HHsearch results for GI: 254780804 and protein with PDBid: 1l8q_A
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, replication initiation; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 2hcb_A*
Probab=97.91 E-value=0.00031 Score=45.64 Aligned_cols=166 Identities=11% Similarity=0.155 Sum_probs=98.7
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHCC------CCCCCCEEEEEECCCC-
Q ss_conf 847999569965899999999997335666773077620889641899999987178------8888823999847741-
Q gi|254780804|r 21 HFVFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNALEIQKNISTFWNEINST------SLFSKKKIILIENLST- 93 (352)
Q Consensus 21 ~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~~~~~~~~~~~e~~~d~~~l~~~~~t~------slF~~~klIii~~~~~- 93 (352)
++ .++||+----+...++.+...+...+ ..+......+...+. ...+..- ..+....++++++...
T Consensus 38 np-l~l~G~~G~GKTHLl~Ai~~~~~~~~---~~v~y~~~~~~~~~~---~~a~~~~~~~~~~~~~~~~dlLiiDDi~~l 110 (324)
T 1l8q_A 38 NP-IFIYGSVGTGKTHLLQAAGNEAKKRG---YRVIYSSADDFAQAM---VEHLKKGTINEFRNMYKSVDLLLLDDVQFL 110 (324)
T ss_dssp SS-EEEECSSSSSHHHHHHHHHHHHHHTT---CCEEEEEHHHHHHHH---HHHHHHTCHHHHHHHHHTCSEEEEECGGGG
T ss_pred CE-EEEECCCCCCHHHHHHHHHHHHHHCC---CCEEEEEHHHHHHHH---HHHHHCCCHHHHHHHHHCCCEEECCCHHHH
T ss_conf 61-89888999989999999999998549---975994499999999---999864878999988512564000306654
Q ss_pred --HHHHHHHHHHHHHCC-CCCEEEEEEECCCCCCHH--HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHH
Q ss_conf --045789889885105-656079998526543113--566765431121014664420013588988754302566756
Q gi|254780804|r 94 --EKKVLDCLEEIIIKN-ICNHIIIIKSNEIKKNNT--LRKIAEKFTSVLAISCYPDNKIHLMDLIEESLLIGQKSISKE 168 (352)
Q Consensus 94 --~k~~~~~l~~~~~~~-~~~~~li~~a~~l~k~~k--l~k~~e~~~~~~~v~~~~~~~~~l~~~i~~~~~~~g~~i~~~ 168 (352)
.....+.+-..+..- ..+..+|+.+......-. .-.+...-..+.++...| +.......++..+...|+.++++
T Consensus 111 ~~~~~~qe~lf~l~n~~~~~~k~iiits~~~P~~l~~~~~~L~SRl~~Gl~v~I~P-d~~~r~~iL~k~a~~~~i~l~~e 189 (324)
T 1l8q_A 111 SGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEIEL-DNKTRFKIIKEKLKEFNLELRKE 189 (324)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTCEEEEEESSCGGGCTTSCHHHHHHHHTSEEEECCC-CHHHHHHHHHHHHHHTTCCCCHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHCCCCHHHHHHHHCCEEEEECC-CHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 15557899999999999870996898569885654132267887864765899688-83999999999998747778789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 799999620012355689999997510
Q gi|254780804|r 169 AKQILLANLGGDRIASRNELQKLSSYC 195 (352)
Q Consensus 169 a~~~L~~~~g~d~~~l~~EleKL~ly~ 195 (352)
++++|++... |.+.+...+..|...+
T Consensus 190 vl~yia~~~~-nvR~Legal~~l~~~a 215 (324)
T 1l8q_A 190 VIDYLLENTK-NVREIEGKIKLIKLKG 215 (324)
T ss_dssp HHHHHHHHCS-SHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCC-CHHHHHHHHHHHHHHH
T ss_conf 9999986589-7888999999999999