HHsearch results for GI: 254780804 and protein with PDBid: 1jql_B
>1jql_B DNA polymerase III, delta subunit; processivity clamp, clamp loader, DNA replication, AAA+ ATPase, transferase; HET: DNA; 2.50A {Escherichia coli} SCOP: c.37.1.20
Probab=99.79 E-value=1.2e-18 Score=141.16 Aligned_cols=137 Identities=11% Similarity=0.169 Sum_probs=112.0
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHCCCCC
Q ss_conf 97633378875321001013847999569965899999999997335666773077620889641899999987178888
Q gi|254780804|r 1 MATIESHKFIQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNALEIQKNISTFWNEINSTSLF 80 (352)
Q Consensus 1 ~~~i~~~~~~~~~~~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~~~~~~~~~~~e~~~d~~~l~~~~~t~slF 80 (352)
|..|++.++.+.+++++ .++|++||+|.|++++..+.+.+.+..++.++ +...+++.+ .|++.++++++|.|||
T Consensus 1 mm~i~~~~l~~~l~k~l---~~vyll~G~E~~L~~~~~~~i~~~~~~~~~~~-~~~~~~~~~--~~~~~l~~~~~t~~lF 74 (140)
T 1jql_B 1 MIRLYPEQLRAQLNEGL---RAAYLLLGNDPLLLQESQDAVRQVAAAQGFEE-HHTFSIDPN--TDWNAIFSLCQAMSLF 74 (140)
T ss_dssp CEECCGGGHHHHHHHCC---CSEEEEESSCHHHHHHHHHHHHHHHHHTTCCE-EECCCCSTT--CCHHHHHHHHHCCCTT
T ss_pred CCCCCHHHHHHHHHCCC---CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCH-HHHHHCCCC--CCHHHHHHHHHCCCCC
T ss_conf 98579999999996179---85899984839999999999999998779506-566414789--9999999997279987
Q ss_pred CCCEEEEEECCCC--HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHH-HHHHHHCCCC
Q ss_conf 8823999847741--0457898898851056560799985265431135667654-3112101466
Q gi|254780804|r 81 SKKKIILIENLST--EKKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEK-FTSVLAISCY 143 (352)
Q Consensus 81 ~~~klIii~~~~~--~k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~-~~~~~~v~~~ 143 (352)
|++|+|++++... .++..+.|..|+.+|++++++|+.++++++.++-+|++.. .+.+..|+|.
T Consensus 75 s~~rli~i~~~~~~~~k~~~~~L~~~~~~~~~~~~LIi~~~~~~k~~~~~k~~k~l~k~g~~I~Cq 140 (140)
T 1jql_B 75 ASRQTLLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTCQ 140 (140)
T ss_dssp CCCEEEEEECCTTCSCTTHHHHHHHHHHHCCSSCCEEEECSSCCTTGGGSHHHHHHGGGCEEEECC
T ss_pred CCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCEEEECC
T ss_conf 665740221666675566899999997088998589999567672677769999999496588588