HHsearch alignment for GI: 254780804 and conserved domain: PRK08853

>PRK08853 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.66  E-value=1.3e-12  Score=102.66  Aligned_cols=301  Identities=10%  Similarity=0.047  Sum_probs=219.9

Q ss_pred             HHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCC------------------CCCCEEEEEEHHH--HHCCHHHHHHHHHC
Q ss_conf             101384799956996589999999999733566------------------6773077620889--64189999998717
Q gi|254780804|r   17 LFLSHFVFIFYGSDKGLIFELINQFKKNISITY------------------HDPFSLVVLNALE--IQKNISTFWNEINS   76 (352)
Q Consensus        17 ~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~------------------~~~~~~~~~~~~e--~~~d~~~l~~~~~t   76 (352)
T Consensus        35 ~rl~h-aylf~G~rGvGKTt~ARi~Ak~lNC~~~~~~~pcg~C~~C~~i~~g~~~d~~EiDaAs~~~vdd~rel~~~~~y  113 (717)
T PRK08853         35 NRLHH-AYLFSGTRGVGKTTIGRLFAKGLNCETGITSTPCGQCATCKEIDEGRFVDLLEIDAASRTKVEDTRELLDNVQY  113 (717)
T ss_pred             CCCCC-EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCC
T ss_conf             99740-57610889888989999999986789999999788870267674478775245405656788999999985554


Q ss_pred             CCCCCCCEEEEEECCCC-HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf             88888823999847741-04578988988510565607999852654311356676543112101466442001358898
Q gi|254780804|r   77 TSLFSKKKIILIENLST-EKKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISCYPDNKIHLMDLIE  155 (352)
Q Consensus        77 ~slF~~~klIii~~~~~-~k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~~~~~~~~l~~~i~  155 (352)
T Consensus       114 ~p~~~~yKvyiiDEvHmls~~afnAlLKtlEEPP~hv~FilaTT~~~ki---p~Ti--lSRc~~f~l~~~~~~~i~~~l~  188 (717)
T PRK08853        114 KPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKL---PVTI--LSRCLQFHLKPISVDQIHQQLD  188 (717)
T ss_pred             CCCCCCEEEEEEECHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHC---CHHH--HHHHHHCCCCCCCHHHHHHHHH
T ss_conf             8877854799983054438999999987603787564899843873437---3889--8765442326899999999999


Q ss_pred             HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             87543025667567999996200123556899999975103444348888877531012211146788876410236999
Q gi|254780804|r  156 ESLLIGQKSISKEAKQILLANLGGDRIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEIINATIQGKIYNAIM  235 (352)
Q Consensus       156 ~~~~~~g~~i~~~a~~~L~~~~g~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~~~~~~~if~L~dai~~~~~~~a~~  235 (352)
T Consensus       189 ~i~~~E~i~~~~~al~~ia~~a~Gs~Rdalsl~dqaia~~--~g~~~~~~v~~mlg~~d~~~~~~ll~al~~~d~~~~~~  266 (717)
T PRK08853        189 FVLDKEQVSAEARALGLIAHAADGSMRDALSLTDQAIALG--NGQVTTDIVSHMLGTLDTDQAIHLLEAISSKQPQTAMD  266 (717)
T ss_pred             HHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHH
T ss_conf             9999759876999999999976883778888999999965--89716999999858887789999999999558999999


Q ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             99998531100014589999999999999998302568989999860899997689999999864998999999999999
Q gi|254780804|r  236 LADFFLASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLRIWNKNLVRETLHKIDH  315 (352)
Q Consensus       236 ~l~~l~~~g~~~~~il~~L~~~f~~L~~~~~~~~~~g~~~~~~~~~~~~p~~~~~k~~~~~q~~~~s~~~l~~~l~~L~~  315 (352)
T Consensus       267 ~~~~~~~~~~~~~~~l~~l~~~lh~ia~~q~~p~--------~~~~~-----~~~~~~i~~la~~~~~e~~Ql~YQi~l~  333 (717)
T PRK08853        267 CIQQLADNGVEWDGLLQQLATQLHRIAMYQALPA--------TLDKA-----QPDAERIELLSKALSPQDVQLYYQIALK  333 (717)
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHH--------HHCCC-----CCCHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             9999998688999999999999999999984814--------21244-----6418999999983899999999999970


Q ss_pred             HHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             999953289998999999999999
Q gi|254780804|r  316 RIHLARKKKYLEKNIIFQTILYIA  339 (352)
Q Consensus       316 ~d~~~K~~~~~~~~il~~~ll~l~  339 (352)
T Consensus       334 gr~dl~~-apd~~~g~eM~lLRml  356 (717)
T PRK08853        334 GRQDLPL-APNGRIGMEMIVLRMM  356 (717)
T ss_pred             CCCCCCC-CCCHHHHHHHHHHHHH
T ss_conf             3011566-9963676999999997