HHsearch alignment for GI: 254780804 and conserved domain: PRK05642

>PRK05642 DNA replication initiation factor; Validated.
Probab=98.49  E-value=2.6e-05  Score=54.20  Aligned_cols=182  Identities=11%  Similarity=0.100  Sum_probs=117.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCC---HHHH
Q ss_conf             8479995699658999999999973356667730776208896418999999871788888823999847741---0457
Q gi|254780804|r   21 HFVFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNALEIQKNISTFWNEINSTSLFSKKKIILIENLST---EKKV   97 (352)
Q Consensus        21 ~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~~~~~~~~~~~e~~~d~~~l~~~~~t~slF~~~klIii~~~~~---~k~~   97 (352)
T Consensus        45 ~~~l~i~G~~G~GKTHLL~A~~~~~~~~~---~~~~yl~~~~~~~~~~~~~~~l------~~~d~l~IDDi~~i~g~~~~  115 (234)
T PRK05642         45 ESLIYLWGKDGVGRSHLLQAACLRFEQRG---EPAVYLPLAELLDRGPELLDNL------EQYELVCIDDLDVIAGKADW  115 (234)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHCC---CCEEEEEHHHHHHHHHHHHHHH------HHCCEEEEECHHHHCCCHHH
T ss_conf             88389988999988999999999998079---9679978999875449998624------22798989364554688599


Q ss_pred             HHHHHHHHHCC-CCCEEEEEEECCCCCCHH--HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf             89889885105-656079998526543113--566765431121014664420013588988754302566756799999
Q gi|254780804|r   98 LDCLEEIIIKN-ICNHIIIIKSNEIKKNNT--LRKIAEKFTSVLAISCYPDNKIHLMDLIEESLLIGQKSISKEAKQILL  174 (352)
Q Consensus        98 ~~~l~~~~~~~-~~~~~li~~a~~l~k~~k--l~k~~e~~~~~~~v~~~~~~~~~l~~~i~~~~~~~g~~i~~~a~~~L~  174 (352)
T Consensus       116 e~~lF~l~N~~~~~~~~llits~~~P~~l~~~l~DL~SRl~~~~~~~i~~l~d~~~~~iL~~~a~~rgi~l~~~v~~yl~  195 (234)
T PRK05642        116 EEALFHLFNRLRDSGRRLLLAASKSPRELPVKLPDLKSRLTLALVFQMRGLSDEDKLRALQLRASRRGLHLTDEVGHFIL  195 (234)
T ss_pred             HHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf             99999999999983995999578795552300167999995781275148998999999999977546899989999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCC-CCCCCCHHHHHHHHH
Q ss_conf             6200123556899999975103-444348888877531
Q gi|254780804|r  175 ANLGGDRIASRNELQKLSSYCL-EDILITEQHVKDIIC  211 (352)
Q Consensus       175 ~~~g~d~~~l~~EleKL~ly~~-~~~~It~~dI~~~v~  211 (352)
T Consensus       196 ~r~~R~~~~L~~~l~~Ld~~sl~~kr~iTiplvk~vLg  233 (234)
T PRK05642        196 TRGTRSMSALFDLLERLDQASLQAQRKLTIPFLKETLG  233 (234)
T ss_pred             HHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC
T ss_conf             97358899999999999999998389999999999838