HHsearch alignment for GI: 254780804 and conserved domain: PRK07452
>PRK07452 DNA polymerase III subunit delta; Validated.
Probab=100.00 E-value=0 Score=383.60 Aligned_cols=317 Identities=15% Similarity=0.183 Sum_probs=276.8
Q ss_pred CEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCC----CHHHH
Q ss_conf 47999569965899999999997335666773077620889641899999987178888882399984774----10457
Q gi|254780804|r 22 FVFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNALEIQKNISTFWNEINSTSLFSKKKIILIENLS----TEKKV 97 (352)
Q Consensus 22 ~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~~~~~~~~~~~e~~~d~~~l~~~~~t~slF~~~klIii~~~~----~~k~~ 97 (352)
T Consensus 2 PvYll~GeE~~li~~~~~~i~~~~~~~~~~~fn~~~~dg~e~-~~~~~~l~~a~T~Pf~~~~RlVvvk~a~~~~~~~~~~ 80 (326)
T PRK07452 2 PIYLYWGEDDFALNQAIEKLIDQVVDPEWKSFNYSRLDGDDA-EQAIQALNEAMTPPFGSGGRLVWLKNSPLCQGCSEEL 80 (326)
T ss_pred CEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC-CHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHH
T ss_conf 889998382899999999999960895446762378737554-2599999986278877885599983661002487889
Q ss_pred HHHHHHHHHCCCCCEEEEEEE-CCCCCCHHHHHHHHHHHHHHHCC-CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 898898851056560799985-26543113566765431121014-6644200135889887543025667567999996
Q gi|254780804|r 98 LDCLEEIIIKNICNHIIIIKS-NEIKKNNTLRKIAEKFTSVLAIS-CYPDNKIHLMDLIEESLLIGQKSISKEAKQILLA 175 (352)
Q Consensus 98 ~~~l~~~~~~~~~~~~li~~a-~~l~k~~kl~k~~e~~~~~~~v~-~~~~~~~~l~~~i~~~~~~~g~~i~~~a~~~L~~ 175 (352)
T Consensus 81 ~~~l~~~l~~~p~~t~lv~~~~~k~D~R~K~~K~l~k~~~~~ef~~~~~~~~~~l~~wi~~~~~~~g~~i~~~a~~~Lv~ 160 (326)
T PRK07452 81 LAELERTLPLIPENTHLLLTNTKKPDGRLKSTKLLQKLAEEKEFSLPPPWDGEGQKQLVERTAQELGVKLTPEAAELLAE 160 (326)
T ss_pred HHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 99999986179997599998467632377878999840113454068865799999999999998699989999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCC-CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 20012355689999997510344-43488888775310122111467888764102369999999853110001458999
Q gi|254780804|r 176 NLGGDRIASRNELQKLSSYCLED-ILITEQHVKDIICDTHVLYIEEIINATIQGKIYNAIMLADFFLASKMPSHALLHGF 254 (352)
Q Consensus 176 ~~g~d~~~l~~EleKL~ly~~~~-~~It~~dI~~~v~~~~~~~if~L~dai~~~~~~~a~~~l~~l~~~g~~~~~il~~L 254 (352)
T Consensus 161 ~~G~dl~~l~~EleKL~ly~~~~~~~It~e~V~~lv~-~~~~~iF~L~dAi~~~~~~~Al~~l~~Ll~~ge~pi~Ila~l 239 (326)
T PRK07452 161 AVGNDSRRLYNELEKLALYAENSEKPISAEDVKALVS-NTTQNSLQLADALLQGNTGEALALIDDLLDANEPALRIVATL 239 (326)
T ss_pred HHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC-CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 8684399999999999986289997068999998827-764409999999986899999999999998799889999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 99999999999983025689899998608999976899999998649989999999999999999532899989999999
Q gi|254780804|r 255 LQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLRIWNKNLVRETLHKIDHRIHLARKKKYLEKNIIFQT 334 (352)
Q Consensus 255 ~~~f~~L~~~~~~~~~~g~~~~~~~~~~~~p~~~~~k~~~~~q~~~~s~~~l~~~l~~L~~~d~~~K~~~~~~~~il~~~ 334 (352)
T Consensus 240 ~~q~r~ll~vk~l~~~G~~~~~~ia~~lgi~-~P~r~~~~~~~~~~~s~~~L~~~l~~l~~~D~~iKsG~-~~~~ale~~ 317 (326)
T PRK07452 240 TGQFRTWLWVKLLVESGERDVKVIAKAAGIG-NPKRIYFLRKEVQGLSSQQLLKLLPLLLDLEASLKQGA-NPINAFQDK 317 (326)
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC-CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHH
T ss_conf 9999999999999974897799999982899-82789999999867999999999999999999864799-868999999
Q ss_pred HHHHHHHH
Q ss_conf 99999963
Q gi|254780804|r 335 ILYIAQTA 342 (352)
Q Consensus 335 ll~l~~~a 342 (352)
T Consensus 318 v~~lc~~~ 325 (326)
T PRK07452 318 LIELCQLL 325 (326)
T ss_pred HHHHHHHC
T ss_conf 99996043