HHsearch alignment for GI: 254780804 and conserved domain: PRK07132
>PRK07132 DNA polymerase III subunit delta'; Validated.
Probab=98.05 E-value=0.0005 Score=45.69 Aligned_cols=161 Identities=16% Similarity=0.209 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC-------CCCEEEEEEHHHHH---CCHHHHHHHHH
Q ss_conf 378875321001013847999569965899999999997335666-------77307762088964---18999999871
Q gi|254780804|r 6 SHKFIQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYH-------DPFSLVVLNALEIQ---KNISTFWNEIN 75 (352)
Q Consensus 6 ~~~~~~~~~~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~-------~~~~~~~~~~~e~~---~d~~~l~~~~~ 75 (352)
T Consensus 6 iv~~L~nai~~~klsH-AYLF~G~~G~Gk~~~a~~~a~~l~~~~~~~~~~~~~~~~~~~id~~~~~i~~~~i~~~i~~~~ 84 (303)
T PRK07132 6 IIKSLDNLAKQNKISH-SFLLKSNYNNDLDESILYFLNKFNNLQSLNLNLEELPYNIFLFDIFDEDLSKEEFLSAIEKFS 84 (303)
T ss_pred HHHHHHHHHHCCCCCE-EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 9999999998499761-688678998679999999999972998788875456532304133222001688999999997
Q ss_pred CCCCCCC-CEEEEEECCCC-HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf 7888888-23999847741-045789889885105656079998526543113566765431121014664420013588
Q gi|254780804|r 76 STSLFSK-KKIILIENLST-EKKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISCYPDNKIHLMDL 153 (352)
Q Consensus 76 t~slF~~-~klIii~~~~~-~k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~~~~~~~~l~~~ 153 (352)
T Consensus 85 ~~~~~~~~~Kv~IIdea~~lt~~A~NaLLKtLEEPp~~~~fil~t~~~~~i---l~TI--~SRCq~~~f~~~~~~~i~~~ 159 (303)
T PRK07132 85 FSSFVSNQKKILIIKNIEKTSNSSLNALLKTIEEPSKNTYFLLTTKNINKV---IPTI--VSRCQVINVKEPDQQKILAK 159 (303)
T ss_pred HCCCCCCCEEEEEEECHHHCCHHHHHHHHHHCCCCCCCEEEEEEECCHHHC---CHHH--HHCCEEEECCCCCHHHHHHH
T ss_conf 366556870699981655339999999998703898684899972882438---3778--63665663788999999999
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 9887543025667567999996200
Q gi|254780804|r 154 IEESLLIGQKSISKEAKQILLANLG 178 (352)
Q Consensus 154 i~~~~~~~g~~i~~~a~~~L~~~~g 178 (352)
T Consensus 160 l~e~------~~~~e~~~~~a~~~~ 178 (303)
T PRK07132 160 LLSQ------NKEKEFEKFYAYIFK 178 (303)
T ss_pred HHHC------CCCCHHHHHHHHHHC
T ss_conf 9864------775278999999974