HHsearch alignment for GI: 254780804 and conserved domain: PRK07270
>PRK07270 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.90 E-value=3.6e-20 Score=152.61 Aligned_cols=310 Identities=12% Similarity=0.101 Sum_probs=237.0
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCC---CCC---------------CEEEEEEHHH--HHCCH
Q ss_conf 887532100101384799956996589999999999733566---677---------------3077620889--64189
Q gi|254780804|r 8 KFIQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITY---HDP---------------FSLVVLNALE--IQKNI 67 (352)
Q Consensus 8 ~~~~~~~~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~---~~~---------------~~~~~~~~~e--~~~d~ 67 (352)
T Consensus 25 ~~L~nal~~~ri~H-AyLF~GP~GtGKts~ArifAkaLnC~~~~~~~pC~~C~~C~~i~~g~~~DviEidaas~~gVd~I 103 (557)
T PRK07270 25 TTLKQAVESGKISH-AYLFSGPRGTGKTSAAKIFAKAMNCPNQVDGEPCNNCDICRDITNGSLEDVIEIDAASNNGVDEI 103 (557)
T ss_pred HHHHHHHHCCCCCE-EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCHHHH
T ss_conf 99999998599540-44210899868999999999995799989999888777999987589997487347776788999
Q ss_pred HHHHHHHHCCCCCCCCEEEEEECCCC-HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999871788888823999847741-04578988988510565607999852654311356676543112101466442
Q gi|254780804|r 68 STFWNEINSTSLFSKKKIILIENLST-EKKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISCYPDN 146 (352)
Q Consensus 68 ~~l~~~~~t~slF~~~klIii~~~~~-~k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~~~~~ 146 (352)
T Consensus 104 Rei~~~~~~~P~~~~yKV~IIDEah~Ls~~A~NALLKtLEEPP~~~vFIL~Ttep~kI---l~TI--~SRCQrf~F~~i~ 178 (557)
T PRK07270 104 RDIRDKSTYAPSRATYKVYIIDEVHMLSTGAFNALLKTLEEPTENVVFILATTELHKI---PATI--LSRVQRFEFKSIK 178 (557)
T ss_pred HHHHHHHCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHC---CHHH--HHHHHHCCCCCCC
T ss_conf 9999984238777883899971445349999998999852899876999984994759---2888--7430001088899
Q ss_pred CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 00135889887543025667567999996200123556899999975103444348888877531012211146788876
Q gi|254780804|r 147 KIHLMDLIEESLLIGQKSISKEAKQILLANLGGDRIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEIINATI 226 (352)
Q Consensus 147 ~~~l~~~i~~~~~~~g~~i~~~a~~~L~~~~g~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~~~~~~~if~L~dai~ 226 (352)
T Consensus 179 ~~~i~~~L~~I~~~E~i~~~~~aL~~Ia~~a~G~mRdAlsiLdQ~~s~~~~-~~it~~~v~~~~G~~~~~~l~~l~~~~~ 257 (557)
T PRK07270 179 TKAIREHLAWILDKEGISFEVEALNLIARRAEGGMRDALSILDQALSLSQD-NQVTIAIAEEITGSISLLALDDYVAALS 257 (557)
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC-CCCCHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 999999999999983998699999999997799687899999999971799-9767999999968998999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHH
Q ss_conf 41023699999998531100014589999999999999998302568989999860899997689999999864998999
Q gi|254780804|r 227 QGKIYNAIMLADFFLASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLRIWNKNLV 306 (352)
Q Consensus 227 ~~~~~~a~~~l~~l~~~g~~~~~il~~L~~~f~~L~~~~~~~~~~g~~~~~~~~~~~~p~~~~~k~~~~~q~~~~s~~~l 306 (352)
T Consensus 258 ~~d~~~~l~~~~~~~~~G~d~~~~~~dl~~~~Rdll~~k~~----~~~~-~----------~---~~~~~~~~~~~~~~l 319 (557)
T PRK07270 258 QQDATKALAALETIFDSGKSMSRFATDLLTYLRDLLIVKAG----GENT-H----------H---SAVFDENLSLSQDRI 319 (557)
T ss_pred CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC----CCHH-H----------H---HHHHHHHHCCCHHHH
T ss_conf 17999999999999986999999999999999976741227----7455-5----------5---676788870699999
Q ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999532899989999999999999631
Q gi|254780804|r 307 RETLHKIDHRIHLARKKKYLEKNIIFQTILYIAQTAC 343 (352)
Q Consensus 307 ~~~l~~L~~~d~~~K~~~~~~~~il~~~ll~l~~~a~ 343 (352)
T Consensus 320 ~~~i~~l~~~~~~~~~~-~~p~i~lE~~~~kl~~~~~ 355 (557)
T PRK07270 320 FQMIDVVTSSLPEIKKG-THPKIYAEMMTIRLAEIEQ 355 (557)
T ss_pred HHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHCCCC
T ss_conf 99999999999997514-7812999999999853456