HHsearch alignment of GI: 254780804 and MMDB domain: 1sxj_C_1-168

>1sxj_C (C:1-168) Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ ATPase, DNA polymerase; HET: ATG ADP; 2.85A {Saccharomyces cerevisiae}
Probab=93.52  E-value=0.49  Score=25.43  Aligned_cols=112  Identities=14%  Similarity=0.129  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEE----EHHHHHCCHHHHHHHHHCCCCCCCCE
Q ss_conf             87532100101384799956996589999999999733566677307762----08896418999999871788888823
Q gi|254780804|r    9 FIQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVL----NALEIQKNISTFWNEINSTSLFSKKK   84 (352)
Q Consensus         9 ~~~~~~~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~~~~~~~~----~~~e~~~d~~~l~~~~~t~slF~~~k   84 (352)
                      .++..-++-...|  .||||+..--+...+..+.+.+.............    ...+. .....+.......+..++.+
T Consensus        36 ~l~~~i~~~~~~~--~ll~GppG~GKt~~a~~~a~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  112 (168)
T 1sxj_C           36 TVRKFVDEGKLPH--LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDV-VRNQIKDFASTRQIFSKGFK  112 (168)
T ss_dssp             HHHHHHHTTCCCC--EEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTSCCSHHH-HHTHHHHHHHBCCSSSCSCE
T ss_pred             HHHHHHHCCCCCE--EEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCC-CHHHHHHHHHHHHCCCCCEE
T ss_conf             9999997799986--99889799999999999998740456677436731444686011-02455542000001445527


Q ss_pred             EEEEECCCC-HHHHHHHHHHHHHCCCCCEEEEEEECCCCC
Q ss_conf             999847741-045789889885105656079998526543
Q gi|254780804|r   85 IILIENLST-EKKVLDCLEEIIIKNICNHIIIIKSNEIKK  123 (352)
Q Consensus        85 lIii~~~~~-~k~~~~~l~~~~~~~~~~~~li~~a~~l~k  123 (352)
                      +++++++.. .......+...++.++.++++|+.......
T Consensus       113 viiide~d~~~~~~~~~ll~~le~~~~~~~~I~~tn~~~~  152 (168)
T 1sxj_C          113 LIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHK  152 (168)
T ss_dssp             EEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGG
T ss_pred             EEECHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCC
T ss_conf             9840157777887899999998743500121022464101