HHsearch alignment for GI: 254780804 and conserved domain: PRK07276
>PRK07276 DNA polymerase III subunit delta'; Validated.
Probab=98.42 E-value=0.0002 Score=48.34 Aligned_cols=157 Identities=15% Similarity=0.183 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCC---CCCC---------------EEEEEE--HHHH-HC
Q ss_conf 7887532100101384799956996589999999999733566---6773---------------077620--8896-41
Q gi|254780804|r 7 HKFIQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITY---HDPF---------------SLVVLN--ALEI-QK 65 (352)
Q Consensus 7 ~~~~~~~~~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~---~~~~---------------~~~~~~--~~e~-~~ 65 (352)
T Consensus 11 ~~~l~~~i~~~rl~HA-yLf~G-~~Gk-~~~A~~~A~~l~C~~~~~~~pCg~C~~C~~i~~~~hpDv~~i~~~~~~I~vd 87 (290)
T PRK07276 11 FQRFQTILEQDRLNHA-YLFSG-DFAS-FEMALFLAQSLFCEQKEDVLPCGHCRSCRLIEQGDFSDVTVIEPQGQVIKTD 87 (290)
T ss_pred HHHHHHHHHCCCCCEE-EECCC-CCCH-HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCCCHH
T ss_conf 9999999984996505-42169-8687-9999999999818999998989889999998769998713771677757688
Q ss_pred CHHHHHHHHHCCCCCCCCEEEEEECCCCH-HHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 89999998717888888239998477410-45789889885105656079998526543113566765431121014664
Q gi|254780804|r 66 NISTFWNEINSTSLFSKKKIILIENLSTE-KKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISCYP 144 (352)
Q Consensus 66 d~~~l~~~~~t~slF~~~klIii~~~~~~-k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~~~ 144 (352)
T Consensus 88 ~IR~l~~~~~~~~~~g~~KV~II~~Ad~mt~~AaNaLLK~LEEPp~~t~~iLlt~~~~~l---LpTI--~SRCQ~i~f-p 161 (290)
T PRK07276 88 TIRELTANFSQSGYEGKRQVFIIKDADKMHVNAANSLLKVIEEPQSEIYIFLLTNDENKV---LPTI--KSRTQIFHF-P 161 (290)
T ss_pred HHHHHHHHHHHCCCCCCEEEEEECCHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCHHHC---CHHH--HHCCCCCCC-C
T ss_conf 999999998445613782799977656529999999999703898883799887992549---3788--736601028-9
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 4200135889887543025667567999996200
Q gi|254780804|r 145 DNKIHLMDLIEESLLIGQKSISKEAKQILLANLG 178 (352)
Q Consensus 145 ~~~~~l~~~i~~~~~~~g~~i~~~a~~~L~~~~g 178 (352)
T Consensus 162 ~~~~----~l~~~l~~~g--i~~~~a~~la~~~~ 189 (290)
T PRK07276 162 KNEA----YLYQLLEEKG--LLKTQAKLLAKLAQ 189 (290)
T ss_pred CCHH----HHHHHHHHCC--CCHHHHHHHHHHHC
T ss_conf 9679----9999999869--98679999999965