HHsearch alignment of GI: 254780804 and MMDB domain: 1jr3_A_1-177
>1jr3_A (A:1-177) DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli}
Probab=94.17 E-value=0.38 Score=26.20 Aligned_cols=113 Identities=8% Similarity=0.105 Sum_probs=71.3
Q ss_pred HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCC--------------------CCEEEEEEHHHHHCCHHH
Q ss_conf 753210010138479995699658999999999973356667--------------------730776208896418999
Q gi|254780804|r 10 IQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYHD--------------------PFSLVVLNALEIQKNIST 69 (352)
Q Consensus 10 ~~~~~~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~--------------------~~~~~~~~~~e~~~d~~~ 69 (352)
++..-.+....| -+||||+.---+...++.+.+.+..+... .+......+.........
T Consensus 28 l~~~i~~~~~~~-~~Ll~GppG~GKT~~A~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (177)
T 1jr3_A 28 LANGLSLGRIHH-AYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRD 106 (177)
T ss_dssp HHHHHHHTCCCS-EEEEESCTTSSHHHHHHHHHHHHSCTTCSCSSCCSSSHHHHHHHTSCCSSCEEEETTCSCCSSCHHH
T ss_pred HHHHHHCCCCCC-EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCHHCCCHHHHHH
T ss_conf 999998699772-3765799998799999999999678788876877521689999758987279853120188999999
Q ss_pred HHHHHHCCCCCCCCEEEEEECCCCH-HHHHHHHHHHHHCCCCCEEEEEEECCCCC
Q ss_conf 9998717888888239998477410-45789889885105656079998526543
Q gi|254780804|r 70 FWNEINSTSLFSKKKIILIENLSTE-KKVLDCLEEIIIKNICNHIIIIKSNEIKK 123 (352)
Q Consensus 70 l~~~~~t~slF~~~klIii~~~~~~-k~~~~~l~~~~~~~~~~~~li~~a~~l~k 123 (352)
+.+.+...+..+.++++++.++... ......+...++.++.++++|+.+...+.
T Consensus 107 ~~~~~~~~~~~~~~~~~~i~e~~~~~~~~~n~ll~~~e~~~~~~~~I~~tN~~~~ 161 (177)
T 1jr3_A 107 LLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQK 161 (177)
T ss_dssp HHHHTTSCCSSSSSEEEEEECGGGSCHHHHHHHHHHHHSCCSSEEEEEEESCGGG
T ss_pred HHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHH
T ss_conf 9999852654799869998684649999999999998579867289885587464