HHsearch alignment for GI: 254780804 and conserved domain: PRK06305
>PRK06305 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.92 E-value=4.5e-21 Score=158.62 Aligned_cols=302 Identities=12% Similarity=0.084 Sum_probs=240.7
Q ss_pred HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC-------------------CCCEEEEEEHHHH--HCCHHH
Q ss_conf 5321001013847999569965899999999997335666-------------------7730776208896--418999
Q gi|254780804|r 11 QKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYH-------------------DPFSLVVLNALEI--QKNIST 69 (352)
Q Consensus 11 ~~~~~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~-------------------~~~~~~~~~~~e~--~~d~~~ 69 (352)
T Consensus 30 ~nai~~~ri~H-AyLF~GprGtGKTT~ArilAkaLnC~~~~~~~~pCg~C~~C~~I~~g~~~DViEiDaAs~~gVddIRe 108 (462)
T PRK06305 30 KNALRFNRAAH-AYLFSGIRGTGKTTLARIFAKALNCQNPTEDQEPCNQCAICKEISSGTSLDVIEIDGASHRGIEDIRQ 108 (462)
T ss_pred HHHHHCCCCCC-EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCHHHHHH
T ss_conf 99998499762-34303899859999999999996799998888988766888998638999868643553446689999
Q ss_pred HHHHHHCCCCCCCCEEEEEECCCC-HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf 999871788888823999847741-0457898898851056560799985265431135667654311210146644200
Q gi|254780804|r 70 FWNEINSTSLFSKKKIILIENLST-EKKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISCYPDNKI 148 (352)
Q Consensus 70 l~~~~~t~slF~~~klIii~~~~~-~k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~~~~~~~ 148 (352)
T Consensus 109 l~e~v~~~P~~~~yKVyIIDEvhmLs~~AfNALLKtLEEPP~~v~FILaTTe~~KI---p~TI--lSRCQrf~F~~i~~~ 183 (462)
T PRK06305 109 INETVLFTPSKSQYKIYIIDEVHMLTKEAFNSLLKTLEEPPQHVKFFLATTEIHKI---PGTI--LSRCQKMHLKRIPEE 183 (462)
T ss_pred HHHHHCCCCCCCCEEEEEEECHHHCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHC---CHHH--HHHHHEEECCCCCHH
T ss_conf 99771008867750599981521179999999999861898774999981881428---5478--765402332579999
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 13588988754302566756799999620012355689999997510344434888887753101221114678887641
Q gi|254780804|r 149 HLMDLIEESLLIGQKSISKEAKQILLANLGGDRIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEIINATIQG 228 (352)
Q Consensus 149 ~l~~~i~~~~~~~g~~i~~~a~~~L~~~~g~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~~~~~~~if~L~dai~~~ 228 (352)
T Consensus 184 ~I~~~L~~I~~~E~i~~e~~AL~lIA~~a~GsmRDAlslLDQ~i~~~~--~~it~~~V~~~lG~v~~~~l~~L~~ai~~~ 261 (462)
T PRK06305 184 TIIDKLALIAQQDGIETSREALLPIARAAQGSLRDAESLYDYVVGLFP--KSLSPDTVAKALGLLSQDSLYTLAEAITTQ 261 (462)
T ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC--CCCCHHHHHHHHCCCCHHHHHHHHHHHHCC
T ss_conf 999999999998399859999999999858958789999999998479--986899999986899889999999999838
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 02369999999853110001458999999999999999830256898999986089999768999999986499899999
Q gi|254780804|r 229 KIYNAIMLADFFLASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLRIWNKNLVRE 308 (352)
Q Consensus 229 ~~~~a~~~l~~l~~~g~~~~~il~~L~~~f~~L~~~~~~~~~~g~~~~~~~~~~~~p~~~~~k~~~~~q~~~~s~~~l~~ 308 (352)
T Consensus 262 d~~~~l~~~~~i~~~G~d~~~~l~dL~~~~r~ll~~~-----~-------------------~~~~~~~a~~~~~e~l~~ 317 (462)
T PRK06305 262 NYAQALGPVTDALNSGVAPAHFLHDLTLFFRSLLLKQ-----E-------------------NSTLSSFASKYSSEQLLE 317 (462)
T ss_pred CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC-----C-------------------HHHHHHHHHHCCHHHHHH
T ss_conf 9999999999999849999999999999999999862-----6-------------------799999987479999999
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999999953289998999999999999963102
Q gi|254780804|r 309 TLHKIDHRIHLARKKKYLEKNIIFQTILYIAQTACKN 345 (352)
Q Consensus 309 ~l~~L~~~d~~~K~~~~~~~~il~~~ll~l~~~a~~~ 345 (352)
T Consensus 318 ~~~il~~~~~~l~~-a~~~r~~lEm~llrl~~~~~~~ 353 (462)
T PRK06305 318 IIDFLGESAKHLQL-TIFEKTFLETVIIHLIRIYQRP 353 (462)
T ss_pred HHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999525-9974799999999999827799