HHsearch alignment for GI: 254780804 and conserved domain: PRK05818
>PRK05818 DNA polymerase III subunit delta'; Validated.
Probab=98.37 E-value=4.6e-05 Score=52.55 Aligned_cols=181 Identities=15% Similarity=0.094 Sum_probs=118.1
Q ss_pred HHHHHHHHHCCCCCC-CCEEEEEECCCC-HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 999999871788888-823999847741-045789889885105656079998526543113566765431121014664
Q gi|254780804|r 67 ISTFWNEINSTSLFS-KKKIILIENLST-EKKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISCYP 144 (352)
Q Consensus 67 ~~~l~~~~~t~slF~-~~klIii~~~~~-~k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~~~ 144 (352)
T Consensus 73 ir~li~~l~~~s~e~~g~KV~II~~Ae~Mt~~AANALLKtLEEPp~nt~fIL~t~~~~~L---LPTI-rS-RC~~~~~~~ 147 (262)
T PRK05818 73 ALSIINKLNRPSVESNGKKIYIIYGIEKLNKQSANSLLKLIEEPPKNTYGIFTTRNENNI---LNTI-LS-RCVQYVVLS 147 (262)
T ss_pred HHHHHHHHHHCCCCCCCCEEEEECCHHHHCHHHHHHHHHHHCCCCCCEEEEEEECCHHHC---CCHH-HH-HCCCCCCCC
T ss_conf 999999982114002884899987778749999999998612898783899973881437---3088-87-701446664
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 4200135889887543025667567999996200-123556899999975103444348888877531012211146788
Q gi|254780804|r 145 DNKIHLMDLIEESLLIGQKSISKEAKQILLANLG-GDRIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEIIN 223 (352)
Q Consensus 145 ~~~~~l~~~i~~~~~~~g~~i~~~a~~~L~~~~g-~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~~~~~~~if~L~d 223 (352)
T Consensus 148 ~~~~~~~~~~~~~~~~~~i~~~~~s~de~~~~~~~gs~~~~l~il~~~i~--~~n~~~~~~~~~~l~~~i~~~~i~~ll~ 225 (262)
T PRK05818 148 KEKKVPFKVESNDRYFQYILLSFYSVDEQLQAYNNGSFSKLKNIIETLIN--KKNKLIQIHKAWILFKTFSYYEIAQLLN 225 (262)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH--CCCCCEEHHHHHHHHHCCCHHHHHHHHH
T ss_conf 34667888874088898764101107999988616768889999999987--5688433999999983135999999998
Q ss_pred HHH---HHHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 876---4102369999999853110001458999
Q gi|254780804|r 224 ATI---QGKIYNAIMLADFFLASKMPSHALLHGF 254 (352)
Q Consensus 224 ai~---~~~~~~a~~~l~~l~~~g~~~~~il~~L 254 (352)
T Consensus 226 ~~~~~~d~~~k~~~~~~~~~~~~n~~~~~l~~~~ 259 (262)
T PRK05818 226 LLIPTVDPEKKSKLYNLLSNLKYNLPKTALFANI 259 (262)
T ss_pred HHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 7312668522688998998774497689999997