HHsearch alignment for GI: 254780804 and conserved domain: PRK08769
>PRK08769 DNA polymerase III subunit delta'; Validated.
Probab=98.59 E-value=7.8e-05 Score=51.03 Aligned_cols=165 Identities=10% Similarity=0.096 Sum_probs=104.9
Q ss_pred HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCC-----------------CCEEEEEEHH----H----H
Q ss_conf 8753210010138479995699658999999999973356667-----------------7307762088----9----6
Q gi|254780804|r 9 FIQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYHD-----------------PFSLVVLNAL----E----I 63 (352)
Q Consensus 9 ~~~~~~~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~-----------------~~~~~~~~~~----e----~ 63 (352)
T Consensus 16 L~~~i~~~-rl~H-A~Lf~Gp~G~GK~~~A~~~A~~llc~~~~~~~~~~~~~~i~~g~HPD~~~i~~~~~~~~~k~k~~I 93 (319)
T PRK08769 16 TVAALDAG-RLGH-GLLICGPEGLGKRAVALALAEHVLASGPDPALAQRTRQLIAAGTHPDLQLVSFIPNRTGDKLRTEI 93 (319)
T ss_pred HHHHHHCC-CCCC-EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCC
T ss_conf 99999769-9420-687589998789999999999983799797654338899966899896877534444543112348
Q ss_pred -HCCHHHHHHHHHCCCCCCCCEEEEEECCCC-HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf -418999999871788888823999847741-045789889885105656079998526543113566765431121014
Q gi|254780804|r 64 -QKNISTFWNEINSTSLFSKKKIILIENLST-EKKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAIS 141 (352)
Q Consensus 64 -~~d~~~l~~~~~t~slF~~~klIii~~~~~-~k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~ 141 (352)
T Consensus 94 ~IdqiR~l~~~~~~~p~~g~~KV~IId~Ad~mn~~AaNalLK~LEEPp~~~~~iL~~~~~~~---ll~TI--~SRCq~~~ 168 (319)
T PRK08769 94 VIEQVREISQKLALTPQYGIAQVVIVDPADAINRSACNALLKTLEEPSPGRYLWLISAQPAR---LPATI--RSRCQRLE 168 (319)
T ss_pred CHHHHHHHHHHHHHCCCCCCCEEEEECCHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCHHH---CCHHH--HHCCEEEC
T ss_conf 69999999999613720279569998066752899999999982279988489998699365---82477--64850111
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 664420013588988754302566756799999620012355689
Q gi|254780804|r 142 CYPDNKIHLMDLIEESLLIGQKSISKEAKQILLANLGGDRIASRN 186 (352)
Q Consensus 142 ~~~~~~~~l~~~i~~~~~~~g~~i~~~a~~~L~~~~g~d~~~l~~ 186 (352)
T Consensus 169 ~~~p~~~~~~~~L~~~----g--~~~~~a~~~l~~a~g~p~~A~~ 207 (319)
T PRK08769 169 FKLPPAHEALAWLLSQ----G--VSERAAQEALDAARGHPGLAAQ 207 (319)
T ss_pred CCCCCHHHHHHHHHHC----C--CCHHHHHHHHHHHCCCHHHHHH
T ss_conf 8996999999999975----9--9918999999982799689999