HHsearch alignment of GI: 254780804 and MMDB domain: 2chq_A_161-225

>2chq_A (A:161-225) Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A

Probab=97.25  E-value=0.001  Score=43.13  Aligned_cols=63  Identities=17%  Similarity=0.154  Sum_probs=56.0

Q ss_pred             CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC
Q ss_conf             001358898875430256675679999962001235568999999751034443488888775310
Q gi|254780804|r  147 KIHLMDLIEESLLIGQKSISKEAKQILLANLGGDRIASRNELQKLSSYCLEDILITEQHVKDIICD  212 (352)
Q Consensus       147 ~~~l~~~i~~~~~~~g~~i~~~a~~~L~~~~g~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~~  212 (352)
                      ..++...++..++++|++++++++..+++.++||++.+.|-|+-++..   .+.||.++|.++++.
T Consensus         3 ~~~i~~rL~~I~~~E~i~~d~~al~~i~~~s~Gd~R~aln~Lq~~~~~---~~~It~~~v~~~~Gs   65 (65)
T 2chq_A            3 KEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAI---GEVVDADTIYQITAT   65 (65)
T ss_dssp             HHHHHHHHHHHHHTTCCCBCHHHHHHHHHTTTTCHHHHHHHHHHHHHS---SSCBCHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH---CCCCCHHHHHHHHCC
T ss_conf             377899999998852467880288979987278555899999999860---466659999976434