HHsearch alignment for GI: 254780804 and conserved domain: PRK06647

>PRK06647 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.92  E-value=2.4e-21  Score=160.42  Aligned_cols=313  Identities=12%  Similarity=0.149  Sum_probs=247.3

Q ss_pred             HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCC------------------CCCCCEEEEEEHHH--HHCCHH
Q ss_conf             8753210010138479995699658999999999973356------------------66773077620889--641899
Q gi|254780804|r    9 FIQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISIT------------------YHDPFSLVVLNALE--IQKNIS   68 (352)
Q Consensus         9 ~~~~~~~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~------------------~~~~~~~~~~~~~e--~~~d~~   68 (352)
T Consensus        27 ~L~nai~~~rl~H-AyLFsGprG~GKTt~ArilAk~LnC~~~~~~~PCg~C~sC~~i~~g~~~DviEidaasn~~VddIR  105 (560)
T PRK06647         27 TLKHSIEKNKIAN-AYIFSGPRGVGKTSSARAFARCLNCVNGPTIMPCGECFSCKSIDNDSSLDVIEIDGASNTSVQDVR  105 (560)
T ss_pred             HHHHHHHCCCCCC-EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCHHHHH
T ss_conf             9999997499774-366328998789999999999965999999888878878888745999875764364548889999


Q ss_pred             HHHHHHHCCCCCCCCEEEEEECCCC-HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             9999871788888823999847741-045789889885105656079998526543113566765431121014664420
Q gi|254780804|r   69 TFWNEINSTSLFSKKKIILIENLST-EKKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISCYPDNK  147 (352)
Q Consensus        69 ~l~~~~~t~slF~~~klIii~~~~~-~k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~~~~~~  147 (352)
T Consensus       106 ~l~e~v~~~P~~~~yKV~IIDEahmLt~~A~NALLKtLEEPP~~~~FILaTte~~K---I~~TI--~SRCQ~f~Fk~i~~  180 (560)
T PRK06647        106 QIKEEIMFPPASSRYRVYIIDEVHMLSNSAFNALLKTIEEPPPYIVFIFATTEVHK---LPATI--KSRCQHFNFRLLSL  180 (560)
T ss_pred             HHHHHHCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCHHH---CHHHH--HHHHEEEECCCCCH
T ss_conf             99998632876687069996465655999999999986348875599997799476---84899--96510410555999


Q ss_pred             HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf             01358898875430256675679999962001235568999999751034443488888775310122111467888764
Q gi|254780804|r  148 IHLMDLIEESLLIGQKSISKEAKQILLANLGGDRIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEIINATIQ  227 (352)
Q Consensus       148 ~~l~~~i~~~~~~~g~~i~~~a~~~L~~~~g~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~~~~~~~if~L~dai~~  227 (352)
T Consensus       181 ~~I~~~L~~I~~~E~i~~e~~AL~lIa~~a~Gs~RDalslldq~i~~~--~~~i~~~~v~~~lG~~~~~~~~~l~~~i~~  258 (560)
T PRK06647        181 EKIYEMLKKVCLEDDIKYEDEALKWIAYKSGGSVRDAYTLFDQIVSFS--NSDITLEQIRSKMGLTSDEFLEKLSSSILN  258 (560)
T ss_pred             HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCC--CCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             999999999998679887999999999977895888999999999607--997789999998689888999999999994


Q ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH
Q ss_conf             10236999999985311000145899999999999999983025689899998608999976899999998649989999
Q gi|254780804|r  228 GKIYNAIMLADFFLASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLRIWNKNLVR  307 (352)
Q Consensus       228 ~~~~~a~~~l~~l~~~g~~~~~il~~L~~~f~~L~~~~~~~~~~g~~~~~~~~~~~~p~~~~~k~~~~~q~~~~s~~~l~  307 (352)
T Consensus       259 ~d~~~~l~~~~~i~~~G~d~~~fl~~li~~~R~lll~k~~-----~~~~~~~~~--------~~e~i~~~a~~~d~~~l~  325 (560)
T PRK06647        259 KDLKELLCVLDAIFLSGVSVEQFLLDCIEFFRELLFLKLG-----IKNEMFIGI--------KAESLPEKLLEFDLNQIE  325 (560)
T ss_pred             CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC-----CCHHHHCCC--------CHHHHHHHHHHCCHHHHH
T ss_conf             6999999999999980999999999999999999997614-----862433123--------188999999747999999


Q ss_pred             HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999532899989999999999999631
Q gi|254780804|r  308 ETLHKIDHRIHLARKKKYLEKNIIFQTILYIAQTAC  343 (352)
Q Consensus       308 ~~l~~L~~~d~~~K~~~~~~~~il~~~ll~l~~~a~  343 (352)
T Consensus       326 ~~~~il~~~~~dl~~-s~~Pk~~lEm~llRml~l~~  360 (560)
T PRK06647        326 RAISVLLETYRDLQF-SVNPRYELEINFIKILRLKD  360 (560)
T ss_pred             HHHHHHHHHHHHCCC-CCCCHHHHHHHHHHHHHCCC
T ss_conf             999999989985786-89930889999999984678