HHsearch alignment for GI: 254780804 and conserved domain: PRK07003
>PRK07003 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.67 E-value=8.1e-13 Score=103.95 Aligned_cols=303 Identities=11% Similarity=0.076 Sum_probs=222.8
Q ss_pred HHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCC------------------CCCCCEEEEEEHHH--HHCCHHHHHHHH
Q ss_conf 0010138479995699658999999999973356------------------66773077620889--641899999987
Q gi|254780804|r 15 KNLFLSHFVFIFYGSDKGLIFELINQFKKNISIT------------------YHDPFSLVVLNALE--IQKNISTFWNEI 74 (352)
Q Consensus 15 ~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~------------------~~~~~~~~~~~~~e--~~~d~~~l~~~~ 74 (352)
T Consensus 33 ~~~rl~h-aylf~G~rGvGKTt~aRi~Ak~lnC~~~~~~~pcg~C~~C~~i~~g~~~d~iEiDaAS~~~vd~~r~l~~~~ 111 (816)
T PRK07003 33 DGGRLHH-AYLFTGTRGVGKTTLSRIFAKALNCETGVTSQPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERA 111 (816)
T ss_pred HCCCCCC-EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHC
T ss_conf 7098631-475117898888899999999867899999897877555787755887754786355435768999999862
Q ss_pred HCCCCCCCCEEEEEECCCC-HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf 1788888823999847741-045789889885105656079998526543113566765431121014664420013588
Q gi|254780804|r 75 NSTSLFSKKKIILIENLST-EKKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISCYPDNKIHLMDL 153 (352)
Q Consensus 75 ~t~slF~~~klIii~~~~~-~k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~~~~~~~~l~~~ 153 (352)
T Consensus 112 ~y~p~~~r~KvyiiDEvHmls~~afnalLKtlEepP~hv~FilaTTd~~k~---p~ti--lSRc~~f~l~~~~~~~i~~~ 186 (816)
T PRK07003 112 VYAPVDARFKVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKI---PVTV--LSRCLQFNLKQMPAGHIVSH 186 (816)
T ss_pred CCCCCCCCEEEEEEECHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHC---CHHH--HHHHHHCCCCCCCHHHHHHH
T ss_conf 247866744799984154339999999998403798664899955880115---2889--87776522367999999999
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 98875430256675679999962001235568999999751034443488888775310122111467888764102369
Q gi|254780804|r 154 IEESLLIGQKSISKEAKQILLANLGGDRIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEIINATIQGKIYNA 233 (352)
Q Consensus 154 i~~~~~~~g~~i~~~a~~~L~~~~g~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~~~~~~~if~L~dai~~~~~~~a 233 (352)
T Consensus 187 l~~i~~~E~i~~e~~al~lia~~a~GsmRDalsl~dQaia~~--~g~~~~~~v~~mLG~~d~~~~~~ll~al~~~d~~~~ 264 (816)
T PRK07003 187 LERILGEERIAFEPQALRLLARAAQGSMRDALSLTDQAIAYS--ANEVTETAVSGMLGALDQTYMVRLLDALAAADGPEI 264 (816)
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHH
T ss_conf 999999829977999999999976773788885999999846--997379999998588877899999999995589999
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 99999985311000145899999999999999983025689899998608999976899999998649989999999999
Q gi|254780804|r 234 IMLADFFLASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLRIWNKNLVRETLHKI 313 (352)
Q Consensus 234 ~~~l~~l~~~g~~~~~il~~L~~~f~~L~~~~~~~~~~g~~~~~~~~~~~~p~~~~~k~~~~~q~~~~s~~~l~~~l~~L 313 (352)
T Consensus 265 ~~~~~~~~~~~~~~~~~l~~l~~~lh~ia~~q~~p~-------~~~~------~~~~~~~~~~la~~~~~e~~Ql~Yqi~ 331 (816)
T PRK07003 265 LAIADEMSLRSLSFSTALQDLASLLHRIAWAQFAPG-------SVLD------EWPEAADLRRFAELLSPEQVQLFYQIA 331 (816)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCH-------HCCC------CCCCHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 999999998688999999999999999999984610-------0023------462189999999728999999999999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 99999953289998999999999999
Q gi|254780804|r 314 DHRIHLARKKKYLEKNIIFQTILYIA 339 (352)
Q Consensus 314 ~~~d~~~K~~~~~~~~il~~~ll~l~ 339 (352)
T Consensus 332 l~gr~dl~~-ap~~~~g~em~llRml 356 (816)
T PRK07003 332 TVGRAELGL-APDEYAGFTMTLLRML 356 (816)
T ss_pred HHCHHHCCC-CCCCHHHHHHHHHHHH
T ss_conf 703443134-9881130999999998