HHsearch alignment of GI: 254780804 and MMDB domain: 1jr3_D_212-343
>1jr3_D (D:212-343) DNA polymerase III, delta subunit; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli}
Probab=99.61 E-value=4.6e-15 Score=118.36 Aligned_cols=124 Identities=11% Similarity=0.135 Sum_probs=111.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 11146788876410236999999985311000145899999999999999983025689899998608999976899999
Q gi|254780804|r 216 LYIEEIINATIQGKIYNAIMLADFFLASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQ 295 (352)
Q Consensus 216 ~~if~L~dai~~~~~~~a~~~l~~l~~~g~~~~~il~~L~~~f~~L~~~~~~~~~~g~~~~~~~~~~~~p~~~~~k~~~~ 295 (352)
+++|+|+||++.||..+++..+++++.+|++|..+++.|.++||.++.++... ++.+..++.+..+ +++.+.+.++
T Consensus 1 y~if~l~dai~~~d~~~al~~l~~l~~~g~~~~~il~~L~~~~r~l~~~k~~~--~~~~~~~~~~~~~--i~~~~~~~~~ 76 (132)
T 1jr3_D 1 FTPFHWVDALLMGKSKRALHILQQLRLEGSEPVILLRTLQRELLLLVNLKRQS--AHTPLRALFDKHR--VWQNRRGMMG 76 (132)
T ss_dssp CCHHHHHHHHTTSCHHHHHHHHTSSTTTTCCHHHHHHHHHHHHHHHHHHHTCS--SSSCHHHHHHHHT--CCSSHHHHHH
T ss_pred CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH--CCCCHHHHHHHCC--CCHHHHHHHH
T ss_conf 33899999998268799999999998779957999999999999999999874--4899999998859--9999999999
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHH
Q ss_conf 99864998999999999999999953289-9989999999999999631
Q gi|254780804|r 296 ESLRIWNKNLVRETLHKIDHRIHLARKKK-YLEKNIIFQTILYIAQTAC 343 (352)
Q Consensus 296 ~q~~~~s~~~l~~~l~~L~~~d~~~K~~~-~~~~~il~~~ll~l~~~a~ 343 (352)
+++++|+.+++.+++..|.++|..+|++. .++...++.+++++|+.+.
T Consensus 77 ~~~~~~s~~~L~~~l~~l~~~d~~lK~~~~~~~~~~le~~l~~l~~~~~ 125 (132)
T 1jr3_D 77 EALNRLSQTQLRQAVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHKPL 125 (132)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHHSSCSCHHHHHHHHHHHTTSCCC
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHH
T ss_conf 9997199999999999999999997179999999999999999957165