HHsearch alignment of GI: 254780804 and MMDB domain: 1njg_A_1-185
>1njg_A (A:1-185) DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli}
Probab=95.74 E-value=0.14 Score=29.03 Aligned_cols=115 Identities=8% Similarity=0.108 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCC--------------------CEEEEEEHHHHHCCH
Q ss_conf 887532100101384799956996589999999999733566677--------------------307762088964189
Q gi|254780804|r 8 KFIQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYHDP--------------------FSLVVLNALEIQKNI 67 (352)
Q Consensus 8 ~~~~~~~~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~~--------------------~~~~~~~~~e~~~d~ 67 (352)
+-++..-.+....| .|||||+.---+...+..+.+.+..+.... .............+.
T Consensus 33 ~~l~~~i~~~~~~~-~lLl~GppG~GKt~la~~lA~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (185)
T 1njg_A 33 TALANGLSLGRIHH-AYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDT 111 (185)
T ss_dssp HHHHHHHHHTCCCS-EEEEECSTTSCHHHHHHHHHHHHHCTTCSCSSCCSCSHHHHHHHTTCCSSEEEEETTCGGGHHHH
T ss_pred HHHHHHHHCCCCCE-EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECHHHCCCHHHH
T ss_conf 99999998599870-69888999876899999999984685466667666545899997489861899520420799999
Q ss_pred HHHHHHHHCCCCCCCCEEEEEECCCC-HHHHHHHHHHHHHCCCCCEEEEEEECCCCC
Q ss_conf 99999871788888823999847741-045789889885105656079998526543
Q gi|254780804|r 68 STFWNEINSTSLFSKKKIILIENLST-EKKVLDCLEEIIIKNICNHIIIIKSNEIKK 123 (352)
Q Consensus 68 ~~l~~~~~t~slF~~~klIii~~~~~-~k~~~~~l~~~~~~~~~~~~li~~a~~l~k 123 (352)
..+.+.+...+.-+..+++++.++.. .......+...++.|+.++++|+.+.....
T Consensus 112 ~~~~~~~~~~~~~~~~~v~~~~e~~~~~~~~~~~ll~~~e~~~~~~~~I~ttn~~~~ 168 (185)
T 1njg_A 112 RDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQK 168 (185)
T ss_dssp HHHHHSCCCSCSSSSSEEEEEETGGGSCHHHHHHHHHHHHSCCTTEEEEEEESCGGG
T ss_pred HHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHH
T ss_conf 999999974651489779999780529999999999997667888379996698444