HHsearch results for GI: 254780804 and protein with PDBid: 1iqp_A
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=99.39 E-value=3.1e-09 Score=78.77 Aligned_cols=274 Identities=14% Similarity=0.022 Sum_probs=185.1
Q ss_pred EEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEH---HHHHCCHHHHHHHHHCCCCCC-CCEEEEEECCCCH-HHH
Q ss_conf 79995699658999999999973356667730776208---896418999999871788888-8239998477410-457
Q gi|254780804|r 23 VFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNA---LEIQKNISTFWNEINSTSLFS-KKKIILIENLSTE-KKV 97 (352)
Q Consensus 23 iyLi~G~d~~l~~~~~~~l~k~~~~~~~~~~~~~~~~~---~e~~~d~~~l~~~~~t~slF~-~~klIii~~~~~~-k~~ 97 (352)
-+||||+.---+...+..+.+....+. ..++...+++ ...............+....+ .+++++++++... ...
T Consensus 48 ~lll~Gp~G~GKTtla~~lak~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viiide~~~~~~~~ 126 (327)
T 1iqp_A 48 HLLFAGPPGVGKTTAALALARELFGEN-WRHNFLELNASDERGINVIREKVKEFARTKPIGGASFKIIFLDEADALTQDA 126 (327)
T ss_dssp EEEEESCTTSSHHHHHHHHHHHHHGGG-HHHHEEEEETTCHHHHHTTHHHHHHHHHSCCGGGCSCEEEEEETGGGSCHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCC-CCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHH
T ss_conf 698789899999999999999976401-4777113445455664899999999986312368872699986766465768
Q ss_pred HHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 89889885105656079998526543113566765431121014664420013588988754302566756799999620
Q gi|254780804|r 98 LDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISCYPDNKIHLMDLIEESLLIGQKSISKEAKQILLANL 177 (352)
Q Consensus 98 ~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~~~~~~~~l~~~i~~~~~~~g~~i~~~a~~~L~~~~ 177 (352)
...|...++.++.++++++......+-- ..+ ...+..+.+.+++..++..++...+..++..++++++..++..+
T Consensus 127 ~~~Ll~~le~~~~~~~~i~~~~~~~~i~---~~l--~sr~~~i~~~~~~~~~~~~~l~~i~~~e~~~i~~~~~~~I~~~~ 201 (327)
T 1iqp_A 127 QQALRRTMEMFSSNVRFILSCNYSSKII---EPI--QSRCAIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIA 201 (327)
T ss_dssp HHHHHHHHHHTTTTEEEEEEESCGGGSC---HHH--HHTEEEEECCCCCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEECCCCHHHCC---HHH--HCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
T ss_conf 9999998850577514552368631163---678--46232021256777789999999999839999999999999882
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHH
Q ss_conf 0123556899999975103444348888877531012211146788876410236999999985-311000145899999
Q gi|254780804|r 178 GGDRIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEIINATIQGKIYNAIMLADFFL-ASKMPSHALLHGFLQ 256 (352)
Q Consensus 178 g~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~~~~~~~if~L~dai~~~~~~~a~~~l~~l~-~~g~~~~~il~~L~~ 256 (352)
++|.+.+.+.++....+ .+.++..++....+......+++++..+..++..++.......+ ..|.++..++..+..
T Consensus 202 ~gdlr~~in~Lq~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~~~~~~~~~il~~l~~ 278 (327)
T 1iqp_A 202 EGDMRRAINILQAAAAL---DKKITDENVFMVASRARPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHK 278 (327)
T ss_dssp TTCHHHHHHHHHHHHTT---CSEECHHHHHHHTTCCCHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHC---CCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 99899999999999986---997779999998589999999999999974899999999999999869999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 99999999998302568989999860899997689999999864998999999999999999953289998999999999
Q gi|254780804|r 257 KFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLRIWNKNLVRETLHKIDHRIHLARKKKYLEKNIIFQTIL 336 (352)
Q Consensus 257 ~f~~L~~~~~~~~~~g~~~~~~~~~~~~p~~~~~k~~~~~q~~~~s~~~l~~~l~~L~~~d~~~K~~~~~~~~il~~~ll 336 (352)
. .. ... .+......++..+.++|..+.. +..+..-++.++.
T Consensus 279 ~---------~~-~~~----------------------------~~~~~k~~i~~~i~~~~~~l~~-~~~~~i~le~~l~ 319 (327)
T 1iqp_A 279 E---------VF-NLP----------------------------IEEPKKVLLADKIGEYNFRLVE-GANEIIQLEALLA 319 (327)
T ss_dssp H---------GG-GSS----------------------------SCHHHHHHHHHHHHHHHHHHHT-TCCHHHHHHHHHH
T ss_pred H---------HH-CCC----------------------------CCHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHH
T ss_conf 9---------97-479----------------------------9989999999999999999996-7998999999999
Q ss_pred HHHHHHHC
Q ss_conf 99996310
Q gi|254780804|r 337 YIAQTACK 344 (352)
Q Consensus 337 ~l~~~a~~ 344 (352)
+++...+|
T Consensus 320 ~l~~~~~~ 327 (327)
T 1iqp_A 320 QFTLIGKK 327 (327)
T ss_dssp HHHHHHCC
T ss_pred HHHHHHCC
T ss_conf 99986385