             EEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCC------HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
T ss_conf             8996152202068999999999997063200000154------2132226773457653222678999999999998707


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             56675679999962001235568999999751034443488888775310122111467888764102369999999853
Q gi|254780804|r  163 KSISKEAKQILLANLGGDRIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEIINATIQGKIYNAIMLADFFLA  242 (352)
Q Consensus       163 ~~i~~~a~~~L~~~~g~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~~~~~~~if~L~dai~~~~~~~a~~~l~~l~~  242 (352)
T Consensus       190 v~yt~dgLeaiifta~GDMRQalNnLQst~---~g~g~Vn~enVfKv~d~PhP~~v~~ml~~~~~~~~~~A~~il~~lw~  266 (333)
T KOG0991         190 VNYTDDGLEAIIFTAQGDMRQALNNLQSTV---NGFGLVNQENVFKVCDEPHPLLVKKMLQACLKRNIDEALKILAELWK  266 (333)
T ss_pred             CCCCCCHHHHHHHHCCCHHHHHHHHHHHHH---CCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             887711477855441661999999999874---05452463231000699985999999999986129999999999997


Q ss_pred             HHCCCHHHHHHHHHHHHHH
Q ss_conf             1100014589999999999
Q gi|254780804|r  243 SKMPSHALLHGFLQKFQLL  261 (352)
Q Consensus       243 ~g~~~~~il~~L~~~f~~L  261 (352)
T Consensus       267 lgysp~Dii~~~FRv~K~~  285 (333)
T KOG0991         267 LGYSPEDIITTLFRVVKNM  285 (333)
T ss_pred             CCCCHHHHHHHHHHHHHHC
T ss_conf             4898899999999999842