HHsearch results for GI: 254780804 and protein with PDBid: 2bjv_A
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=92.99 E-value=0.41 Score=24.91 Aligned_cols=177 Identities=14% Similarity=0.167 Sum_probs=90.9
Q ss_pred EEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCHHHHHHHHH-------------CCCCC--CCCEEEEE
Q ss_conf 9995699658999999999973356667730776208896418999999871-------------78888--88239998
Q gi|254780804|r 24 FIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNALEIQKNISTFWNEIN-------------STSLF--SKKKIILI 88 (352)
Q Consensus 24 yLi~G~d~~l~~~~~~~l~k~~~~~~~~~~~~~~~~~~e~~~d~~~l~~~~~-------------t~slF--~~~klIii 88 (352)
+||+|+.---+...++.+- ........+| ..++...+ +.+.....+. ..++| +..-.+++
T Consensus 32 vlI~GE~GtGK~~lA~~iH-~~s~~~~~~~--~~i~c~~~--~~~~~~~~l~g~~~~~~~~~~~~~~G~le~a~~GtL~l 106 (265)
T 2bjv_A 32 VLIIGERGTGKELIASRLH-YLSSRWQGPF--ISLNCAAL--NENLLDSELFGHEAGAFTGAQKRHPGRFERADGGTLFL 106 (265)
T ss_dssp EEEECCTTSCHHHHHHHHH-HTSTTTTSCE--EEEEGGGS--CHHHHHHHHHCCC---------CCCCHHHHTTTSEEEE
T ss_pred EEEECCCCCCHHHHHHHHH-HHCCCCCCCC--CCCCHHHH--HHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEE
T ss_conf 8988989978999999999-8464657997--34667776--24468999718656776631116888078868988998
Q ss_pred ECCCCH-HHHHHHHHHHHHC----------C-CCCEEEEEEECC-CCC---CHHHH-HHHHH-HHHHHHCCCCCCCCHHH
Q ss_conf 477410-4578988988510----------5-656079998526-543---11356-67654-31121014664420013
Q gi|254780804|r 89 ENLSTE-KKVLDCLEEIIIK----------N-ICNHIIIIKSNE-IKK---NNTLR-KIAEK-FTSVLAISCYPDNKIHL 150 (352)
Q Consensus 89 ~~~~~~-k~~~~~l~~~~~~----------~-~~~~~li~~a~~-l~k---~~kl~-k~~e~-~~~~~~v~~~~~~~~~l 150 (352)
++.... ......|..++.. + ..++.+|+.+.. +.. ...+. .++.. ....+.||--.....++
T Consensus 107 ~~i~~L~~~~Q~~L~~~l~~~~~~r~~~~~~~~~~~rii~ss~~~~~~~~~~~~~~~~L~~~l~~~~i~vPpLreR~eDi 186 (265)
T 2bjv_A 107 DELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVNEGTFRADLLDALAFDVVQLPPLRERESDI 186 (265)
T ss_dssp ESGGGSCHHHHHHHHHHHHHCEECCCCC--CEECCCEEEEEESSCHHHHHHHTSSCHHHHHHHCSEEEECCCGGGCHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHCCEEEECCCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCHHHCCCEEEEECCCCCCCCCCH
T ss_conf 66144999999999998506917977999625665665224566789998808754324330143799818999875479
Q ss_pred HHH----HHHHHHHCCC----CCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 588----9887543025----66756799999620-01235568999999751034443488888
Q gi|254780804|r 151 MDL----IEESLLIGQK----SISKEAKQILLANL-GGDRIASRNELQKLSSYCLEDILITEQHV 206 (352)
Q Consensus 151 ~~~----i~~~~~~~g~----~i~~~a~~~L~~~~-g~d~~~l~~EleKL~ly~~~~~~It~~dI 206 (352)
..+ +.+..++.|. .++++|...|..+- .+|...+.+-++.+++-+. .+.|+.+|+
T Consensus 187 ~~l~~~~l~~~~~~~~~~~~~~ls~~a~~~L~~y~WPGNi~EL~~vi~~~~~~~~-~~~I~~~dl 250 (265)
T 2bjv_A 187 MLMAEYFAIQMCREIKLPLFPGFTERARETLLNYRWPGNIRELKNVVERSVYRHG-TSDYPLDDI 250 (265)
T ss_dssp HHHHHHHHHHHHHHTTCSSCCCBCHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHC-CSSSCBCCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC-CCCCCHHHC
T ss_conf 9999999999999838985455789999999818999689999999999999679-996579984